HHsearch alignment for GI: 254780589 and conserved domain: PRK12472

Probab=97.67  E-value=0.00037  Score=46.07  Aligned_cols=103  Identities=17%  Similarity=0.225  Sum_probs=71.0

Q ss_pred             CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCC
Q ss_conf             75784799998378699998607889668999865213238988701017874750799984012587576521420799
Q gi|254780589|r   47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF  126 (239)
Q Consensus        47 ~~~~pi~Irv~K~e~~Lel~~~~~~g~~~l~ktY~Ic~~sg~lGpK~~eGD~kTPEG~Y~i~~~~~np~S~y~ls~~i~Y  126 (239)
T Consensus        52 ~~gePi~aiVSi~~Q~vt~YDa~--G---~~~~apVST--G~~G-------~~TP~GVFsiiqK~k~HrSniY~----~A  113 (512)
T PRK12472         52 EAGEPIMAIVSIKSQQVTLYDAD--G---WILRAPVST--GTTG-------RETPAGVFAIVEKDKDHHSTMYD----DA  113 (512)
T ss_pred             CCCCCEEEEEEECCCEEEEECCC--C---EEEECCCCC--CCCC-------CCCCCEEEEEEECCCHHHHCCCC----CC
T ss_conf             68996599998513268998168--7---289655347--8777-------87775345664215202203347----88


Q ss_pred             CCHHHHHCCCCCCCEEECCCC-----CCCCCEEECHHHHHHHHHHHHH
Q ss_conf             898899729998826871677-----8667187064669999999999
Q gi|254780589|r  127 PNEFDKAHNRTGADLMIHGEC-----ASAGCYAMNNKQMQEIYAIVRD  169 (239)
Q Consensus       127 PN~~Dr~~grtG~~I~IHG~~-----~S~GC~amtd~~i~EIy~~v~~  169 (239)
T Consensus       114 ~MP~M--QRiTWsGiALH~G~lPGYpASHGCvRmP~~FA~~lf~~T~~  159 (512)
T PRK12472        114 WMPNM--QRITWNGVALHGGPLPGYAASHGCVRMPYGFAEKLFDKTRI  159 (512)
T ss_pred             CCCCE--EEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             87500--01212122321677899867676242765899987400026