BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780589|ref|YP_003065002.1| hypothetical protein
CLIBASIA_02380 [Candidatus Liberibacter asiaticus str. psy62]
(239 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780589|ref|YP_003065002.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040266|gb|ACT57062.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 239
Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE
Sbjct: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL
Sbjct: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ
Sbjct: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI
Sbjct: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
>gi|315121782|ref|YP_004062271.1| hypothetical protein CKC_00160 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495184|gb|ADR51783.1| hypothetical protein CKC_00160 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 212
Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 154/211 (72%), Positives = 188/211 (89%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
++DKAE+PL ++L+ M+KK+TSP+HP++IRIFK ENILEIWK DA+Y+LLK+YKICA
Sbjct: 1 MVDKAEYPLPKSLVRYMEKKKTSPYHPSLIRIFKEENILEIWKYTYDAQYILLKQYKICA 60
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPKIETGD Q+PEGFYYIGWNNLNPNSKY+LSINIGFPNEFD+ HNRTG D+MIH
Sbjct: 61 WSGIIGPKIETGDRQSPEGFYYIGWNNLNPNSKYYLSINIGFPNEFDREHNRTGTDIMIH 120
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G C+SAGCYAMN+KQ+ EIYAI+RDSLRG MQS+IQ+QAFPFRMT +NM+ YQ +P+Y F
Sbjct: 121 GGCSSAGCYAMNDKQILEIYAIIRDSLRGKMQSYIQVQAFPFRMTQENMKRYQTHPDYFF 180
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
WN+LK+G+DYFE NH EP +Q++NKQYVF K
Sbjct: 181 WNILKIGYDYFENNHLEPIVQVLNKQYVFLK 211
>gi|209551176|ref|YP_002283093.1| hypothetical protein Rleg2_3600 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536932|gb|ACI56867.1| protein of unknown function DUF949 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 409
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 159/241 (65%), Gaps = 9/241 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M RY + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239
Query: 233 F 233
F
Sbjct: 240 F 240
>gi|86359412|ref|YP_471304.1| hypothetical protein RHE_CH03829 [Rhizobium etli CFN 42]
gi|86283514|gb|ABC92577.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 410
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L GC+ + + +K E PL +++ +M K P +IRIFK E +
Sbjct: 12 MALALAGCNDTLETAQVDLSKVKNKVEQPLPPHILNAMAAKGMDRNSPIMIRIFKEEGAM 71
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 72 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANLNPNSKYYLAIN 131
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D + RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G QS +Q+QA
Sbjct: 132 TGFPNRYDAVNGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QSTVQLQA 190
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ +PNY FW MLK+G+D FE + P + + K+YVF
Sbjct: 191 FPFRMTAENMVKHRLDPNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYVF 240
>gi|190893666|ref|YP_001980208.1| hypothetical protein RHECIAT_CH0004100 [Rhizobium etli CIAT 652]
gi|190698945|gb|ACE93030.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 408
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L GC+ + + +K E PL +++ +M K P +IRIFK E +
Sbjct: 12 IALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAM 71
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 72 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAIN 131
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QA
Sbjct: 132 TGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQA 190
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YVF
Sbjct: 191 FPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF 240
>gi|327188715|gb|EGE55914.1| hypothetical protein RHECNPAF_800017 [Rhizobium etli CNPAF512]
Length = 408
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L GC+ + + +K E PL +++ +M K P +IRIFK E +
Sbjct: 12 IALALTGCNDALETAQIDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAM 71
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 72 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAIN 131
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QA
Sbjct: 132 TGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQA 190
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YVF
Sbjct: 191 FPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF 240
>gi|116254089|ref|YP_769927.1| hypothetical protein RL4356 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258737|emb|CAK09843.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 430
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L+GC+ + + +K E PL +++ M K P +IRIFK E +
Sbjct: 34 MALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPIMIRIFKEEGAM 93
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 94 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANLNPNSKYYLAIN 153
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QA
Sbjct: 154 TGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQA 212
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YVF
Sbjct: 213 FPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF 262
>gi|241206579|ref|YP_002977675.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860469|gb|ACS58136.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 408
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L+GC+ + + +K E PL +++ M K P +IRIFK E +
Sbjct: 12 MALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPIMIRIFKEEGAM 71
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 72 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAIN 131
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D A+ R+G+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QA
Sbjct: 132 TGFPNRYDAANGRSGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQA 190
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YVF
Sbjct: 191 FPFRMTAENMVKHRLDGNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYVF 240
>gi|218462567|ref|ZP_03502658.1| hypothetical protein RetlK5_25260 [Rhizobium etli Kim 5]
Length = 265
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 12 LFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ + L GC+ + + +K E PL +++ +M K P +IRIFK E +
Sbjct: 12 IALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAM 71
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NLNPNSKY+L+IN
Sbjct: 72 EIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAIN 131
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QA
Sbjct: 132 TGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQA 190
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YVF
Sbjct: 191 FPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKRPPEVNVCEKKYVF 240
>gi|158424938|ref|YP_001526230.1| hypothetical protein AZC_3314 [Azorhizobium caulinodans ORS 571]
gi|158331827|dbj|BAF89312.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 425
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 142/206 (68%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
KA PLS +I M +K +P +P +IR+FK E LE+WK D Y LLK Y IC WSG
Sbjct: 38 KANQPLSPKMISLMSEKDMAPQNPILIRVFKEEAELEVWKAKNDGSYALLKTYPICRWSG 97
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK++ GD QAPEGFY I +NPNS Y+LSIN GFPN FDK+ RTG LMIHG+C
Sbjct: 98 ELGPKVKIGDRQAPEGFYMITPGLMNPNSSYYLSINTGFPNAFDKSWGRTGEFLMIHGDC 157
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+SAGCYAM ++Q+ EI+A+ R++ G Q QIQA PFRMT +N+ ++NNPN +FW
Sbjct: 158 SSAGCYAMTDEQIAEIFALAREAFAGG-QRAFQIQAMPFRMTPQNLARHRNNPNMAFWRN 216
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G+D+FE EP + + N+QYVF
Sbjct: 217 LKQGYDHFEVTKHEPKVNVCNRQYVF 242
>gi|306843460|ref|ZP_07476061.1| lipoprotein [Brucella sp. BO1]
gi|306276151|gb|EFM57851.1| lipoprotein [Brucella sp. BO1]
Length = 403
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|254718078|ref|ZP_05179889.1| hypothetical protein Bru83_00779 [Brucella sp. 83/13]
gi|265983029|ref|ZP_06095764.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839702|ref|ZP_07472504.1| lipoprotein [Brucella sp. NF 2653]
gi|264661621|gb|EEZ31882.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405162|gb|EFM61439.1| lipoprotein [Brucella sp. NF 2653]
Length = 403
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|148560248|ref|YP_001259845.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|148371505|gb|ABQ61484.1| putative lipoprotein [Brucella ovis ATCC 25840]
Length = 403
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQIAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|225626415|ref|ZP_03784454.1| lipoprotein [Brucella ceti str. Cudo]
gi|225853467|ref|YP_002733700.1| hypothetical protein BMEA_A2093 [Brucella melitensis ATCC 23457]
gi|254700667|ref|ZP_05162495.1| hypothetical protein Bsuib55_07398 [Brucella suis bv. 5 str. 513]
gi|254713560|ref|ZP_05175371.1| hypothetical protein BcetM6_09439 [Brucella ceti M644/93/1]
gi|254716085|ref|ZP_05177896.1| hypothetical protein BcetM_06566 [Brucella ceti M13/05/1]
gi|256060001|ref|ZP_05450183.1| hypothetical protein Bneo5_06551 [Brucella neotomae 5K33]
gi|256112359|ref|ZP_05453280.1| hypothetical protein Bmelb3E_06696 [Brucella melitensis bv. 3 str.
Ether]
gi|256158530|ref|ZP_05456424.1| hypothetical protein BcetM4_06709 [Brucella ceti M490/95/1]
gi|256253944|ref|ZP_05459480.1| hypothetical protein BcetB_06546 [Brucella ceti B1/94]
gi|256263053|ref|ZP_05465585.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370432|ref|YP_003107943.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260169444|ref|ZP_05756255.1| hypothetical protein BruF5_14024 [Brucella sp. F5/99]
gi|261217853|ref|ZP_05932134.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221084|ref|ZP_05935365.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261321297|ref|ZP_05960494.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323975|ref|ZP_05963172.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751175|ref|ZP_05994884.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261758969|ref|ZP_06002678.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99]
gi|265993794|ref|ZP_06106351.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997044|ref|ZP_06109601.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|225618072|gb|EEH15115.1| lipoprotein [Brucella ceti str. Cudo]
gi|225641832|gb|ACO01746.1| protein of unknown function DUF949 [Brucella melitensis ATCC 23457]
gi|256000595|gb|ACU48994.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260919668|gb|EEX86321.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260922942|gb|EEX89510.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293987|gb|EEX97483.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261299955|gb|EEY03452.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261738953|gb|EEY26949.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99]
gi|261740928|gb|EEY28854.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262551512|gb|EEZ07502.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262764775|gb|EEZ10696.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263092929|gb|EEZ17104.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410029|gb|ADZ67094.1| putative lipoprotein [Brucella melitensis M28]
gi|326539745|gb|ADZ87960.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 403
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|23502881|ref|NP_699008.1| putative lipoprotein [Brucella suis 1330]
gi|161619949|ref|YP_001593836.1| hypothetical protein BCAN_A2079 [Brucella canis ATCC 23365]
gi|163844053|ref|YP_001628457.1| hypothetical protein BSUIS_A1874 [Brucella suis ATCC 23445]
gi|254705037|ref|ZP_05166865.1| hypothetical protein Bsuib36_14174 [Brucella suis bv. 3 str. 686]
gi|260567495|ref|ZP_05837965.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40]
gi|261755738|ref|ZP_05999447.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|306842842|ref|ZP_07475482.1| lipoprotein [Brucella sp. BO2]
gi|23348910|gb|AAN30923.1| lipoprotein, putative [Brucella suis 1330]
gi|161336760|gb|ABX63065.1| protein of unknown function DUF949 [Brucella canis ATCC 23365]
gi|163674776|gb|ABY38887.1| protein of unknown function DUF949 [Brucella suis ATCC 23445]
gi|260157013|gb|EEW92093.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40]
gi|261745491|gb|EEY33417.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|306287036|gb|EFM58547.1| lipoprotein [Brucella sp. BO2]
Length = 403
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|62290878|ref|YP_222671.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82700790|ref|YP_415364.1| hypothetical protein BAB1_2034 [Brucella melitensis biovar Abortus
2308]
gi|189025093|ref|YP_001935861.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19]
gi|237816386|ref|ZP_04595379.1| lipoprotein [Brucella abortus str. 2308 A]
gi|254690167|ref|ZP_05153421.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 6
str. 870]
gi|254694658|ref|ZP_05156486.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 3
str. Tulya]
gi|254696283|ref|ZP_05158111.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 2
str. 86/8/59]
gi|254731200|ref|ZP_05189778.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 4
str. 292]
gi|256258421|ref|ZP_05463957.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 9
str. C68]
gi|260546140|ref|ZP_05821880.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038]
gi|260755706|ref|ZP_05868054.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758931|ref|ZP_05871279.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760653|ref|ZP_05872996.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884733|ref|ZP_05896347.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214982|ref|ZP_05929263.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297247263|ref|ZP_06930981.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|62197010|gb|AAX75310.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82616891|emb|CAJ11990.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella melitensis
biovar Abortus 2308]
gi|189020665|gb|ACD73387.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19]
gi|237788453|gb|EEP62668.1| lipoprotein [Brucella abortus str. 2308 A]
gi|260096247|gb|EEW80123.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038]
gi|260669249|gb|EEX56189.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671085|gb|EEX57906.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675814|gb|EEX62635.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874261|gb|EEX81330.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916589|gb|EEX83450.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297174432|gb|EFH33779.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
Length = 403
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|294851264|ref|ZP_06791937.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026]
gi|294819853|gb|EFG36852.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026]
Length = 403
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANERTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|239833077|ref|ZP_04681406.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825344|gb|EEQ96912.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 417
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 148/223 (66%), Gaps = 5/223 (2%)
Query: 14 IFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
L GC S S+ D +AE PL E ++ M+ K + P ++RIFK E +LE+WK+
Sbjct: 15 TLLAGCQGS-SVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIFKEEGVLEVWKQKN 73
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y + Y+IC WSG GPK GD QAPEGFY + +NPNS Y+L+ NIGFPN +
Sbjct: 74 NGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPNSNYYLAFNIGFPNAY 133
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQAFPFRMT+
Sbjct: 134 DRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QRDFQIQAFPFRMTA 192
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
NM Y+++PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 193 ANMARYKSDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|17986322|ref|NP_538956.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M]
gi|256045634|ref|ZP_05448512.1| hypothetical protein Bmelb1R_14110 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260562938|ref|ZP_05833424.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str.
16M]
gi|265992057|ref|ZP_06104614.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17981907|gb|AAL51220.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M]
gi|260152954|gb|EEW88046.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str.
16M]
gi|263003123|gb|EEZ15416.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 403
Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 150/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMPRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1]
gi|49239092|emb|CAF28395.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1]
Length = 247
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 151/234 (64%), Gaps = 4/234 (1%)
Query: 8 LLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+LFA I L C S+ K E PL + M P+ P ++R FK ENI EI
Sbjct: 11 VLFATGI-LTACEGRLPASIRAKVEQPLPREVQNRMVLYNVDPYAPIMMRFFKEENIAEI 69
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
WK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP SKY+LS NIG
Sbjct: 70 WKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTISASQMNPYSKYYLSFNIG 129
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
FPN +D+AH RTG++LM+HG C SAGCY+M++K M +IYA RD+ RG Q Q+QAFP
Sbjct: 130 FPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFRGG-QRKFQLQAFP 188
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
FRMT NM + ++P+Y FW MLK G+D FEKN + P + + K+YVF G+T+
Sbjct: 189 FRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYEKRYVFNTGKTV 242
>gi|15966436|ref|NP_386789.1| lipoprotein [Sinorhizobium meliloti 1021]
gi|307300526|ref|ZP_07580306.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
gi|307318391|ref|ZP_07597826.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
gi|15075707|emb|CAC47262.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
gi|306896073|gb|EFN26824.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
gi|306904692|gb|EFN35276.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
Length = 480
Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S+ +K E+ LS ++ M++ P ++RIFK E LE+WK N + LLK YKIC
Sbjct: 31 SVKNKTEYQLSSKMVSKMRELGMQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKIC 90
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
AWSG GPK++ GD QAPEGFY + N +NPNS Y+L+IN G+PN +DKA+ RTG LMI
Sbjct: 91 AWSGKLGPKMKEGDRQAPEGFYPLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLMI 150
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG C+SAGCY+M N+Q+ EI+A+ RD+ +G +S +Q+QAFPFRMT++NM +++NPN
Sbjct: 151 HGACSSAGCYSMTNEQIIEIFALARDAFKGGQES-VQLQAFPFRMTAENMARHRDNPNIE 209
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK G+D FE + P + + ++YVF
Sbjct: 210 FWKMLKAGYDQFEVTKRPPAVNVCERKYVF 239
>gi|153008240|ref|YP_001369455.1| hypothetical protein Oant_0905 [Ochrobactrum anthropi ATCC 49188]
gi|151560128|gb|ABS13626.1| protein of unknown function DUF949 [Ochrobactrum anthropi ATCC
49188]
Length = 412
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 5/222 (2%)
Query: 15 FLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
L GC S S+ D +AE PL E ++ M+ K + P ++RIFK E LE+WK+ +
Sbjct: 16 LLAGCQGS-SVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIFKEEGTLEVWKQKNN 74
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131
+Y + Y IC WSG GPK GD QAPEGFY + +NPNS Y+LS NIGFPN +D
Sbjct: 75 GKYDQIASYDICKWSGKLGPKYIEGDRQAPEGFYNVRPAQMNPNSSYYLSFNIGFPNAYD 134
Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQAFPFRMT+
Sbjct: 135 RANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QRDFQIQAFPFRMTAA 193
Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
NM Y+++PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 194 NMARYKSDPNYSFWKMLKQGYDSFEVTKVPPKVDVCEKRYVF 235
>gi|110635389|ref|YP_675597.1| hypothetical protein Meso_3060 [Mesorhizobium sp. BNC1]
gi|110286373|gb|ABG64432.1| protein of unknown function DUF949 [Chelativorans sp. BNC1]
Length = 439
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Query: 1 MTNRYNILLFALFIFLNGCHHS-RSLIDKA-EHPLSENLIISMQKKRTSPFHPTVIRIFK 58
M +R+ + L GC S L KA E L + ++ K S P ++R+FK
Sbjct: 10 MKSRFACAVLLPAFILVGCSGSLEDLAPKAAERKLPPEVTEIIKAKGMSTNAPIMMRVFK 69
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E +LE+WK+ D Y L+K Y+IC WSG GPK GD QAPEGFY I +NPNS Y
Sbjct: 70 EEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAPEGFYTIRPQQMNPNSSY 129
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
LS NIGFPN +D+A+ RTG LM+HG C+SAGCY+M ++Q++EIYA RD+ RG Q
Sbjct: 130 HLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVEEIYAFARDAFRGG-QEA 188
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q QAFPFRMT++NM Y+N+PNY FW MLK G+D+FE P + + +YVF
Sbjct: 189 FQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPPKVDVCEARYVF 243
>gi|227823257|ref|YP_002827229.1| putative periplasmic protein, putative exported protein
[Sinorhizobium fredii NGR234]
gi|227342258|gb|ACP26476.1| putative periplasmic protein, putative exported protein
[Sinorhizobium fredii NGR234]
Length = 469
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 157/234 (67%), Gaps = 8/234 (3%)
Query: 7 ILLFALFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
++ A+ L GC + S+ +K E+ LS ++ M + P ++RIFK
Sbjct: 7 VITTAIAAGLAGCTNETLDSVNLSSVKNKTEYQLSSKMVSKMSELGMQKTSPILLRIFKE 66
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E LE+WK N + + LLK YKICAWSG GPK++ GD QAPEGFY + + +NPNS Y+
Sbjct: 67 EGTLEVWKANTSSRFQLLKSYKICAWSGKLGPKVKEGDRQAPEGFYPLYPHQMNPNSNYY 126
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+IN GFPN +DKA+ R+G LMIHG C+S+GCY+M ++Q+ EI+A+ RD+ +G +S +
Sbjct: 127 LAINTGFPNAYDKANGRSGTHLMIHGACSSSGCYSMTDEQIIEIFALARDAFKGGQES-V 185
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+QAFP+RMT++NM +++NPN FW MLK+G+D FE + P + + ++YVF
Sbjct: 186 QLQAFPYRMTAENMARHRDNPNIEFWKMLKVGYDQFEVTKRPPQVNVCERKYVF 239
>gi|110346930|ref|YP_665748.1| hypothetical protein Meso_4116 [Mesorhizobium sp. BNC1]
gi|110283041|gb|ABG61101.1| protein of unknown function DUF949 [Chelativorans sp. BNC1]
Length = 335
Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 152/226 (67%), Gaps = 2/226 (0%)
Query: 9 LFALFIFLNGCHHSRSLID-KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ AL +FL+ C + +D KA P+ L+ M +K SP P ++RIFK E+ LE+WK
Sbjct: 11 IAALALFLSACVSTVLDVDGKATRPIPAALVADMSRKSMSPSAPVLVRIFKQESELEVWK 70
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R+ ++ LLK Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y+LS N+G+P
Sbjct: 71 RDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEGFYHVSARMLNPNSQYYLSFNLGYP 130
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N + A TG LM+HG C+S+GC+A+ ++ + EIYA+ R++L+G Q Q+QAFPFR
Sbjct: 131 NRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEIYAVAREALKGG-QGSFQVQAFPFR 189
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NM +N+PN++FW+ LKLG+D FE ++P + +YVF
Sbjct: 190 MTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKVSYCEGRYVF 235
>gi|254707445|ref|ZP_05169273.1| hypothetical protein BpinM_10862 [Brucella pinnipedialis
M163/99/10]
gi|254709013|ref|ZP_05170824.1| hypothetical protein BpinB_01867 [Brucella pinnipedialis B2/94]
gi|256030538|ref|ZP_05444152.1| hypothetical protein BpinM2_07792 [Brucella pinnipedialis
M292/94/1]
gi|261314933|ref|ZP_05954130.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316511|ref|ZP_05955708.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|265987585|ref|ZP_06100142.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|261295734|gb|EEX99230.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303959|gb|EEY07456.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|264659782|gb|EEZ30043.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 403
Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 150/230 (65%), Gaps = 6/230 (2%)
Query: 6 NILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+IL AL L GC S L +AE PL + ++ MQ K + P ++RIFK E +L
Sbjct: 10 SILATAL---LAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIFKEEGVL 66
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
E+WK+ + +Y + Y+IC WSG GPK GD QAPEGF + +NP+S Y+L+ N
Sbjct: 67 EVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFCTVRPAQMNPHSNYYLAFN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
IGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q QIQA
Sbjct: 127 IGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QREFQIQA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 186 FPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVF 235
>gi|154244467|ref|YP_001415425.1| hypothetical protein Xaut_0510 [Xanthobacter autotrophicus Py2]
gi|154158552|gb|ABS65768.1| protein of unknown function DUF949 [Xanthobacter autotrophicus Py2]
Length = 450
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 144/216 (66%), Gaps = 2/216 (0%)
Query: 19 CHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
C+ + S + A PL+ ++ + +K SP P ++RIFK E LE+WK D + LL
Sbjct: 33 CNQTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEVWKATSDGSFALL 92
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y IC WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+GFPN FD+++ RT
Sbjct: 93 KTYPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRT 152
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G LM+HG+C+SAGCYAM ++Q+ EI+++ R+S G Q Q+QA+PFRMT KN+ ++
Sbjct: 153 GEFLMVHGDCSSAGCYAMTDEQISEIFSLARESFAGG-QRAFQVQAYPFRMTPKNLARHR 211
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
NNPN +FW LK G+D+FE Q P + + + YVF
Sbjct: 212 NNPNMAFWRNLKQGYDHFEVTKQVPKVNVCGRSYVF 247
>gi|115522169|ref|YP_779080.1| hypothetical protein RPE_0139 [Rhodopseudomonas palustris BisA53]
gi|115516116|gb|ABJ04100.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisA53]
Length = 481
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 148/234 (63%), Gaps = 4/234 (1%)
Query: 8 LLFALFIFLNGCHHSR-SLID--KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
++ A + L GC+ SL + KA P+S LI MQ K P ++R+FK E LE
Sbjct: 14 VVLAAGVALAGCNSDEISLANNAKANQPVSPKLIAEMQSKDMDLQAPMLVRLFKQEAELE 73
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK+ +Y LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N
Sbjct: 74 VWKQTRSGQYALLKTYPICRWSGDLGPKVREGDRQAPEGFYSISPGQMNPQSAYYLSFNT 133
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Q+QA+
Sbjct: 134 GYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFGG-QRAFQLQAY 192
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PF+MT NM +++NPN FW M+K G+D+FE QEP ++ +YVF T
Sbjct: 193 PFKMTPANMARHRSNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEARYVFDPAPT 246
>gi|209883239|ref|YP_002287096.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5]
gi|209871435|gb|ACI91231.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5]
Length = 483
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
Query: 10 FALFIFLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
A + L GC+ SRS KA P+ E L+ M+ K P ++R+FK E LE+W
Sbjct: 16 LATSVLLAGCNGDTLSRSA--KANKPIPEKLLSDMEAKNMDKGSPMLVRLFKQEAELEVW 73
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N+G+
Sbjct: 74 KQDRSGRFALLKTYPICRWSGDLGPKIREGDRQAPEGFYSITPAQMNPASAYYLSFNMGY 133
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q+ Q+QA+PF
Sbjct: 134 PNAYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFGG-QTAFQVQAYPF 192
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
RMT +NM +++NPN +FW MLK G+D FE EP + + K+YVF
Sbjct: 193 RMTPQNMARHRDNPNMAFWRMLKEGNDIFEVTRTEPKVDVCEKKYVF 239
>gi|150397767|ref|YP_001328234.1| hypothetical protein Smed_2569 [Sinorhizobium medicae WSM419]
gi|150029282|gb|ABR61399.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419]
Length = 481
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S+ +K E+ LS ++ M++ P ++RIFK E LE+WK N + LLK YKIC
Sbjct: 39 SVKNKTEYQLSGKMVSKMRELGMQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKIC 98
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
AWSG GPK++ GD QAPEGFY + LNPNS Y+L+IN G+PN +DKA+ RTG LMI
Sbjct: 99 AWSGKLGPKVKEGDRQAPEGFYPLYPRQLNPNSSYYLAINTGYPNTYDKANGRTGTHLMI 158
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG C+S+GCY+M ++Q+ EI+A+ RD+ +G +S +Q+QAFPFRMT++NM +++NPN
Sbjct: 159 HGACSSSGCYSMTDEQIIEIFALARDAFKGGQES-VQLQAFPFRMTAENMARHRDNPNID 217
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK+G+D FE + P + + ++YVF
Sbjct: 218 FWKMLKVGYDQFEVTKRPPAVNVCERKYVF 247
>gi|49474796|ref|YP_032838.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse]
gi|49240300|emb|CAF26782.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse]
Length = 247
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 152/240 (63%), Gaps = 6/240 (2%)
Query: 3 NRY--NILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
NR+ +LFA+ I L C S+ K E PL + + M P+ P ++R FK
Sbjct: 4 NRFFATCVLFAIGI-LTACKERLPASIRAKVEQPLPQEVQNKMVLHNIDPYAPIMMRFFK 62
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
EN+ EIWK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP SKY
Sbjct: 63 EENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTISADQMNPYSKY 122
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS NIGFPN +D+ H RTG++LM+HG C S GCYAM +K M +IYA RD+ RG Q
Sbjct: 123 YLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFARDAFRGG-QKE 181
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Q+QAFPFRMT+ NM + +P+Y FW MLK G+D+FE+N + P + + K+YVF +T
Sbjct: 182 FQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYKKRYVFSTNKT 241
>gi|240851368|ref|YP_002972771.1| putative lipoprotein [Bartonella grahamii as4aup]
gi|240268491|gb|ACS52079.1| putative lipoprotein [Bartonella grahamii as4aup]
Length = 249
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
Query: 8 LLFALFIFLN-GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+LF + I G S+ K E PL + + M P+ P V+R FK EN+ E+W
Sbjct: 11 VLFVMGILAACGGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRFFKEENLAEVW 70
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP SKY+LS NIGF
Sbjct: 71 KQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTISANQMNPYSKYYLSFNIGF 130
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q Q+QAFPF
Sbjct: 131 PNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKGG-QREFQLQAFPF 189
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
RMT NM + N+P+Y FW MLK G+D+FEKN Q P +++ K+YVF
Sbjct: 190 RMTEDNMLRHSNDPHYQFWVMLKKGYDFFEKNRQPPTVEVYGKRYVF 236
>gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110]
gi|27348439|dbj|BAC45457.1| blr0192 [Bradyrhizobium japonicum USDA 110]
Length = 526
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 148/236 (62%), Gaps = 4/236 (1%)
Query: 6 NILLFALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
++ L + L GC + + KA P+ L+ +M +K P ++R+FK E
Sbjct: 17 SVALLTASVLLAGCDTDQVSLATNAKANQPVPPKLLAAMVEKDMDLQSPILVRLFKQEAE 76
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
LE+WK+ + ++ LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS
Sbjct: 77 LEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPGQMNPQSAYYLSF 136
Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
N G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Q+Q
Sbjct: 137 NTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFGG-QKAFQLQ 195
Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
A+PF+MT NM ++NNPN FW M+K G+D+FE QEP + K+YVF +T
Sbjct: 196 AYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVDFCEKKYVFDAAKT 251
>gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255]
gi|74419459|gb|ABA03658.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
Length = 492
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 152/242 (62%), Gaps = 10/242 (4%)
Query: 1 MTNRY---NILLFALFI---FLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHP 51
M NR I+ A+ + L GC+ + + KA P+S L+ +M K P
Sbjct: 1 MINRSIARTIMTSAVLMGSALLAGCNTDDASLASNAKANRPVSPKLVAAMTAKDMELQSP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+IR+FK E LE+WK++ ++ LLK Y IC WSG GPK GD QAPEGFY I
Sbjct: 61 ILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGPKTREGDRQAPEGFYSITPAQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
+NP S Y+LS N G+PNEFDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S
Sbjct: 121 MNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESF 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
G Q Q+QA+PFRMT+ N+ ++NNPN FW M+K G+D+FE QEP + ++Y
Sbjct: 181 FGG-QRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCERKY 239
Query: 232 VF 233
VF
Sbjct: 240 VF 241
>gi|299132837|ref|ZP_07026032.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2]
gi|298592974|gb|EFI53174.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2]
Length = 475
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 2/225 (0%)
Query: 10 FALFIFLNGCH-HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
A L GC+ + + KA P+ E L+ M+ K P ++R+FK E+ LE+WK+
Sbjct: 16 LATGTLLAGCNGENLAQSAKATKPIPEKLLAEMEAKNMDKGSPILVRLFKQESELEVWKQ 75
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+ + LLK Y IC WSG GPKI GD Q PEGFY I +NP S Y+LS N+G+PN
Sbjct: 76 DRSGRFALLKTYAICRWSGDLGPKIREGDRQTPEGFYSITPGQMNPASAYYLSFNMGYPN 135
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q+ Q+QA+PFRM
Sbjct: 136 AYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFGG-QTAFQVQAYPFRM 194
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
T +NM Y++NPN FW MLK G+D FE EP + + +K+YVF
Sbjct: 195 TPQNMAKYRDNPNMPFWRMLKEGNDIFEVTKTEPKVDVCDKKYVF 239
>gi|217979292|ref|YP_002363439.1| protein of unknown function DUF949 [Methylocella silvestris BL2]
gi|217504668|gb|ACK52077.1| protein of unknown function DUF949 [Methylocella silvestris BL2]
Length = 415
Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 140/206 (67%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
K+E P+ + M+ + T+P P ++R FK E+ +E+WKRN YV LK + IC WSG
Sbjct: 46 KSEQPIPAATLALMEARDTTPDAPILMRAFKKESEIEVWKRNRSGRYVFLKSFPICRWSG 105
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK+ GD Q+PEGFY +G +NPNS Y+LS + GFPN +DKAH +G+ LM+HG C
Sbjct: 106 KLGPKVAQGDRQSPEGFYSVGPRQMNPNSAYYLSFDTGFPNAYDKAHGASGSALMVHGTC 165
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+SAGCYAM +K + EI+A+ R++LRG Q+ Q QA+PF+MT++N+ Y+ +PN FW
Sbjct: 166 SSAGCYAMTDKGVAEIFALAREALRGG-QNAFQFQAYPFKMTAQNLARYRADPNIGFWRQ 224
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +E + ++N +YVF
Sbjct: 225 LKEGFDRFEATGEELGVGVVNGRYVF 250
>gi|170742903|ref|YP_001771558.1| hypothetical protein M446_4794 [Methylobacterium sp. 4-46]
gi|168197177|gb|ACA19124.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46]
Length = 518
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 1/203 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ + + M +K SP P +IR FK E+ +E+WKR D Y LLK + IC WSG G
Sbjct: 36 QPIPQKTVALMSQKGMSPGDPILIRAFKKESEMEVWKRGSDGRYALLKTFPICRWSGQLG 95
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+NRTG LM+HG C+SA
Sbjct: 96 PKIRQGDRQAPEGFYPITPGQMNPNSSYYLSFDTGFPNAFDRANNRTGTYLMVHGTCSSA 155
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM ++ + EIYAI R++ G Q Q Q++PFRM ++N+ Y+N+PN FW LK
Sbjct: 156 GCFAMTDEAIAEIYAIAREAFAGG-QRAFQFQSYPFRMNAENLAKYRNDPNMPFWKNLKE 214
Query: 211 GHDYFEKNHQEPFIQIINKQYVF 233
G DYFE H+EP + + +YVF
Sbjct: 215 GSDYFEALHEEPRVGVCGTRYVF 237
>gi|90420211|ref|ZP_01228119.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335545|gb|EAS49295.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 378
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 29 AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
AE PL L+ +++ P ++R++K E+ LE+WK+ D Y LLK Y+ICAWSG
Sbjct: 75 AEAPLPAALVQAIKSNGMGVKSPILVRLYKEESDLEVWKQKTDGTYALLKTYEICAWSGK 134
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA 148
GPK + GD QAPEGFY + LNPNS Y L++N+G+PN +D+A+ RTG+ LMIHG C
Sbjct: 135 LGPKKQEGDRQAPEGFYTVTPAQLNPNSNYHLALNMGYPNTYDRANGRTGSHLMIHGSCN 194
Query: 149 SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208
S+GCYAM+++Q+QEIY++ R S G Q QIQA+PFRMT KNM ++N+ +Y FW ML
Sbjct: 195 SSGCYAMDDEQVQEIYSLARHSFEGG-QRAFQIQAYPFRMTPKNMARHRNSEHYDFWKML 253
Query: 209 KLGHDYFEKNHQEPFIQIINKQYVF 233
K G DYFE Q+P + + +++YVF
Sbjct: 254 KKGSDYFEMTRQQPNVGVCDRRYVF 278
>gi|304394155|ref|ZP_07376078.1| lipoprotein [Ahrensia sp. R2A130]
gi|303293595|gb|EFL87972.1| lipoprotein [Ahrensia sp. R2A130]
Length = 345
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 154/231 (66%), Gaps = 5/231 (2%)
Query: 7 ILLFALFI---FLNGCHHSRSLID-KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
+LL +L + L+GC + + +D KA P+ + L+ M+ K + P ++RIFK EN
Sbjct: 1 MLLASLAVTGLVLSGCQDNLAGLDTKASVPVPQKLVRQMKAKNMATNAPIMVRIFKQENT 60
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
LEIWK+ + Y +L +Y+IC WSG GPK + GD QAPEGFY + +NP S+Y L+
Sbjct: 61 LEIWKKTRNGRYAMLADYEICKWSGKLGPKFKEGDRQAPEGFYNVTPALMNPRSQYHLAF 120
Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
N+GFPN +D++H RTG LM+HG C+SAGCYAM ++Q++ IYA+ RD+ +G Q QIQ
Sbjct: 121 NMGFPNAYDRSHGRTGTHLMVHGACSSAGCYAMTDQQVEVIYALARDAFKGG-QKGFQIQ 179
Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
AFPFRMT +NM ++N ++++W MLK GHD+FE P + + K+Y F
Sbjct: 180 AFPFRMTEENMVANRDNQHFAYWQMLKKGHDHFEITKVPPKVDVCEKRYEF 230
>gi|332716420|ref|YP_004443886.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3]
gi|325063105|gb|ADY66795.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3]
Length = 475
Score = 234 bits (596), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 152/234 (64%), Gaps = 9/234 (3%)
Query: 8 LLFALFIFLNGCHHSRSLID--------KAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
LL + L+GC+ + ++ K ++PLS +++ + KK P +IRIFK
Sbjct: 51 LLACTALILSGCNDTLETVERDVSHVKNKVDYPLSPSILAEIDKKNMDRTSPIMIRIFKE 110
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E LEIWK D + + EY+ICAWSG GPK++ GD QAPEGFY + +LNPNSKY+
Sbjct: 111 EGALEIWKAKRDNRFDKIAEYQICAWSGKLGPKVKEGDRQAPEGFYNLTPAHLNPNSKYY 170
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY RD+ +G Q +
Sbjct: 171 LAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARDAFKGG-QKTV 229
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P + + K+YVF
Sbjct: 230 QLQAFPFRMTAENMARHRQSEHLDFWKMLKVGYDNFEVTKRPPEVNVCEKKYVF 283
>gi|319781235|ref|YP_004140711.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167123|gb|ADV10661.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 432
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 148/232 (63%), Gaps = 5/232 (2%)
Query: 4 RYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R IL+ AL + GC++S + +A PL + ++ M+ K + RIFK E
Sbjct: 7 RTGILIAALGVA--GCNNSSMKDFAPEANKPLPDKILADMRAKGMVRTSSVMARIFKEEG 64
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY + +NP S Y LS
Sbjct: 65 KLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPAQMNPRSNYHLS 124
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ RTG++LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ QI
Sbjct: 125 FNIGYPNAYDRANGRTGSNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG-QTEFQI 183
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
QAFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF
Sbjct: 184 QAFPFRMTAANMARYRNDPNYDFWKMLKVGYDNFEITKVPPKVDVCEKRYVF 235
>gi|298292760|ref|YP_003694699.1| hypothetical protein Snov_2792 [Starkeya novella DSM 506]
gi|296929271|gb|ADH90080.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 593
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
K+ P + LI RTSP V+RIFK E+ LE+WK+ +Y LLK Y IC WSG
Sbjct: 48 KSLSPQTVALIGEKGMSRTSPI---VVRIFKEESELEVWKQTTSGDYALLKTYPICRWSG 104
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK++ GD QAPEGFY + +NPNS+Y+LS ++G+PN FD++ RTGA+LM+HG+C
Sbjct: 105 ELGPKVKEGDRQAPEGFYTVTPGQMNPNSQYYLSFDLGYPNAFDRSLGRTGANLMVHGDC 164
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
S GCYAM ++Q+QE++A+ R+S G +S Q+QA+PFRMT++NM ++NNPN +FW M
Sbjct: 165 TSRGCYAMTDEQVQEVFALGRESFMGGQRS-FQVQAYPFRMTAENMVRHRNNPNLAFWKM 223
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
+K G D FE P + K+YVF
Sbjct: 224 IKEGSDTFEVTKAPPKVDFCAKRYVF 249
>gi|316931931|ref|YP_004106913.1| putative transcriptional regulatory protein [Rhodopseudomonas
palustris DX-1]
gi|315599645|gb|ADU42180.1| putative exported protein; putative transcriptional regulatory
protein at C-terminal [Rhodopseudomonas palustris DX-1]
Length = 477
Score = 233 bits (594), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 143/227 (62%), Gaps = 4/227 (1%)
Query: 10 FALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
A L GC+ + + KA P+ L+ +MQ+K P ++R+FK E LE+W
Sbjct: 16 LATMPLLAGCNSDQMALATNAKASQPVPPKLVAAMQEKNMDLQSPILVRLFKQEAELEVW 75
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N G+
Sbjct: 76 KQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGY 135
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PF
Sbjct: 136 PNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFGG-QRAFQLQAYPF 194
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+MT N ++NNPN FW MLK G+D+FE QEP + ++YVF
Sbjct: 195 KMTPANFAKHRNNPNMPFWKMLKQGYDHFEVTRQEPKVDFCEQKYVF 241
>gi|163869344|ref|YP_001610600.1| hypothetical protein Btr_2657 [Bartonella tribocorum CIP 105476]
gi|161019047|emb|CAK02605.1| hypothetical protein BT_2657 [Bartonella tribocorum CIP 105476]
Length = 249
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 151/231 (65%), Gaps = 4/231 (1%)
Query: 8 LLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+LF + I L C S+ K E PL + + M P+ P V+R FK EN+ E+
Sbjct: 11 VLFVIGI-LTACEGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRFFKEENVAEV 69
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
WK++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP SKY+LS NIG
Sbjct: 70 WKQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTITANQMNPYSKYYLSFNIG 129
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q Q+QAFP
Sbjct: 130 YPNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKGG-QRAFQLQAFP 188
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
FRMT NM + N+P+Y FW MLK G+D+FE+N Q P +++ K+Y+F +G
Sbjct: 189 FRMTEDNMLRHGNDPHYPFWVMLKKGYDFFEENRQPPIVEVYGKRYIFNRG 239
>gi|90422051|ref|YP_530421.1| hypothetical protein RPC_0527 [Rhodopseudomonas palustris BisB18]
gi|90104065|gb|ABD86102.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisB18]
Length = 477
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 145/229 (63%), Gaps = 4/229 (1%)
Query: 8 LLFALFIFLNGCHHSR-SLID--KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ A + L GC+ SL + KA P+ L+ MQ K P ++R+FK E LE
Sbjct: 14 VALATGVMLAGCNSDEISLANNAKANQPVPPKLVAEMQTKDMDLQAPMLVRLFKQEAELE 73
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK+ ++ LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N
Sbjct: 74 VWKQTRSGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYNITPAQMNPQSAYYLSFNT 133
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Q+QA+
Sbjct: 134 GYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFGG-QRAFQLQAY 192
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
PF+MT NM ++NNPN FW M+K G+D+FE QEP ++ +YVF
Sbjct: 193 PFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEAKYVF 241
>gi|222149988|ref|YP_002550945.1| hypothetical protein Avi_4058 [Agrobacterium vitis S4]
gi|221736970|gb|ACM37933.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 445
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
+ +K E PL ++ S++ K P IRIFK E +LEIWK D + + +Y+ICA
Sbjct: 35 VSNKVEQPLPPEILASLKAKGMERNSPIAIRIFKEEGVLEIWKAKTDGRFEKIADYQICA 94
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPK + GD QAPEGFY + NLNP SKY+L+IN GFPN++D +NR G +LMIH
Sbjct: 95 WSGKLGPKEKEGDRQAPEGFYALTPANLNPYSKYYLAINTGFPNKYDAVNNRNGTNLMIH 154
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G C+S+GCY+M + Q+ EIYA RD+ RG Q+ +Q+QAFPFRMT++NM ++ + + F
Sbjct: 155 GACSSSGCYSMTDAQILEIYAFARDAFRGGQQT-VQLQAFPFRMTAENMARHRYSTHMPF 213
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
W MLK G+D FE Q P + + +K+YVF
Sbjct: 214 WQMLKAGYDQFEVTKQPPQVGVCDKKYVF 242
>gi|121602349|ref|YP_988380.1| putative lipoprotein [Bartonella bacilliformis KC583]
gi|120614526|gb|ABM45127.1| putative lipoprotein [Bartonella bacilliformis KC583]
Length = 247
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 150/235 (63%), Gaps = 4/235 (1%)
Query: 1 MTNRYNILLFALFI--FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
M NR L+F L + L C + K+E PL +N++ M K + P ++R FK
Sbjct: 2 MLNR-CFLVFLLLVTGILAACQGKFARHHKSEQPLPKNILNKMAKFNIDQYAPIMMRFFK 60
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
ENI EIWK+N + +VL+ Y IC WSG GPK GD QAPEGFY + N +NP S Y
Sbjct: 61 EENIAEIWKQNREGRFVLITHYSICKWSGKLGPKYREGDYQAPEGFYMVRPNQMNPRSNY 120
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS NIGFPN +D+ + RTG+ LM+HG CASAGCY+MN+K M +IYA RD+ RG Q
Sbjct: 121 YLSFNIGFPNLYDQVNGRTGSYLMVHGGCASAGCYSMNDKNMAQIYAFARDAFRGG-QRG 179
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+ AFPF MT NM ++ +P+Y FW MLK G+D+FEK + P I++ K+Y+F
Sbjct: 180 FSLHAFPFHMTDANMARHRASPHYPFWKMLKEGYDFFEKYRKLPVIEVYEKRYIF 234
>gi|85713798|ref|ZP_01044788.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A]
gi|85699702|gb|EAQ37569.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A]
Length = 491
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 148/237 (62%), Gaps = 6/237 (2%)
Query: 2 TNRYNILLFALF--IFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRI 56
T R + L AL L GC+ + + KA P+ L+ +M K P +IR+
Sbjct: 6 TARAIMTLAALTGGTLLAGCNTDDASLASNAKANRPVPPKLVAAMTAKDMELQSPILIRL 65
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK E LE+WK++ ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S
Sbjct: 66 FKQEAELEVWKQDRSGKFALLKIYPICRWSGDLGPKTREGDRQAPEGFYSITPAQMNPRS 125
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
Y+LS N G+PNEFDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q
Sbjct: 126 SYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESFFGG-Q 184
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+QA+PFRMT+ N+ ++NNPN FW M+K G+D+FE QEP + +YVF
Sbjct: 185 RAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCEHKYVF 241
>gi|218662493|ref|ZP_03518423.1| hypothetical protein RetlI_25155 [Rhizobium etli IE4771]
Length = 214
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100
M K P +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QA
Sbjct: 1 MSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQA 60
Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
PEGFY + NLNPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+
Sbjct: 61 PEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQV 120
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQ 220
EIYA RD+ +G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE +
Sbjct: 121 LEIYAFARDAFKGG-QATVQLQAFPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKR 179
Query: 221 EPFIQIINKQYVF 233
P + + K+YVF
Sbjct: 180 PPEVNVCEKKYVF 192
>gi|150376335|ref|YP_001312931.1| hypothetical protein Smed_4193 [Sinorhizobium medicae WSM419]
gi|150030882|gb|ABR62998.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419]
Length = 364
Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 150/228 (65%), Gaps = 4/228 (1%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHP--LSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
L + FL+GC + L D ++ P LS+ ++ M KK+ SP P ++RIFK E+ LE+
Sbjct: 38 LALSAAAFLSGCL-AMGLYDLSKAPPQLSKKVLAEMAKKKMSPNSPVLVRIFKKESELEV 96
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
WK + Y L K Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y++S N+G
Sbjct: 97 WKADASGTYALFKTYPMCRWSGKLGPKKKDGDRQAPEGFYHVSARMLNPNSQYYVSFNLG 156
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN + A TG LM+HG C+SAGCYAM ++ + EIYAIV+ +L Q H Q+QA+P
Sbjct: 157 YPNRLESALGYTGEALMVHGACSSAGCYAMTDRGVGEIYAIVQRALAAG-QKHFQVQAYP 215
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FRMT++NM L++ +P+ +FW LK G+D F + ++P + + +YVF
Sbjct: 216 FRMTTENMALHKGDPSMAFWKTLKQGYDAFAFSRRQPKVSVCGGRYVF 263
>gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009]
gi|39647432|emb|CAE25953.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 491
Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 143/227 (62%), Gaps = 4/227 (1%)
Query: 10 FALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
A L GC+ + + KA P+S L+ +MQ+K P ++R+FK E LE+W
Sbjct: 29 LATMPLLAGCNSDQMALATNAKANQPVSPKLVAAMQEKNMDLQSPILVRLFKQEAELEVW 88
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N G+
Sbjct: 89 KQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGY 148
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PF
Sbjct: 149 PNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFGG-QRAFQLQAYPF 207
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+MT N ++NNPN FW MLK G+D+FE QEP + +YVF
Sbjct: 208 KMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVF 254
>gi|148258745|ref|YP_001243330.1| transcriptional regulator [Bradyrhizobium sp. BTAi1]
gi|146410918|gb|ABQ39424.1| putative exported protein of unknown function with transcriptiona
regulatory protein domain (C-term) [Bradyrhizobium sp.
BTAi1]
Length = 494
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 142/220 (64%), Gaps = 4/220 (1%)
Query: 17 NGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
GC+ + + KA P+ L+ ++ +K P ++R+FK E LE+WK++ +
Sbjct: 23 TGCNSDQVALATSAKANQPVPPKLVATIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGK 82
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
+ LLK Y IC WSG GPK+ GD QAPEGFY I + +NP S Y+LS N G+PN FDKA
Sbjct: 83 FALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKA 142
Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193
RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S G Q Q QA+PFRMT NM
Sbjct: 143 LGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESFFGG-QRAFQFQAYPFRMTPMNM 201
Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
++NNPN FW M+K G+D+FE QEP + K+YVF
Sbjct: 202 ARHRNNPNMPFWRMIKEGYDHFEVTRQEPKVDFCEKKYVF 241
>gi|163759951|ref|ZP_02167035.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43]
gi|162282909|gb|EDQ33196.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43]
Length = 398
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 150/223 (67%), Gaps = 2/223 (0%)
Query: 12 LFIFLNGCHHS-RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
L + L GC + S+ +K EHPL L+ M+ S P ++RIFK E +LE+WK+
Sbjct: 3 LVVGLVGCQDALDSVSNKVEHPLPSKLVNKMKANDMSTRSPIMMRIFKEEGVLEVWKQKG 62
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ Y ++ Y+IC WSG GPK + GD QAPEG+Y I +NPNS Y+LS N+GFPN +
Sbjct: 63 NGRYDIIAAYEICKWSGVLGPKFKEGDRQAPEGYYRIYPAQMNPNSSYYLSFNMGFPNSY 122
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D++HNRTG++LM+HG C+SAGCY+M ++Q+ EIY RD+ +G Q + ++A PFRMT
Sbjct: 123 DRSHNRTGSNLMVHGACSSAGCYSMTDEQVLEIYGFARDAFKGG-QEYFLVEALPFRMTP 181
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+NM ++++ ++ FW MLK G+D+FE + P +++ + YVF
Sbjct: 182 ENMARHRDSEHFEFWKMLKTGYDHFELTKRPPKVEVCERSYVF 224
>gi|146337733|ref|YP_001202781.1| putative exported protein transcriptiona regulatory protein at
C-terminal [Bradyrhizobium sp. ORS278]
gi|146190539|emb|CAL74541.1| conserved hypothetical protein; putative exported protein; putative
transcriptiona regulatory protein at C-terminal
[Bradyrhizobium sp. ORS278]
Length = 501
Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 17 NGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
GC+ + + KA P+ L+ ++ +K P ++R+FK E LE+WK++ +
Sbjct: 35 TGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGK 94
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
+ LLK Y IC WSG GPK+ GD QAPEGFY I + +NP S Y+LS N G+PN FDKA
Sbjct: 95 FALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKA 154
Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193
RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S G Q Q QA+PFRMT NM
Sbjct: 155 LGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESFFGG-QRAFQFQAYPFRMTPVNM 213
Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
++NNPN FW M+K G+D FE QEP + K+YVF
Sbjct: 214 ARHRNNPNMPFWRMIKEGYDAFEVTRQEPKVDFCEKKYVF 253
>gi|114705348|ref|ZP_01438256.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi
HTCC2506]
gi|114540133|gb|EAU43253.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi
HTCC2506]
Length = 329
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 146/226 (64%), Gaps = 4/226 (1%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L ALF C ++ L AE PL L+ ++ P ++R+FK E+ LE+WK
Sbjct: 12 LATALFT-ATSCKYADLL--PAEAPLPAALVAQIRANSMGVNSPMLVRLFKEESELEVWK 68
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ D Y LK Y ICAWSG GPK GD QAPEGFY + LNPNS Y L+IN+G+P
Sbjct: 69 QRTDGTYAHLKTYPICAWSGKLGPKFAEGDRQAPEGFYNVNPTQLNPNSSYHLAINMGYP 128
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+A+ RTG+ LMIHG C S+GCYAM++ Q+QEIY + R S G Q + QIQA+PFR
Sbjct: 129 NTYDRANGRTGSHLMIHGSCNSSGCYAMDDVQVQEIYGLARHSFEGG-QRNFQIQAYPFR 187
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NM + N+ +Y+FW MLK G DYFE+ + P + + +++Y+F
Sbjct: 188 MTPQNMARHSNSEHYAFWTMLKKGSDYFEQTRKPPHVGVCDRRYIF 233
>gi|192288940|ref|YP_001989545.1| hypothetical protein Rpal_0510 [Rhodopseudomonas palustris TIE-1]
gi|192282689|gb|ACE99069.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
TIE-1]
Length = 478
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 142/227 (62%), Gaps = 4/227 (1%)
Query: 10 FALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
A L GC+ + + KA P+ L+ +MQ+K P ++R+FK E LE+W
Sbjct: 16 LATMPLLAGCNSDQMALATNAKANQPVPPKLVAAMQEKNMDLQSPILVRLFKQEAELEVW 75
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N G+
Sbjct: 76 KQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGY 135
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PF
Sbjct: 136 PNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFGG-QRAFQLQAYPF 194
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+MT N ++NNPN FW MLK G+D+FE QEP + +YVF
Sbjct: 195 KMTPANFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVF 241
>gi|319899485|ref|YP_004159582.1| hypothetical protein BARCL_1352 [Bartonella clarridgeiae 73]
gi|319403453|emb|CBI77024.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 231
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 137/210 (65%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S K E PL + + M + P ++R FK ENI EIWK+N +VL+ Y IC
Sbjct: 10 SFRAKIEQPLPQEVFNKMAMYDIDQYAPIMMRFFKEENIAEIWKQNRSGVFVLVISYNIC 69
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
WSG GPK GD QAPEGFY I N +NP SKY+LS NIGFPN +D+ H RTG+ +M+
Sbjct: 70 KWSGQLGPKYREGDFQAPEGFYTIQANQMNPYSKYYLSFNIGFPNLYDRIHGRTGSYIMV 129
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG C+S GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ + NP+Y
Sbjct: 130 HGACSSVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDANMQRHHANPHYK 188
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK G+D+FE N + P I + +K+Y+F
Sbjct: 189 FWKMLKEGYDFFEINRKPPRISVYDKRYIF 218
>gi|118592084|ref|ZP_01549478.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614]
gi|118435380|gb|EAV42027.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614]
Length = 424
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+LL + + G S + +KA+ P+S ++ M S P +IRIFK E+ LE+W
Sbjct: 32 LLLAGVLVACQGDEFS-AGPNKAQLPVSASIKRKMNDLNMSSSSPIMIRIFKEESALEVW 90
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K+ +Y LL E++IC WSG GPK + GD QAPEGFY I +NPNS Y L+ N+G+
Sbjct: 91 KQTRTGKYQLLDEFEICKWSGELGPKFKEGDRQAPEGFYEITPALMNPNSSYHLAFNLGY 150
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G +S Q+QAFPF
Sbjct: 151 PNSYDRAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGGQRS-FQVQAFPF 209
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
RMT +NM ++++ + FW MLK G+D+FE P I + K+YVF
Sbjct: 210 RMTPENMARHRDSEHMEFWQMLKTGYDHFEVTQTPPQISVCEKKYVF 256
>gi|254472222|ref|ZP_05085622.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958505|gb|EEA93705.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 389
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
C + +K + P+S++L M+ K P ++R+FK E+ LE+WK+ EY LL+
Sbjct: 28 CQGTEFGAEKHQQPVSKSLSNRMKSKDMELKSPIMVRLFKQESELEVWKQTKSGEYALLE 87
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
+ IC WSG GPK + GD QAPEGFY + +NP S Y+LS N+GFPN+FD+AH+RTG
Sbjct: 88 TFDICKWSGKLGPKFKEGDRQAPEGFYEVTPGLMNPFSSYYLSFNLGFPNKFDRAHDRTG 147
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
++LM+HG C+S GCYAM ++Q+ +IYA+ RDS G Q Q+QAFPFRMT +NM +
Sbjct: 148 SNLMVHGACSSRGCYAMTDEQIADIYALGRDSFLGG-QRKFQVQAFPFRMTPENMAKNAS 206
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+ +Y FW MLK G+D+FE + P I++ +K+YVF
Sbjct: 207 SEHYEFWRMLKRGYDHFEVTKRPPAIEVCDKKYVF 241
>gi|92116107|ref|YP_575836.1| hypothetical protein Nham_0486 [Nitrobacter hamburgensis X14]
gi|91799001|gb|ABE61376.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14]
Length = 502
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 144/228 (63%), Gaps = 4/228 (1%)
Query: 9 LFALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+ A FL GC+ + + + KA P+ L+ +M +K P +IR+FK E LE+
Sbjct: 30 VLASGAFLAGCNGNDASLASNAKANQPVPPKLVAAMTEKDMELQSPILIRLFKQEAELEV 89
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
WK+N ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S Y+LS N G
Sbjct: 90 WKQNRSGKFALLKTYPICRWSGDLGPKTREGDRQAPEGFYSISPAQMNPRSAYYLSFNTG 149
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN FDK+ RTG++LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q QA+P
Sbjct: 150 YPNAFDKSLGRTGSELMVHGDCSSRGCYAMTDEQIAEIYALGRESFFGG-QHAFQFQAYP 208
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
F MT N+ ++NNPN FW M+K G D+FE HQ P ++ +YVF
Sbjct: 209 FHMTPVNLAKHRNNPNMPFWKMIKEGSDHFEVTHQAPKVEFCEHKYVF 256
>gi|86747657|ref|YP_484153.1| hypothetical protein RPB_0531 [Rhodopseudomonas palustris HaA2]
gi|86570685|gb|ABD05242.1| Protein of unknown function DUF949 [Rhodopseudomonas palustris
HaA2]
Length = 485
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
KA P+ L+ +MQ K P ++R+FK E LE+WK++ Y LLK Y IC WSG
Sbjct: 37 KANQPVPPKLVAAMQDKNMDLQSPILVRLFKQEAELEVWKQDRSGVYALLKTYPICRWSG 96
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPKI GD QAPEGFY I +NP S Y+LS N G+PN FDK+ RTG+ LM+HG+C
Sbjct: 97 DLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDC 156
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PF+MT N ++NNPN FW M
Sbjct: 157 SSRGCYAMTDEQIAEIYALGRESFFGG-QRAFQLQAYPFKMTPVNFAKHRNNPNMPFWRM 215
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G+D+FE QEP + ++YVF
Sbjct: 216 LKQGYDHFEVTRQEPKVDFCEQKYVF 241
>gi|260461662|ref|ZP_05809909.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259032732|gb|EEW33996.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 432
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 147/232 (63%), Gaps = 5/232 (2%)
Query: 4 RYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R +L+ ++ I GC+ S + +A PL + ++ M+ K + RIFK E
Sbjct: 7 RTGVLVASIAIA--GCNDSSMKDFAPEANKPLPDKILADMKAKGMVRTSSVMARIFKEEG 64
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY + + +NP S Y LS
Sbjct: 65 KLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLS 124
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIGFPN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ Q+
Sbjct: 125 FNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG-QTEFQV 183
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+AFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF
Sbjct: 184 EAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEITKVPPKVDVCEKRYVF 235
>gi|319407839|emb|CBI81492.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 231
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 137/210 (65%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S K E L ++ M + P ++R FK +NI EIWK+N +VL+ Y IC
Sbjct: 10 SFKAKIEQSLPREILNKMAMYDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFVLVVSYGIC 69
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H RTG+ LM+
Sbjct: 70 KWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHGRTGSYLMV 129
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ + NP+Y
Sbjct: 130 HGACASVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDANMQRHYTNPHYE 188
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK G+D+FEKN + P I + +K+YVF
Sbjct: 189 FWMMLKEGYDFFEKNRKPPKITVYDKRYVF 218
>gi|170748277|ref|YP_001754537.1| hypothetical protein Mrad2831_1859 [Methylobacterium radiotolerans
JCM 2831]
gi|170654799|gb|ACB23854.1| protein of unknown function DUF949 [Methylobacterium radiotolerans
JCM 2831]
Length = 504
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 1/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P++ + MQ K P P +IR FK E +EIWKR D Y L+K Y IC WSG GP
Sbjct: 40 PIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDGRYALMKTYPICRWSGQLGP 99
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K GD QAPEGFY I +NPNS Y+LS + GFPN D+A+ RTG LM+HG C+SAG
Sbjct: 100 KTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAG 159
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM + + EIYA+ RD+ G +S Q Q++PFRMT++NM ++N+PN +FW LK G
Sbjct: 160 CFAMTDATIAEIYAVARDAFIGGQRS-FQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEG 218
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
DYFE H+EP + +YVF
Sbjct: 219 SDYFEALHEEPKVGQCGTKYVF 240
>gi|182677537|ref|YP_001831683.1| hypothetical protein Bind_0542 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633420|gb|ACB94194.1| protein of unknown function DUF949 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 407
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 140/207 (67%), Gaps = 1/207 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
K E P+ + M+ + T+ P +IR +K E LEIWK+ + +VLLK + IC WS
Sbjct: 32 SKGETPIPGATLALMRARDTTAEAPILIRTYKKEAELEIWKQARNGRFVLLKTFPICRWS 91
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK + GD QAPEGFY++G +NPNS Y+LS ++G+PN +DKAH +G+ +M+HG
Sbjct: 92 GQLGPKSQQGDRQAPEGFYWVGPKQMNPNSAYYLSFDVGYPNAYDKAHGGSGSYVMVHGT 151
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+SAGC+AM +K + EIYAI R++LRG Q+ Q QA+PFRMT++NM Y+ + N +FW
Sbjct: 152 CSSAGCFAMTDKGVGEIYAIAREALRGGQQA-FQFQAYPFRMTAQNMAKYRLDANIAFWR 210
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +EP + + + +YVF
Sbjct: 211 QLKEGSDRFEATGEEPLVSVASGRYVF 237
>gi|159185697|ref|NP_357274.2| hypothetical protein Atu3332 [Agrobacterium tumefaciens str. C58]
gi|159140831|gb|AAK90059.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 328
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
+ K LS ++ M K P P ++RIFK E+ LE+WK + Y LLK Y +C W
Sbjct: 22 VKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELEVWKVDKTGNYALLKAYPMCRW 81
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK++TGD QAPEGFY++ LNPNS+Y++S N+G+PN + A TG LM+HG
Sbjct: 82 SGKLGPKMKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHG 141
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C+S+GCYAM ++Q+ EIYAIV +L+G Q Q+QA+PFRM+++NM ++++PN FW
Sbjct: 142 ACSSSGCYAMTDQQVGEIYAIVARALQGG-QDRFQVQAYPFRMSARNMVAHRDDPNMPFW 200
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G+DYFE ++P + + ++YVF
Sbjct: 201 KTLKEGYDYFEVTRRQPKVSVCGRRYVF 228
>gi|222087383|ref|YP_002545920.1| hypothetical protein Arad_4240 [Agrobacterium radiobacter K84]
gi|221724831|gb|ACM27987.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 434
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 156/241 (64%), Gaps = 9/241 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--RSLID------KAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + ID K E PL + ++ M KK P
Sbjct: 1 MRIRHLAYMSLMALALAGCNDALDTASIDLSKVKNKVEQPLPDRILADMTKKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EI K N + + ++ Y ICAWSG GPK++ GD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGTMEILKANQNNRFEVIASYSICAWSGRLGPKVKEGDRQAPEGFYNLTPANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ R+G +LMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRSGNNLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q IQ++AFPFRMT++NM ++ + N FW MLK+G+D FE + P +++ K+YV
Sbjct: 181 GG-QKTIQLEAFPFRMTAENMVKHRLSSNIEFWKMLKVGYDNFEVTKRPPEVEVCEKKYV 239
Query: 233 F 233
F
Sbjct: 240 F 240
>gi|220925727|ref|YP_002501029.1| hypothetical protein Mnod_5898 [Methylobacterium nodulans ORS 2060]
gi|219950334|gb|ACL60726.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 378
Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 136/202 (67%), Gaps = 1/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
PL + M + T+P P ++R +K E+ +E+WKR D +VLLK + IC WSG GP
Sbjct: 38 PLPATTLALMTARNTTPGAPILMRAYKKESEIEVWKRAADGRFVLLKSFPICRWSGQLGP 97
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K++ GD QAPEGFY + +NPNS+Y+LS ++G+PN +D+AH TG+ LM+HG C+SAG
Sbjct: 98 KLKAGDRQAPEGFYTVRPQQMNPNSRYYLSFDVGYPNAYDRAHGGTGSALMVHGTCSSAG 157
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM ++Q+ EI+A+ R++ G Q+ Q QAFPFRM ++N+ ++ +PN +FW LK G
Sbjct: 158 CFAMTDRQVGEIFALAREAFAGG-QAAFQFQAFPFRMNAENLARHRQDPNIAFWRQLKEG 216
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
D FE +EP + + +Y F
Sbjct: 217 SDRFEATGREPLVSVAAGRYGF 238
>gi|220924463|ref|YP_002499765.1| hypothetical protein Mnod_4595 [Methylobacterium nodulans ORS 2060]
gi|219949070|gb|ACL59462.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 524
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 132/203 (65%), Gaps = 1/203 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ + + M K S P +IR +K E+ +E+WKR D Y LLK + IC WSG G
Sbjct: 37 QPIPQKTLALMSTKGMSAGDPILIRAYKKESEMEVWKRGSDGRYALLKTFPICRWSGQLG 96
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+ RTG LM+HG C+SA
Sbjct: 97 PKIRQGDRQAPEGFYTITPGQMNPNSSYYLSFDTGFPNAFDRANGRTGTYLMVHGTCSSA 156
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM ++ + EIYAI R++ G Q Q Q++PFRMT++N+ Y+N+PN FW LK
Sbjct: 157 GCFAMTDEAIAEIYAIAREAFAGG-QRGFQFQSYPFRMTAQNVAKYRNDPNMPFWKNLKE 215
Query: 211 GHDYFEKNHQEPFIQIINKQYVF 233
G DYFE +EP + + +YVF
Sbjct: 216 GSDYFEALREEPKVGVCGTRYVF 238
>gi|217976362|ref|YP_002360509.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
gi|217501738|gb|ACK49147.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
Length = 449
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 18 GCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
GC + S+ +A P+ + M++K T+P P +IR +K E+ LE+WK D +Y
Sbjct: 26 GCEDAGLNSISARANAPVPAETVALMKEKGTTPDAPVLIRTYKKESELEVWKMKADGKYA 85
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LLK Y +C WSG GPK GD Q PEGFY I + PNS Y+L+ N+G+PN +D+A
Sbjct: 86 LLKTYPVCRWSGQLGPKTREGDRQVPEGFYSITPAQMKPNSAYYLAFNVGYPNAYDRALG 145
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
R G +M+HG C+SAGC++M + Q+ EIYA+VRD G Q IQ+Q++PFRMT++NM
Sbjct: 146 RDGGAIMVHGICSSAGCFSMTDPQIGEIYALVRDGFSGG-QREIQMQSYPFRMTAENMAK 204
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Y+ +PN FW LK G D FE Q+ + + +K+YVF
Sbjct: 205 YRADPNIGFWKQLKEGSDNFEVTKQQVAVGVCSKRYVF 242
>gi|319406363|emb|CBI80004.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 231
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S K L ++ M + P ++R FK +NI EIWK+N +VL+ Y IC
Sbjct: 10 SFKAKIAQSLPREILDKMAIHDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFVLVVSYDIC 69
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H RTG+ LM+
Sbjct: 70 KWSGQLGPKYREGDLQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHGRTGSYLMV 129
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ + +P+Y
Sbjct: 130 HGACASVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDVNMQRHHMSPHYE 188
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK G+D+FE+N + P I + NK+YVF
Sbjct: 189 FWMMLKEGYDFFERNRKPPKITVYNKRYVF 218
>gi|332716121|ref|YP_004443587.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3]
gi|325062806|gb|ADY66496.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3]
Length = 351
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 1/208 (0%)
Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
+ K LS ++ M K P P ++RIFK E+ LE+WK + Y LLK Y +C W
Sbjct: 45 VKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELEVWKIDKTGNYALLKTYPMCRW 104
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK +TGD QAPEGFY++ LNPNS+Y++S N+G+PN + A TG LM+HG
Sbjct: 105 SGKLGPKTKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNLGYPNRLESALGYTGEALMVHG 164
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C+S+GCYAM ++Q+ EIYA+V +L+G Q Q+QA+PFRM+++NM +++PN FW
Sbjct: 165 ACSSSGCYAMTDQQVGEIYAVVARALQGG-QDRFQVQAYPFRMSARNMVANRDDPNMPFW 223
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G+DYFE ++P + + ++YVF
Sbjct: 224 KTLKEGYDYFEVTRRQPKVSVCGRRYVF 251
>gi|91974778|ref|YP_567437.1| hypothetical protein RPD_0298 [Rhodopseudomonas palustris BisB5]
gi|91681234|gb|ABE37536.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisB5]
Length = 487
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 133/206 (64%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
KA P+ L+ MQ K P ++R+FK E LE+WK++ + LLK Y IC WSG
Sbjct: 37 KANQPVPPKLVAEMQAKNMDLQSPILVRLFKQEAELEVWKQDRTGVFALLKSYPICRWSG 96
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK+ GD QAPEGFY I +NP S Y+LS N G+PN FDK+ RTG+ LM+HG+C
Sbjct: 97 DLGPKVREGDRQAPEGFYAISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDC 156
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+S GCYAM ++Q+ EIY++ R+S G Q Q+QA+PF+MT N ++NNPN FW M
Sbjct: 157 SSRGCYAMTDEQIAEIYSLGRESFFGG-QRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKM 215
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G+D+FE QEP + +YVF
Sbjct: 216 LKEGYDHFEVTRQEPKVDFCEHKYVF 241
>gi|319404880|emb|CBI78481.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 1/210 (0%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S K E L ++ M + P ++R FK +NI EIWK+N +VL+ Y IC
Sbjct: 10 SFKAKIEQSLPREILNKMAMNDIDQYAPIMMRFFKKDNIAEIWKQNRSGVFVLVVSYDIC 69
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H RTG+ LM+
Sbjct: 70 KWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHGRTGSYLMV 129
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS 203
HG C+S GCY+MN++ M +IYA RD+ +G Q Q+ AFPFRMT NMQ + +P+Y
Sbjct: 130 HGACSSVGCYSMNDRNMAQIYAFARDAFKGG-QKEFQLHAFPFRMTDANMQRHYTSPHYE 188
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FW MLK G+D+FE N + P I + +K+YVF
Sbjct: 189 FWMMLKEGYDFFETNRKPPKITVYDKRYVF 218
>gi|188584157|ref|YP_001927602.1| hypothetical protein Mpop_4971 [Methylobacterium populi BJ001]
gi|179347655|gb|ACB83067.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 400
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 135/212 (63%), Gaps = 1/212 (0%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
S +L DKA P+ + M + T P V+R +K E+ +E+WKRN YV +K Y
Sbjct: 27 SAALADKASAPIPAATLALMAARGTHAASPIVLRAYKKESEIEVWKRNAAGRYVPIKTYP 86
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL 141
IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS +IG+PN +D+AH TG+ +
Sbjct: 87 ICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDIGYPNAYDRAHGSTGSAV 146
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201
M+HG C+S GC+AM + E+++I R++ G QS Q Q+FPFRMT+ NM ++ +PN
Sbjct: 147 MVHGICSSMGCFAMTDAVAGELFSIAREAFAGG-QSAFQFQSFPFRMTAANMARHRTDPN 205
Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+FW LK G D FE +EP + + +Y F
Sbjct: 206 IAFWRQLKEGSDRFEATGEEPVVSVAGGRYAF 237
>gi|254500364|ref|ZP_05112515.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436435|gb|EEE43114.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 410
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 151/234 (64%), Gaps = 6/234 (2%)
Query: 2 TNRYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
T +LL + + GC S +K + P+S ++ M P +IRIFK
Sbjct: 26 TRVAAVLLAGVLV---GCQADDFASGPNKHKAPVSASIKRKMADLNMPSTSPIMIRIFKE 82
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+WK+ ++ LL+E++IC WSG GPK + GD QAPEGFY + +NPNS Y
Sbjct: 83 ESELEVWKQTRTGKFKLLEEFEICKWSGKLGPKFKEGDRQAPEGFYEVTPALMNPNSSYH 142
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ N+GFPN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G +S
Sbjct: 143 LAFNLGFPNRYDQAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGGARS-F 201
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+QAFPFRMT +N+ + ++ + +FW MLK G+D+FE + P I + K+YVF
Sbjct: 202 QVQAFPFRMTPENLAKHYDSQHLAFWKMLKTGYDHFEVTNTPPAISVCEKKYVF 255
>gi|163853853|ref|YP_001641896.1| hypothetical protein Mext_4457 [Methylobacterium extorquens PA1]
gi|163665458|gb|ABY32825.1| protein of unknown function DUF949 [Methylobacterium extorquens
PA1]
Length = 396
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 133/207 (64%), Gaps = 1/207 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Y IC WS
Sbjct: 28 DKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKRNASGRYVPIKTYPICRWS 87
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG+ +M+HG
Sbjct: 88 GQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTGSAVMVHGV 147
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ +PN +FW
Sbjct: 148 CSSMGCFAMTDAVAGELFAIAREAFAGG-QGAFQFQSFPFRMTAANMARHRTDPNIAFWR 206
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +EP + ++ +Y F
Sbjct: 207 QLKEGSDRFEATGEEPAVSVVGGRYTF 233
>gi|254563816|ref|YP_003070911.1| hypothetical protein METDI5493 [Methylobacterium extorquens DM4]
gi|254271094|emb|CAX27101.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens
DM4]
Length = 381
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 133/207 (64%), Gaps = 1/207 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Y IC WS
Sbjct: 14 DKANAPIPAATLALMTARGTNAASPIVLRAYKKESEIEVWKRNAAGRYVPIKTYPICRWS 73
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG+ +M+HG
Sbjct: 74 GQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTGSAVMVHGV 133
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ +PN +FW
Sbjct: 134 CSSMGCFAMTDAVAGELFAIAREAFAGG-QGAFQFQSFPFRMTAANMARHRTDPNIAFWR 192
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +EP + + + +Y F
Sbjct: 193 QLKEGSDRFEATGEEPAVSVTSGRYTF 219
>gi|328541957|ref|YP_004302066.1| transcriptional regulatory protein [polymorphum gilvum SL003B-26A1]
gi|326411707|gb|ADZ68770.1| Putative transcriptional regulatory protein [Polymorphum gilvum
SL003B-26A1]
Length = 452
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 11/222 (4%)
Query: 13 FIFLNGCHHSRSLIDKAEHPLSE-NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
F +G H R + + +H +++ + +S P +IRIFK E+ LE+WK+ +
Sbjct: 33 FSLGSGPKHLRPVSAEVKHKMTDLGMDVS---------SPIMIRIFKEESQLEVWKQAKN 83
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131
Y LL+ ++IC WSG GPKI+ GD QAPEGFY I +NPNS Y L+ N+G+PN FD
Sbjct: 84 GRYALLQTFEICKWSGELGPKIKEGDRQAPEGFYEITPALMNPNSSYHLAFNLGYPNAFD 143
Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
++H RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G +S Q+QAFPFRMT +
Sbjct: 144 RSHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGGQRS-FQVQAFPFRMTPE 202
Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
NM +++N + FW MLK G+D+FE P + + ++YV+
Sbjct: 203 NMARHRHNQHIDFWRMLKAGYDHFEVTKLPPKVDVCERKYVY 244
>gi|240141307|ref|YP_002965787.1| hypothetical protein MexAM1_META1p4901 [Methylobacterium extorquens
AM1]
gi|240011284|gb|ACS42510.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens
AM1]
Length = 382
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 132/207 (63%), Gaps = 1/207 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Y IC WS
Sbjct: 14 DKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKRNASGRYVPIKTYPICRWS 73
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG+ +M+HG
Sbjct: 74 GQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTGSAVMVHGV 133
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ +PN +FW
Sbjct: 134 CSSMGCFAMTDAVAGELFAIAREAFAGG-QGAFQFQSFPFRMTAANMARHRTDPNIAFWR 192
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +EP + + +Y F
Sbjct: 193 QLKEGSDRFEATGEEPAVSVAGGRYTF 219
>gi|218532798|ref|YP_002423614.1| hypothetical protein Mchl_4921 [Methylobacterium chloromethanicum
CM4]
gi|218525101|gb|ACK85686.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 406
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 133/207 (64%), Gaps = 1/207 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Y IC WS
Sbjct: 38 DKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKRNASGRYVPIKTYPICRWS 97
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG+ +M+HG
Sbjct: 98 GQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTGSAVMVHGV 157
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ +PN +FW
Sbjct: 158 CSSMGCFAMTDAVAGELFAIAREAFAGG-QVAFQFQSFPFRMTAANMARHRTDPNIAFWR 216
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D FE +EP + + + +Y F
Sbjct: 217 QLKEGSDRFEATGEEPAVSVTSGRYTF 243
>gi|218529105|ref|YP_002419921.1| hypothetical protein Mchl_1094 [Methylobacterium chloromethanicum
CM4]
gi|240141940|ref|YP_002966450.1| hypothetical protein MexAM1_META2p0201 [Methylobacterium extorquens
AM1]
gi|254559780|ref|YP_003066875.1| hypothetical protein METDI1259 [Methylobacterium extorquens DM4]
gi|218521408|gb|ACK81993.1| protein of unknown function DUF949 [Methylobacterium
chloromethanicum CM4]
gi|240011884|gb|ACS43109.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254267058|emb|CAX22871.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 357
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 132/202 (65%), Gaps = 1/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M K SP P ++R +K E+ +E+WKR D +Y LLK Y +C WSG GP
Sbjct: 32 PIPPATLALMSTKEMSPADPILMRAYKKESEIELWKRGADGKYALLKTYPMCRWSGQLGP 91
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K GD QAPEGFY I ++NPNS +LS N+G+PNE+D++ RTGA LM+HG C+S G
Sbjct: 92 KTREGDRQAPEGFYSITPASMNPNSSLYLSFNLGYPNEYDRSLGRTGAHLMVHGSCSSRG 151
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ +PN +FW +K G
Sbjct: 152 CFAMTDEAISELYAVVREAFAGG-QHAVQFQSYPFRMTPENLARHRQDPNIAFWMNIKEG 210
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
D FE EP + + +YVF
Sbjct: 211 SDRFEITKTEPVVGVAGARYVF 232
>gi|254564096|ref|YP_003071191.1| hypothetical protein METDI5786 [Methylobacterium extorquens DM4]
gi|254271374|emb|CAX27387.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 462
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 14 IFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S L +++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSQTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGA 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNGG-QRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVF 237
>gi|307942526|ref|ZP_07657874.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4]
gi|307774165|gb|EFO33378.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4]
Length = 408
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
K + P+ + M + P +IRIFK E+ LE+WK+ Y LL+ ++IC WSG
Sbjct: 48 KHKRPVDSTIKRKMTELGMRSTSPIMIRIFKQESELEVWKQARGGRYKLLETFEICKWSG 107
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK + GD QAPEGFY I + +NP S Y L+ N+G+PN FD+AH RTG+ LM+HG C
Sbjct: 108 ELGPKFKEGDRQAPEGFYEIMPSLMNPKSSYHLAFNLGYPNRFDRAHGRTGSHLMVHGAC 167
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+S GCYAM +KQ+Q+IYA+ RDS +G +S Q+QAFPFRMT +NM + + + FW M
Sbjct: 168 SSRGCYAMTDKQVQDIYALARDSFKGGQRS-FQVQAFPFRMTPENMAKNRESEHMDFWRM 226
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK+G+D+FE P I + K+YVF
Sbjct: 227 LKVGYDHFELTKVPPKISVCEKKYVF 252
>gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099]
gi|14023835|dbj|BAB50440.1| mlr3577 [Mesorhizobium loti MAFF303099]
Length = 395
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ RIFK E LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY + + +
Sbjct: 8 MARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQM 67
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NP S Y LS NIGFPN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA RD+ +
Sbjct: 68 NPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQ 127
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ Q++AFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YV
Sbjct: 128 GG-QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDVCEKRYV 186
Query: 233 F 233
F
Sbjct: 187 F 187
>gi|163854129|ref|YP_001642172.1| hypothetical protein Mext_4733 [Methylobacterium extorquens PA1]
gi|163665734|gb|ABY33101.1| protein of unknown function DUF949 [Methylobacterium extorquens
PA1]
Length = 462
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
G +RSL P+ + MQ K S P +IR FK E +E+WKR + +Y LL
Sbjct: 28 GGASTRSLT-----PIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANGQYALL 82
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+A T
Sbjct: 83 KTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDRAKGGT 142
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N+ ++
Sbjct: 143 GNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNGG-QRAFQFQSYPFRMTASNIAKFR 201
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
N+PN FW LK G DYFE +EP + +YVF
Sbjct: 202 NDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVF 237
>gi|218533074|ref|YP_002423890.1| hypothetical protein Mchl_5200 [Methylobacterium chloromethanicum
CM4]
gi|218525377|gb|ACK85962.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 462
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
G +RSL P+ + MQ K S P +IR FK E +E+WKR + +Y LL
Sbjct: 28 GGASTRSLT-----PIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANGQYALL 82
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+A T
Sbjct: 83 KTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDRAKGGT 142
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N+ ++
Sbjct: 143 GNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNGG-QRAFQFQSYPFRMTASNIAKFR 201
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
N+PN FW LK G DYFE +EP + +YVF
Sbjct: 202 NDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVF 237
>gi|240141585|ref|YP_002966065.1| hypothetical protein MexAM1_META1p5185 [Methylobacterium extorquens
AM1]
gi|240011562|gb|ACS42788.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 462
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
G +RSL P+ + MQ K S P +IR FK E +E+WKR + +Y LL
Sbjct: 28 GGASTRSLT-----PIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANGQYALL 82
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+A T
Sbjct: 83 KTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDRAKGGT 142
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N+ ++
Sbjct: 143 GNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNGG-QRAFQFQSYPFRMTASNIAKFR 201
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
N+PN FW LK G DYFE +EP + +YVF
Sbjct: 202 NDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVF 237
>gi|188583325|ref|YP_001926770.1| hypothetical protein Mpop_4119 [Methylobacterium populi BJ001]
gi|179346823|gb|ACB82235.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 355
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M K SP P ++R +K E+ +E+WKR D +Y LLK Y +C WSG GP
Sbjct: 32 PIPPATLALMSAKGVSPADPILMRAYKKESEIELWKRGTDGKYALLKTYAMCRWSGQLGP 91
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K GD QAPEGFY + ++NPNS +LS N+G+PNE+D++ RTGA LM+HG C+S G
Sbjct: 92 KTREGDRQAPEGFYAVTPASMNPNSSLYLSFNLGYPNEYDRSLGRTGAHLMVHGSCSSRG 151
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ +PN +FW LK G
Sbjct: 152 CFAMTDEVISELYAVVREAFAGG-QRAVQFQSYPFRMTPENLARHRQDPNIAFWRNLKEG 210
Query: 212 HDYFEKNHQEPFIQIINKQYVFFKG 236
D FE E + + + +YVF G
Sbjct: 211 SDRFEVTGAEQGVGVADGRYVFDAG 235
>gi|319409434|emb|CBI83083.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 249
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 4/234 (1%)
Query: 3 NRYNILLFALFI-FLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
+RY + F L + L C S+ K + PL + + M + P+ P ++R FK
Sbjct: 4 SRYFLSFFLLAVGILAACQERLPASIQAKVKQPLPKEIQHKMVEYNVDPYAPIMMRFFKE 63
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
EN E+WK++ +VL+ Y IC WSG GPK + GD Q PEGFY + + +NP S+ +
Sbjct: 64 ENTAEVWKQDRTGRFVLVASYDICKWSGQLGPKYKEGDYQTPEGFYTVNASQMNPYSRRY 123
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
LS NIGFPN +D+AH RTG+ LM+HG C S GCYAM + M +IYA RD+ +G Q
Sbjct: 124 LSFNIGFPNLYDQAHGRTGSYLMVHGGCTSVGCYAMTDNNMGQIYAFARDAFKGG-QKEF 182
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+ FPFRMT NM+ +++NP+Y FW MLK G+D FE I + K+YVF
Sbjct: 183 QLHTFPFRMTDANMERHRDNPHYPFWMMLKEGYDLFEAKRAPSKIDVYEKRYVF 236
>gi|188584456|ref|YP_001927901.1| hypothetical protein Mpop_5272 [Methylobacterium populi BJ001]
gi|179347954|gb|ACB83366.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 475
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
G +RSL P+ + MQ K S P +IR FK E +E+WKR + +Y LL
Sbjct: 28 GGASTRSLT-----PIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGSNGQYALL 82
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+A T
Sbjct: 83 KTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDRAKGGT 142
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N+ ++
Sbjct: 143 GNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNGG-QRAFQFQSYPFRMTASNIAKFR 201
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
N+PN FW LK G DYFE +EP + +YVF
Sbjct: 202 NDPNAPFWKNLKEGSDYFEALKEEPRVAACGTKYVF 237
>gi|159185833|ref|NP_356981.2| hypothetical protein Atu3631 [Agrobacterium tumefaciens str. C58]
gi|159140967|gb|AAK89766.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 379
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P +IRIFK E LEIWK D + + Y+ICAWSG GPK++ GD QAPEGFY +
Sbjct: 6 PIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFYNLTPA 65
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+LNPNSKY+L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY RD+
Sbjct: 66 HLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARDA 125
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
+G Q +Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P + + K+
Sbjct: 126 FKGG-QKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVNVCEKK 184
Query: 231 YVF 233
YVF
Sbjct: 185 YVF 187
>gi|182679828|ref|YP_001833974.1| hypothetical protein Bind_2917 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635711|gb|ACB96485.1| protein of unknown function DUF949 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 545
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
+A PLS + M + T+ P +IR +K E LEIWK D Y LK Y +C WSG
Sbjct: 64 RAHAPLSHKTLTLMSEHGTTSASPVLIRTYKKEAELEIWKMGADGRYKHLKTYPMCRWSG 123
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
GPK+ GD Q PEGFY I ++PNS Y+LS ++G+PN FD+A R+G +M+HG C
Sbjct: 124 QLGPKMREGDRQVPEGFYAITPAQMHPNSHYYLSFDVGYPNTFDRAWGRSGGSIMVHGVC 183
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
+SAGC++M ++Q++EIYAIVR+ G Q IQ+Q++PFRMT++N+ Y+ +PN +FW
Sbjct: 184 SSAGCFSMTDEQIEEIYAIVREGFAGG-QRAIQMQSYPFRMTAENLAKYRLDPNIAFWRQ 242
Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVF 233
LK G D+F+ QE + + ++ Y+F
Sbjct: 243 LKEGADHFDLTRQEVIVGVCDRHYIF 268
>gi|240139176|ref|YP_002963651.1| hypothetical protein MexAM1_META1p2599 [Methylobacterium extorquens
AM1]
gi|240009148|gb|ACS40374.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 356
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 130/205 (63%), Gaps = 1/205 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M K S P ++R +K E+ +E+WKR D Y LLK Y +C WSG GP
Sbjct: 32 PIPPATLALMSTKGVSAADPILMRAYKKESEIELWKRGADGRYALLKTYPMCRWSGQLGP 91
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K GD QAPEGFY + +LNPNS +LS ++G+PNE+D++ RTGA LM+HG C+S G
Sbjct: 92 KTREGDRQAPEGFYAVTPASLNPNSSLYLSFDLGYPNEYDRSLGRTGAHLMVHGSCSSRG 151
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ +PN +FW LK G
Sbjct: 152 CFAMTDEAISELYAVVREAFAGG-QRAVQFQSYPFRMTPENLARHRQDPNVAFWRNLKEG 210
Query: 212 HDYFEKNHQEPFIQIINKQYVFFKG 236
D FE EP + +YVF G
Sbjct: 211 SDRFEVTWAEPVVGAAGGRYVFDAG 235
>gi|300024682|ref|YP_003757293.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526503|gb|ADJ24972.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 321
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
+ A + L C ++ ++ +E PLS++ I + KK P +RIFK E+ LEIWK+
Sbjct: 17 VMAGAVLLAACSNTPTIPPPSEVPLSKDAISLLAKKGMQSGSPIFVRIFKEESELEIWKQ 76
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
D + K Y IC WSG GPK+ GD QAPEGFY + +NPNSKY+LS N+G+PN
Sbjct: 77 RDDGRFYHFKTYPICNWSGEIGPKLTYGDRQAPEGFYSVTPGLMNPNSKYYLSFNLGYPN 136
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D++ NRTG +M+HG C SAGCYAM + M+EIY + R++L+ Q+ Q+QA PFRM
Sbjct: 137 AYDRSWNRTGDSVMVHGNCRSAGCYAMTDALMEEIYGLSREALKAG-QTSFQVQALPFRM 195
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
T M +N+ ++W LK G+DYFEK P + + ++YV
Sbjct: 196 TDARMAREKNSKWLTYWKTLKQGYDYFEKYRVPPNVVVCERRYV 239
>gi|170743408|ref|YP_001772063.1| hypothetical protein M446_5308 [Methylobacterium sp. 4-46]
gi|168197682|gb|ACA19629.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46]
Length = 415
Score = 214 bits (544), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M + T+P P ++R FK E +E+W R D + LK + IC WSG GP
Sbjct: 45 PIPGPTLALMAARGTAPGAPILMRAFKKEAEIEVWTRGADGRFAHLKTFPICRWSGQLGP 104
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K +GD QAPEGFY I +NPNS+Y+LS ++G+PN +D+AH TG+ LM+HG C+SAG
Sbjct: 105 KRRSGDRQAPEGFYSIRPAQMNPNSRYYLSFDVGYPNAYDRAHGGTGSALMVHGTCSSAG 164
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM + Q+ EI+A+ R++ G Q+ Q QA+PFRM++ + ++ +PN FW LK G
Sbjct: 165 CFAMTDAQVSEIFALAREAFAGG-QAAFQFQAYPFRMSAAALARHRLDPNIDFWRQLKEG 223
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
D FE +EP + + +Y F
Sbjct: 224 ADRFEATGREPLVTVAGGRYAF 245
>gi|298291546|ref|YP_003693485.1| hypothetical protein Snov_1557 [Starkeya novella DSM 506]
gi|296928057|gb|ADH88866.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 339
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
D+A+ P+ L+ M K SP P ++RI+K E+ LEIWKR+ Y LLK Y +C WS
Sbjct: 26 DRADVPIPPKLMQQMAAKGMSPADPIMVRIYKRESELEIWKRDRSGRYALLKTYPMCRWS 85
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK GD QAPEGFY + +NP S+++L+ N+G+PN+ ++A +G+ LM+HG
Sbjct: 86 GRLGPKTREGDRQAPEGFYAVTPGLMNPRSQFYLAFNLGYPNQLEEALGYSGSALMVHGA 145
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C SAGCYAM N + E+YA+ R++L Q Q+QA PFRMT N ++++PN +FW
Sbjct: 146 CTSAGCYAMTNDGIAEVYAVAREALAAG-QPSFQVQALPFRMTPANFAEHRDDPNMAFWR 204
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
LK G D F Q P + +Y F G
Sbjct: 205 NLKEGTDLFAVTRQPPNVAACGGRYRFTPG 234
>gi|258544108|ref|ZP_05704342.1| lipoprotein [Cardiobacterium hominis ATCC 15826]
gi|258520616|gb|EEV89475.1| lipoprotein [Cardiobacterium hominis ATCC 15826]
Length = 453
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 125/184 (67%), Gaps = 3/184 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P IRIFK E +LE+W + EY L +Y IC +SG GPK GD+Q+PEGFY +G
Sbjct: 54 PAFIRIFKKEEVLEVWLQKDSGEYALFLDYPICIYSGELGPKTREGDKQSPEGFYAVGRE 113
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+NPNS+Y LS N+G+PN +D+AH +G+ LM+HG+C S GCYAM ++Q++EIY +V +
Sbjct: 114 AMNPNSQYHLSFNLGYPNAYDRAHGYSGSMLMVHGKCVSIGCYAMGDRQIEEIYTLVGSA 173
Query: 171 L-RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
L RG Q ++++ AFPFRMT N+ Y + Y FW MLK G+DYFE+ HQ P I +I
Sbjct: 174 LQRG--QPYVRVHAFPFRMTDANLAAYSEHRWYDFWRMLKPGYDYFERYHQPPEIDVIGG 231
Query: 230 QYVF 233
QY
Sbjct: 232 QYAL 235
>gi|323137197|ref|ZP_08072276.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
gi|322397555|gb|EFY00078.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
Length = 407
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M+K T+ P +IR +K E LEIWK D YV LK + +C WSG GP
Sbjct: 35 PIPPETVALMEKVGTTKEAPMLIRAYKKEAELEIWKMRSDGRYVHLKTFPMCRWSGQLGP 94
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K GD Q PEGFY I +NPNS Y+LS N+G+PN+ D+A +G +M+HG C+SAG
Sbjct: 95 KTREGDRQVPEGFYSITPAQMNPNSAYYLSFNVGYPNQLDRALGHSGGTIMVHGACSSAG 154
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C++M +KQ+ EIYAI R S G Q IQ+Q++PF+MT++N+ ++ +PN FW LK G
Sbjct: 155 CFSMTDKQIAEIYAIARSSF-GGGQRAIQMQSYPFKMTAENLAKHRLDPNIGFWKNLKEG 213
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
+D+FE +EP + + YVF
Sbjct: 214 NDHFEVTKEEPQVAFCGRHYVF 235
>gi|152992424|ref|YP_001358145.1| hypothetical protein SUN_0830 [Sulfurovum sp. NBC37-1]
gi|151424285|dbj|BAF71788.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 294
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
IRIFK E +LE+W + D EY LLKEYKICA+SG GPK++ GD QAPEGFY + LN
Sbjct: 112 IRIFKREALLEVWIKK-DGEYKLLKEYKICAYSGRLGPKLKEGDRQAPEGFYSVNRGRLN 170
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P+SK+ LS N+G+PN +D+A+ RTGA LM+HG C S GCYAM + +++EIY +V ++L+
Sbjct: 171 PHSKFHLSFNLGYPNAYDRAYGRTGAYLMVHGNCVSIGCYAMTDAKIEEIYMLVEEALKK 230
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
Q +Q+ +PFRMT +NM Y + YSFW LK G+DYFE H P I + NK+Y+
Sbjct: 231 G-QKRVQVHIYPFRMTPENMAAYSHYRWYSFWQNLKEGYDYFEAEHLPPKISVENKRYI 288
>gi|296445739|ref|ZP_06887692.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
gi|296256719|gb|EFH03793.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
Length = 500
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
C+ S L ++ P+ + M++ + PT+IR +K E+ +IWK+ D YV LK
Sbjct: 26 CNDS-GLSQRSLQPIPPETLALMEQAGVTKESPTLIRSYKKESEFQIWKQRPDGRYVYLK 84
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
+ +C WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+G+PN +D+A G
Sbjct: 85 TFPMCRWSGQLGPKVREGDRQAPEGFYSITPGQMNPNSSYYLSFNVGYPNAYDRALGHGG 144
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
+M+HG C+SAGC++M + Q+ EIYAI+R S N Q IQ+Q++PF+MT++N+ ++
Sbjct: 145 GSIMVHGACSSAGCFSMTDHQISEIYAILRTSF-NNGQRAIQMQSYPFKMTAENLAKHRL 203
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+P+ FW LK G D+FE +EP + + YVF T
Sbjct: 204 DPHIGFWKQLKNGSDHFETAWREPTVGVCGHHYVFDAAPT 243
>gi|254500008|ref|ZP_05112161.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222441475|gb|EEE48152.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 345
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 5/232 (2%)
Query: 6 NILLFALFIF---LNGC-HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+L ++ IF L GC S + + E + + M+ K P IRIFK E+
Sbjct: 14 RVLSVSMTIFTLLLAGCVGSSLEMESRGEIAIPYKVTALMRNKGVKGSDPVFIRIFKQES 73
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+WK+ +YVLLK Y++C WSG GPK GD QAPEG Y + LNPNSKYFLS
Sbjct: 74 ELEVWKKRRAGDYVLLKTYEMCRWSGDLGPKRAEGDRQAPEGIYEVTLGRLNPNSKYFLS 133
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
++G+PN+ ++A +G LM+HG C+S+GC+A+ ++Q+ E+YA+VRD+LR Q +Q+
Sbjct: 134 FDLGYPNKLERAKGYSGTALMVHGACSSSGCFAITDEQITEVYALVRDALRAG-QPSVQV 192
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+ PFRMT +N+ + +NPN SFW LK FE + P + +Y F
Sbjct: 193 QSLPFRMTPENLARHYDNPNLSFWLDLKEASTTFEVLRRPPEFRFCEGRYRF 244
>gi|312114367|ref|YP_004011963.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219496|gb|ADP70864.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 453
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 13/229 (5%)
Query: 12 LFIFLNGC-------HHSRSLIDKAEH--PLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
L + L GC + + + AE P S +++++ RT P IRIFK E+
Sbjct: 13 LLLGLTGCLNLFGFGGDAENAVPPAERQLPASTQAMLAIKGMRTD--APIFIRIFKEESE 70
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
LE+WK D + + Y ICAWSGT GPKI+TGD Q+PEGFY + +NP S Y+L+
Sbjct: 71 LEVWKLK-DGRFQHFRTYPICAWSGTLGPKIQTGDRQSPEGFYTVTRGQMNPRSNYYLAF 129
Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
NIG+PN D+ + TG+ LM+HG C S GCYAM + ++EIY + R++ Q+ +Q
Sbjct: 130 NIGYPNVHDQVNGHTGSALMVHGNCKSVGCYAMTDAYIEEIYILAREAFDAG-QTKFHVQ 188
Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
A PFRMT+ NM +++NP Y+FW LK G+D FE + + P +++ KQY
Sbjct: 189 ALPFRMTAANMAKHRDNPWYAFWARLKEGYDSFEASGKPPIVKVCGKQY 237
>gi|170747478|ref|YP_001753738.1| hypothetical protein Mrad2831_1046 [Methylobacterium radiotolerans
JCM 2831]
gi|170654000|gb|ACB23055.1| protein of unknown function DUF949 [Methylobacterium radiotolerans
JCM 2831]
Length = 397
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 130/202 (64%), Gaps = 2/202 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M +K + P + R +K E+ +E+WK+ A YV +K + IC WSG GP
Sbjct: 32 PIPAATLALMAQKGVTAASPVLFRAYKKESEIEVWKKGA-AGYVYIKTFPICRWSGQLGP 90
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K +GD Q PEGFY + +NPNS Y+LS ++G+PN +D+AH TG+ +M+HG C+S G
Sbjct: 91 KRRSGDRQTPEGFYSVPRRQMNPNSHYYLSFDVGYPNAYDRAHGGTGSAVMVHGICSSMG 150
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM N + EIYAI RD+L G Q+ Q Q++PFRMT++NM ++ +PN +FW LK G
Sbjct: 151 CFAMTNGTVGEIYAIARDALNGG-QAAFQFQSYPFRMTAENMARHRTDPNIAFWRDLKAG 209
Query: 212 HDYFEKNHQEPFIQIINKQYVF 233
D FE + +E + ++ +Y F
Sbjct: 210 SDRFEVSREELQVSVVAGRYAF 231
>gi|90419248|ref|ZP_01227158.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336185|gb|EAS49926.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 362
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
+RT P ++RIFK E+ LE+W++ D Y L K + +C WSG GPK GD QAPEG
Sbjct: 73 ERTRPEGSILMRIFKEESELEVWRQGADGRYALHKTHPMCRWSGRLGPKTADGDRQAPEG 132
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEI 163
FY + + +NPNSKY S N+G+PN+ ++A TG LM+HG C+SAGC+AM + + E+
Sbjct: 133 FYQVTASLMNPNSKYHRSFNLGYPNQLERALGYTGDSLMVHGACSSAGCFAMTDNGVAEV 192
Query: 164 YAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPF 223
YA + + R QS Q+Q+FPFRMT++ M +Q +PN FW LKLG+D FE +EP
Sbjct: 193 YAEAQSAFRIG-QSDFQVQSFPFRMTAEQMAKHQGDPNIEFWRNLKLGYDVFEVTRREPT 251
Query: 224 IQIINKQYVF 233
+ +YVF
Sbjct: 252 VAACGGRYVF 261
>gi|300024883|ref|YP_003757494.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526704|gb|ADJ25173.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 326
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 135/232 (58%), Gaps = 3/232 (1%)
Query: 4 RYNILLFALFIF--LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R N L LF+ L H +R+ A PL ++ K P P IR+FK E+
Sbjct: 3 RANWLAAVLFLLGTLPALHAARAEEQAAAKPLPATTEAALLMKEIVPEAPVYIRVFKEES 62
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+WK + Y L+K + IC W GT GPK GD +PEGFY + P+SKY L+
Sbjct: 63 ELEVWKARPNGRYALVKTFPICNWGGTLGPKQTQGDRMSPEGFYAATPGGMKPDSKYHLA 122
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN D+A RTGA +M+HG+C S GC+AM++K ++EIYA VRD+L + + +
Sbjct: 123 FNIGYPNALDRALGRTGAYIMVHGDCRSVGCFAMSDKLIEEIYAFVRDALAAG-EPSVPV 181
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FPFRMT+ N++ + +NP + W LK +D F + + P + + +K+YV
Sbjct: 182 HVFPFRMTASNIKRHADNPARTTWAPLKQAYDDFAETREPPKVGMCSKRYVV 233
>gi|269119360|ref|YP_003307537.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC
33386]
gi|268613238|gb|ACZ07606.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC
33386]
Length = 247
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P IR+FK E LE+W +N Y L K + IC +SG GPK + GD+++PEGFYY
Sbjct: 63 NPLYIRVFKEEKELEMWIKNDSGTYSLYKVFDICTFSGGLGPKKKEGDKKSPEGFYYTQK 122
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+ LNPNS Y LS NIG+PNE+DK+H TG+ +MIHG+C S GCYAM +K ++EIY +V
Sbjct: 123 SFLNPNSAYHLSFNIGYPNEYDKSHGYTGSLIMIHGDCLSIGCYAMTDKYIEEIYGLVEK 182
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+L N Q I + FPF+MT+ NM+ ++ + YSFW LK G+DYFEKN P + + NK
Sbjct: 183 TLN-NGQEKINVDVFPFKMTAANMKRHKKSEYYSFWEELKPGYDYFEKNKIPPRMTVENK 241
Query: 230 QY 231
+Y
Sbjct: 242 KY 243
>gi|90020858|ref|YP_526685.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Saccharophagus degradans
2-40]
gi|89950458|gb|ABD80473.1| protein of unknown function DUF949 [Saccharophagus degradans 2-40]
Length = 238
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 138/228 (60%), Gaps = 1/228 (0%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
++LLF+ I N + + A + + LI ++ +K P IRIFK LE+
Sbjct: 9 SLLLFSCAIAANNQLPTSARSIAAINKVEPALIKALSEKGLRYGAPIFIRIFKQSATLEV 68
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
W + + L K Y ICA SG GPK+ +GD QAPEGFY++ NP SK+ LS N+G
Sbjct: 69 WLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVNAQRFNPWSKFHLSFNLG 128
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN +D+AH RTG+ LM+HG+C S GCYAM + ++EIYA+ + SL + Q ++ FP
Sbjct: 129 YPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQKSLE-DGQPFFRVHIFP 187
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FR++ + ++ +NN Y+FW LK G DYFE+ P + + NK+YVF
Sbjct: 188 FRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNKRYVF 235
>gi|251788530|ref|YP_003003251.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
gi|247537151|gb|ACT05772.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
Length = 241
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 130/201 (64%), Gaps = 5/201 (2%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
PLS ++ + K+ P I+IFK E +LE++ + EY L++ Y IC +SG GP
Sbjct: 26 PLSP---VATETKQQVTGSPVYIQIFKEERVLELYAM-IGGEYKLVQSYPICKYSGGLGP 81
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K+ GD ++PEGFY + L P+S Y+ +IN+GFPNE+D+AH +G LMIHGEC S G
Sbjct: 82 KMTEGDFKSPEGFYQVDLRQLKPDSHYYRAINVGFPNEYDRAHGYSGRYLMIHGECVSIG 141
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
CYAM NK ++EIY V +LR N Q +++ +PFRMT +NM+ + + Y FW+ L+ G
Sbjct: 142 CYAMTNKYIEEIYTYVEKALR-NGQQKVELAIYPFRMTEQNMKRHSRSNYYKFWSQLQPG 200
Query: 212 HDYFEKNHQEPFIQIINKQYV 232
+ YF + HQ P + ++N QYV
Sbjct: 201 YAYFNRTHQPPAVSVLNGQYV 221
>gi|307132284|ref|YP_003884300.1| hypothetical protein Dda3937_04297 [Dickeya dadantii 3937]
gi|306529813|gb|ADM99743.1| conserved protein [Dickeya dadantii 3937]
Length = 241
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 9/225 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L A+ L S S ++ P +E + Q+ SP + I+IFK E ILE++
Sbjct: 6 LSLAMLFVLPSVAISNSYANQVSPPATE----TTQQVAGSPVY---IQIFKEERILELYA 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFP
Sbjct: 59 RTGN-EYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+AH +G LMIHGEC S GCYAM N+ + EIY V +LR N Q +++ +PFR
Sbjct: 118 NEYDRAHGYSGRYLMIHGECVSIGCYAMTNQYIAEIYTYVEKALR-NGQQKVELAIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
M +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV
Sbjct: 177 MNEQNMKRHSRSTYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYV 221
>gi|271501763|ref|YP_003334789.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
gi|270345318|gb|ACZ78083.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
Length = 241
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 2/194 (1%)
Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
++ + K+ P I+IFK E +LE++ + EY L++ Y IC +SG GPK+ GD
Sbjct: 30 VATETKQQVAGSPVYIQIFKEERVLELYAM-IGGEYKLVQSYPICKYSGGLGPKMTEGDF 88
Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNK 158
++PEGFY + L P+S Y+ +IN+GFPNE+D+AH +G LMIHGEC S GCYAM NK
Sbjct: 89 KSPEGFYQVDLKQLKPDSHYYRAINVGFPNEYDRAHGYSGRYLMIHGECVSIGCYAMTNK 148
Query: 159 QMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKN 218
++EIY V +LR N Q +++ +PFRMT +NM+ + + Y FW+ L+ G+ YF +
Sbjct: 149 YIEEIYTYVEKALR-NGQQKVELAIYPFRMTEQNMKRHSRSNYYKFWSQLQPGYAYFNRM 207
Query: 219 HQEPFIQIINKQYV 232
HQ P + ++N QYV
Sbjct: 208 HQPPAVSVLNGQYV 221
>gi|325498730|gb|EGC96589.1| hypothetical protein ECD227_2827 [Escherichia fergusonii ECD227]
Length = 244
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 9/231 (3%)
Query: 7 ILLFALFIFLNGCH------HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
ILLFA+ I L G H + +S+ E P+S + ++ K P IRIFK E
Sbjct: 9 ILLFAVVIAL-GVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHPGDQLFIRIFKAE 66
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L
Sbjct: 67 DKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHL 126
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ +S +
Sbjct: 127 AFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSGQKS-VP 185
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 186 VHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 236
>gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784589|emb|CAE13489.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 247
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 4/201 (1%)
Query: 34 SENLIISMQKK-RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
+++ ++ +Q+ P P I+IFK E ILE++ +N Y L K Y IC +SG GPK
Sbjct: 26 TQDTLVQLQQNFPVQPGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPK 85
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGC 152
GD ++PEGFY + + LNPNS+Y+ SIN+GFPNE+DK +G LMIHGEC S GC
Sbjct: 86 TTEGDLKSPEGFYRVKTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGC 145
Query: 153 YAMNNKQMQEIYAIVRDS-LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
YAM N M EIY V + LRG Q I I +PFRMT +NM ++++ +Y FW L+
Sbjct: 146 YAMTNGYMDEIYHYVESALLRG--QYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPA 203
Query: 212 HDYFEKNHQEPFIQIINKQYV 232
++YF KNHQ + IIN QYV
Sbjct: 204 YEYFAKNHQPATVSIINGQYV 224
>gi|300024683|ref|YP_003757294.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526504|gb|ADJ24973.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 295
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P ++RIFK E LE+W + D + Y IC WSG GPK+ GD QAPEGFY + +
Sbjct: 95 PVLVRIFKREFELELWMQR-DGAFRRFATYPICRWSGWLGPKLVEGDRQAPEGFYTVEAS 153
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
LNPNS++F S N+G+PN FD+A RTG+ +M+HG C S GC+AM N QM EI+ +V +
Sbjct: 154 ALNPNSRWFRSFNLGYPNAFDRAQGRTGSLIMVHGGCGSIGCFAMTNGQMAEIWRLVTAA 213
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L G Q Q+Q +PFRM+ ++ + +P+ +FW LK GHD FE N P + + +
Sbjct: 214 L-GGGQKRFQVQVYPFRMSEAELKAHAKDPDIAFWRDLKAGHDLFEANAVPPTVSVCKGR 272
Query: 231 YVFFKG 236
Y F G
Sbjct: 273 YQFQAG 278
>gi|218550430|ref|YP_002384221.1| hypothetical protein EFER_3124 [Escherichia fergusonii ATCC 35469]
gi|218357971|emb|CAQ90617.1| conserved Hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 246
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 139/231 (60%), Gaps = 9/231 (3%)
Query: 7 ILLFALFIFLNGCH------HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
ILLFA+ I L G H + +S+ E P+S + ++ K P IRI K E
Sbjct: 11 ILLFAVVIAL-GVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHPGDQLFIRILKAE 68
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L
Sbjct: 69 DKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHL 128
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ +S +
Sbjct: 129 AFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSGQKS-VP 187
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 188 VHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 238
>gi|146328753|ref|YP_001209058.1| lipoprotein [Dichelobacter nodosus VCS1703A]
gi|146232223|gb|ABQ13201.1| hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
Length = 248
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 141/240 (58%), Gaps = 13/240 (5%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSE---------NLIIS--MQKKRTSPFHP 51
NR ++ F+L ++ C + + E P S NL ++ ++ + P
Sbjct: 2 NRLFLIFFSLLALIS-CRAPEQNVVREEAPFSRLPAGVQNWWNLPLARHLEVRGFQLGAP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+RIFK E +LE+W + D Y L +++ ICA+SG GPK+ GD+QAPEG YY+G +
Sbjct: 61 VFVRIFKEERVLELWLKKDDDRYHLYQKFPICAFSGQLGPKVRRGDKQAPEGIYYVGLSQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
LNPNS++ L+ N+GFPN +D+AH TG LM+HG C S GCYAM ++Q++EIY I+ +L
Sbjct: 121 LNPNSRFHLAFNLGFPNLYDRAHGYTGDYLMVHGNCVSNGCYAMGDEQIEEIYQIIEAAL 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
+ Q + + FPF +T N+ YQ + Y FW MLK +DYFE P +Q+ +Y
Sbjct: 181 -WHGQPSVPVHIFPFPLTPANLAKYQYHRWYDFWQMLKPAYDYFEHYATPPVVQVNAGRY 239
>gi|212709370|ref|ZP_03317498.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM
30120]
gi|212688282|gb|EEB47810.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM
30120]
Length = 245
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Query: 35 ENLIISMQ-KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
E+ + S+ K T P I+IFK E +LE++++ +Y L+K Y IC +SG GPK
Sbjct: 24 EDALFSLNNKPATQPDSSIFIQIFKQEGVLELYQKTAVGKYKLVKTYPICKFSGGLGPKK 83
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY I + LNPNS+Y+ SIN+GFPNEFDK +G LMIHG C S GCY
Sbjct: 84 MEGDLKSPEGFYQITHSQLNPNSRYYRSINLGFPNEFDKTQGYSGNYLMIHGSCVSVGCY 143
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM +K M EIY IV +L+ N Q I + +PFRMT NM Y+N+ +Y+FW L+ +D
Sbjct: 144 AMTDKSMGEIYQIVEQALQ-NGQPAIDVSIYPFRMTKMNMLRYRNSAHYAFWKQLQPAYD 202
Query: 214 YFEKNHQEPFIQIINKQY 231
YFE+ I + +Y
Sbjct: 203 YFERTGNPAEISVTLGKY 220
>gi|315499814|ref|YP_004088617.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48]
gi|315417826|gb|ADU14466.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48]
Length = 240
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P +IRIFK + LE+W ++ +Y L K ++IC+WSG+ GPK + GD Q+PEGFY +
Sbjct: 57 QPILIRIFKETDELELWVKS-GGKYRLYKTFRICSWSGSLGPKKKEGDGQSPEGFYTVSR 115
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+ P+S+Y L+ N+G+PN FD+A+ R G+ LM+HG+CAS GCYAM +K ++EI+ I +
Sbjct: 116 GQMKPDSQYHLAFNLGYPNAFDRANGRIGSYLMVHGKCASIGCYAMTDKGIEEIWLIADE 175
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+L+G Q+ Q+ +PFRMT +++ + +P FW LK G+D FE+NH + + ++NK
Sbjct: 176 ALKGG-QTAFQVHVYPFRMTDAHIKRHVGSPWLGFWTDLKAGYDRFEQNHSDLNVTVVNK 234
Query: 230 QY 231
+Y
Sbjct: 235 RY 236
>gi|312892268|ref|ZP_07751764.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
gi|311295243|gb|EFQ72416.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
Length = 234
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 118/183 (64%), Gaps = 2/183 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P IRIFK E+ILEIW + D+ Y L K Y +C +SG FG K D ++PEGFYYI
Sbjct: 53 PIYIRIFKEEHILEIWVKK-DSTYSLFKTYPVCYFSGGFGTKTRINDGKSPEGFYYITPW 111
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
LNP S Y L+INIG+PN+ +K+ TG D+MIHG CAS GCYAM + ++EIY +V S
Sbjct: 112 QLNPVSHYHLAINIGYPNQLEKSKGYTGTDIMIHGHCASIGCYAMTDPLIEEIYTVVYKS 171
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q+ I + FPF++ + NM+L + +SFWN +K G+D FE P + ++NKQ
Sbjct: 172 LAAG-QTAIPLHIFPFKLNATNMKLCAASDYFSFWNNMKAGYDLFESRRIPPVVSVVNKQ 230
Query: 231 YVF 233
Y F
Sbjct: 231 YAF 233
>gi|253689656|ref|YP_003018846.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756234|gb|ACT14310.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 244
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A PL+ I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASETAP-PLAP---IAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQPKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYV 224
>gi|331664773|ref|ZP_08365678.1| putative inner membrane protein [Escherichia coli TA143]
gi|331058021|gb|EGI30003.1| putative inner membrane protein [Escherichia coli TA143]
Length = 239
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 134/230 (58%), Gaps = 12/230 (5%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
I+L +LFI F H + E P++ +L K P IRI K E+
Sbjct: 9 IVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLFIRILKAED 62
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 63 KLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLA 122
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L +S + +
Sbjct: 123 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPV 181
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 182 HIFPFAMNEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|284923183|emb|CBG36277.1| putative exported protein [Escherichia coli 042]
Length = 239
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 134/230 (58%), Gaps = 12/230 (5%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
I+L +LFI F H + E P++ +L I P IRI K E+
Sbjct: 9 IVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSLKI------IHPGDQLFIRILKAED 62
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 63 KLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKELLNPNSRYHLA 122
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L +S + +
Sbjct: 123 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPV 181
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 182 HIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|324115247|gb|EGC09211.1| ykud domain-containing protein [Escherichia fergusonii B253]
Length = 246
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 138/231 (59%), Gaps = 9/231 (3%)
Query: 7 ILLFALFIFLNGCH------HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
ILLFA+ I L G H + +S+ E P+S + ++ K IRI K E
Sbjct: 11 ILLFAVVIAL-GVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHHGDQLFIRILKAE 68
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L
Sbjct: 69 DKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHL 128
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ +S +
Sbjct: 129 AFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSGQKS-VP 187
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 188 VHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 238
>gi|123443424|ref|YP_001007397.1| hypothetical protein YE3221 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090385|emb|CAL13253.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 249
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
++FA+ I C + S A P++ + + Q +S + I+IFK E LE++
Sbjct: 3 IMFAMII----CLPAVSFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERTLELYA 54
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 55 R-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINIGFP 113
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFR
Sbjct: 114 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFR 172
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT +NMQ ++N+ +YSFW L+ G+ YF KN P + +IN QYV + T
Sbjct: 173 MTEQNMQRHRNSSDYSFWRQLQPGYAYFAKNRMPPSVSVINGQYVLSRPPT 223
>gi|157369197|ref|YP_001477186.1| hypothetical protein Spro_0952 [Serratia proteamaculans 568]
gi|157320961|gb|ABV40058.1| protein of unknown function DUF949 [Serratia proteamaculans 568]
Length = 256
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 137/235 (58%), Gaps = 19/235 (8%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ + ++ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PEVPVVKQQLVG---------SPVYIQIFKEERTLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNSFQICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + QS I I +
Sbjct: 113 GFPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAF-AYGQSRIDISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
PFRMT KN++ + ++ +FW LK G+DYF KNHQ P + + N QYV GQ +
Sbjct: 172 PFRMTDKNLKRHSSSSYIAFWRQLKPGYDYFVKNHQPPMVSVANGQYVL--GQPV 224
>gi|242238374|ref|YP_002986555.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
gi|242130431|gb|ACS84733.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
Length = 249
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 120/182 (65%), Gaps = 2/182 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E +LE++ ++ + +Y L++ Y IC +SG GPK GD ++PEGFY +
Sbjct: 49 PVYIQIFKEERVLELYSKSGN-DYRLVQSYPICKFSGGLGPKKTEGDFKSPEGFYQVDLR 107
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+Y+ +IN+GFPNE+D+A +G LMIHGEC S GCYAM NK + EIY V +
Sbjct: 108 QLKPDSRYYRAINVGFPNEYDRAQGYSGRYLMIHGECVSIGCYAMTNKSIDEIYTYVEKA 167
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
LR N Q + I +PFRMT +NM+ + + +Y FW+ L+ G+ +F HQ P + + N Q
Sbjct: 168 LR-NGQQKVDIAIYPFRMTEQNMKRHSRSVDYKFWSQLQPGYAFFNLTHQPPAVSVANGQ 226
Query: 231 YV 232
YV
Sbjct: 227 YV 228
>gi|168231886|ref|ZP_02656944.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194469493|ref|ZP_03075477.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248083|ref|YP_002148204.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|194455857|gb|EDX44696.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197211786|gb|ACH49183.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|205333905|gb|EDZ20669.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 239
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP IRI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEHIYLPVEKPVVSSLKIIHPGDQLFIRILKAEDKLELWASANNKPYELYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L +S + + FPF M KNM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPVHIFPFTMNDKNMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|218706781|ref|YP_002414300.1| hypothetical protein ECUMN_3641 [Escherichia coli UMN026]
gi|293406771|ref|ZP_06650697.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298382511|ref|ZP_06992108.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300897922|ref|ZP_07116301.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|218433878|emb|CAR14795.1| conserved Hypothetical protein [Escherichia coli UMN026]
gi|291426777|gb|EFE99809.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298277651|gb|EFI19167.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300358352|gb|EFJ74222.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 239
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 133/230 (57%), Gaps = 12/230 (5%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
I+L +LFI F H + E P++ +L I P IRI K E+
Sbjct: 9 IVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSLKI------IHPGDQLFIRILKAED 62
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 63 KLELWASTNNKPYELYKTRTICAWSGGLGPKHKQGDGKSPEGFYATNKELLNPNSRYHLA 122
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L +S + +
Sbjct: 123 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPV 181
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 182 HIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|227329184|ref|ZP_03833208.1| hypothetical protein PcarcW_18350 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 231
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 2/182 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E I E++ + V EY LL++Y IC +SG GPK GD ++PEGFY +
Sbjct: 32 PIYIQIFKEERIFELYAK-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLR 90
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+Y+ +INIGFPN++DK+ +G LMIHGEC S GCYAM N M EIY +
Sbjct: 91 QLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAA 150
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
LR N Q+ I I +PFRMT +NMQ ++N+ SFW L+ G+ YF +++Q P + + N Q
Sbjct: 151 LR-NGQAKIDIAIYPFRMTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAVTVFNGQ 209
Query: 231 YV 232
YV
Sbjct: 210 YV 211
>gi|205354181|ref|YP_002227982.1| hypothetical protein SG3168 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273962|emb|CAR38967.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629302|gb|EGE35645.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 239
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP IRI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEDVYLPVEKTVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L Q + + FPF M +NM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKRVPVHIFPFTMNDENMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|198245601|ref|YP_002217251.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|207858527|ref|YP_002245178.1| hypothetical protein SEN3112 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197940117|gb|ACH77450.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|206710330|emb|CAR34688.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326625028|gb|EGE31373.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 239
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP IRI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L Q + + FPF M +NM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKRVPVHIFPFTMNDENMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|16766575|ref|NP_462190.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62181788|ref|YP_218205.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167990158|ref|ZP_02571258.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197263468|ref|ZP_03163542.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62129421|gb|AAX67124.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|197241723|gb|EDY24343.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205331143|gb|EDZ17907.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248443|emb|CBG26280.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995473|gb|ACY90358.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159827|emb|CBW19346.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914303|dbj|BAJ38277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225961|gb|EFX51015.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716275|gb|EFZ07846.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323131637|gb|ADX19067.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990135|gb|AEF09118.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 239
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP IRI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L +S + + FPF M +NM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPVHIFPFTMNDENMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|270263442|ref|ZP_06191711.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13]
gi|270042326|gb|EFA15421.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13]
Length = 255
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 139/235 (59%), Gaps = 19/235 (8%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ + ++ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PEAPVVKQQLVG---------SPVYIQIFKEERTLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNSFRICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + Q+ I I +
Sbjct: 113 GFPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAF-AYGQNRIDISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
PFRMT +N++ ++++ + +FWN LK G+DYF KNH P + + N QYV GQ +
Sbjct: 172 PFRMTEQNLKRHRSSSDIAFWNQLKPGYDYFVKNHLPPVVSVSNGQYVL--GQPV 224
>gi|238755088|ref|ZP_04616435.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473]
gi|238706648|gb|EEP99018.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473]
Length = 240
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LL AL I C + S+ A P++ + Q +S + I+IFK E LE++
Sbjct: 6 LLLALII----CLPAVSVTSSASEPVTMAKELKQQLLGSSVY----IQIFKEERTLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY LL+ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 58 R-LQGEYRLLQSYRICNFSGGLGPKRREGDFKSPEGFYSIDMQHLKPDSKFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N+FDK+ +G LMIHG+C S GCYAM + M EI+ V+ + N QS + I +PFR
Sbjct: 117 NDFDKSQGYSGKYLMIHGDCQSIGCYAMTDAYMDEIFNYVKMAFI-NGQSKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NMQ ++N+ +FW L+ G+ YF KN P + +IN QYV
Sbjct: 176 MTEQNMQRHRNSTYINFWRQLQPGYTYFAKNRMPPPVGVINGQYV 220
>gi|227113590|ref|ZP_03827246.1| hypothetical protein PcarbP_11527 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 244
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A PL+ I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASEIAP-PLAP---IAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NM ++N+ SFW L+ G+ YF +++Q P + + N QYV
Sbjct: 180 MTEQNMHRHRNSTYASFWKQLQPGYAYFNQHNQPPAVTVFNGQYV 224
>gi|161616283|ref|YP_001590248.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365647|gb|ABX69415.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 239
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP IRI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWVSANNKPYELYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L Q ++ + FPF M +NM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKNVPVHIFPFTMDDENMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|261822679|ref|YP_003260785.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
gi|261606692|gb|ACX89178.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
Length = 244
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 135/225 (60%), Gaps = 6/225 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + S + PL+ I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVT-SAASETSPPLAP---IAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSHYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M IY +LR N Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDVIYRYAEAALR-NGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYV 224
>gi|320178956|gb|EFW53918.1| hypothetical protein SGB_03903 [Shigella boydii ATCC 9905]
Length = 246
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L QS +Q+ +PFRMT NMQ ++ + FW LKLG+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QSSVQVSIYPFRMTDANMQRHKYSNFKDFWEQLKLGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|318604536|emb|CBY26034.1| putative exported protein STY0357 [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 257
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
++FA+ I C + S A P + + + Q +S + I+IFK E LE++
Sbjct: 11 IMFAMII----CLPAVSFTSSASEPAAVSKELKQQLLGSSVY----IQIFKEERTLELYA 62
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 63 R-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINIGFP 121
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFR
Sbjct: 122 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFR 180
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T
Sbjct: 181 MTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231
>gi|293392677|ref|ZP_06636996.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582]
gi|291424794|gb|EFE98004.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582]
Length = 258
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 135/231 (58%), Gaps = 17/231 (7%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ + ++ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PETPVVKQQLLG---------SPVYIQIFKEERKLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ + IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNTFPICNYSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++D++ +GA LMIHGEC S GCYAM N M EIY V + QS + I +
Sbjct: 113 GFPNDYDRSQGYSGAYLMIHGECKSIGCYAMTNDYMDEIYRYVEAAF-AYGQSRVNISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
PFRMT +N+Q ++++ SFW LK G+DYF KNHQ P + + N QYV K
Sbjct: 172 PFRMTEQNLQRHRSSTYASFWRQLKPGYDYFVKNHQPPMMGVANGQYVLGK 222
>gi|332160663|ref|YP_004297240.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664893|gb|ADZ41537.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862520|emb|CBX72677.1| uncharacterized protein yafK [Yersinia enterocolitica W22703]
Length = 251
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 10/231 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
++FA+ I C + S A P + + + Q +S + I+IFK E LE++
Sbjct: 11 IMFAMII----CLPAVSFTSSASEPAAVSKELKQQLLGSSVY----IQIFKEERTLELYA 62
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 63 R-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINIGFP 121
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFR
Sbjct: 122 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFR 180
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T
Sbjct: 181 MTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231
>gi|261346249|ref|ZP_05973893.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282565557|gb|EFB71092.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 245
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I+IFK E +LE++++ D ++ L+K Y IC +SG GPK GD ++PEGFY I LN
Sbjct: 44 IQIFKQEGVLELYQKASDGKFKLVKTYPICKFSGGLGPKKIEGDLKSPEGFYQITAEQLN 103
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
PNS+++ SIN+GFPN+FDKA TG LMIHG C S GCYAM +K M EIY V +L+
Sbjct: 104 PNSQFYRSINLGFPNDFDKAQGYTGNYLMIHGSCVSTGCYAMTDKSMGEIYQTVERALQ- 162
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
N Q I + +PFRMT NM Y+N+ +Y+FW L+ +DYFE+ + +I +Y
Sbjct: 163 NGQPIIDVNIYPFRMTKTNMLRYRNSSHYAFWKQLQPAYDYFERTKTPAEVSVILGKY 220
>gi|50122394|ref|YP_051561.1| hypothetical protein ECA3471 [Pectobacterium atrosepticum SCRI1043]
gi|49612920|emb|CAG76370.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 244
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 138/225 (61%), Gaps = 6/225 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A PL+ I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASEIAP-PLAP---IAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR + Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDEIYRYADAALR-HGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NMQ ++++ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRSSTYASFWKQLQPGYTYFNQHNQPPAITVFNGQYV 224
>gi|224585075|ref|YP_002638874.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224469603|gb|ACN47433.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 239
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 32 PLSENLIISMQKKRTSPF---HP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
P E++ + ++K S HP RI K E+ LE+W + Y L K + ICAW
Sbjct: 27 PYDEDVYLPVEKPVASSLKIIHPGDQLFTRILKAEDKLELWASANNKPYKLYKTWTICAW 86
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
SG GPK + GD ++PEGFY LNPNS+Y L+ NIG+PN +D+A+ TG +M+HG
Sbjct: 87 SGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHG 146
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
C SAGCYAM + ++EIY +V +L +S + + FPF M +NM+ Q P Y+FW
Sbjct: 147 NCVSAGCYAMTDAGIEEIYQLVAQALNSGQKS-VPVHIFPFTMNDENMRQAQAWPEYNFW 205
Query: 206 NMLKLGHDYFEKNHQEPFIQIINKQY 231
MLK G+DYFEKN + P I + N++Y
Sbjct: 206 RMLKPGYDYFEKNRRLPTITVENRRY 231
>gi|317493141|ref|ZP_07951564.1| ykud domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918801|gb|EFV40137.1| ykud domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 241
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 140/227 (61%), Gaps = 12/227 (5%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEH-PLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
I L A+F L S S ++A++ PL + ++ P I+IFK E LE+
Sbjct: 5 IALLAVFFVLPLTSCSSSASEQAQNTPLVKQQLLG---------SPVYIQIFKEERKLEL 55
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + V +Y L++ + IC +SG GPK GD ++PEGFY + +L PNSK++ +INIG
Sbjct: 56 FAK-VQDKYQLVQSFNICKFSGGLGPKRTEGDFKSPEGFYQVDARHLKPNSKFYQAINIG 114
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN +D+AH +G LMIHG+C S GCYAM N+ + +IY V+ + R N Q+ + I +P
Sbjct: 115 YPNAYDQAHGYSGKYLMIHGDCVSIGCYAMTNEGISQIYTYVQSAFR-NGQTLVNINIYP 173
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
FRMT +NMQ ++N+ FW L+ G+ YF ++HQ P + ++N QYV
Sbjct: 174 FRMTEQNMQRHRNSDYLPFWKQLQPGYAYFNEHHQPPMVNVVNGQYV 220
>gi|238793948|ref|ZP_04637567.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC
29909]
gi|238726715|gb|EEQ18250.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC
29909]
Length = 235
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 126/200 (63%), Gaps = 2/200 (1%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
SE + +S + K+ I+IFK E LE++ R + EY L++ Y+IC +SG GPK
Sbjct: 13 SEPVAVSKELKQQLLGSSVYIQIFKEERTLELYAR-LQGEYRLVQSYRICEFSGGLGPKR 71
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY I +L P+SK++ +INIGFPN++DK+ +G LMIHG C S GCY
Sbjct: 72 REGDFKSPEGFYSIDMRHLKPDSKFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCY 131
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + M EI+ V+ + Q + I +PFRMT +NMQ ++N+ +YSFW L+ G+
Sbjct: 132 AMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFRMTEQNMQRHRNSSDYSFWRQLQPGYA 190
Query: 214 YFEKNHQEPFIQIINKQYVF 233
YF KN P + +IN QYV
Sbjct: 191 YFTKNRMPPSVAVINGQYVL 210
>gi|253990732|ref|YP_003042088.1| exported protein YafK [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253782182|emb|CAQ85346.1| putative exported protein YafK [Photorhabdus asymbiotica]
Length = 244
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 1/183 (0%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P I+IFK E ILE++ ++ Y L K Y IC +SG GPK GD ++PEGFY +
Sbjct: 40 YPVFIQIFKEERILELYTKDSHGNYQLAKSYPICNYSGGLGPKTMEGDLKSPEGFYRVKT 99
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+ LNPNS+Y+ SIN+GFPNE+DK+ +G LMIHGEC S GCYAM N M EIY V
Sbjct: 100 SQLNPNSRYYRSINLGFPNEYDKSRGYSGNYLMIHGECKSVGCYAMTNNYMNEIYHYVES 159
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+L N Q I I +PFRMT +NM +Q + +Y FW L+ ++YF K + I +IN
Sbjct: 160 ALL-NGQYEINISIYPFRMTPQNMLRHQASSHYMFWLQLQPAYEYFIKTRRPAAISVINN 218
Query: 230 QYV 232
QY
Sbjct: 219 QYA 221
>gi|194432691|ref|ZP_03064976.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194418953|gb|EDX35037.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|332094988|gb|EGJ00027.1| hypothetical protein SB521682_0312 [Shigella boydii 5216-82]
gi|332097308|gb|EGJ02289.1| hypothetical protein SD15574_0703 [Shigella dysenteriae 155-74]
Length = 246
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L QS +Q+ +PFRMT NMQ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QSSVQVSIYPFRMTDANMQRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|170767696|ref|ZP_02902149.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170123184|gb|EDS92115.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 246
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 6/228 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IAFILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPIVSVVNGRYVVSK 225
>gi|320540146|ref|ZP_08039801.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320029812|gb|EFW11836.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 253
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 2/183 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E LE++ + D ++ L K ++IC++SG GPK + GD ++PEGFY I
Sbjct: 40 PVYIQIFKEERTLELYTKIGD-QFRLAKSFRICSFSGGLGPKRQQGDFKSPEGFYSIDVR 98
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+L P+S+Y+ +INIGFPN++DKA +GA LMIHGEC S GCYAM N M EIY V +
Sbjct: 99 HLKPDSQYYRAINIGFPNDYDKAQGYSGAYLMIHGECKSIGCYAMTNTAMGEIYRYVAAA 158
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
QS I I +PFRMT +N+Q ++++ +FW L+ G++YF KN Q P + + N Q
Sbjct: 159 F-AYGQSRIDISIYPFRMTKQNLQRHRSSSYIAFWRQLEPGYNYFVKNQQPPRMAVANGQ 217
Query: 231 YVF 233
YV
Sbjct: 218 YVL 220
>gi|304395395|ref|ZP_07377278.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
gi|304356689|gb|EFM21053.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
Length = 248
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ +S + K+ P I+IFK E LE++ + + EY LL Y+IC +SG G
Sbjct: 23 EPVQTAAPVSKELKKQLLGTPVYIQIFKEERTLELYGK-IGNEYRLLDTYRICNFSGGLG 81
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PK GD ++PEGFY + N L P+S+++ +INIGFPN+FD+ +G LMIHG+C S
Sbjct: 82 PKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIGFPNQFDRNQGYSGNYLMIHGDCKSI 141
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GCYAM N M EI+ V +LR N Q + I +PFRMT NMQ ++ + + SFW L+
Sbjct: 142 GCYAMTNAYMDEIFTYVNAALR-NGQQDVSISIYPFRMTDSNMQRHRYSSDASFWQQLQP 200
Query: 211 GHDYFEKNHQEPFIQIINKQYV 232
G+ YF K HQ P + + + +YV
Sbjct: 201 GYAYFAKYHQPPTVNVASGKYV 222
>gi|183596299|ref|ZP_02958327.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827]
gi|188023899|gb|EDU61939.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827]
Length = 245
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I+IFK E +LE++++ + +Y L K Y IC +SG GPK GD ++PEGFY I + LN
Sbjct: 44 IQIFKQEGVLELYQKAPNGKYNLSKTYPICKFSGGLGPKKREGDLKSPEGFYQITASQLN 103
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
PNS+Y+ SIN+GFPNE+D+A G LMIHG+C S GCYAM +K M EIY V + +
Sbjct: 104 PNSRYYRSINLGFPNEYDRAQGYEGNYLMIHGDCVSVGCYAMTDKYMSEIYQTVESAFKS 163
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
Q+ I + +PFRMT +NM +++N+ +Y+FW LK +DYF+ + I + + +Y
Sbjct: 164 G-QNTIDVSIYPFRMTKENMLIHRNSSHYAFWQQLKPAYDYFQDAGKPAQISVTSGKYA 221
>gi|218547671|ref|YP_002381462.1| hypothetical protein EFER_0250 [Escherichia fergusonii ATCC 35469]
gi|218355212|emb|CAQ87819.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 246
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NMQ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMQRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|268593097|ref|ZP_06127318.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291311366|gb|EFE51819.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 245
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I+IFK E +LE++++ +Y L K Y IC +SG GPK GD ++PEGFY I LN
Sbjct: 44 IQIFKQEGLLELYQKTPSGKYKLSKTYPICKFSGGLGPKKIEGDLKSPEGFYQITAEQLN 103
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
PNS+Y+ SINIGFPNEFDKA +G+ LMIHG C S GCYAM +K M EIY V +L
Sbjct: 104 PNSRYYRSINIGFPNEFDKAQGYSGSYLMIHGSCVSVGCYAMTDKYMGEIYQTVETALLS 163
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
QS I + +PF+MT++NM Y+N+ +Y+FW L+ ++YF + + + + +Y
Sbjct: 164 G-QSVINVSIYPFKMTNENMLRYRNSSHYAFWKQLQPAYEYFNRTGRPAEVSVALGKYA 221
>gi|323963534|gb|EGB59092.1| ykud domain-containing protein [Escherichia coli H489]
Length = 246
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + D +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGD-QYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|324111217|gb|EGC05200.1| ykud domain-containing protein [Escherichia fergusonii B253]
gi|325496147|gb|EGC94006.1| hypothetical protein ECD227_0244 [Escherichia fergusonii ECD227]
Length = 246
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRN 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +
Sbjct: 102 QLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +
Sbjct: 162 LVFG-QPSVQVSIYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|15799929|ref|NP_285941.1| hypothetical protein Z0282 [Escherichia coli O157:H7 EDL933]
gi|15829505|ref|NP_308278.1| hypothetical protein ECs0251 [Escherichia coli O157:H7 str. Sakai]
gi|16128210|ref|NP_414759.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|74310866|ref|YP_309285.1| hypothetical protein SSON_0266 [Shigella sonnei Ss046]
gi|82542817|ref|YP_406764.1| hypothetical protein SBO_0215 [Shigella boydii Sb227]
gi|82775615|ref|YP_401962.1| hypothetical protein SDY_0250 [Shigella dysenteriae Sd197]
gi|89107099|ref|AP_000879.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|91209312|ref|YP_539298.1| hypothetical protein UTI89_C0264 [Escherichia coli UTI89]
gi|110640461|ref|YP_668189.1| hypothetical protein ECP_0254 [Escherichia coli 536]
gi|117622528|ref|YP_851441.1| hypothetical protein APECO1_1743 [Escherichia coli APEC O1]
gi|157156909|ref|YP_001461413.1| hypothetical protein EcE24377A_0256 [Escherichia coli E24377A]
gi|157159707|ref|YP_001457025.1| hypothetical protein EcHS_A0252 [Escherichia coli HS]
gi|168750207|ref|ZP_02775229.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757252|ref|ZP_02782259.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168763465|ref|ZP_02788472.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168770022|ref|ZP_02795029.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776136|ref|ZP_02801143.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168782984|ref|ZP_02807991.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168789696|ref|ZP_02814703.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168800338|ref|ZP_02825345.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170021388|ref|YP_001726342.1| hypothetical protein EcolC_3396 [Escherichia coli ATCC 8739]
gi|170079853|ref|YP_001729173.1| hypothetical protein ECDH10B_0206 [Escherichia coli str. K-12
substr. DH10B]
gi|170680694|ref|YP_001742344.1| hypothetical protein EcSMS35_0235 [Escherichia coli SMS-3-5]
gi|187731026|ref|YP_001879020.1| hypothetical protein SbBS512_E0219 [Shigella boydii CDC 3083-94]
gi|188494558|ref|ZP_03001828.1| conserved hypothetical protein [Escherichia coli 53638]
gi|191165732|ref|ZP_03027571.1| conserved hypothetical protein [Escherichia coli B7A]
gi|191171355|ref|ZP_03032904.1| conserved hypothetical protein [Escherichia coli F11]
gi|193063243|ref|ZP_03044334.1| conserved hypothetical protein [Escherichia coli E22]
gi|193068636|ref|ZP_03049597.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194427590|ref|ZP_03060138.1| conserved hypothetical protein [Escherichia coli B171]
gi|194438191|ref|ZP_03070283.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|195938627|ref|ZP_03084009.1| hypothetical protein EscherichcoliO157_19732 [Escherichia coli
O157:H7 str. EC4024]
gi|208808317|ref|ZP_03250654.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208813045|ref|ZP_03254374.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208818968|ref|ZP_03259288.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209400375|ref|YP_002268852.1| hypothetical protein ECH74115_0267 [Escherichia coli O157:H7 str.
EC4115]
gi|209917436|ref|YP_002291520.1| hypothetical protein ECSE_0245 [Escherichia coli SE11]
gi|215485377|ref|YP_002327808.1| hypothetical protein E2348C_0221 [Escherichia coli O127:H6 str.
E2348/69]
gi|217324922|ref|ZP_03441006.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218552829|ref|YP_002385742.1| hypothetical protein ECIAI1_0264 [Escherichia coli IAI1]
gi|218557182|ref|YP_002390095.1| hypothetical protein ECS88_0261 [Escherichia coli S88]
gi|218688119|ref|YP_002396331.1| hypothetical protein ECED1_0258 [Escherichia coli ED1a]
gi|218693708|ref|YP_002401375.1| hypothetical protein EC55989_0248 [Escherichia coli 55989]
gi|218698832|ref|YP_002406461.1| hypothetical protein ECIAI39_0428 [Escherichia coli IAI39]
gi|218703497|ref|YP_002411016.1| hypothetical protein ECUMN_0245 [Escherichia coli UMN026]
gi|237707757|ref|ZP_04538238.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238899616|ref|YP_002925412.1| hypothetical protein BWG_0210 [Escherichia coli BW2952]
gi|253774752|ref|YP_003037583.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160340|ref|YP_003043448.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606]
gi|254791383|ref|YP_003076220.1| secreted protein [Escherichia coli O157:H7 str. TW14359]
gi|256020199|ref|ZP_05434064.1| secreted protein [Shigella sp. D9]
gi|256024132|ref|ZP_05437997.1| secreted protein [Escherichia sp. 4_1_40B]
gi|260842470|ref|YP_003220248.1| hypothetical protein ECO103_0240 [Escherichia coli O103:H2 str.
12009]
gi|260853439|ref|YP_003227330.1| hypothetical protein ECO26_0240 [Escherichia coli O26:H11 str.
11368]
gi|260866384|ref|YP_003232786.1| hypothetical protein ECO111_0246 [Escherichia coli O111:H- str.
11128]
gi|261223721|ref|ZP_05938002.1| secreted protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261255870|ref|ZP_05948403.1| hypothetical protein EscherichiacoliO157EcO_08563 [Escherichia coli
O157:H7 str. FRIK966]
gi|291281068|ref|YP_003497886.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str.
CB9615]
gi|293403327|ref|ZP_06647418.1| yafK protein [Escherichia coli FVEC1412]
gi|293408342|ref|ZP_06652181.1| conserved hypothetical protein [Escherichia coli B354]
gi|293413502|ref|ZP_06656151.1| yafK protein [Escherichia coli B185]
gi|293418341|ref|ZP_06660776.1| yafK protein [Escherichia coli B088]
gi|297516867|ref|ZP_06935253.1| hypothetical protein EcolOP_04451 [Escherichia coli OP50]
gi|298378939|ref|ZP_06988820.1| yafK protein [Escherichia coli FVEC1302]
gi|300817300|ref|ZP_07097518.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300823437|ref|ZP_07103567.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300896713|ref|ZP_07115223.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300902530|ref|ZP_07120508.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1]
gi|300919505|ref|ZP_07136003.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300921963|ref|ZP_07138109.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1]
gi|300929530|ref|ZP_07144996.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300936093|ref|ZP_07151034.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300947280|ref|ZP_07161483.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955698|ref|ZP_07168048.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1]
gi|300991167|ref|ZP_07179510.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1]
gi|301019115|ref|ZP_07183319.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|301302026|ref|ZP_07208159.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1]
gi|301325431|ref|ZP_07218917.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301646781|ref|ZP_07246635.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306813332|ref|ZP_07447525.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101]
gi|307136829|ref|ZP_07496185.1| hypothetical protein EcolH7_01679 [Escherichia coli H736]
gi|307315226|ref|ZP_07594805.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
gi|309787090|ref|ZP_07681702.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|309797867|ref|ZP_07692249.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312964717|ref|ZP_07778968.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312970348|ref|ZP_07784529.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331640684|ref|ZP_08341831.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736]
gi|331645390|ref|ZP_08346494.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605]
gi|331651155|ref|ZP_08352180.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718]
gi|331661622|ref|ZP_08362545.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143]
gi|331666518|ref|ZP_08367392.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271]
gi|331671775|ref|ZP_08372571.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280]
gi|331675908|ref|ZP_08376625.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591]
gi|332281361|ref|ZP_08393774.1| conserved hypothetical protein [Shigella sp. D9]
gi|76365082|sp|P0AA99|YAFK_ECOLI RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor
gi|90101608|sp|P0AAA0|YAFK_ECO57 RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor
gi|12512995|gb|AAG54549.1|AE005201_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|984580|dbj|BAA07586.1| YafK [Escherichia coli W3110]
gi|1552794|gb|AAB08646.1| hypothetical [Escherichia coli]
gi|1786418|gb|AAC73328.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|4902960|dbj|BAA77894.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13359708|dbj|BAB33674.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|59889755|emb|CAH19110.1| Hypothetical exported protein [Escherichia coli]
gi|73854343|gb|AAZ87050.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81239763|gb|ABB60473.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81244228|gb|ABB64936.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|91070886|gb|ABE05767.1| probable membrane protein [Escherichia coli UTI89]
gi|110342053|gb|ABG68290.1| putative periplasmic protein [Escherichia coli 536]
gi|115511652|gb|ABI99726.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157065387|gb|ABV04642.1| conserved hypothetical protein [Escherichia coli HS]
gi|157078939|gb|ABV18647.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169756316|gb|ACA79015.1| protein of unknown function DUF949 [Escherichia coli ATCC 8739]
gi|169887688|gb|ACB01395.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170518412|gb|ACB16590.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187428018|gb|ACD07292.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|187768412|gb|EDU32256.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188015594|gb|EDU53716.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188489757|gb|EDU64860.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188999628|gb|EDU68614.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355746|gb|EDU74165.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361102|gb|EDU79521.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366356|gb|EDU84772.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189370756|gb|EDU89172.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189377308|gb|EDU95724.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|190904239|gb|EDV63949.1| conserved hypothetical protein [Escherichia coli B7A]
gi|190908289|gb|EDV67879.1| conserved hypothetical protein [Escherichia coli F11]
gi|192931151|gb|EDV83754.1| conserved hypothetical protein [Escherichia coli E22]
gi|192957999|gb|EDV88441.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194414360|gb|EDX30634.1| conserved hypothetical protein [Escherichia coli B171]
gi|194422855|gb|EDX38850.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728118|gb|EDZ77719.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208734322|gb|EDZ83009.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208739091|gb|EDZ86773.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209161775|gb|ACI39208.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209745414|gb|ACI71014.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745416|gb|ACI71015.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745418|gb|ACI71016.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745420|gb|ACI71017.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745422|gb|ACI71018.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209910695|dbj|BAG75769.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215263449|emb|CAS07769.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217321143|gb|EEC29567.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218350440|emb|CAU96127.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218359597|emb|CAQ97138.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218363951|emb|CAR01616.1| conserved hypothetical protein [Escherichia coli S88]
gi|218368818|emb|CAR16566.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218425683|emb|CAR06473.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|218430594|emb|CAR11460.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222032074|emb|CAP74813.1| Uncharacterized protein yafK [Escherichia coli LF82]
gi|226898967|gb|EEH85226.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238860270|gb|ACR62268.1| conserved protein [Escherichia coli BW2952]
gi|242376055|emb|CAQ30740.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253325796|gb|ACT30398.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972241|gb|ACT37912.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606]
gi|253976450|gb|ACT42120.1| hypothetical protein ECD_00219 [Escherichia coli BL21(DE3)]
gi|254590783|gb|ACT70144.1| secreted protein [Escherichia coli O157:H7 str. TW14359]
gi|257752088|dbj|BAI23590.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257757617|dbj|BAI29114.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257762740|dbj|BAI34235.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260450580|gb|ACX41002.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
gi|281177441|dbj|BAI53771.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920018|emb|CBG33074.1| putative exported protein [Escherichia coli 042]
gi|290760941|gb|ADD54902.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str.
CB9615]
gi|291324869|gb|EFE64284.1| yafK protein [Escherichia coli B088]
gi|291429180|gb|EFF02200.1| yafK protein [Escherichia coli FVEC1412]
gi|291433560|gb|EFF06533.1| yafK protein [Escherichia coli B185]
gi|291471520|gb|EFF14003.1| conserved hypothetical protein [Escherichia coli B354]
gi|294492959|gb|ADE91715.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|298280052|gb|EFI21556.1| yafK protein [Escherichia coli FVEC1302]
gi|300305605|gb|EFJ60125.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1]
gi|300317449|gb|EFJ67233.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1]
gi|300359433|gb|EFJ75303.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300399374|gb|EFJ82912.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300405401|gb|EFJ88939.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1]
gi|300413399|gb|EFJ96709.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300421633|gb|EFK04944.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1]
gi|300453081|gb|EFK16701.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300458742|gb|EFK22235.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462529|gb|EFK26022.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300524055|gb|EFK45124.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300530276|gb|EFK51338.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842578|gb|EFK70338.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1]
gi|300847729|gb|EFK75489.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301075016|gb|EFK89822.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305854095|gb|EFM54534.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101]
gi|306905407|gb|EFN35944.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
gi|307628272|gb|ADN72576.1| hypothetical protein UM146_16085 [Escherichia coli UM146]
gi|308118551|gb|EFO55813.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308924668|gb|EFP70163.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|310336997|gb|EFQ02135.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312290738|gb|EFR18616.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312944850|gb|ADR25677.1| hypothetical protein NRG857_01235 [Escherichia coli O83:H1 str. NRG
857C]
gi|315059459|gb|ADT73786.1| conserved protein [Escherichia coli W]
gi|315134909|dbj|BAJ42068.1| hypothetical protein ECDH1ME8569_0212 [Escherichia coli DH1]
gi|315253705|gb|EFU33673.1| putative lipoprotein [Escherichia coli MS 85-1]
gi|315287788|gb|EFU47190.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315616857|gb|EFU97474.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320174233|gb|EFW49395.1| hypothetical protein SDB_03258 [Shigella dysenteriae CDC 74-1112]
gi|320186546|gb|EFW61273.1| hypothetical protein SGF_01254 [Shigella flexneri CDC 796-83]
gi|320190225|gb|EFW64875.1| hypothetical protein ECoD_01636 [Escherichia coli O157:H7 str.
EC1212]
gi|320197292|gb|EFW71908.1| hypothetical protein EcoM_00488 [Escherichia coli WV_060327]
gi|320201157|gb|EFW75740.1| hypothetical protein ECoL_01583 [Escherichia coli EC4100B]
gi|320638272|gb|EFX08000.1| hypothetical protein ECO5101_15460 [Escherichia coli O157:H7 str.
G5101]
gi|320643553|gb|EFX12720.1| hypothetical protein ECO9389_09877 [Escherichia coli O157:H- str.
493-89]
gi|320648968|gb|EFX17566.1| hypothetical protein ECO2687_16241 [Escherichia coli O157:H- str. H
2687]
gi|320654668|gb|EFX22669.1| hypothetical protein ECO7815_10427 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660236|gb|EFX27746.1| hypothetical protein ECO5905_08953 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665485|gb|EFX32547.1| hypothetical protein ECOSU61_12655 [Escherichia coli O157:H7 str.
LSU-61]
gi|323158023|gb|EFZ44124.1| hypothetical protein ECEPECA14_0131 [Escherichia coli EPECa14]
gi|323160311|gb|EFZ46264.1| hypothetical protein ECE128010_3457 [Escherichia coli E128010]
gi|323169550|gb|EFZ55222.1| hypothetical protein SS53G_0154 [Shigella sonnei 53G]
gi|323171030|gb|EFZ56679.1| hypothetical protein ECLT68_4353 [Escherichia coli LT-68]
gi|323178524|gb|EFZ64102.1| hypothetical protein ECOK1180_3037 [Escherichia coli 1180]
gi|323181517|gb|EFZ66937.1| hypothetical protein ECOK1357_5081 [Escherichia coli 1357]
gi|323191507|gb|EFZ76768.1| hypothetical protein ECRN5871_0177 [Escherichia coli RN587/1]
gi|323379983|gb|ADX52251.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
gi|323938769|gb|EGB35015.1| ykud domain-containing protein [Escherichia coli E1520]
gi|323943343|gb|EGB39496.1| ykud domain-containing protein [Escherichia coli E482]
gi|323945376|gb|EGB41430.1| ykud domain-containing protein [Escherichia coli H120]
gi|323952649|gb|EGB48518.1| ykud domain-containing protein [Escherichia coli H252]
gi|323958685|gb|EGB54386.1| ykud domain-containing protein [Escherichia coli H263]
gi|323965208|gb|EGB60666.1| ykud domain-containing protein [Escherichia coli M863]
gi|323972404|gb|EGB67611.1| ykud domain-containing protein [Escherichia coli TA007]
gi|323975957|gb|EGB71051.1| ykud domain-containing protein [Escherichia coli TW10509]
gi|324010196|gb|EGB79415.1| hypothetical protein HMPREF9532_00019 [Escherichia coli MS 57-2]
gi|324015561|gb|EGB84780.1| hypothetical protein HMPREF9533_00340 [Escherichia coli MS 60-1]
gi|324019964|gb|EGB89183.1| hypothetical protein HMPREF9542_01343 [Escherichia coli MS 117-3]
gi|324115590|gb|EGC09529.1| ykud domain-containing protein [Escherichia coli E1167]
gi|326338772|gb|EGD62591.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
1044]
gi|326342441|gb|EGD66221.1| hypothetical protein ECF_02950 [Escherichia coli O157:H7 str. 1125]
gi|327254523|gb|EGE66139.1| hypothetical protein ECSTEC7V_0277 [Escherichia coli STEC_7v]
gi|330910067|gb|EGH38577.1| putative exported protein [Escherichia coli AA86]
gi|331040058|gb|EGI12266.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736]
gi|331045552|gb|EGI17678.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605]
gi|331050896|gb|EGI22948.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718]
gi|331060044|gb|EGI32008.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143]
gi|331065742|gb|EGI37626.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271]
gi|331070764|gb|EGI42123.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280]
gi|331076468|gb|EGI47745.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591]
gi|332093730|gb|EGI98785.1| hypothetical protein SB359474_2408 [Shigella boydii 3594-74]
gi|332103713|gb|EGJ07059.1| conserved hypothetical protein [Shigella sp. D9]
gi|332341577|gb|AEE54911.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 246
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|309700456|emb|CBI99749.1| putative exported protein [Escherichia coli ETEC H10407]
Length = 246
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDTNMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|301019012|ref|ZP_07183228.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299882417|gb|EFI90628.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 246
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQHNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|308185804|ref|YP_003929935.1| hypothetical protein Pvag_0272 [Pantoea vagans C9-1]
gi|308056314|gb|ADO08486.1| Uncharacterized protein yafK precursor [Pantoea vagans C9-1]
Length = 247
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 134/225 (59%), Gaps = 9/225 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + + + P+S+ L K+ P I+IFK E LE++
Sbjct: 6 LLFAM-ILLPALSMAMTPEPVSAAPVSKEL------KKQLLGTPVYIQIFKEERTLELYG 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + E+ LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 59 K-IGNEFRLLDTYRICNFSGGLGPKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+ +G LMIHG+C S GCYAM N M EI+ V +LR N Q + I +PFR
Sbjct: 118 NQYDRNQGYSGNYLMIHGDCKSIGCYAMTNAYMDEIFTYVNAALR-NGQQDVGISIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT NMQ ++ + + SFW L+ G+ YF K HQ P + + + +YV
Sbjct: 177 MTDSNMQRHRYSSDASFWQQLQPGYAYFAKYHQPPMVNVASGKYV 221
>gi|51595236|ref|YP_069427.1| hypothetical protein YPTB0886 [Yersinia pseudotuberculosis IP
32953]
gi|153950202|ref|YP_001402128.1| hypothetical protein YpsIP31758_3169 [Yersinia pseudotuberculosis
IP 31758]
gi|186894254|ref|YP_001871366.1| hypothetical protein YPTS_0928 [Yersinia pseudotuberculosis PB1/+]
gi|51588518|emb|CAH20126.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|152961697|gb|ABS49158.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|186697280|gb|ACC87909.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis
PB1/+]
Length = 246
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I C + S A P++ + + Q +S + I+IFK E +LE++
Sbjct: 6 LLFAMII----CLPAASFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 221
>gi|170025523|ref|YP_001722028.1| hypothetical protein YPK_3306 [Yersinia pseudotuberculosis YPIII]
gi|169752057|gb|ACA69575.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis
YPIII]
Length = 246
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I C + S A P++ + + Q +S + I+IFK E +LE++
Sbjct: 6 LLFAMII----CLPAASFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTKQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 221
>gi|145600128|ref|YP_001164204.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F]
gi|145211824|gb|ABP41231.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F]
Length = 246
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I C + S A P++ + + Q +S + I+IFK E +LE++
Sbjct: 6 LLFAMII----CLPAASFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 221
>gi|26246272|ref|NP_752311.1| hypothetical protein c0374 [Escherichia coli CFT073]
gi|227884755|ref|ZP_04002560.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972]
gi|300977425|ref|ZP_07173891.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301045870|ref|ZP_07193057.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|331656306|ref|ZP_08357268.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206]
gi|331681646|ref|ZP_08382279.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299]
gi|26106670|gb|AAN78855.1|AE016756_38 Hypothetical protein yafK precursor [Escherichia coli CFT073]
gi|227838356|gb|EEJ48822.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972]
gi|300302120|gb|EFJ58505.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409835|gb|EFJ93373.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552159|gb|ADN44934.1| probable membrane protein [Escherichia coli ABU 83972]
gi|315295167|gb|EFU54502.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|315300869|gb|EFU60091.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|331054554|gb|EGI26563.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206]
gi|331080848|gb|EGI52013.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299]
Length = 246
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + ++N +YV K
Sbjct: 204 YFEQTRKPPTVSVVNGRYVVSK 225
>gi|312112882|ref|YP_004010478.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311218011|gb|ADP69379.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 288
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P IRIFK E LE+W R D+ +VL Y +C SG GPK+ GD QAPEGFY +G +
Sbjct: 84 PVFIRIFKRERELELWMRGGDS-FVLFASYPVCRHSGGLGPKLREGDRQAPEGFYTVGRS 142
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
LNPNS Y S N+G+PN +D A+ RTG+ LM+HG C S GCYAM + + EI+ +V +
Sbjct: 143 QLNPNSAYRRSFNLGYPNLYDAANGRTGSFLMVHGACLSVGCYAMTDPVIDEIWELVTAA 202
Query: 171 L-RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
L RG Q FPFRM+ ++ ++ P FW LK G+D FE + P I + K
Sbjct: 203 LDRG--QKRFSAHVFPFRMSEAHLAIHDRAPWGEFWRDLKRGYDLFEASRTPPRIGVCAK 260
Query: 230 QYVFFKGQT 238
+YV G
Sbjct: 261 RYVARSGAA 269
>gi|295096900|emb|CBK85990.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 246
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLFVK-MGETYQLLDSYKICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+++ +INIGFPN FD+AH G LMIHG C S GCY
Sbjct: 85 RQGDFKSPEGFYNVQRNQLKPDSRFYKAINIGFPNAFDRAHGYEGKYLMIHGACVSVGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q ++Q+ +PFRMT NM ++ + FW LK G+D
Sbjct: 145 AMTDSGIDEIFQFVTGALVFG-QPNVQVSIYPFRMTDANMARHKYSVYTDFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ H+ P + I+N +YV K
Sbjct: 204 YFEQTHKPPVVSIVNGRYVVSK 225
>gi|224582153|ref|YP_002635951.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224466680|gb|ACN44510.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 245
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 7/228 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + P++ +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLMPCVSFAGLLSSS--PVTP---VSKEYKQQLMGSPVYIQIFKEERTLDLYV 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 59 K-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 118 NAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALVFG-QPSVQVSIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
MT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K
Sbjct: 177 MTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSK 224
>gi|161504584|ref|YP_001571696.1| hypothetical protein SARI_02698 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865931|gb|ABX22554.1| hypothetical protein SARI_02698 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 246
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRN 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 102 QLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +
Sbjct: 162 LIFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPIVSIVDGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|110804363|ref|YP_687883.1| hypothetical protein SFV_0304 [Shigella flexneri 5 str. 8401]
gi|110613911|gb|ABF02578.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 246
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + + N +YV K
Sbjct: 204 YFEQTRKPPTVSVANGRYVVSK 225
>gi|213622012|ref|ZP_03374795.1| hypothetical protein SentesTyp_32601 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 242
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 39 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRN 97
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 98 QLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAA 157
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +
Sbjct: 158 LVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGR 216
Query: 231 YVFFK 235
YV K
Sbjct: 217 YVVSK 221
>gi|16759307|ref|NP_454924.1| hypothetical protein STY0357 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16763695|ref|NP_459310.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414560|ref|YP_151635.1| hypothetical protein SPA2443 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615518|ref|YP_001589483.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553102|ref|ZP_02346852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993330|ref|ZP_02574425.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168232267|ref|ZP_02657325.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238582|ref|ZP_02663640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240051|ref|ZP_02664983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261273|ref|ZP_02683246.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465386|ref|ZP_02699268.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168819097|ref|ZP_02831097.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194445276|ref|YP_002039554.1| hypothetical protein SNSL254_A0351 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451114|ref|YP_002044296.1| hypothetical protein SeHA_C0353 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469639|ref|ZP_03075623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194738370|ref|YP_002113338.1| hypothetical protein SeSA_A0361 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251197|ref|YP_002145294.1| hypothetical protein SeAg_B0346 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264992|ref|ZP_03165066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363490|ref|YP_002143127.1| hypothetical protein SSPA2281 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198244473|ref|YP_002214267.1| hypothetical protein SeD_A0342 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389854|ref|ZP_03216465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204926845|ref|ZP_03218047.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351636|ref|YP_002225437.1| hypothetical protein SG0323 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855797|ref|YP_002242448.1| hypothetical protein SEN0295 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213162132|ref|ZP_03347842.1| hypothetical protein Salmoneentericaenterica_19903 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213425139|ref|ZP_03357889.1| hypothetical protein SentesTyphi_05232 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580522|ref|ZP_03362348.1| hypothetical protein SentesTyph_04605 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213649645|ref|ZP_03379698.1| hypothetical protein SentesTy_21510 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852431|ref|ZP_03381963.1| hypothetical protein SentesT_05809 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|238913298|ref|ZP_04657135.1| hypothetical protein SentesTe_19534 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|25359104|pir||AF0542 probable exported protein STY0357 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16418814|gb|AAL19269.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16501598|emb|CAD08782.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138552|gb|AAO70122.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128817|gb|AAV78323.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364882|gb|ABX68650.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403939|gb|ACF64161.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409418|gb|ACF69637.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456003|gb|EDX44842.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713872|gb|ACF93093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631687|gb|EDX50207.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094967|emb|CAR60504.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214900|gb|ACH52297.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243247|gb|EDY25867.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288566|gb|EDY27943.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938989|gb|ACH76322.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602299|gb|EDZ00845.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323510|gb|EDZ08705.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271417|emb|CAR36225.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322377|gb|EDZ10216.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328600|gb|EDZ15364.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333436|gb|EDZ20200.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339945|gb|EDZ26709.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344088|gb|EDZ30852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349892|gb|EDZ36523.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707600|emb|CAR31882.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245538|emb|CBG23332.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992006|gb|ACY86891.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301156928|emb|CBW16409.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911281|dbj|BAJ35255.1| hypothetical protein STMDT12_C03120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084567|emb|CBY94359.1| Uncharacterized protein yafK Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224973|gb|EFX50034.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614605|gb|EFY11534.1| hypothetical protein SEEM315_18260 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620124|gb|EFY16996.1| hypothetical protein SEEM971_15976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623418|gb|EFY20257.1| hypothetical protein SEEM973_06381 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629284|gb|EFY26063.1| hypothetical protein SEEM974_10053 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632004|gb|EFY28758.1| hypothetical protein SEEM201_09219 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637258|gb|EFY33960.1| hypothetical protein SEEM202_19419 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642455|gb|EFY39057.1| hypothetical protein SEEM954_06651 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646291|gb|EFY42805.1| hypothetical protein SEEM054_13439 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652440|gb|EFY48794.1| hypothetical protein SEEM675_07516 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653398|gb|EFY49731.1| hypothetical protein SEEM965_19094 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660454|gb|EFY56690.1| hypothetical protein SEEM19N_20333 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664606|gb|EFY60799.1| hypothetical protein SEEM801_06827 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669341|gb|EFY65491.1| hypothetical protein SEEM507_01020 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670887|gb|EFY67020.1| hypothetical protein SEEM877_06777 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678874|gb|EFY74929.1| hypothetical protein SEEM867_12580 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681903|gb|EFY77928.1| hypothetical protein SEEM180_16648 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322688029|gb|EFY83995.1| hypothetical protein SEEM600_10966 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323128630|gb|ADX16060.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194384|gb|EFZ79579.1| hypothetical protein SEEM581_21779 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197799|gb|EFZ82931.1| hypothetical protein SEEM501_21865 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203405|gb|EFZ88430.1| hypothetical protein SEEM460_07235 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206850|gb|EFZ91803.1| hypothetical protein SEEM020_02859 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210381|gb|EFZ95273.1| hypothetical protein SEEM6152_05557 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214623|gb|EFZ99374.1| hypothetical protein SEEM0077_18315 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223179|gb|EGA07522.1| hypothetical protein SEEM0047_02263 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224850|gb|EGA09113.1| hypothetical protein SEEM0055_09708 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230054|gb|EGA14174.1| hypothetical protein SEEM0052_01612 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233792|gb|EGA17881.1| hypothetical protein SEEM3312_07268 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238514|gb|EGA22572.1| hypothetical protein SEEM5258_09642 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244202|gb|EGA28211.1| hypothetical protein SEEM1156_09570 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246362|gb|EGA30345.1| hypothetical protein SEEM9199_11783 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251988|gb|EGA35851.1| hypothetical protein SEEM8282_14497 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257985|gb|EGA41664.1| hypothetical protein SEEM8283_03816 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259918|gb|EGA43549.1| hypothetical protein SEEM8284_22115 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265068|gb|EGA48567.1| hypothetical protein SEEM8285_20274 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272631|gb|EGA56038.1| hypothetical protein SEEM8287_15049 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326622011|gb|EGE28356.1| Putative L,D-transpeptidase YafK [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326626667|gb|EGE33010.1| Putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987261|gb|AEF06244.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 246
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRN 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 102 QLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +
Sbjct: 162 LVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|24111717|ref|NP_706227.1| hypothetical protein SF0274 [Shigella flexneri 2a str. 301]
gi|30061843|ref|NP_836014.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T]
gi|24050497|gb|AAN41934.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040087|gb|AAP15820.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T]
gi|281599636|gb|ADA72620.1| hypothetical protein SFxv_0291 [Shigella flexneri 2002017]
gi|332761624|gb|EGJ91904.1| hypothetical protein SF434370_0458 [Shigella flexneri 4343-70]
gi|332761650|gb|EGJ91929.1| hypothetical protein SF274771_0338 [Shigella flexneri 2747-71]
gi|332764441|gb|EGJ94674.1| hypothetical protein SFK671_0303 [Shigella flexneri K-671]
gi|332768573|gb|EGJ98755.1| hypothetical protein SF293071_0385 [Shigella flexneri 2930-71]
gi|333008739|gb|EGK28203.1| hypothetical protein SFK218_0538 [Shigella flexneri K-218]
gi|333009705|gb|EGK29155.1| hypothetical protein SFVA6_0548 [Shigella flexneri VA-6]
gi|333010776|gb|EGK30202.1| hypothetical protein SFK272_0599 [Shigella flexneri K-272]
gi|333021274|gb|EGK40527.1| hypothetical protein SFK227_0257 [Shigella flexneri K-227]
gi|333022083|gb|EGK41326.1| hypothetical protein SFK304_0403 [Shigella flexneri K-304]
Length = 246
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 145 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + + N +YV K
Sbjct: 204 YFEQTRKPPTVSVANGRYVVSK 225
>gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 290
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
++ + Y LLK Y I WS GPK + GD QAPEGFY I +NPNS Y+LS ++G
Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN D+A TG +M+HG C+SAGC+AM + M EIYA+ R++ G Q Q Q++P
Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNGG-QRAFQFQSYP 121
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FRMT+ N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 122 FRMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169
>gi|62178883|ref|YP_215300.1| hypothetical protein SC0313 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126516|gb|AAX64219.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713335|gb|EFZ04906.1| hypothetical protein SCA50_0331 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 207
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 4 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRN 62
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 63 QLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAA 122
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +
Sbjct: 123 LVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGR 181
Query: 231 YVFFK 235
YV K
Sbjct: 182 YVVSK 186
>gi|313646642|gb|EFS11101.1| hypothetical protein SF2457T_4830 [Shigella flexneri 2a str. 2457T]
Length = 237
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 17 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQ 75
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 76 RQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCY 135
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM N+ + EI+ V +L Q +Q+ +PFRMT NM+ ++ + FW LK G+D
Sbjct: 136 AMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYD 194
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ + P + + N +YV K
Sbjct: 195 YFEQTRKPPTVSVANGRYVVSK 216
>gi|146310424|ref|YP_001175498.1| hypothetical protein Ent638_0761 [Enterobacter sp. 638]
gi|145317300|gb|ABP59447.1| protein of unknown function DUF949 [Enterobacter sp. 638]
Length = 246
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S IS + K+ P I+IFK E L+++ + + Y LL YKIC++SG GPK
Sbjct: 26 SSTTPISKEYKQQLMGSPVYIQIFKEERTLDLFVK-MGETYQLLDSYKICSYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCY
Sbjct: 85 RQGDFKSPEGFYTVQRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q+ +Q+ +PFRMT NMQ ++ + FW LK G+D
Sbjct: 145 AMTDGGIDEIFQFVTGALVFG-QAGVQVSIYPFRMTDANMQRHKFSTYSEFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ H+ P + + + +Y+ K
Sbjct: 204 YFEQTHKPPTVSVADGRYIVSK 225
>gi|108808723|ref|YP_652639.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua]
gi|149364916|ref|ZP_01886951.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162420212|ref|YP_001607663.1| hypothetical protein YpAngola_A3319 [Yersinia pestis Angola]
gi|165926620|ref|ZP_02222452.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936078|ref|ZP_02224648.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010974|ref|ZP_02231872.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212890|ref|ZP_02238925.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398650|ref|ZP_02304174.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421605|ref|ZP_02313358.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167467189|ref|ZP_02331893.1| hypothetical protein YpesF_04645 [Yersinia pestis FV-1]
gi|218930268|ref|YP_002348143.1| hypothetical protein YPO3241 [Yersinia pestis CO92]
gi|229838849|ref|ZP_04459008.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229895999|ref|ZP_04511169.1| secreted protein [Yersinia pestis Pestoides A]
gi|229899418|ref|ZP_04514561.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195]
gi|294504957|ref|YP_003569019.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003]
gi|108780636|gb|ABG14694.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua]
gi|115348879|emb|CAL21835.1| putative exported protein [Yersinia pestis CO92]
gi|149291329|gb|EDM41403.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162353027|gb|ABX86975.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165916223|gb|EDR34830.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921548|gb|EDR38745.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989974|gb|EDR42275.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205677|gb|EDR50157.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960524|gb|EDR56545.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051154|gb|EDR62562.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|229687820|gb|EEO79893.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195]
gi|229695215|gb|EEO85262.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700922|gb|EEO88951.1| secreted protein [Yersinia pestis Pestoides A]
gi|262363021|gb|ACY59742.1| hypothetical protein YPD4_2835 [Yersinia pestis D106004]
gi|262366945|gb|ACY63502.1| hypothetical protein YPD8_2829 [Yersinia pestis D182038]
gi|294355416|gb|ADE65757.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003]
Length = 246
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I C + S A P++ + + Q +S + I+IFK E +LE++
Sbjct: 6 LLFAMII----CLPAASFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 221
>gi|45440541|ref|NP_992080.1| hypothetical protein YP_0691 [Yersinia pestis biovar Microtus str.
91001]
gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
Length = 250
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I C + S A P++ + + Q +S + I+IFK E +LE++
Sbjct: 10 LLFAMII----CLPAASFTSSASEPVAVSKELKQQLLGSSVY----IQIFKEERVLELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 62 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 121 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 180 MTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 225
>gi|157147183|ref|YP_001454502.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895]
gi|157084388|gb|ABV14066.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895]
Length = 246
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRN 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 102 QLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L QS +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ + P + +++ +
Sbjct: 162 LVFG-QSSVQVSIYPFRMTDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|317047049|ref|YP_004114697.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
gi|316948666|gb|ADU68141.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
Length = 248
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P++ +S + K+ P I+IFK E LE++ + + EY LL Y+IC +SG G
Sbjct: 23 EPVNPQAPVSKELKKQLLGTPVYIQIFKEERTLELYGK-IGNEYRLLDSYRICNFSGGLG 81
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PK GD ++PEGFY + N L P+S Y+ +IN GFPN+FD+ + G LMIHG+C S
Sbjct: 82 PKRREGDFKSPEGFYSVKLNQLKPDSHYYRAINTGFPNQFDRDNGYNGKYLMIHGDCKSI 141
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GCYAM N M EIY V +LR N Q I + FPFRMT NMQ ++ + SFW L+
Sbjct: 142 GCYAMTNAYMDEIYTYVNAALR-NGQQEIALSIFPFRMTDSNMQRHRYSTYASFWRQLQP 200
Query: 211 GHDYFEKNHQEPFIQI 226
G+ YFEK Q P + +
Sbjct: 201 GYAYFEKYRQPPTVNV 216
>gi|283834482|ref|ZP_06354223.1| putative lipoprotein [Citrobacter youngae ATCC 29220]
gi|291070029|gb|EFE08138.1| putative lipoprotein [Citrobacter youngae ATCC 29220]
Length = 246
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + +Y LL YKIC +SG GPK
Sbjct: 26 SPTAPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + L P+S+++ +INIGFPN +D+AH G LMIHG C S GCY
Sbjct: 85 RQGDFKSPEGFYSVQRGQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGACVSVGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q +Q+ +PFRMT NMQ ++ + FW LK G+D
Sbjct: 145 AMTDNGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANMQRHKFSYYKDFWAQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ H+ P + ++N +YV K
Sbjct: 204 YFEQTHKPPTVSVVNGRYVISK 225
>gi|283784004|ref|YP_003363869.1| lipoprotein [Citrobacter rodentium ICC168]
gi|282947458|emb|CBG87005.1| putative lipoprotein [Citrobacter rodentium ICC168]
Length = 246
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 8/227 (3%)
Query: 11 ALFI--FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
ALFI L C L+ + S IS + K+ P I+IFK E L+++ +
Sbjct: 5 ALFIAMLLIPCVSFAGLLGSS----SPTTPISKEYKQQLMGSPVYIQIFKEERTLDLYVK 60
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+ +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFPN
Sbjct: 61 -MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFPN 119
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFRM
Sbjct: 120 AYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALVFG-QPSVQVSIYPFRM 178
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
T NMQ ++ + FW LK G+DYFE+ + P + +++ +YV K
Sbjct: 179 TDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGRYVVSK 225
>gi|218780861|ref|YP_002432179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
AK-01]
gi|218762245|gb|ACL04711.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
AK-01]
Length = 239
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIETGDEQAPEGFYYIGW 109
P +RIFK E LE+W + K YKI + GPK+E GD +APEGFY++
Sbjct: 55 PVFMRIFKKEKRLEVWVLK-GKRFQHFKSYKIFTYGLRGLGPKLEEGDWRAPEGFYFVPP 113
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+NP+S+Y L+ NIG+PN++D+ H RTG +M+HG C S GCYAM +K+++EIY I
Sbjct: 114 KMMNPSSRYHLAFNIGYPNKYDRRHGRTGGLIMVHGSCVSVGCYAMRDKRIEEIYTIADA 173
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+LR N Q ++ FPF MT KNM+ YQ++ + FW LK G+D FEKN P + +
Sbjct: 174 ALR-NGQPFFRVHIFPFEMTEKNMKKYQDDDWFEFWRNLKQGYDLFEKNKTPPDADVKDG 232
Query: 230 QYVF 233
+YVF
Sbjct: 233 KYVF 236
>gi|296101420|ref|YP_003611566.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055879|gb|ADF60617.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 246
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I+IFK E L+++ + + Y LL YKIC +SG GPK
Sbjct: 26 SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLFVK-MGETYQLLDSYKICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + N L P+S+++ +INIGFPN FD+AH G LMIHG C S GCY
Sbjct: 85 RQGDFKSPEGFYNVQRNQLKPDSRFYKAINIGFPNAFDRAHGYEGKYLMIHGACVSIGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q ++Q+ +PFRMT NM ++ + FW LK G+D
Sbjct: 145 AMTDSGIDEIFQFVTGALVFG-QPNVQVSIYPFRMTDANMARHKYSYYADFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ H+ P + +++ +YV K
Sbjct: 204 YFEQTHKPPVVSVVDGRYVVSK 225
>gi|254470197|ref|ZP_05083601.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062]
gi|211960508|gb|EEA95704.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062]
Length = 247
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P +R+FK E+ LE W R+ + Y K ++IC +SG GPK++ GD Q+PEGFY +
Sbjct: 65 PVFLRVFKEESRLEAWIRSGET-YHPYKSWEICKYSGDLGPKLKEGDGQSPEGFYNVSAR 123
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
LNPNS+Y LS N+GFPN FD++ RTG+ LM+HG C S GCYAM N+ ++EIY +V +
Sbjct: 124 QLNPNSQYHLSFNLGFPNTFDQSMGRTGSYLMVHGNCLSIGCYAMTNQHIEEIYLLVEAA 183
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L+ Q + + FPF MT +N+ + ++ + FW LK G+D FE+N P + Q
Sbjct: 184 LQSG-QGTVPVHIFPFEMTEENLSKHSSSKWHPFWRNLKQGYDLFEQNRIPPAVSAQEGQ 242
Query: 231 YVF 233
Y F
Sbjct: 243 YQF 245
>gi|237730216|ref|ZP_04560697.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905755|gb|EEH91673.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 246
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY +
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRG 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 102 QLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDNGIDEIFQFVTGA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L QS +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +
Sbjct: 162 LVFG-QSSVQVSIYPFRMTDANMQRHKFSYYKDFWAQLKPGYDYFEQTRKPPTVSVVNGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|291616432|ref|YP_003519174.1| YafK [Pantoea ananatis LMG 20103]
gi|291151462|gb|ADD76046.1| YafK [Pantoea ananatis LMG 20103]
gi|327392872|dbj|BAK10294.1| lipoprotein YafK [Pantoea ananatis AJ13355]
Length = 266
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 133/226 (58%), Gaps = 8/226 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ + + S+ E P+ + +S + K+ P I+IFK E LE++
Sbjct: 26 LLFAMILL-----PALSMAMTPE-PVQQLAPVSKELKKQLIGTPVYIQIFKEERTLELYG 79
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 80 K-IGNEYRLLDTYRICNFSGGLGPKRREGDFKSPEGFYSVKMNQLKPDSRFYRAINIGFP 138
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+ +G LMIHG+C S GCYAM N M +I+ V +LR N Q + I +PFR
Sbjct: 139 NQYDRDQGYSGNYLMIHGDCKSIGCYAMTNAYMDQIFTYVNAALR-NGQQEVNIAIYPFR 197
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT NMQ ++ + FW L+ G+ YF + HQ P + + + +YV
Sbjct: 198 MTESNMQRHRYSTYADFWKQLQPGYAYFAQYHQPPTVNVASGRYVM 243
>gi|261340937|ref|ZP_05968795.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC
35316]
gi|288316795|gb|EFC55733.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC
35316]
Length = 246
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S IS + K+ P I+IFK E L+++ + + Y LL YKIC +SG GPK
Sbjct: 26 SSTTPISKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGETYQLLDSYKICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + + L P+S+++ +INIGFPN FD+AH G LMIHG C S GCY
Sbjct: 85 RQGDFKSPEGFYNVQRSQLKPDSRFYKAINIGFPNAFDRAHGYEGKYLMIHGACVSVGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q ++Q+ +PFRMT NM ++ + FW LK G+D
Sbjct: 145 AMTDTGIDEIFQFVTGALVFG-QPNVQVSIYPFRMTDANMARHKYSYYADFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YFE+ H+ P + +++ +Y+ K
Sbjct: 204 YFEQTHKPPVVSVVDGRYLVSK 225
>gi|311280788|ref|YP_003943019.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
gi|308749983|gb|ADO49735.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
Length = 246
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + Y LL YKIC +SG GPK GD ++PEGFY +
Sbjct: 43 PVYIQIFKEERTLDLYVK-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVTRE 101
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +
Sbjct: 102 QLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGACVSIGCYAMTDSGIDEIFQFVTGA 161
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L QS++Q+ +PFRMT NM+ ++ + FW+ LK G+DYF + H+ P + +++ +
Sbjct: 162 LVFG-QSNVQVSIYPFRMTDANMERHKFSFYKDFWSQLKPGYDYFAQTHKPPMVSVVDGR 220
Query: 231 YVFFK 235
YV K
Sbjct: 221 YVVSK 225
>gi|329296658|ref|ZP_08253994.1| ErfK/YbiS/YcfS/YnhG family protein [Plautia stali symbiont]
Length = 247
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 128/219 (58%), Gaps = 8/219 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ + S ++ + PL+ +S + K+ P I+IFK E LE++
Sbjct: 6 LLFAMILM---PLLSWAMTPEPMQPLAP---VSKELKKQLLGTPVFIQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y+IC SG GPK GD ++PEGFY + N L P+S+++ +IN GFP
Sbjct: 60 K-IGNEYRLLDSYRICNISGGLGPKRRQGDFKSPEGFYNVKMNQLKPDSRFYRAINTGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+A G LMIHG+C S GCYAM N M EI+ V +LR N Q +Q+ FPFR
Sbjct: 119 NQYDRAKGYNGNYLMIHGDCVSVGCYAMTNASMDEIFTYVNAALR-NGQQDVQVNIFPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226
MT NMQ ++ + SFW L+ G+ YF K H P + +
Sbjct: 178 MTDSNMQRHRYSTYISFWRELQPGYAYFAKYHVPPTVNV 216
>gi|300715465|ref|YP_003740268.1| hypothetical protein EbC_08790 [Erwinia billingiae Eb661]
gi|299061301|emb|CAX58410.1| Putative exported protein [Erwinia billingiae Eb661]
Length = 246
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + S+ PL+ +S + K+ P I+IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFA-SVPTSPVLPLAP---VSKELKKQLLGTPVYIQIFKEERTLELYG 60
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL Y+IC +SG GPK GD ++PEGFY +G + L P+S+++ +IN+GFP
Sbjct: 61 K-IGNDYRLLDSYRICNFSGGLGPKRRQGDFKSPEGFYSVGLSQLKPDSRFYRAINVGFP 119
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + + +IY V +LR N Q +++ +PFR
Sbjct: 120 NEYDRQQGYEGKYLMIHGSCVSIGCYAMTDANIADIYQFVDAALR-NGQPRVEVSIYPFR 178
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT N+Q ++N+ YSFW L+ G+ F +N P + + YV
Sbjct: 179 MTDSNLQRHRNSVYYSFWKQLQPGYAQFVQNRLPPSVSVNEGHYVL 224
>gi|227357845|ref|ZP_03842193.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC
29906]
gi|227161955|gb|EEI46973.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC
29906]
Length = 250
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 11/232 (4%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MT+ L+ L I L SL AE+ S +I KK T P I+IFK E
Sbjct: 1 MTSHAKQLIIFLTIILT------SLFVNAEN--SSKFLIKPVKKSTG--EPIYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
N+LE++ D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++
Sbjct: 51 NLLELYIEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYR 110
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+IN+GFPN++D+ TG LMIHG C S GCYAM + M EIY +L+ N Q +I
Sbjct: 111 AINLGFPNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALK-NGQQNIN 169
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
I FPF+MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+
Sbjct: 170 IHIFPFKMTAENMKKFQYSANMDFWQQLAPAYQYVEEYQKIPVISVKNGRYL 221
>gi|206580035|ref|YP_002240293.1| hypothetical protein KPK_4495 [Klebsiella pneumoniae 342]
gi|288936999|ref|YP_003441058.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
gi|290509937|ref|ZP_06549307.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55]
gi|206569093|gb|ACI10869.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288891708|gb|ADC60026.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
gi|289776653|gb|EFD84651.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55]
Length = 246
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I IFK E +L+++ + + Y LL Y+IC +SG GPK
Sbjct: 26 SPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVK-MGETYQLLDSYRICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + + L P+S+++ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYSVTRSQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSVGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q +Q+ +PFRMT+ NM+ ++ + FW LK G+D
Sbjct: 145 AMTDSGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTNANMERHKYSYYADFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YF++ H+ P + + + +YV K
Sbjct: 204 YFQQTHKPPIVSVTDGRYVVSK 225
>gi|156935266|ref|YP_001439182.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894]
gi|156533520|gb|ABU78346.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894]
Length = 245
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E LE++ + + +Y LL Y+IC +SG GPK GD ++PEGFY + +
Sbjct: 42 PVYIQIFKEERTLELYVK-MGEQYQLLDSYRICNYSGGLGPKRRQGDFKSPEGFYSVQRS 100
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN FD+A+ G LMIHG C S GCYAM +K + EI+ V +
Sbjct: 101 QLKPDSRFYKAINIGFPNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGA 160
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q ++Q+ +PFRMT NM+ ++ + FW LK G+DYF Q P + ++N
Sbjct: 161 LVFG-QPNVQVSIYPFRMTDANMERHKYSYYIGFWKQLKPGYDYFMATRQPPVVSVVNGS 219
Query: 231 YVFFK 235
YV K
Sbjct: 220 YVVSK 224
>gi|296446177|ref|ZP_06888125.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
gi|296256371|gb|EFH03450.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
Length = 387
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+RIFK E LE+W + D Y L K Y IC WSG GPK+ +GD Q+PEGFY + L+
Sbjct: 185 VRIFKKEGELELWLKR-DGRYSLYKTYPICKWSGRLGPKLRSGDYQSPEGFYSVSARQLH 243
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P+S Y + NIGFPN +D+ + RTG LM+HG C S GC+AM +K ++EIY +V +LR
Sbjct: 244 PSSAYHRAFNIGFPNAYDRQNGRTGGALMVHGACKSVGCFAMTDKVIEEIYGVVEAALRA 303
Query: 174 NMQSHIQIQAFPFRMTSKNMQ---------LYQNNPNY----SFWNMLKLGHDYFEKNHQ 220
Q + + FPFRMT + + + P Y +FW LK G+D FE+ +
Sbjct: 304 G-QHEVPVHIFPFRMTEEALAKETRGDWSTFWAVPPEYQQWTAFWQNLKEGYDLFERTGE 362
Query: 221 EPFIQIINKQYVF 233
P +Y F
Sbjct: 363 PPTAYACGARYGF 375
>gi|197284252|ref|YP_002150124.1| hypothetical protein PMI0351 [Proteus mirabilis HI4320]
gi|194681739|emb|CAR40910.1| putative exported protein [Proteus mirabilis HI4320]
Length = 250
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 132/232 (56%), Gaps = 11/232 (4%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MT+ L+ L I L SL AE+ S +I KK T P I+IFK E
Sbjct: 1 MTSHAKQLIIFLTIILT------SLFVNAEN--SSKFLIKPVKKSTG--EPIYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
N+LE++ D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++
Sbjct: 51 NLLELYIEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYR 110
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+IN+GFPN++D+ TG LMIHG C S GCYAM + M EIY +L+ QS I
Sbjct: 111 AINLGFPNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALKNGQQS-IN 169
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
I FPF+MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+
Sbjct: 170 IHIFPFKMTAENMKKFQYSANMDFWQQLAPAYQYVEEYKKIPSISVKNGRYL 221
>gi|152968812|ref|YP_001333921.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893215|ref|YP_002917949.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae NTUH-K2044]
gi|262044042|ref|ZP_06017122.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330005719|ref|ZP_08305359.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3]
gi|150953661|gb|ABR75691.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545531|dbj|BAH61882.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259038614|gb|EEW39805.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536141|gb|EGF62528.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3]
Length = 246
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +S + K+ P I IFK E +L+++ + + Y LL Y+IC +SG GPK
Sbjct: 26 SPTTPVSKEYKQQLMGSPVYIEIFKEERMLDLYVK-MGETYQLLDSYRICNYSGGLGPKQ 84
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD ++PEGFY + + L P+S+++ +INIGFPN +D+AH G LMIHG+C S GCY
Sbjct: 85 RQGDFKSPEGFYNVTRSQLKPDSRFYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSVGCY 144
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM + + EI+ V +L Q +Q+ +PFRMT+ NM+ ++ + FW LK G+D
Sbjct: 145 AMTDSGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTNANMERHKYSYYADFWKQLKPGYD 203
Query: 214 YFEKNHQEPFIQIINKQYVFFK 235
YF++ H+ P + + + +YV K
Sbjct: 204 YFQQTHKPPVVSVTDGRYVVSK 225
>gi|238918831|ref|YP_002932345.1| hypothetical protein NT01EI_0895 [Edwardsiella ictaluri 93-146]
gi|238868398|gb|ACR68109.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 240
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I+IFK E LE++ + V +Y L+K + IC +SG GPK GD ++PEGFY I +L
Sbjct: 44 IQIFKEERQLELYAK-VQDKYRLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLK 102
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P+S+Y+ +INIG+PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R
Sbjct: 103 PDSRYYQAINIGYPNSFDQSHGYSGNYLMIHGDCVSIGCYAMTNDGISEIYRYVQSAFRS 162
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
Q+ + I +PFRMT +NMQL++N+ FW L+ G+ YF +N P + + + +YV
Sbjct: 163 G-QTLVNINIYPFRMTDRNMQLHRNSSYIGFWRQLQPGYQYFAQNALPPQVNVQDGRYV 220
>gi|300024685|ref|YP_003757296.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526506|gb|ADJ24975.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 318
Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100
++ K + P +IRIFK E+ LEIWK+ Y+L Y IC WSGT GPK+ GD QA
Sbjct: 52 LRDKGVTLADPILIRIFKAESELEIWKQK-GGGYILFATYPICHWSGTLGPKLRDGDRQA 110
Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
PEG+Y + + ++ S+++GFPN D++ RTG+ +++HG C+S GC+AM N
Sbjct: 111 PEGYYTLSRSQTRHVGRWPRSLDLGFPNILDQSQARTGSSILVHGGCSSIGCFAMTNPVS 170
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQ 220
EI+ + ++ G Q + + FPFRMT KN+ +P +FW LK G+D FE+ +
Sbjct: 171 DEIHQMTLAAMDGGEQI-VPVHVFPFRMTDKNLAAQDASPWKAFWTNLKEGYDLFEQTKR 229
Query: 221 EPFIQIINKQYVFFKGQ 237
P I + + +Y+F + Q
Sbjct: 230 PPIIGVCSGRYIFRETQ 246
>gi|260596636|ref|YP_003209207.1| hypothetical protein CTU_08440 [Cronobacter turicensis z3032]
gi|260215813|emb|CBA28269.1| Uncharacterized protein yafK [Cronobacter turicensis z3032]
Length = 256
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E LE++ + + +Y LL Y IC +SG GPK GD ++PEGFY + +
Sbjct: 53 PVYIQIFKEERKLELYVK-MGEQYQLLDSYNICNYSGGLGPKRRQGDFKSPEGFYSVQRS 111
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
L P+S+++ +INIGFPN FD+A+ G LMIHG C S GCYAM +K + EI+ V +
Sbjct: 112 QLKPDSRFYKAINIGFPNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGA 171
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
L Q ++Q+ +PFRMT NM+ ++ + FW LK G+DYF Q P + ++N
Sbjct: 172 LVFG-QPNVQVSIYPFRMTDANMERHKYSYYIGFWKQLKPGYDYFMTTRQPPVVSVVNGS 230
Query: 231 YVFFK 235
YV K
Sbjct: 231 YVVSK 235
>gi|292487367|ref|YP_003530239.1| hypothetical protein EAMY_0881 [Erwinia amylovora CFBP1430]
gi|292898612|ref|YP_003537981.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291198460|emb|CBJ45568.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291552786|emb|CBA19831.1| Uncharacterized protein yafK precursor [Erwinia amylovora CFBP1430]
gi|312171472|emb|CBX79730.1| Uncharacterized protein yafK precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 244
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 133/226 (58%), Gaps = 8/226 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + +++ PL+ +S + ++ P ++IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFAS--VNETITPLAP---VSKELRKQLIGIPVYLQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL + IC +SG GPK GD ++PEGFY + + L P+S+Y+ +IN+GFP
Sbjct: 60 K-IGNEYRLLNSFPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRYYRAINVGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +PFR
Sbjct: 119 NEYDRQQGYQGKYLMIHGNCVSIGCYAMTDAYMDEIYRYVEAALR-NGQPRIEVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT+ NMQ ++ + +FW L+ G+ FE+ Q P + + +YV
Sbjct: 178 MTASNMQRHRYSTYINFWKQLQPGYAQFEQTKQPPAVAVSAGKYVL 223
>gi|22124856|ref|NP_668279.1| hypothetical protein y0949 [Yersinia pestis KIM 10]
gi|108811018|ref|YP_646785.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516]
gi|229901240|ref|ZP_04516362.1| putative exported protein precursor [Yersinia pestis Nepal516]
gi|270489430|ref|ZP_06206504.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|21957687|gb|AAM84530.1|AE013698_4 hypothetical protein y0949 [Yersinia pestis KIM 10]
gi|108774666|gb|ABG17185.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516]
gi|229681169|gb|EEO77263.1| putative exported protein precursor [Yersinia pestis Nepal516]
gi|270337934|gb|EFA48711.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|320016430|gb|ADW00002.1| putative exported protein precursor [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 220
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I+IFK E +LE++ + + EY L++ Y IC +SG GPK GD ++PEGFY I +L
Sbjct: 18 IQIFKEERVLELYAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLK 76
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P+S+++ +INIGFPN++DK+ +G LMIHG C S GCYAM + M EI+ VR +
Sbjct: 77 PDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIF 136
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q + I +PFRMT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 137 G-QEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVL 195
>gi|304558183|gb|ADM40847.1| hypothetical protein ETAF_0725 [Edwardsiella tarda FL6-60]
Length = 234
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 12/226 (5%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+L L + L C S S A +L+ S I+IFK E LE++
Sbjct: 1 MLAICLALPLAACKSSASESGTAPRSGVNSLLGSQ----------VYIQIFKEERQLELY 50
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ V +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ +INIG+
Sbjct: 51 AK-VQDKYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQAINIGY 109
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + I +PF
Sbjct: 110 PNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFR-RGQTLVNINIYPF 168
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
RMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV
Sbjct: 169 RMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYV 214
>gi|269138138|ref|YP_003294838.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202]
gi|267983798|gb|ACY83627.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202]
Length = 240
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 12/226 (5%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+L L + L C S S A +L+ S I+IFK E LE++
Sbjct: 7 MLAICLALPLAACKSSASESGTAPRSGVNSLLGSQ----------VYIQIFKEERQLELY 56
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ V +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ +INIG+
Sbjct: 57 AK-VQDKYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQAINIGY 115
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + I +PF
Sbjct: 116 PNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFR-RGQTLVNINIYPF 174
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
RMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV
Sbjct: 175 RMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYV 220
>gi|320353230|ref|YP_004194569.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
2032]
gi|320121732|gb|ADW17278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
2032]
Length = 266
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 2/192 (1%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100
+Q K + P +RIFK ILE+W N + L K YK+C +SG GPKI GD QA
Sbjct: 57 LQAKGFAVGQPIFVRIFKIPGILELW-MNKGRGFELFKAYKVCNYSGFPGPKISEGDWQA 115
Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
PEGFY + LNPNS Y L+ +IG+PN FD A RTG +M+HG C S GC+AM ++++
Sbjct: 116 PEGFYSVSAEQLNPNSGYHLAFDIGYPNAFDVAKRRTGNLIMVHGNCKSVGCFAMTDRRI 175
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQ 220
+EIY + ++L Q + FPF +T +N++ + +P FW L+ G+ FE + Q
Sbjct: 176 EEIYLLAHEAL-AQGQERFDVHIFPFPLTQRNLKKFAASPWIKFWESLEPGYSAFEMSKQ 234
Query: 221 EPFIQIINKQYV 232
P I + N +YV
Sbjct: 235 VPQIAVQNGEYV 246
>gi|322831680|ref|YP_004211707.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
gi|321166881|gb|ADW72580.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
Length = 241
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E LE++ + +D E+ L+ Y IC +SG G K GD ++PEGFY + +
Sbjct: 42 PVYIQIFKQERKLELYAQ-LDGEFRLIGSYGICDFSGGLGNKRREGDFKSPEGFYNVDIH 100
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+L P+S+++ +INIGFPN +D + +G LMIHG C S GCYAM + M EI+ V+ +
Sbjct: 101 HLKPDSRFYRAINIGFPNAYDISQGYSGKYLMIHGNCKSIGCYAMTDGYMDEIFTYVQAA 160
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
+ Q +++I +PFRMT NM+ ++N+ YSFWN L+ G+ YFEK+HQ P + + + +
Sbjct: 161 FQFG-QRNLKISIYPFRMTDANMKAHKNSSYYSFWNQLQPGYAYFEKHHQPPNVVVTDGR 219
Query: 231 Y 231
Y
Sbjct: 220 Y 220
>gi|294635173|ref|ZP_06713681.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
gi|291091435|gb|EFE23996.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
Length = 240
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 12/232 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M+ +L L + L C S S +L+ S P I+IFK E
Sbjct: 1 MSKIVTLLAICLALPLAACKSSASESGSVPRSGVNSLLGS----------PVYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
LE++ + V Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+
Sbjct: 51 RQLELYAK-VQNGYQLVKRFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIG+PN +D+AH +G LMIHG+C S GCYAM N + EIY V+ + R N Q +
Sbjct: 110 AINIGYPNPYDQAHGYSGKYLMIHGDCVSVGCYAMTNAGISEIYRYVQSAFR-NGQMLVD 168
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
I +PF MT +NMQ ++N+ +FW L+ G+ YF ++ P + + + +YV
Sbjct: 169 INIYPFHMTERNMQRHRNSSYINFWRELQPGYQYFAQHALPPQVNVQDGRYV 220
>gi|310766742|gb|ADP11692.1| hypothetical protein EJP617_20110 [Erwinia sp. Ejp617]
Length = 244
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 7/233 (3%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
I L IFL + + A PL+ +S + ++ P ++IFK E LE+
Sbjct: 3 KIALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLEL 57
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+G
Sbjct: 58 YGK-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVG 116
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +P
Sbjct: 117 FPNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIEVSIYP 175
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
FRMT NMQ ++ + +FW L+ G+ F + Q P + + +YV + T
Sbjct: 176 FRMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVLSRPLT 228
>gi|259909352|ref|YP_002649708.1| hypothetical protein EpC_27230 [Erwinia pyrifoliae Ep1/96]
gi|224964974|emb|CAX56502.1| Putative exported protein [Erwinia pyrifoliae Ep1/96]
gi|283479424|emb|CAY75340.1| Uncharacterized protein yafK precursor [Erwinia pyrifoliae DSM
12163]
Length = 243
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 7/228 (3%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
I L IFL + + A PL+ +S + ++ P ++IFK E LE+
Sbjct: 3 KIALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLEL 57
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+G
Sbjct: 58 YGK-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVG 116
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +P
Sbjct: 117 FPNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHHVEAALR-NGQPRIEVSIYP 175
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FRMT NMQ ++ + +FW L+ G+ F + Q P + + +YV
Sbjct: 176 FRMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVL 223
>gi|188534726|ref|YP_001908523.1| hypothetical protein ETA_26010 [Erwinia tasmaniensis Et1/99]
gi|188029768|emb|CAO97647.1| Putative exported protein [Erwinia tasmaniensis Et1/99]
Length = 244
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 129/226 (57%), Gaps = 8/226 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + + + PL+ +S + ++ P ++IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFAS--VTETATPLAP---VSKELRKQLIGVPVYLQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y IC +SG GPK GD ++PEGFY + + L PNS+++ +IN+GFP
Sbjct: 60 K-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYNVSLSQLKPNSRFYRAINVGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I + +PFR
Sbjct: 119 NEYDRQQGYQGNYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIDVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT NMQ ++ + +FW L+ G+ F + Q P + + +YV
Sbjct: 178 MTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAMAVNAGKYVL 223
>gi|226328780|ref|ZP_03804298.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198]
gi|225201966|gb|EEG84320.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198]
Length = 256
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 8/210 (3%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
SL+ A++ LS M+ + S P I+IFK E++LE++ +D + ++ Y IC
Sbjct: 18 SLLVNADNSLS----FLMKPVKKSTGQPIYIQIFKEESLLELYTEKLDGQLEKVRTYPIC 73
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143
++SG GPK GD ++PEGFY + + LNPNS+++ +IN+GFPN++DK+ TG LMI
Sbjct: 74 SYSGGLGPKKFQGDLKSPEGFYQVNFAQLNPNSRFYRAINLGFPNQYDKSKGYTGDFLMI 133
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSL-RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202
HG C S GCYAM + M EIY +L RG QS I I FPF+MT++NM+ +Q + +
Sbjct: 134 HGACKSVGCYAMTDPVMDEIYQYAELALQRG--QSTINIHIFPFKMTAENMKKHQYSKDM 191
Query: 203 S-FWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FW L + Y E + P I + + +Y
Sbjct: 192 DFFWQQLMPAYQYVEAYKKIPSITVQDGRY 221
>gi|284007778|emb|CBA73623.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 182
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++K Y IC +SG GPK GD ++PEGFY I + L P+SKY+ + N+GFPNE+D+AH
Sbjct: 1 MVKSYPICNFSGGLGPKTRQGDLKSPEGFYRITRSQLKPDSKYYRAFNLGFPNEYDQAHG 60
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
TG+ LM+HG C S GCYAM ++ + EIY V ++L N Q IQ+ +PF+MTS NM
Sbjct: 61 YTGSYLMVHGGCRSIGCYAMTDRYINEIYRYVENALH-NGQYEIQVNIYPFKMTSANMNR 119
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
++N+ Y+FW L+ ++YF K +Q P I I QY+ K
Sbjct: 120 HRNSRYYTFWQQLQPAYEYFTKTNQLPVINIQQGQYLVNK 159
>gi|254786219|ref|YP_003073648.1| hypothetical protein TERTU_2191 [Teredinibacter turnerae T7901]
gi|237686206|gb|ACR13470.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 171
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 2/172 (1%)
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+W ++ + EY L K Y+IC +SG+ GPK GD QAPEGFY++ +LNP S Y LS N+
Sbjct: 1 MWVKSGE-EYELFKTYEICTFSGSLGPKTRKGDNQAPEGFYFVKPGSLNPWSSYHLSFNL 59
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN +++ H TG+ LM+HG+C S G YAM ++ + EIYA+ + + Q ++ AF
Sbjct: 60 GYPNSYERLHGFTGSALMVHGKCVSIGSYAMTDRYINEIYAMAQGAFESG-QPFFRVHAF 118
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFR+ S+ ++ Y+NN YSFW LK G+D+F K+ P + +YVF G
Sbjct: 119 PFRLESEVLEKYKNNRWYSFWKNLKEGYDHFAKHKVPPNVDSEKGRYVFSAG 170
>gi|323137985|ref|ZP_08073059.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
gi|322396704|gb|EFX99231.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
Length = 496
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+RIFK E LE+W R + + L K + IC WSG GPKI+ D Q+PEGFY + LN
Sbjct: 293 VRIFKQEGQLELWLRK-NGRFNLYKTFPICKWSGRLGPKIKEADYQSPEGFYSVSARQLN 351
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P+S Y + N+G+PN FD+ + RTG +M+HG C S GC+AM ++ ++EIY V +LR
Sbjct: 352 PHSNYHRAFNVGYPNAFDRQNGRTGGLVMVHGACKSVGCFAMTDRGIEEIYGFVEAALRA 411
Query: 174 NMQSHIQIQAFPFRMTSKN---------MQLYQNNPNY----SFWNMLKLGHDYFEKNHQ 220
Q I + FPFRMT + NY SFW LK G+D FE+ +
Sbjct: 412 G-QKEIAVHIFPFRMTDAAIARETGGGWLAFVGGGGNYAQWTSFWKNLKQGYDLFERTGE 470
Query: 221 EPFIQIINKQYVFFKG 236
P Y F G
Sbjct: 471 PPVAFACGDHYEFDGG 486
>gi|171911100|ref|ZP_02926570.1| hypothetical protein VspiD_07990 [Verrucomicrobium spinosum DSM
4136]
Length = 219
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 51 PTVIRIFKNENILEIW-KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P IR+FK LE+W K + K + I A SG GPK + GD QAPEGFY +
Sbjct: 26 PIFIRVFKETLELELWIKAKSAPAFRKWKTWPIAAMSGELGPKTKEGDRQAPEGFYQVTT 85
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+LNP S Y LS NIG+PN FD+AH RTG+ +M+HG+ S GC+AM + ++EIY +
Sbjct: 86 KSLNPRSSYHLSFNIGYPNAFDQAHQRTGSFIMVHGKAVSIGCFAMTDPVIEEIYLMAEA 145
Query: 170 SLRGNMQSHIQIQAFPFRMTSKN-MQLYQNNPN-YSFWNMLKLGHDYFEKNHQEPFIQII 227
+L+ QS + FPFRMTS+ +Q + +P+ FW L+ G+ FE Q P I++
Sbjct: 146 ALKRG-QSSFGVHVFPFRMTSERLLQAGEEHPSLLKFWLDLRPGYTAFESTQQPPIIKVE 204
Query: 228 NKQY 231
K+Y
Sbjct: 205 EKRY 208
>gi|114800403|ref|YP_759185.1| hypothetical protein HNE_0455 [Hyphomonas neptunium ATCC 15444]
gi|114740577|gb|ABI78702.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 253
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L ++ +K + P ++I K L + ++ + ++ + + +CA SG GPKI
Sbjct: 54 AEPLKAALAEKGLALGSPVFLQITKEPAELTAYVQDTEGKFQPFRTWPVCAVSGDLGPKI 113
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
GD QAPEGFY + +NP S + LS N+G+PN FD+A++RTG+ LM+HG CAS GC+
Sbjct: 114 REGDHQAPEGFYKVTAGQMNPASSFHLSFNLGYPNAFDRANDRTGSFLMVHGSCASVGCF 173
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213
AM ++ ++EI+ +++ + G Q + + FPF MT + M + +P+ +FW LK +
Sbjct: 174 AMTDEGIEEIWTLMQAAFEGG-QKAVDVHIFPFPMTQQAMAGREASPHAAFWESLKPAWN 232
Query: 214 YFEKNHQEPFIQIINKQY 231
F + + P + + + Y
Sbjct: 233 KFSASGEVPTVSVRDGAY 250
>gi|187735088|ref|YP_001877200.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC
BAA-835]
gi|187425140|gb|ACD04419.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC
BAA-835]
Length = 244
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P +R K +++LE+W + +E Y+L K Y I AWSG GPK + GD Q PEGFY +
Sbjct: 59 PVFLRAVKEDSVLELWVKPDKSECYMLAKRYPIAAWSGKLGPKEKEGDRQTPEGFYEVEP 118
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
+ LNP S Y LS NIG+PN +D++ NRTG+ +M+HG S GC AM + ++EIY +V
Sbjct: 119 SGLNPRSNYHLSFNIGYPNAYDRSLNRTGSFIMVHGRDVSIGCLAMTDSGIEEIYTMVEQ 178
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+L + Q ++ +Q +PF T + +++P+ +FW + D+ E+ ++ +N
Sbjct: 179 ALV-HGQKNVPVQIYPFVPTPARLSEEKDSPHAAFWADMARAWDWTERTRTPARVKAVNG 237
Query: 230 QYVFFK 235
+ V +
Sbjct: 238 RLVVVE 243
>gi|312114448|ref|YP_004012044.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219577|gb|ADP70945.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 352
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSEN-LIISMQKKRTSPFHPTVIRIFKNENILE 64
+ + F L F SR E EN L + K P IRI+K + LE
Sbjct: 11 SAIAFCLASFQGASATSRDARGAVE---KENALAAEFEGKGMKLGSPVFIRIYKQSSTLE 67
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL-NPNSKYFLSIN 123
+W Y L K Y IC ++G GPK+ GD Q+PEG Y + W++L PN ++ ++N
Sbjct: 68 LWVEK-GPRYELFKTYGICKFAGGLGPKMYEGDRQSPEGLYRVEWDDLIGPNPRWHRAMN 126
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
I +PN FDK + R G+ ++IHG+C+S GC+A+ + ++E+Y VR +LRG QSH+ + A
Sbjct: 127 INYPNAFDKMNGRGGSSILIHGKCSSIGCFAIQDANVEEVYDAVRAALRGG-QSHVPVLA 185
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
PFR +L FW+ L+ F+++ P + + +Y F
Sbjct: 186 LPFRFAKYAPELDDTRKLNEFWSDLRRADLLFDRDRLPPMAYVCDNRYYF 235
>gi|255530608|ref|YP_003090980.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
gi|255343592|gb|ACU02918.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
Length = 244
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 10/194 (5%)
Query: 46 TSPFHPTVIRIFKNENILEIW-KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
T PF I +KNE LE+W K N Y L K Y CA SGT GPK++ GD Q PEGF
Sbjct: 54 TRPFK-LYIAAYKNEGKLELWLKTNGQKAYKLFKIYDFCAHSGTLGPKVKEGDLQTPEGF 112
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDK---AHNRTGADLMIHGECASAGCYAMNNKQMQ 161
YYI N NP S + LS+ + +PN+ D+ R G D+ IHG C + GC + + +++
Sbjct: 113 YYI--NVFNPKSSFHLSLGVNYPNKVDERRSGKERPGGDIYIHGNCVTVGCIPLTDDKIK 170
Query: 162 EIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM--QLYQNNPNYSFWNMLKLGHDYFEKNH 219
E+Y + ++ + Q I + FPF+MTS N+ QL Q + W L+ G+ YFEK++
Sbjct: 171 EVYVLAVEA-KNAGQDPIPVHIFPFKMTSVNLNIQLKQYPAQRALWTNLETGYRYFEKHN 229
Query: 220 QEPFIQIINKQYVF 233
P + +Y+F
Sbjct: 230 NLPVVTEKEGKYLF 243
>gi|300723899|ref|YP_003713210.1| hypothetical protein XNC1_3038 [Xenorhabdus nematophila ATCC 19061]
gi|297630427|emb|CBJ91092.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 121
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYA 154
TGD ++PEGFY++ L PNS Y+ +IN+GFPNEFDK+ +G +LMIHGEC S GCYA
Sbjct: 2 TGDLKSPEGFYHVSLKQLKPNSHYYRAINLGFPNEFDKSKGYSGNNLMIHGECKSIGCYA 61
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214
M N+ M EIY + + Q I+I +PFRMT +NM+ Y+NN N+ FW L+ ++Y
Sbjct: 62 MTNRYMDEIYQYAESAFY-HGQLAIKINIYPFRMTPQNMRRYKNNDNFLFWKQLQHAYEY 120
Query: 215 F 215
+
Sbjct: 121 Y 121
>gi|218678022|ref|ZP_03525919.1| hypothetical protein RetlC8_03792 [Rhizobium etli CIAT 894]
Length = 262
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QAFPF
Sbjct: 1 PNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQAFPF 59
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
RMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YVF
Sbjct: 60 RMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF 106
>gi|290476303|ref|YP_003469207.1| hypothetical protein XBJ1_3325 [Xenorhabdus bovienii SS-2004]
gi|289175640|emb|CBJ82443.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 180
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P I+IFK E +LE++ ++ Y L + Y IC +SG GPK TGD ++PEGFY++
Sbjct: 41 PGAEIFIQIFKEEKVLELYTKDNTDHYQLAQSYPICNYSGGLGPKTLTGDFKSPEGFYHV 100
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
L PNS+Y+ +IN+GFPNEFDK +G +LMIHG C S GCYAM ++ + EIY
Sbjct: 101 NLKQLKPNSRYYRAINLGFPNEFDKFRGYSGNNLMIHGGCKSIGCYAMTDRYIDEIYRYA 160
Query: 168 RDSLR-GNMQSHIQIQA 183
++ G + I IQ
Sbjct: 161 ESAISYGQDEIKINIQG 177
>gi|256424395|ref|YP_003125048.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
gi|256039303|gb|ACU62847.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
Length = 252
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 35 ENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPK 92
E L QKK + P IR FK ++ LEIW +N A+ + L K Y++C SG GPK
Sbjct: 45 EQLREEFQKKGLAYPAKYIFIRSFKLDSELEIWVKNSVADTFRLFKSYRVCTLSGKMGPK 104
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---RTGADLMIHGECAS 149
+ GD Q PEGFYYI N+ NPNS Y LS+ I +PN DK + + G ++ IHG C +
Sbjct: 105 RKEGDRQVPEGFYYI--NDFNPNSSYHLSLGINYPNFADKILSDPKKPGGEIYIHGSCLT 162
Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY------QNNPNYS 203
GC + + ++E+Y + ++ + + Q I + FP + + Y ++N +
Sbjct: 163 IGCIPLTDDIIEEVYVMAVNA-KNSGQDFIPVHVFPVKFGNIRSMEYLGNFTLKDNSSEK 221
Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINK 229
FW LK +DYFE +H+ P + + K
Sbjct: 222 FWVDLKYAYDYFEAHHKLPVVLVDEK 247
>gi|149279594|ref|ZP_01885723.1| putative inner membrane protein [Pedobacter sp. BAL39]
gi|149229630|gb|EDM35020.1| putative inner membrane protein [Pedobacter sp. BAL39]
Length = 247
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 53 VIRIFKNENILEIW-KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+I +K E +LE+W K + Y L + Y CA SG GPK++ GD Q PEGFY I N
Sbjct: 61 LIMAYKKEGMLEVWMKPKGTSRYQLFRSYGFCARSGVLGPKVQEGDYQTPEGFYEI--NA 118
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT---GADLMIHGECASAGCYAMNNKQMQEIYAIVR 168
NP S + LS+ + +PN D A + T G ++ IHG C + GC + +++++E+Y +
Sbjct: 119 FNPQSNFHLSLGVSYPNAVDLARSGTKKPGGEIYIHGNCVTVGCVPLTDEKIKEVYLLAI 178
Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN-PNY-SFWNMLKLGHDYFEKNHQEPFIQI 226
++ R Q I + FPFRM N + P + +FW +K G+ YFE P I++
Sbjct: 179 EA-RNAGQQRIPVYMFPFRMNEVNFEKNAKQFPQFRNFWASMKTGYQYFESRKTLPQIRV 237
Query: 227 INKQY 231
+ QY
Sbjct: 238 KSGQY 242
>gi|296125423|ref|YP_003632675.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM
12563]
gi|296017239|gb|ADG70476.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM
12563]
Length = 247
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Query: 53 VIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+I +K E+ILEI+ +N D Y + EYKI A SG GPK GD Q PEGFYYI +
Sbjct: 62 LITAYKQEDILEIYAKNKNDKTYKKIAEYKIAAKSGILGPKRMEGDLQVPEGFYYI--DR 119
Query: 112 LNPNSKYFLSINIGFPNEFDKAHN---RTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168
NP S Y+LS+ I +PNE D+ + R G D+ IHG + GC M + +++EIY +
Sbjct: 120 FNPASSYYLSLGINYPNEADRKKSNAKRLGGDIFIHGANVTIGCMPMTDDKIKEIY-LYA 178
Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQ---NNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225
+ N Q+ I + FPF+MT N Y+ + FW +K G+D F+ +E I+
Sbjct: 179 IYAKDNGQNKIPVYIFPFKMTDDNFNYYKEIYESSLIDFWKNIKEGYDIFQNTKKEINIK 238
Query: 226 IINK-QYVF 233
I N Y+F
Sbjct: 239 IDNNGNYIF 247
>gi|225619280|ref|YP_002720506.1| hypothetical protein BHWA1_00333 [Brachyspira hyodysenteriae WA1]
gi|225214099|gb|ACN82833.1| conserved hypothetical protein [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 10/175 (5%)
Query: 53 VIRIFKNENILEIWKRN-VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+I ++K E+ILEI+ +N D+ Y + Y I A SG GPK GD Q PEGFYYI +
Sbjct: 61 LITVYKQEDILEIYAKNKSDSTYKKIASYNIAAKSGILGPKRMEGDLQVPEGFYYI--DR 118
Query: 112 LNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168
NP S Y+LS+ I +PNE DK +R G D+ IHG + GC M + +++EIY +
Sbjct: 119 FNPASSYYLSLGINYPNESDKKKSNASRLGGDIFIHGANVTIGCMPMTDDKIKEIY-LYA 177
Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS---FWNMLKLGHDYFEKNHQ 220
+ N Q+ I + FPF+MT +N Y+ N S FW+ +K G+D F+ + +
Sbjct: 178 VYAKDNGQNKIPVYIFPFQMTDRNFDYYKKYYNESLINFWDNIKKGYDIFQNSKK 232
>gi|213026129|ref|ZP_03340576.1| hypothetical protein Salmonelentericaenterica_28298 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 147
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V
Sbjct: 2 NQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTA 61
Query: 170 SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINK 229
+L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++
Sbjct: 62 ALVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDG 120
Query: 230 QYVFFK 235
+YV K
Sbjct: 121 RYVVSK 126
>gi|196234486|ref|ZP_03133311.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428]
gi|196221467|gb|EDY16012.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+R K E +LE+W R+ + L+ Y I A SGT GPK GD Q PEGFY I N N
Sbjct: 71 LRWLKREAMLELWARDPGRRFRLVATYPILASSGTPGPKRREGDRQVPEGFYEI--NRFN 128
Query: 114 PNSKYFLSINIGFPNEFD---KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
P S + LS+ + +PN D H++ G+D+ IHG S GC + + ++E+Y D+
Sbjct: 129 PKSSFHLSLGLNYPNASDLVLSDHDQPGSDIFIHGSNVSIGCAPLGDNAIEEVYLAALDA 188
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLY-----QNNPNYS-FWNMLKLGHDYFEKNHQEPFI 224
+ Q+ IQ+ FP RM + + + P + FW L+ G ++FE++ P +
Sbjct: 189 -QARGQARIQVHVFPSRMNGSGWEQFATGEIRQRPELAVFWTQLRPGFEFFERHRTLPTV 247
Query: 225 QI 226
+
Sbjct: 248 AV 249
>gi|300870101|ref|YP_003784972.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000]
gi|300687800|gb|ADK30471.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000]
Length = 242
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 13/210 (6%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI-FKNENILEIW-KRNVDAEYVLLKEY 80
R I+ E + +NL Q S +I I +K E+ILEI+ K N D Y + +Y
Sbjct: 32 RKAIEDKEQIIKQNL----QNNNISINKLNIIIIAYKEESILEIYAKNNADKTYKKIAQY 87
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK---AHNRT 137
I + SG GPK GD Q PEGFYYI + NP S Y+LS+ I +PN+ D+ N+
Sbjct: 88 NIASKSGVLGPKRMEGDLQVPEGFYYI--DRFNPASSYYLSLGINYPNKSDQIKGKRNQL 145
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ-LY 196
G D+ IHG + GC M + +++EIY + + N Q I + FPF+MT +N++
Sbjct: 146 GGDIFIHGSEVTIGCIPMTDDKIKEIYLYAVHA-KNNGQKKIPVYIFPFKMTEENIKNRR 204
Query: 197 QNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226
+++ +FW +K+G+D F + +E +I
Sbjct: 205 ESDKLINFWKNIKVGYDVFINSKREIIYKI 234
>gi|124003370|ref|ZP_01688220.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina
ATCC 23134]
gi|123991468|gb|EAY30899.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina
ATCC 23134]
Length = 296
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 54 IRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
IR K E +E+W R + + L++ YK C SG GPK + GD+Q PEGFY+I N
Sbjct: 107 IRAVKLEREVEVWARQKGTKPFKLVRTYKFCESSGELGPKRKDGDKQIPEGFYHI--NRF 164
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT---GADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
NP SK+ LS+ + +PN DK T G D+ +HG+C + GC + + ++E+Y +
Sbjct: 165 NPVSKFHLSLGLNYPNRSDKVLGDTTGLGGDIFLHGDCVTVGCIPITDNNIRELYVFAVE 224
Query: 170 SLRGNMQSHIQIQAFPFRMT----SKNMQLYQNNPN-YSFWNMLKLGHDYFEKNHQEPFI 224
+ + Q I + FP R+ K + Y+ N FW LK G++YFE + P I
Sbjct: 225 A-KARGQKKIPVNIFPARLDNAGFDKLKEQYKAQENLVEFWASLKKGYEYFENTKELPTI 283
>gi|213421922|ref|ZP_03354988.1| hypothetical protein Salmonentericaenterica_31013 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 119
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
+Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFPN +D+
Sbjct: 12 QYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFPNAYDR 71
Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
AH G LMIHG C S GCYAM + + EI+ V +L
Sbjct: 72 AHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAAL 110
>gi|332664143|ref|YP_004446931.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM
1100]
gi|332332957|gb|AEE50058.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
+ A + E L + +K P IR FK+E LE+W ++ ++ K Y IC
Sbjct: 37 VANARQLVGEKLAQELTQKGLKPGAAIFIRAFKSEQQLEVWVQD-SLQFRWFKTYHICKV 95
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---RTGADLM 142
G GPK + GD Q PEG Y+I NP S Y LS+ I +PN D+ + + G ++
Sbjct: 96 PGELGPKRKEGDLQVPEGLYWI--EVFNPQSSYHLSMGINYPNASDRILSDPKKPGGEIY 153
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ--LYQNNP 200
IHG C S GC + ++ ++E+Y + D+ + Q I + FP RMT +N L +N P
Sbjct: 154 IHGACGSVGCIPLTDEFIREVYLLALDA-KTAGQEKIPVHIFPCRMTEQNKVNLLARNQP 212
Query: 201 NY-SFWNMLKLGHDYFEKNHQEP 222
+ FW L +D+F + P
Sbjct: 213 HLMPFWENLAEAYDFFVEKKVVP 235
>gi|86358120|ref|YP_470012.1| hypothetical protein RHE_CH02508 [Rhizobium etli CFN 42]
gi|86282222|gb|ABC91285.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 189
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201
M+HG C+S+GC+A+ ++ + EIYA+V +LRG Q+ Q+QA+PFRMT +N+ ++++PN
Sbjct: 1 MVHGACSSSGCFALTDQGVGEIYAVVEKALRGGQQA-FQVQAYPFRMTPQNLAAHRDDPN 59
Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
++FW LK G+D FE +EP + +++Y+F
Sbjct: 60 FAFWKNLKEGYDIFEVRRREPRVAACSRKYIF 91
>gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath]
gi|53758776|gb|AAU93067.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 292
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P V+ K E LE+W R+ ++Y L++ Y I A SG+ GPK+ GD+Q PEG Y I
Sbjct: 105 PPREVVLVGLKQEKKLELWARD-GSDYRLIRHYDIQAASGSAGPKLRQGDKQVPEGVYRI 163
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAH------NRTGADLMIHGECASAGCYAMNNKQMQ 161
LNPNS Y LS+ + +PN+FD H + G+D+ IHG SAGC AM ++ ++
Sbjct: 164 --VGLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAGCLAMGDEAIE 221
Query: 162 EIYAIV 167
E++ +
Sbjct: 222 ELFVLT 227
>gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9]
gi|46915612|emb|CAG22384.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9]
Length = 246
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
P+ E I M ++ + P I +F K E +E+W ++ +A +V +K Y I SG
Sbjct: 58 PILEPRISLMFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKS 116
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD------KAHNRTGADLMI 143
GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD + NR GA++ I
Sbjct: 117 GPKLREGDHQVPEGIYQV--IGLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFI 174
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
HG+ S GC AM + ++E++ +V + N+Q I
Sbjct: 175 HGKAKSVGCLAMGDIAIEELFLLVERAQIQNVQVVI 210
>gi|90411123|ref|ZP_01219136.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK]
gi|90327969|gb|EAS44290.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK]
Length = 238
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
P+ E I M ++ + P + +F K E +E+W ++ +A +V +K Y I SG
Sbjct: 50 PILEPRISLMFEQVGVQYPPEQVALFALKEEMQVELWAKDGEA-WVYIKRYDIAKISGKS 108
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD------KAHNRTGADLMI 143
GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD + NR GA++ I
Sbjct: 109 GPKLREGDHQVPEGIYQV--IGLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGANIFI 166
Query: 144 HGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
HG+ S GC AM + ++E++ +V + N+Q I
Sbjct: 167 HGKAKSVGCLAMGDIAIEELFLLVERAKIQNVQVVI 202
>gi|153874627|ref|ZP_02002774.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152068908|gb|EDN67225.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 172
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 48 PFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P+ P + + FK E LE+W + ++ Y I A SG GPK+ GD Q PEG Y
Sbjct: 2 PYPPQRLALLGFKAEKRLEVWAEQ-QTTWQFIRNYPILAASGVAGPKLREGDRQVPEGIY 60
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKA----HNRT--GADLMIHGECASAGCYAMNNKQ 159
I N LNPNS+Y LS+ I +PNEFD+ NRT G ++ IHG+ S GC A+ ++
Sbjct: 61 RI--NFLNPNSRYHLSMQINYPNEFDRRKAALENRTDLGGEIFIHGKAVSIGCLAIGDEA 118
Query: 160 MQEIYAIV 167
++E++ +V
Sbjct: 119 IEELFVLV 126
>gi|256823749|ref|YP_003147712.1| hypothetical protein Kkor_2536 [Kangiella koreensis DSM 16069]
gi|256797288|gb|ACV27944.1| conserved hypothetical protein [Kangiella koreensis DSM 16069]
Length = 243
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
K E LE+W + A V +++Y + A SG GPK+ GD Q PEG Y I + LNPNS
Sbjct: 77 IKEEATLELWDTSA-ANPVFIRKYSVLAQSGVAGPKLREGDMQVPEGIYRIEY--LNPNS 133
Query: 117 KYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
Y LS+ + +PN+FD H R G ++ IHG+ S GC AM ++ +E++ + D
Sbjct: 134 SYHLSMKLNYPNDFDLTHARAEGRSEPGTNIFIHGKAVSIGCLAMGDEVAEELFVLASD 192
>gi|83646750|ref|YP_435185.1| hypothetical protein HCH_04045 [Hahella chejuensis KCTC 2396]
gi|83634793|gb|ABC30760.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 248
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
T P + FK E LE+W D VL+ Y I A SG GPK+ GD Q PEGFY
Sbjct: 69 TYPPQRITLLAFKEEKRLELWAEQ-DGVQVLVSAYPIQAASGVAGPKLREGDRQVPEGFY 127
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFD----KAHNRT--GADLMIHGECASAGCYAMNNKQ 159
I NPNS + LS+ + +P+ FD +A RT G D+ IHG+ +S GC AM +
Sbjct: 128 RI--EGFNPNSSFHLSMKLNYPSPFDLKHAQAEGRTSPGGDIFIHGKASSVGCLAMGDPA 185
Query: 160 MQEIYAIV 167
+++++ +
Sbjct: 186 VEDLFILA 193
>gi|85859827|ref|YP_462029.1| hypothetical protein SYN_00443 [Syntrophus aciditrophicus SB]
gi|85722918|gb|ABC77861.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
Length = 313
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
+ K E LE+W R D +V ++ Y I A SG+ GPK + GD Q PEG Y I +LNP
Sbjct: 87 VLKEEKKLEVWTR-YDGNWVHVRTYDILAASGSRGPKRKKGDYQVPEGIYQI--VSLNPA 143
Query: 116 SKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169
S++ LS+ I +PN +D R G D+ IHG+ S GC AM NK ++E++ +V
Sbjct: 144 SRFHLSMKINYPNAYDLQMARNEQRSNLGGDIFIHGKTRSHGCLAMGNKAIEELFVLVAK 203
Query: 170 SLRGNMQSHI 179
+ N++ I
Sbjct: 204 TRPRNVKVVI 213
>gi|330447689|ref|ZP_08311337.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491880|dbj|GAA05834.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 233
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF-HPTVIRIF---------- 57
L L + +++ A +P + + + KR SPF P + R F
Sbjct: 6 LLPLLVMFTAVTDAQAASSYATYPPAGSRTVDDVMKRYSPFVEPRIKRYFESVGLTYPPK 65
Query: 58 -------KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
K E LE+W ++ +K Y I SG GPK+ GD+Q PEG Y +
Sbjct: 66 NIALFAMKEEMSLELWAEE-KGKWSYVKRYDIEKISGKKGPKLREGDKQVPEGIYRVSL- 123
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIY 164
LNPNS++ LS+ + +PN FD+ + R G+++ IHG+ AS GC AM + ++E++
Sbjct: 124 -LNPNSRFHLSMKLDYPNAFDRKYARLEGRTSPGSNIFIHGKQASTGCLAMGDYSIEELF 182
Query: 165 AIVRDSLRGNMQSHI 179
+ + N++ I
Sbjct: 183 LLAERTGLDNIEVVI 197
>gi|269104655|ref|ZP_06157351.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161295|gb|EEZ39792.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 239
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 22 SRSLID--KAEHPLSE-NLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVL 76
SR++ D K P+ E L I + S + P I +F KNE +E+W D + L
Sbjct: 35 SRTVDDVIKRYQPIVEPRLKIDFARAEVS-YPPKKIALFAMKNEQKMELWAEEGDT-WHL 92
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD----K 132
+K Y I SG GPK GD+Q PEG Y + + LNPNS+Y LS+ + +PN+FD K
Sbjct: 93 IKNYPITKLSGVMGPKKREGDKQIPEGIYQVEF--LNPNSQYHLSMKLNYPNDFDLKYAK 150
Query: 133 AHNRT--GADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
RT G ++ IHG+ +S GC A+ + ++E++ + +++
Sbjct: 151 LEGRTKPGTNIFIHGKESSVGCLAIGDVAIEELFVLAKNT 190
>gi|294054888|ref|YP_003548546.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614221|gb|ADE54376.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis
DSM 45221]
Length = 235
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK E +E+W + +++ +SG GPK+ GD Q PEG Y I + LNPNS
Sbjct: 67 FKEERKIEVWVSGQSGTKEI-RQFDFTGYSGELGPKLRQGDGQIPEGIYEIEY--LNPNS 123
Query: 117 KYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
Y LS+ I +PNEFD+ R G D+ IHG+ A+ GC + + ++E++ +V S
Sbjct: 124 SYHLSMKISYPNEFDRLKGREDRREKLGYDIFIHGKSATVGCIPIGDDGIEELFLMV--S 181
Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGH-DYFEKNHQEP 222
G + + I + R + +++ + + +++++ Y K+ EP
Sbjct: 182 EFGKDRVQVIISPYDMRQGRRALEITEISWENELYDIIEAASMKYAPKDSTEP 234
>gi|90578351|ref|ZP_01234162.1| hypothetical protein VAS14_14909 [Vibrio angustum S14]
gi|90441437|gb|EAS66617.1| hypothetical protein VAS14_14909 [Vibrio angustum S14]
Length = 233
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 27/195 (13%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF-HPTVIRIF---------- 57
L L + ++ + +P + + KR SPF P + R F
Sbjct: 6 LLPLLVMFTAVTDVQAAYSYSTYPPAGTRTVDDVMKRYSPFVEPRIKRYFEQAGLSYPPK 65
Query: 58 -------KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
K E ++E+W ++ +K Y I SG GPK+ GD+Q PEG Y +
Sbjct: 66 NIALFAMKEEMLVELWAEE-KGKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIYRVSL- 123
Query: 111 NLNPNSKYFLSINIGFPNEFD----KAHNRT--GADLMIHGECASAGCYAMNNKQMQEIY 164
LNPNS++ LS+ + +PN FD K RT G+++ IHG+ AS GC AM + ++E++
Sbjct: 124 -LNPNSRFHLSMKLDYPNAFDRKYAKLEGRTSPGSNIFIHGKQASTGCLAMGDYSIEELF 182
Query: 165 AIVRDSLRGNMQSHI 179
+ + + N++ I
Sbjct: 183 LLAQRTGLDNIEVVI 197
>gi|167947682|ref|ZP_02534756.1| hypothetical protein Epers_14537 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 249
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 35/214 (16%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK--KRTSP------------F 49
R+ ++L F + G +L A PLS ++ +++ R P +
Sbjct: 2 RFAVILLC-FTLIAG-----TLPVAANEPLSPEVVQVLERLVPRLEPQLRRRFEQAGVEY 55
Query: 50 HPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P +++ K E +E+W + + + +Y++ A SG GPK+ GD Q PEGFY I
Sbjct: 56 PPARLQLISLKQEQQIEVWAADA-GPWRHIHDYQVLAASGVAGPKLREGDRQVPEGFYQI 114
Query: 108 GWNNLNPNSKYFLSINIGFPNEFD------KAHNRTGADLMIHGECASAGCYAMNNKQMQ 161
LNP+S++ LSI + FPN FD + + G+++ IHG S GC A+ ++ ++
Sbjct: 115 --EALNPHSRFHLSIKLNFPNSFDWLNAHAEGRRQPGSNIFIHGSAWSVGCLAIGDQAVE 172
Query: 162 EIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
E++ +V S Q + P+ + QL
Sbjct: 173 ELFLLVARS----WQEPASVMILPYDFRCQAPQL 202
>gi|308050605|ref|YP_003914171.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
gi|307632795|gb|ADN77097.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
Length = 248
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 49 FHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
F P +++ K + +E+W + D ++ L+ Y I SG+ PK+ GD PEG Y
Sbjct: 53 FKPVAMKLVAIKADRRMEVWLQGADGQWGELRSYPILEASGSLRPKMRQGDFLVPEGVYR 112
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQM 160
I NPNS Y LS+ I +PN D+ + G D+ IHG S GC AM ++ +
Sbjct: 113 I--EAANPNSLYHLSLKIDYPNAMDQHYGAMEQRGDLGGDIFIHGRDVSQGCLAMGDRYI 170
Query: 161 QEIYAIVRD 169
+E++ + D
Sbjct: 171 EELFVLAHD 179
>gi|89074657|ref|ZP_01161122.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34]
gi|89049595|gb|EAR55155.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34]
Length = 233
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 49 FHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
+ P I +F K E +E+W ++ +K Y I SG GPK+ GD+Q PEG Y
Sbjct: 62 YPPQNIALFAMKEEMSVELWAEE-KGKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIYR 120
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFD----KAHNRT--GADLMIHGECASAGCYAMNNKQM 160
I LNPNS++ LS+ + +PN FD K RT G+++ IHG+ AS GC AM + +
Sbjct: 121 ISL--LNPNSRFHLSMKLDYPNAFDRKYAKLEGRTFPGSNIFIHGKQASTGCLAMGDYSI 178
Query: 161 QEIYAIVRDSLRGNMQSHI 179
+E++ + + + N++ I
Sbjct: 179 EELFLLAQRTGLDNIEVVI 197
>gi|52841744|ref|YP_095543.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|30577829|emb|CAD90960.1| LssA protein [Legionella pneumophila]
gi|52628855|gb|AAU27596.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 243
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 35 ENLIISMQKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
E +IS K + P I + FK+E +E+W +N + E+ + +Y + +SG GPK
Sbjct: 51 EPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPNQEWTHIHDYPLTGFSGRLGPK 110
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGE 146
+ D+Q PEG Y + N NP S LS+ I +PN FD+ G ++ IHG+
Sbjct: 111 LRENDKQIPEGIYKL--VNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGK 168
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
S GC A+ + + +++ + R N+Q I
Sbjct: 169 NLSVGCLAVGDLAIDQLFILARRVGLKNIQVII 201
>gi|148359048|ref|YP_001250255.1| lipoprotein [Legionella pneumophila str. Corby]
gi|296107097|ref|YP_003618797.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy]
gi|148280821|gb|ABQ54909.1| lipoprotein [Legionella pneumophila str. Corby]
gi|295648998|gb|ADG24845.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy]
Length = 233
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 35 ENLIISMQKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
E +IS K + P I + FK+E +E+W +N E+ + +Y + +SG GPK
Sbjct: 41 EPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPK 100
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGE 146
+ D+Q PEG Y + N NP S LS+ I +PN FD+ G ++ IHG+
Sbjct: 101 LRENDKQIPEGIYKL--VNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGK 158
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
S GC A+ + + +++ + R N+Q I
Sbjct: 159 NLSVGCLAVGDLAIDQLFILARRVGLKNIQVII 191
>gi|54297427|ref|YP_123796.1| secretion system protein A [Legionella pneumophila str. Paris]
gi|53751212|emb|CAH12623.1| Legionella secretion system protein A [Legionella pneumophila str.
Paris]
Length = 243
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 35 ENLIISMQKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
E +IS K + P I + FK+E +E+W +N E+ + +Y + +SG GPK
Sbjct: 51 EPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPK 110
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGE 146
+ D+Q PEG Y + N NP S LS+ I +PN FD+ G ++ IHG+
Sbjct: 111 LRENDKQIPEGIYKL--VNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGK 168
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
S GC A+ + + +++ + R N+Q I
Sbjct: 169 NLSVGCLAVGDLAIDQLFILARRVGLKNIQVII 201
>gi|54294442|ref|YP_126857.1| secretion system protein A [Legionella pneumophila str. Lens]
gi|30577820|emb|CAD90952.1| LssA protein [Legionella pneumophila str. Corby]
gi|53754274|emb|CAH15751.1| Legionella secretion system protein A [Legionella pneumophila str.
Lens]
Length = 243
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 35 ENLIISMQKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
E +IS K + P I + FK+E +E+W +N E+ + +Y + +SG GPK
Sbjct: 51 EPQLISYFSKAGVSYPPKEIALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPK 110
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGE 146
+ D+Q PEG Y + N NP S LS+ I +PN FD+ G ++ IHG+
Sbjct: 111 LRENDKQIPEGIYKL--VNFNPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGK 168
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
S GC A+ + + +++ + R N+Q I
Sbjct: 169 NLSVGCLAVGDLAIDQLFILARRVGLKNIQVII 201
>gi|289165107|ref|YP_003455245.1| Legionella secretion system protein A [Legionella longbeachae
NSW150]
gi|288858280|emb|CBJ12148.1| Legionella secretion system protein A [Legionella longbeachae
NSW150]
Length = 243
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P + FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y +
Sbjct: 66 PPRELALLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKL 125
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGECASAGCYAMNNKQMQ 161
N NP S LS+ I +PN FD+ + G ++ IHG+ S GC A+ + +
Sbjct: 126 V--NFNPFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAID 183
Query: 162 EIYAIVR 168
+++ + R
Sbjct: 184 QLFILAR 190
>gi|270160116|ref|ZP_06188772.1| Legionella secretion system protein A [Legionella longbeachae
D-4968]
gi|269988455|gb|EEZ94710.1| Legionella secretion system protein A [Legionella longbeachae
D-4968]
Length = 264
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P + FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y +
Sbjct: 87 PPRELALLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKL 146
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGECASAGCYAMNNKQMQ 161
N NP S LS+ I +PN FD+ + G ++ IHG+ S GC A+ + +
Sbjct: 147 V--NFNPFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAID 204
Query: 162 EIYAIVR 168
+++ + R
Sbjct: 205 QLFILAR 211
>gi|29654462|ref|NP_820154.1| putative lipoprotein [Coxiella burnetii RSA 493]
gi|153211349|ref|ZP_01947691.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154707148|ref|YP_001424614.1| hypothetical protein CBUD_1254 [Coxiella burnetii Dugway 5J108-111]
gi|161830363|ref|YP_001597027.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|212218590|ref|YP_002305377.1| hypothetical protein CbuK_1024 [Coxiella burnetii CbuK_Q154]
gi|29541729|gb|AAO90668.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|120575062|gb|EAX31686.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154356434|gb|ABS77896.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
gi|161762230|gb|ABX77872.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|212012852|gb|ACJ20232.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 233
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 5 YNILLFALFIFLNGCHHS-----RSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFK 58
+ ILL F HH S I K +NL ++ S P + +FK
Sbjct: 15 FTILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPYFKRAGVSYPPKDISLLVFK 74
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
N + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++
Sbjct: 75 NSHRVQLWAKD-RGPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKI--VGFNPASRF 131
Query: 119 FLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
LS+ + +PN D+ + R G D+ IHG AS GC + NK +++++ +
Sbjct: 132 DLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA 186
>gi|212212447|ref|YP_002303383.1| hypothetical protein CbuG_0852 [Coxiella burnetii CbuG_Q212]
gi|212010857|gb|ACJ18238.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 233
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 5 YNILLFALFIFLNGCHHS-----RSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFK 58
+ ILL F HH S I K +NL ++ S P + +FK
Sbjct: 15 FTILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPCFKRAGVSYPPKDISLLVFK 74
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
N + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++
Sbjct: 75 NSHRVQLWAKD-RGPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKI--VGFNPASRF 131
Query: 119 FLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
LS+ + +PN D+ + R G ++ IHG AS GC + NK +++++ +
Sbjct: 132 DLSLMLNYPNSADRYYARLDHRHDLGDNIFIHGSDASIGCIPIGNKAIEQLFVLA 186
>gi|254496466|ref|ZP_05109343.1| secretion system protein A [Legionella drancourtii LLAP12]
gi|254354322|gb|EET12980.1| secretion system protein A [Legionella drancourtii LLAP12]
Length = 243
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK+E +E+W +N D + + Y + +SG GPK+ D+Q PEG Y + N NP S
Sbjct: 75 FKSERKVELWAKNQDQGWKHVHNYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NFNPFS 132
Query: 117 KYFLSINIGFPNEFDK------AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
LS+ I +PN +D+ G ++ IHG+ S GC A+ + + +++ + R
Sbjct: 133 SMHLSMMINYPNNYDRQKGYQDGRRNLGNNIFIHGKNLSVGCLAIGDLAIDQLFILAR-- 190
Query: 171 LRGNMQSHIQIQAFPFRMTSK 191
R ++ HIQ+ P + +K
Sbjct: 191 -RVGLE-HIQVIIAPNDLRNK 209
>gi|126738470|ref|ZP_01754175.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
gi|126720269|gb|EBA16975.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
Length = 174
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 24/139 (17%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V + N+ +I+ N ++ +L+EYK+ G K GD + PEG Y I +
Sbjct: 34 PEVTSVVVNKGARKIYLLNGES---ILREYKMDLGFAPLGHKQIEGDGKTPEGLYRI--D 88
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAG 151
NPNS Y LSI I +PN D A+ R+ G ++ IHGE +AG
Sbjct: 89 RRNPNSSYHLSIGISYPNASDVAYARSIGKRPGGEIFIHGEPNERKARKRASRVSDWTAG 148
Query: 152 CYAMNNKQMQEIYAIVRDS 170
C A+ N +++EIYA+VRD
Sbjct: 149 CIAVKNSEIEEIYAMVRDG 167
>gi|86136792|ref|ZP_01055370.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
gi|85826116|gb|EAQ46313.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
Length = 174
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+EYK+ G K GD + PEG Y I + NPNS + LSI I +PN D+AH
Sbjct: 56 ILREYKMDLGFAPLGHKRVEGDGKTPEGLYRI--DRRNPNSAFHLSIGISYPNAEDRAHA 113
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
R G ++ IHGE +AGC A+ N +++EIYA+VRD
Sbjct: 114 RALGKRPGGEIFIHGEPNNEKDRKRAARVSDWTAGCIAVKNDEIEEIYAMVRDG 167
>gi|85706916|ref|ZP_01038006.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
gi|85668527|gb|EAQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
Length = 166
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V R+ N+ E++ + + LLK YK+ G K GD + PEG Y I +
Sbjct: 31 PEVTRVIVNKGEREMYLLHHNK---LLKRYKVDLGFAPAGHKQFEGDGRTPEGEYVI--D 85
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA---------SAGCYAMN 156
NPNS + LS+ I +PNE D A+ G D+ IHGE +AGC ++
Sbjct: 86 RRNPNSSFHLSLGISYPNEADIAYAEAMGETPGGDIFIHGEPNALAVLSRDWTAGCISVK 145
Query: 157 NKQMQEIYAIVRDS 170
N++M+++YA+VRD
Sbjct: 146 NREMEDVYAMVRDG 159
>gi|254436867|ref|ZP_05050361.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307]
gi|198252313|gb|EDY76627.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307]
Length = 163
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L++Y+ G K GD + PEG YYI + NPNS+++LSI I +PN+ D+A
Sbjct: 51 VLEQYEFELGFAPTGHKKTEGDGRTPEGAYYI--DRKNPNSRFYLSIGISYPNDADRARA 108
Query: 136 RT-----GADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
R G D+ IHG +AGC A+ +++M++IYA+V
Sbjct: 109 RAMGKSPGGDIFIHGTPRLSLNRDDWTAGCLAVTDREMEDIYAMV 153
>gi|15598951|ref|NP_252445.1| hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1]
gi|107103271|ref|ZP_01367189.1| hypothetical protein PaerPA_01004340 [Pseudomonas aeruginosa PACS2]
gi|116051754|ref|YP_789407.1| hypothetical protein PA14_15840 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889966|ref|YP_002438830.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58]
gi|254236665|ref|ZP_04929988.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719]
gi|254242447|ref|ZP_04935769.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192]
gi|296387735|ref|ZP_06877210.1| hypothetical protein PaerPAb_06264 [Pseudomonas aeruginosa PAb1]
gi|313109166|ref|ZP_07795136.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa
39016]
gi|9949925|gb|AAG07143.1|AE004794_8 hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1]
gi|115586975|gb|ABJ12990.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168596|gb|EAZ54107.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719]
gi|126195825|gb|EAZ59888.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192]
gi|218770189|emb|CAW25951.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58]
gi|310881638|gb|EFQ40232.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa
39016]
Length = 166
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK Y++ GPK+ GD + PEGFY+I W + N Y LS++I +PN D A
Sbjct: 48 VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSMHISYPNARDVAKA 105
Query: 136 R-----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
R G +MIHG + GC AMNN M+E++++V+D
Sbjct: 106 REKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREVWSVVKDG 159
>gi|152986155|ref|YP_001346746.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7]
gi|150961313|gb|ABR83338.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7]
Length = 166
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK Y++ GPK+ GD + PEGFY+I W + N Y LS++I +PN D A
Sbjct: 48 VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSMHISYPNARDVAKA 105
Query: 136 R-----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
R G +MIHG + GC AMNN M+E++++V+D
Sbjct: 106 REKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREVWSVVKDG 159
>gi|126730073|ref|ZP_01745885.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37]
gi|126709453|gb|EBA08507.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37]
Length = 165
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 17/110 (15%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK Y + G K GD + PEG Y+I + NPNSK++LSI I +PN D+
Sbjct: 51 VLKSYNVGLGFAPQGHKFIEGDGKTPEGNYFI--DRRNPNSKFYLSIGISYPNPVDRMTA 108
Query: 136 R-----TGADLMIHGECA----------SAGCYAMNNKQMQEIYAIVRDS 170
+ G D+ IHG+ +AGC A+ +KQM++IYA+V+D
Sbjct: 109 QELGKSPGGDIFIHGQGPNYRKGSPRDWTAGCIAVTDKQMRDIYAMVQDG 158
>gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK Y++ GPK+ GD + PEGFY+I W + N Y LS++I +PN D A
Sbjct: 48 VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSMHISYPNARDVAKA 105
Query: 136 R-----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
R G +MIHG + GC AMNN M+E++++V+D
Sbjct: 106 REKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREVWSVVKDG 159
>gi|119386750|ref|YP_917805.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
gi|119377345|gb|ABL72109.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
Length = 169
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V ++ N+ ++ N + +LK Y+I + G K GD + PEG YYI +
Sbjct: 31 PPVTQVVVNKGARQMLLLNGN---TVLKAYRIGLGNEPLGHKQFEGDGKTPEGLYYI--D 85
Query: 111 NLNPNSKYFLSINIGFPNEFDKA-----HNRTGADLMIHGECA------------SAGCY 153
NP+S+Y LSI I +PN D G+D+ IHG+ +AGC
Sbjct: 86 RRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCI 145
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + ++++IYA+VRD
Sbjct: 146 AVTDAEVEDIYAMVRDG 162
>gi|301167780|emb|CBW27364.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 33/141 (23%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+ ++E+ +D + +++ Y + GPK++ GD + PEG Y I W N
Sbjct: 27 VEVRKSNRVMEL----IDHKGEVIRTYDVMLGQSPIGPKVQRGDNKTPEGKYKINWR--N 80
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG-------------ECASA----- 150
P S YFLS++I +PN+ D+ ++R G ++ IHG A +
Sbjct: 81 PKSSYFLSLHISYPNKEDRQNSRDLGVDPGDNIFIHGLPNKIQRLSSFERRIAESILLST 140
Query: 151 ----GCYAMNNKQMQEIYAIV 167
GC A++NK MQEI+ +V
Sbjct: 141 DWTNGCIAVSNKDMQEIWDLV 161
>gi|302185720|ref|ZP_07262393.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae 642]
Length = 187
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P ++ K+
Sbjct: 2 RWLLALFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVLV--LKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNLS 112
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYAMNNKQMQE 162
++I +PN D A R+ G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRD 169
I+ +V+D
Sbjct: 173 IWDLVKD 179
>gi|294675749|ref|YP_003576364.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
gi|294474569|gb|ADE83957.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
Length = 167
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 16/106 (15%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
++++YKI G K GD + PEG Y+I +N PNS Y LS+ + +PNE D
Sbjct: 54 VVRKYKIALGGNPVGKKRFEGDGKTPEGLYHISMHN--PNSAYHLSLRVSYPNEADTAYA 111
Query: 132 KAHNRT-GADLMIHGECA---------SAGCYAMNNKQMQEIYAIV 167
+AH R G D+MIHG+ +AGC A+ + +++EI+A+V
Sbjct: 112 EAHGRKPGGDIMIHGQGRKYRGTRGDWTAGCIAVKDDEIEEIFAMV 157
>gi|149204353|ref|ZP_01881320.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035]
gi|149142238|gb|EDM30285.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V R+ N+ E++ + + L+ YK+ G K GD + PEG Y+I +
Sbjct: 32 PDVTRVIVNKGEREMFLLHHNR---TLERYKVDLGFSPSGHKQFEGDGRTPEGEYHI--D 86
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA---------SAGCYAMN 156
NPNS + LS+ I +PNE D A+ + G D+ IHGE +AGC ++
Sbjct: 87 RRNPNSAFHLSLGISYPNEADIAYAKALGKSPGGDIFIHGEPNALAFLSPDWTAGCISVK 146
Query: 157 NKQMQEIYAIVRDS 170
N++M+++YA+VRD
Sbjct: 147 NREMEDVYAMVRDG 160
>gi|83942056|ref|ZP_00954518.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
gi|83953105|ref|ZP_00961827.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83842073|gb|EAP81241.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83847876|gb|EAP85751.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
Length = 165
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+ Y I G K+ GD + PEG Y I + NPNS++ LSI I +PNE D+A
Sbjct: 52 VLESYDIKLGFAPVGHKVYEGDGRTPEGIYMI--DRRNPNSRFHLSIGINYPNEMDRARA 109
Query: 136 RT-----GADLMIHGECASA---------GCYAMNNKQMQEIYAIVRD 169
G D+ IHG+ + GC +++N +M+EIYA+V D
Sbjct: 110 EALGKSPGGDIFIHGQKTAKDKNRTDWTWGCISVSNDEMEEIYAMVGD 157
>gi|163745086|ref|ZP_02152446.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
gi|161381904|gb|EDQ06313.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
Length = 160
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 16/109 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L++Y I G K GD + PEG Y I + NPNS++ LSI I +PN+ D +
Sbjct: 47 VLEDYPIKLGFAPVGHKTVEGDGRTPEGLYRI--DRRNPNSRFHLSIGIDYPNQLDVEYA 104
Query: 136 RT-----GADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
R+ G D+ IHG+ + GC A+ NK+++++YA+VRD
Sbjct: 105 RSMGKSPGGDIFIHGQKDPRQKEKNDWTWGCIAVTNKEIEDVYAMVRDG 153
>gi|99082736|ref|YP_614890.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
gi|99039016|gb|ABF65628.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
Length = 162
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 24/136 (17%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V I N+ +++ N E +L EYK+ G K GD + PEG Y I +
Sbjct: 22 PPVTSIVVNKGSRKMYLLN---ESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGTYLI--D 76
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAG 151
NP S+++LS+ I +PN D+AH R+ G D+ IHGE +AG
Sbjct: 77 RRNPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARVRDWTAG 136
Query: 152 CYAMNNKQMQEIYAIV 167
C A+ N +++EI+++V
Sbjct: 137 CIAVTNDEIEEIWSMV 152
>gi|89052763|ref|YP_508214.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1]
gi|88862312|gb|ABD53189.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1]
Length = 160
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T + ++K E ++ + N +L+ Y+I G K+E GD + PEG Y I +
Sbjct: 29 TRVLVYKGERMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEYMI--DR 81
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------SAGCYAMNNK 158
NPNS+++LSI I +PNE D A R G D+ IHG + GC A+ N
Sbjct: 82 RNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNA 141
Query: 159 QMQEIYAIVRDS 170
+M++IYA+V +
Sbjct: 142 EMRQIYAMVENG 153
>gi|118579010|ref|YP_900260.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
gi|118501720|gb|ABK98202.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
Length = 334
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I I K + L ++ RN LK Y+I GPK GD + PEG Y I ++
Sbjct: 197 TRILIEKGDRRLTLFSRNE-----ALKSYRIALGGAPSGPKEREGDNKTPEGAYVI--DS 249
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG----------ECASA----GC 152
N NS+Y LS++I +PNE DK + G D+MIHG A A GC
Sbjct: 250 KNGNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTRGC 309
Query: 153 YAMNNKQMQEIYAIV 167
A+++++++EIY +V
Sbjct: 310 VAVSDEEIEEIYKLV 324
>gi|254476164|ref|ZP_05089550.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11]
gi|214030407|gb|EEB71242.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11]
Length = 175
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V I N+ +++ + + +L+EYK+ G K GD + PEG Y+I +
Sbjct: 35 PEVTSIVVNKGARKVYLMH---DQDILREYKMDLGFAPAGHKAVEGDGKTPEGTYFI--D 89
Query: 111 NLNPNSKYFLSINIGFPNEFDKAH-----NRTGADLMIHGECAS--------------AG 151
NPNS Y LSI I +PN D+A + G ++ IHGE S AG
Sbjct: 90 RRNPNSAYHLSIGISYPNAEDRAKAAAMGKKPGGEIFIHGEPNSAKARKRAARVDDWTAG 149
Query: 152 CYAMNNKQMQEIYAIVRDS 170
C A+ N +++EIYA+V D
Sbjct: 150 CIAVKNHEIEEIYAMVADG 168
>gi|289677908|ref|ZP_06498798.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae FF5]
gi|330969039|gb|EGH69105.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 187
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P ++ K+
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVLV--LKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNLS 112
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYAMNNKQMQE 162
++I +PN D A R+ G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRD 169
I+ +V+D
Sbjct: 173 IWDLVKD 179
>gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
gi|63255226|gb|AAY36322.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
Length = 187
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P ++ K+
Sbjct: 2 RWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVLV--LKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNLS 112
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYAMNNKQMQE 162
++I +PN D A R+ G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRD 169
I+ +V+D
Sbjct: 173 IWDLVKD 179
>gi|254509663|ref|ZP_05121730.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
KLH11]
gi|221533374|gb|EEE36362.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
KLH11]
Length = 172
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+EY++ G K GD + PEG Y I + NP S+Y LS+ I +PN D+A
Sbjct: 54 ILREYEVDLGFAPKGTKTRKGDGRTPEGTYLI--DRRNPRSRYHLSLGISYPNSADRAQA 111
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIV 167
+ G D+ IHG+ +AGC A+ N++M+EIYA+V
Sbjct: 112 KAAGVDPGGDIFIHGQPNLRSELKRAKKTPDWTAGCIAVKNEEMEEIYAMV 162
>gi|56694959|ref|YP_165304.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
Length = 202
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 24/141 (17%)
Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
+ P V I N+ +++ N + +LKEYK+ G K GD + PEG Y I
Sbjct: 60 YGPAVTSIVINKGARKMYLLNNEK---VLKEYKVELGFAPAGHKQFEGDGKTPEGTYLI- 115
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAH-----NRTGADLMIHGECA--------------S 149
+ NPNS + LS+ I +PN D A+ + G ++ IHGE +
Sbjct: 116 -DRRNPNSAFHLSLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWT 174
Query: 150 AGCYAMNNKQMQEIYAIVRDS 170
AGC A+ N +++EIYA+VRD
Sbjct: 175 AGCIAVKNDEIEEIYAMVRDG 195
>gi|86139674|ref|ZP_01058241.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193]
gi|85823565|gb|EAQ43773.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193]
Length = 170
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 43/183 (23%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R +LL L FL+GC D E T +R++K + +L
Sbjct: 8 RRAVLLGGLAAFLSGCAGKFRSYDGPEV--------------------TRLRLYKGQRLL 47
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ D +L+ Y I G K GD + PEG Y + + NP S Y LS+
Sbjct: 48 VL-----DGSDRVLQTYPIGLGFAPQGHKQFEGDGRTPEGTYIV--DKRNPESTYHLSVG 100
Query: 124 IGFPNEFDKAHNRT-----GADLMIHGECA-----------SAGCYAMNNKQMQEIYAIV 167
I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V
Sbjct: 101 ISYPNEADIAFAAAQGLSPGGDIFIHGGPRPGIDPTDIRDWTAGCIAVTDRQIEDIYAMV 160
Query: 168 RDS 170
+D
Sbjct: 161 KDG 163
>gi|330950757|gb|EGH51017.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae Cit 7]
Length = 187
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 30/187 (16%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P ++
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVLV------- 54
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
+ + + + + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 55 LKSVRQLQLISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLS 112
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYAMNNKQMQE 162
++I +PN D A R+ G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARSAGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRD 169
I+ +V+D
Sbjct: 173 IWDLVKD 179
>gi|330895915|gb|EGH28200.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330936942|gb|EGH41053.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. pisi str. 1704B]
gi|330975932|gb|EGH75998.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 187
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 30/187 (16%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P ++ K+
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVLV--LKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLS 112
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYAMNNKQMQE 162
++I +PN D A R+ G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRD 169
I+ +V+D
Sbjct: 173 IWDLVKD 179
>gi|83955789|ref|ZP_00964331.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83839794|gb|EAP78971.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
Length = 160
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 23/135 (17%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T +RI+K + +L + D +L+ Y I G K GD + PEG Y I +
Sbjct: 26 TRLRIYKAQRLLVL-----DGTDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYLI--DR 78
Query: 112 LNPNSKYFLSINIGFPNEFD----KAHNRT-GADLMIHGECA-----------SAGCYAM 155
NP+S + LSI I FPNE D KA ++ G D+ IHG +AGC ++
Sbjct: 79 RNPDSLFHLSIGISFPNEADIAFAKAQGKSPGGDIFIHGGPRKGIDPMNKRDWTAGCISV 138
Query: 156 NNKQMQEIYAIVRDS 170
++Q+++IYA+VRD
Sbjct: 139 TDRQIEDIYAMVRDG 153
>gi|163737962|ref|ZP_02145378.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis
BS107]
gi|161388578|gb|EDQ12931.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis
BS107]
Length = 172
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
+L+EY + G K GD + PEG Y I + NPNS+Y LSI I +PN D+A
Sbjct: 54 VLREYDMELGFAPLGHKQIEGDGKTPEGTYLI--DRRNPNSRYHLSIGISYPNGQDRAKA 111
Query: 135 ----NRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
+ G ++ IHGE +AGC A+ N +++EIYA+VRD
Sbjct: 112 SAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIEEIYAMVRDG 165
>gi|163742642|ref|ZP_02150028.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
gi|161384227|gb|EDQ08610.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
Length = 172
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
+L+EY + G K GD + PEG Y I + NPNS+Y LSI I +PN D+A
Sbjct: 54 VLREYDMELGFAPLGHKQIEGDGKTPEGTYLI--DRRNPNSRYHLSIGISYPNGQDRAKA 111
Query: 135 ----NRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
+ G ++ IHGE +AGC A+ N +++EIYA+VRD
Sbjct: 112 AAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIEEIYAMVRDG 165
>gi|78223705|ref|YP_385452.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
gi|78194960|gb|ABB32727.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
Length = 175
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 28/141 (19%)
Query: 51 PTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
PTV R+ +K++ +LE+ + L++ Y++ GPK+ GD + PEG Y +
Sbjct: 35 PTVDRVVVYKSKRLLEL-----RSGQNLIRSYRVALGRNPVGPKVRAGDFRTPEGIYRLD 89
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------S 149
+L S++F SI+I +PN D A R G D+MIHG +
Sbjct: 90 RRSL--QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWT 147
Query: 150 AGCYAMNNKQMQEIYAIVRDS 170
GC A+ N +M EI+ +VR+
Sbjct: 148 KGCIAVTNAEMTEIWHLVRNG 168
>gi|84514894|ref|ZP_01002257.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53]
gi|84511053|gb|EAQ07507.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53]
Length = 160
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 49 FHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
F P V RI FK + +++ + LL++Y + K + GD + PEG Y
Sbjct: 24 FGPDVTRIQVFKEQRKMQLLHNDK-----LLRQYDVALGFNPRDHKQQEGDGRTPEGAYV 78
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------SAGCY 153
I N NPNS++ LSI I +PN D A R G D+ IHG A + GC
Sbjct: 79 I--NRQNPNSRFHLSIGISYPNAVDVARARAMGVHPGGDIFIHGTPAPWIGMPDWTWGCI 136
Query: 154 AMNNKQMQEIYAIVR 168
A++N +M E+Y++V+
Sbjct: 137 AVSNTEMDEVYSMVQ 151
>gi|298488264|ref|ZP_07006297.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298157203|gb|EFH98290.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 187
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 127
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +VRD
Sbjct: 128 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVRD 179
>gi|237800073|ref|ZP_04588534.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806402|ref|ZP_04593106.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022928|gb|EGI02985.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027515|gb|EGI07570.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 187
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNITDSARAR 127
Query: 137 T-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC AM N M+E++ +V+D
Sbjct: 128 NEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIAMKNNDMREVWDLVKD 179
>gi|163747598|ref|ZP_02154946.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
gi|161379123|gb|EDQ03544.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
Length = 157
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 51 PTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P V R+ FK++ L ++ +LK Y+I GPK GD + PEG Y +
Sbjct: 21 PAVTRLQMFKSDRNLFLFNNTS-----VLKAYRIDLGFAAEGPKQFEGDGKTPEGTYTV- 74
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAH-----NRTGADLMIHGECA----------SAGCY 153
+ NP+S + LSI I +PNE D A+ G D+ IHG +AGC
Sbjct: 75 -DRRNPDSLFHLSIGISYPNEADIAYAAAQGQEPGGDIFIHGGPRPGIDAIKPDWTAGCI 133
Query: 154 AMNNKQMQEIYAIVRDS 170
A++++++++IYA+VRD
Sbjct: 134 AVSDREIEDIYAMVRDG 150
>gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO_1461 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851907|gb|AAO54982.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 208
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 91 LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 148
Query: 137 T-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +V+D
Sbjct: 149 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKD 200
>gi|161170313|gb|ABX59283.1| uncharacterized protein conserved in bacteria [uncultured marine
bacterium EB000_55B11]
Length = 190
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 43/182 (23%)
Query: 5 YNILLFALFIFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+NILLF FIF +GC +S ++ I P ++++ +++ FH N+
Sbjct: 25 FNILLFMAFIF-SGCFNSSTVYKSIPNYNGPKITKIVVNKSQRKLFLFH--------NDK 75
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
I+ +++K+ K + GD + PEG Y+I N N SKYFLS
Sbjct: 76 II--------------RKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRKNYN--SKYFLS 119
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA----------SAGCYAMNNKQMQEIYAI 166
+ I +PN DK + ++ G D+ IHG +AGC ++++K M+ IY++
Sbjct: 120 LGISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSM 179
Query: 167 VR 168
V+
Sbjct: 180 VK 181
>gi|114769815|ref|ZP_01447425.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255]
gi|114549520|gb|EAU52402.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255]
Length = 169
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 43/182 (23%)
Query: 5 YNILLFALFIFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+NILLF FIF +GC +S ++ I P ++++ +++ FH N+
Sbjct: 4 FNILLFMAFIF-SGCFNSSTVYKSIPNYNGPKITKIVVNKSQRKLFLFH--------NDK 54
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
I+ +++K+ K + GD + PEG Y+I N N SKYFLS
Sbjct: 55 II--------------RKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRKNYN--SKYFLS 98
Query: 122 INIGFPNEFDKAHNRT-----GADLMIHGECA----------SAGCYAMNNKQMQEIYAI 166
+ I +PN DK + ++ G D+ IHG +AGC ++++K M+ IY++
Sbjct: 99 LGISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSM 158
Query: 167 VR 168
V+
Sbjct: 159 VK 160
>gi|119385305|ref|YP_916361.1| hypothetical protein Pden_2578 [Paracoccus denitrificans PD1222]
gi|119375072|gb|ABL70665.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 171
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 23/138 (16%)
Query: 55 RIFKNENILEIWKRNVDAEYVLL------KEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
+ ++ I +I + D + L+ K YK+ + FGPK GD + PEG Y+I
Sbjct: 30 KTYQGPPITQIVVKKADRKMYLVSGKEVVKSYKVNLGNQPFGPKQFEGDGRTPEGMYFI- 88
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGECA----------SAGCY 153
+ NP S+Y LS+ I +P+ D A R G D+ IHG +AGC
Sbjct: 89 -DRFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRALNRADWTAGCI 147
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ +++++EI+ ++R +
Sbjct: 148 AVTDEEIEEIFTMLRPGV 165
>gi|163735640|ref|ZP_02143071.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149]
gi|161391068|gb|EDQ15406.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149]
Length = 170
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 43/183 (23%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R +LL L FL+GC S + P T +R++K + +L
Sbjct: 8 RRAVLLGGLAAFLSGC-------------------ASKFRSYGGP-EVTRVRLYKGQRLL 47
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ D +L+ Y + G K GD + PEG Y + + NP S Y LS+
Sbjct: 48 VL-----DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGTYIV--DKRNPESTYHLSVG 100
Query: 124 IGFPNEFDKAHNRT-----GADLMIHGECA-----------SAGCYAMNNKQMQEIYAIV 167
I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V
Sbjct: 101 ISYPNEVDIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAVTDRQIEDIYAMV 160
Query: 168 RDS 170
+D
Sbjct: 161 KDG 163
>gi|259417350|ref|ZP_05741269.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
gi|259346256|gb|EEW58070.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
Length = 203
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 24/139 (17%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V I N+ ++ N E +LKEY++ G K GD + PEG Y I +
Sbjct: 63 PPVTSIVINKGSRRMYLLN---ETKVLKEYEVGLGFAPVGHKQIEGDGRTPEGTYRI--D 117
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAG 151
NP S+++LS+ I +PN D+A+ + G D+ IHGE +AG
Sbjct: 118 RRNPRSQFYLSLGISYPNAADRAYASSLGASPGGDIFIHGEPNDRADRRRAARTQDWTAG 177
Query: 152 CYAMNNKQMQEIYAIVRDS 170
C A++N++++EI+++V D
Sbjct: 178 CIAVSNEEIEEIWSMVNDG 196
>gi|84685767|ref|ZP_01013663.1| ErfK/YbiS/YcfS/YnhG family protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84665860|gb|EAQ12334.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
HTCC2654]
Length = 222
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 17/109 (15%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
L EY + +G K + GD + PEG Y I N NP+S + LS+ + +PN+ D+ +
Sbjct: 52 LAEYDVHLGFSPYGHKQQKGDGRTPEGSYRI--NRRNPDSAFHLSVGLDYPNDTDRKIAK 109
Query: 137 -----TGADLMIHGECA----------SAGCYAMNNKQMQEIYAIVRDS 170
G D+ IHG +AGC A+ NK++++IYA+VRD
Sbjct: 110 EVGVSPGGDIFIHGGPTRKEDKNKADWTAGCIAVTNKEIEDIYAMVRDG 158
>gi|330959130|gb|EGH59390.1| hypothetical protein PMA4326_11282 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 187
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNITDAARAR 127
Query: 137 T-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
+ G+ +MIHG + GC A+ N M+E++ +V+D
Sbjct: 128 SEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREVWDLVKD 179
>gi|331019743|gb|EGH99799.1| hypothetical protein PLA106_27216 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 187
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 127
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +V+D
Sbjct: 128 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKD 179
>gi|294651441|ref|ZP_06728755.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822687|gb|EFF81576.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
19194]
Length = 212
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 30/139 (21%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I +FK++ IL++ N +++EY + G K GD + PEG Y I W N
Sbjct: 71 TKIEVFKHQRILQLKHHNE-----IIREYPMRLGFNPLGHKQFEGDGKTPEGTYSIDWRN 125
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA------------------ 148
PNS Y+ S++I +PNE D A+ + G D+MIHG
Sbjct: 126 --PNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGSVPKEYLNLPTSMTYFPQGDW 183
Query: 149 SAGCYAMNNKQMQEIYAIV 167
+ GC A+ N M EI+ +V
Sbjct: 184 TLGCIAVRNIDMDEIWQLV 202
>gi|126734435|ref|ZP_01750182.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
gi|126717301|gb|EBA14165.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
Length = 121
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
LL YKI G K++ GD + PEG Y + + NPNS + LS+ I +P+ D A
Sbjct: 8 TLLSSYKIDLGFAPVGHKVQEGDGRTPEGGYRV--DRRNPNSSFHLSLGISYPDANDIAS 65
Query: 135 NRT-----GADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
R G D+ IHG A + GC A+ N QM E+YA+V
Sbjct: 66 ARAKGVNPGGDIFIHGTPAVWERTPDWTWGCIAVTNDQMDEVYAMV 111
>gi|330811494|ref|YP_004355956.1| hypothetical protein PSEBR_a4539 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379602|gb|AEA70952.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 168
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 77 LKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LK Y+I G GPK+ GD++ PEGFY+I W + N Y+LS++I +PN D A
Sbjct: 50 LKTYRISLGRGAKKGPKLIEGDKRTPEGFYWIDWRKTSEN--YYLSMHISYPNISDAARA 107
Query: 136 R-----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
R G +MIHG S GC AM N M+E++ +V D
Sbjct: 108 RREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMREVWNLVPDG 161
>gi|146308430|ref|YP_001188895.1| hypothetical protein Pmen_3411 [Pseudomonas mendocina ymp]
gi|145576631|gb|ABP86163.1| conserved hypothetical protein [Pseudomonas mendocina ymp]
Length = 167
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 26/135 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E L + +R +K Y+I G K GD + PEGFY+I W
Sbjct: 32 VLVLKSERKLHLQRRGET-----IKSYRISLGKQPNGAKQREGDLRTPEGFYWIDWR--K 84
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------SAGCYA 154
P+ KY LS++I +PN D A + G+ +MIHG + GC A
Sbjct: 85 PSDKYQLSLHISYPNARDLARAKEAGVPPGSMIMIHGTPLDEEYPEWFFHTLDWTEGCIA 144
Query: 155 MNNKQMQEIYAIVRD 169
M N M+E++++V+D
Sbjct: 145 MKNDDMREVWSLVKD 159
>gi|226954427|ref|ZP_03824891.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
gi|226834776|gb|EEH67159.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
Length = 198
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 30/139 (21%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I +FK++ IL++ N +++EY + G K GD + PEG Y I W N
Sbjct: 57 TKIEVFKHQRILQLKHHNE-----IIREYPMRLGFNPLGHKQFEGDGKTPEGTYSIDWRN 111
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA------------------ 148
PNS Y+ S++I +PNE D A+ + G D+MIHG
Sbjct: 112 --PNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGSVPKEYLNLPTSMTYFPQGDW 169
Query: 149 SAGCYAMNNKQMQEIYAIV 167
+ GC A+ N M EI+ +V
Sbjct: 170 TLGCIAVRNIDMDEIWQLV 188
>gi|330872830|gb|EGH06979.1| hypothetical protein PSYMP_01409 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330968074|gb|EGH68334.1| hypothetical protein PSYAC_26222 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 187
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 127
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +V+D
Sbjct: 128 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKD 179
>gi|89067448|ref|ZP_01154961.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516]
gi|89047017|gb|EAR53071.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516]
Length = 164
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T ++++K + ++ + +LK Y G K GD + PEG YYI +
Sbjct: 33 TSVQVWKTDRVMALMSGTR-----VLKTYDFEMGFAPQGHKYFEGDGRTPEGVYYI--DR 85
Query: 112 LNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGECA--------SAGCYAMNNK 158
NPNS Y LSI I +P+E D A G D+ IHG +AGC A++N
Sbjct: 86 RNPNSDYHLSIGISYPDEEDIARALEAGLEPGGDIFIHGTPKLFADRTDWTAGCIAVSND 145
Query: 159 QMQEIYAIVRDS 170
++EIYA+V+D
Sbjct: 146 AVEEIYAMVQDG 157
>gi|213972051|ref|ZP_03400145.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301385883|ref|ZP_07234301.1| hypothetical protein PsyrptM_24748 [Pseudomonas syringae pv. tomato
Max13]
gi|302063774|ref|ZP_07255315.1| hypothetical protein PsyrptK_27639 [Pseudomonas syringae pv. tomato
K40]
gi|302132524|ref|ZP_07258514.1| hypothetical protein PsyrptN_14095 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923184|gb|EEB56785.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 187
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 127
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +V+D
Sbjct: 128 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKD 179
>gi|226946005|ref|YP_002801078.1| ErfK/YbiS/YcfS/YnhG-like protein [Azotobacter vinelandii DJ]
gi|226720932|gb|ACO80103.1| ErfK/YbiS/YcfS/YnhG-related protein [Azotobacter vinelandii DJ]
Length = 168
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK YK+ GPK GD++ PEG Y+I W + KY LS++I +PN D+A R
Sbjct: 51 LKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWRKA--SDKYNLSMHISYPNIRDQAQAR 108
Query: 137 T-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
G +M+HG + GC AM N ++E++++V+D
Sbjct: 109 AEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEGCIAMRNDDIREVWSLVKDG 161
>gi|71736308|ref|YP_273601.1| hypothetical protein PSPPH_1343 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487172|ref|ZP_05641213.1| hypothetical protein PsyrptA_28111 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289625953|ref|ZP_06458907.1| hypothetical protein PsyrpaN_12636 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647895|ref|ZP_06479238.1| hypothetical protein Psyrpa2_09102 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71556861|gb|AAZ36072.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323189|gb|EFW79278.1| hypothetical protein PsgB076_19577 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329540|gb|EFW85529.1| hypothetical protein PsgRace4_12078 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330867514|gb|EGH02223.1| hypothetical protein PSYAE_09719 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330874811|gb|EGH08960.1| hypothetical protein Pgy4_06879 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330894520|gb|EGH27181.1| hypothetical protein PSYMO_39125 [Pseudomonas syringae pv. mori
str. 301020]
gi|330985037|gb|EGH83140.1| hypothetical protein PLA107_08431 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009210|gb|EGH89266.1| hypothetical protein PSYTB_05857 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 187
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K++ GD++ PEGFY++ W P++ Y LS++I +PN D A R
Sbjct: 70 LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNLSMHISYPNISDSARAR 127
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +MIHG + GC A+ N M+EI+ +V+D
Sbjct: 128 REGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMREIWDLVKD 179
>gi|330504649|ref|YP_004381518.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01]
gi|328918935|gb|AEB59766.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01]
Length = 167
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 26/135 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E L + +R +K Y+I G K GD + PEGFY+I W
Sbjct: 32 VLVLKSERKLHLQQRGE-----TIKSYRISLGKQPDGAKQREGDLRTPEGFYWIDWR--K 84
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------SAGCYA 154
P+ KY LS++I +PN D A + G+ +MIHG + GC A
Sbjct: 85 PSDKYQLSLHISYPNARDLAKAKEAGVPPGSMIMIHGTPLDEEYPEWFFHTLDWTEGCIA 144
Query: 155 MNNKQMQEIYAIVRD 169
M N M+E++++V+D
Sbjct: 145 MKNDDMREVWSLVKD 159
>gi|149204465|ref|ZP_01881431.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
gi|149141964|gb|EDM30013.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
Length = 158
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 23/135 (17%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T +R++K + +L + D +L+ Y I G K GD + PEG Y I +
Sbjct: 24 TRLRMYKGQRLLVL-----DGADDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYEI--DR 76
Query: 112 LNPNSKYFLSINIGFPNEFD----KAHNRT-GADLMIHGECA-----------SAGCYAM 155
NP+S + LSI I +PNE D +A ++ G D+ +HG +AGC A+
Sbjct: 77 RNPDSLFHLSIGISYPNEADIAFAEAQGKSPGGDIFVHGGPRKGIDPMNVRDWTAGCIAV 136
Query: 156 NNKQMQEIYAIVRDS 170
++Q++EIYA+VRD
Sbjct: 137 TDRQIEEIYAMVRDG 151
>gi|237751635|ref|ZP_04582115.1| ERFK [Helicobacter bilis ATCC 43879]
gi|229373001|gb|EEO23392.1| ERFK [Helicobacter bilis ATCC 43879]
Length = 174
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 27/135 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I + K + ILE++ D + LLK Y I G K GD + PEG YYI ++
Sbjct: 36 IVVHKQKRILELY----DDKNKLLKSYPHIALGKNPQGHKEFEGDSKTPEGLYYI--DSK 89
Query: 113 NPNSKYFLSINIGFPNEFD----KAHNR-TGADLMIHGECA---------------SAGC 152
NP S+YFL++ I +PN+ D K HN+ G D+ IHG + GC
Sbjct: 90 NPKSRYFLNLGISYPNKLDIANAKKHNKNAGGDIKIHGLPNGMNIAKELFKQYGDWTDGC 149
Query: 153 YAMNNKQMQEIYAIV 167
A++N M+E+Y ++
Sbjct: 150 IALDNASMKELYEVI 164
>gi|83952906|ref|ZP_00961635.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83835697|gb|EAP74997.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 158
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T +R++K + +L + D +L+ Y + G K GD + PEG Y + +
Sbjct: 24 TRVRLYKGQRLLVL-----DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGAYVV--DK 76
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA-----------SAGCYAM 155
NP S Y LS+ I +PNE D A G D+ IHG +AGC A+
Sbjct: 77 RNPESTYHLSVGISYPNEADIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAV 136
Query: 156 NNKQMQEIYAIVRDS 170
++Q+++IYA+V+D
Sbjct: 137 TDRQIEDIYAMVKDG 151
>gi|206889453|ref|YP_002248809.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741391|gb|ACI20448.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 160
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
++K YK+ G K+ GD + PEG YYI NPNS ++ ++ I +PNE D
Sbjct: 42 IVKAYKVALGKTPVGKKVSQGDGKTPEGRYYI--IGRNPNSNFYKALKISYPNEQDIEQA 99
Query: 132 -KAHNRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
K H G +MIHG + GC A+ N++M EI+ +V D
Sbjct: 100 IKLHVNPGGGIMIHGLSKHVEYLGKYHIIDDWTEGCIAVTNEEMDEIWKLVPDG 153
>gi|116626039|ref|YP_828195.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076]
gi|116229201|gb|ABJ87910.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076]
Length = 140
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+ Y+I G K + GD + PEG Y I + NP SKY LS++I +P D
Sbjct: 28 ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTI--DRRNPKSKYHLSLHISYPEARDLDRA 85
Query: 136 R-----TGADLMIHG--------ECASAGCYAMNNKQMQEIYAIVRDS 170
R G D+MIHG + GC A++N++M EI+++V D
Sbjct: 86 REAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEMDEIWSLVPDG 133
>gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB]
gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB]
Length = 314
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 62 ILEIWKRNVD--AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
++E KR + A +LK YKI GPKI GD + PEG Y I ++ N +S+Y
Sbjct: 180 LIEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYII--DSRNRDSRYH 237
Query: 120 LSINIGFPNEFDKAHNRT-----GADLMIHG-----------ECA---SAGCYAMNNKQM 160
L+++I +PN+ D+ R G ++MIHG A + GC A+ N+++
Sbjct: 238 LALHISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEI 297
Query: 161 QEIYAIVRDS 170
+EI +VR+
Sbjct: 298 EEIARLVRNG 307
>gi|254487420|ref|ZP_05100625.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
gi|214044289|gb|EEB84927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
Length = 166
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 16/106 (15%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
+L+ Y I G K GD + PEG Y+I + NPNSK+ LS+ I +PN+ D+A+
Sbjct: 53 VLEAYDIRLGFAPVGHKAHEGDGRTPEGRYWI--DRRNPNSKFHLSLGISYPNDNDRANA 110
Query: 135 ----NRTGADLMIHGECASA---------GCYAMNNKQMQEIYAIV 167
+ G D+ IHG+ A+ GC +++N+++++IYA+V
Sbjct: 111 AALGKQPGGDIFIHGQKAADKKNINDWTWGCISVSNQEIEDIYAMV 156
>gi|260431994|ref|ZP_05785965.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415822|gb|EEX09081.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 192
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+EY I G K GD + PEG Y I + NP S+Y LS+ I +PN D A
Sbjct: 74 ILREYDIDLGFAPNGTKTRRGDGRTPEGTYLI--DRRNPRSRYHLSVGISYPNAQDIAKA 131
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
+ G D+ IHG+ +AGC A+ N +++EIYA+V++
Sbjct: 132 KAMGVDPGGDIFIHGQPNLRKELKRAKKTPDWTAGCIAVKNHEIEEIYAMVKEG 185
>gi|149912912|ref|ZP_01901446.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
gi|149813318|gb|EDM73144.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
Length = 165
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V RI N+ E+ ++ +L+ + I G K GD + PEG Y+I +
Sbjct: 30 PEVTRIIVNKGEREM---HLLHHGRVLRSFDIHLGFAPEGHKQVEGDGKTPEGEYFI--D 84
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECASA---------GCYAMN 156
NPNS + LSI I +PNE D A + G D+ IHG + GC A+
Sbjct: 85 RRNPNSSFHLSIGISYPNEMDVARAASMGMSPGGDIFIHGAPQTVRRHRPDWTEGCIAVT 144
Query: 157 NKQMQEIYAIVRDS 170
+K+M+ IYA+V+D
Sbjct: 145 DKEMEIIYAMVKDG 158
>gi|77457235|ref|YP_346740.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens Pf0-1]
gi|77381238|gb|ABA72751.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 171
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 77 LKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LK Y+I G GPK+ GD++ PEGFY+I W + K+ LS++I +PN D A
Sbjct: 53 LKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKT--SEKFNLSMHISYPNISDSARA 110
Query: 136 R-----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRD 169
R G +MIHG S GC AM N M+E++ +V D
Sbjct: 111 RREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREVWNLVPD 163
>gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5]
gi|68342764|gb|AAY90370.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 167
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I GPK+ GD++ PEG Y++ W + +Y L+++I +PN D A +R
Sbjct: 50 LKTYRISLGKKPKGPKLMEGDKRTPEGLYWLDWRKT--SDRYNLAMHISYPNITDAARSR 107
Query: 137 -----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
G +MIHG + GC AM N M+E++ +V+D
Sbjct: 108 REGVDPGGMIMIHGTPDTEEFPEQYFHTLDWTDGCIAMRNVDMREVWGLVKDG 160
>gi|253559443|gb|ACT32405.1| hypothetical protein [Pseudomonas fluorescens]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 22/114 (19%)
Query: 77 LKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LK Y+I G GPK+ GD++ PEGFY++ W + +++LS++I +PN D A
Sbjct: 50 LKTYRISLGKGAKKGPKLIEGDKRTPEGFYWLDWRKT--SDRFYLSMHISYPNISDAARA 107
Query: 136 R-----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
R G +MIHG S GC AM N M+E++ +V D
Sbjct: 108 RREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMREVWNLVPDG 161
>gi|148266084|ref|YP_001232790.1| hypothetical protein Gura_4074 [Geobacter uraniireducens Rf4]
gi|146399584|gb|ABQ28217.1| Uncharacterized protein-like protein [Geobacter uraniireducens Rf4]
Length = 171
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E ++++ K E ++K Y+I G K + GD++ PEG Y + + N
Sbjct: 36 VVVIKSERVMKLLK-----EGTVVKSYEIALGKEPVGAKAQKGDKKTPEGTYIL--DRRN 88
Query: 114 PNSKYFLSINIGFPNEFD-----KAHNRTGADLMIHGECA--------------SAGCYA 154
NSK++ SI++ +PN D K G D+MIHG + GC A
Sbjct: 89 SNSKFYRSIHVSYPNRSDLENAQKYGVSPGGDIMIHGLPKGLERVGELHTLINWTKGCIA 148
Query: 155 MNNKQMQEIYAIV 167
+ N QM EI+ +V
Sbjct: 149 VTNAQMDEIWQMV 161
>gi|159046034|ref|YP_001534828.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
gi|157913794|gb|ABV95227.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
Length = 166
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 51 PTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P V RI FK E + + E +L+ + I G K GD + PEG Y I
Sbjct: 30 PEVTRIVVFKGERRMYLMN-----EDRVLRGFDIDLGFAPEGHKQVEGDGKTPEGRYRI- 83
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG----------ECASAGCY 153
+ NPNS + LS+ I +PN D A R G ++ IHG E +AGC
Sbjct: 84 -DRRNPNSSFHLSLGISYPNTADVARARAMGQSPGGNIFIHGQPNLLGPQTEENWTAGCI 142
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N +M+EIYA+V D
Sbjct: 143 AVTNAEMEEIYAMVEDG 159
>gi|254464093|ref|ZP_05077504.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
gi|206685001|gb|EDZ45483.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
Length = 135
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--- 132
+L+EY + G K GD + PEG Y I + NPNS+Y LS+ I +PN D+
Sbjct: 17 VLREYDVDLGFAPQGHKQFEGDGKTPEGTYVI--DRRNPNSRYHLSVGISYPNVEDRATA 74
Query: 133 --AHNRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
A + G ++ IHG+ +AGC A++N ++EIYA+V+D
Sbjct: 75 EAAGKKPGGEIFIHGQPNNPKERKRAARVSDWTAGCIAVSNDDIEEIYAMVQDG 128
>gi|104783244|ref|YP_609742.1| hypothetical protein PSEEN4271 [Pseudomonas entomophila L48]
gi|95112231|emb|CAK16958.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 185
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 40/191 (20%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDK---AEHPLSENLIISMQKKRTSPFHPTV--IRIF 57
R+ + LF L + ++ + ++I K + P S ++ +P P + + +
Sbjct: 2 RWLLALFCLSVASVSQAAFTETIIRKPASTQQPASLAMV--------APQGPQIDKVLVL 53
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K+E L++ R LK Y+I G K GD++ PEG Y++ W + + +
Sbjct: 54 KSERRLQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKV--SDR 106
Query: 118 YFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------SAGCYAMNNK 158
Y L+++I +PN D A R G+ +MIHG + GC AM N
Sbjct: 107 YNLAMHISYPNITDAAKARRDGVAAGSMIMIHGTPINEEYPEWYFHTLDWTEGCIAMRND 166
Query: 159 QMQEIYAIVRD 169
M+E++++V+D
Sbjct: 167 DMREVWSMVKD 177
>gi|260576138|ref|ZP_05844131.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
gi|259021618|gb|EEW24921.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
Length = 165
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE-----F 130
+L++Y I G K GD + PEG Y I N NP+S Y LS+ I +P+E
Sbjct: 52 VLEQYDIALGFAPIGHKQFEGDGKTPEGAYQI--NFRNPDSDYHLSLKISYPDENDRAFA 109
Query: 131 DKAHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168
D+A TG D+ IHG +AGC A+ +++M+ IY++VR
Sbjct: 110 DEAGKPTGGDIFIHGHSNWKGRNKGDWTAGCIAVTDREMEVIYSMVR 156
>gi|94970797|ref|YP_592845.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
gi|94552847|gb|ABF42771.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
Length = 174
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 21/113 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
+L+ +YK+ GPK GD + PEG Y+I N +S Y+ S+ I +PN D
Sbjct: 55 LLVHQYKVSLGGQPVGPKTRQGDHRTPEGQYFI--EGRNEHSHYYKSLRISYPNATDLQR 112
Query: 135 NR-----TGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168
R G D+MIHG + GC A+ +++M EI+A+VR
Sbjct: 113 AREQKVSPGGDIMIHGLPNGERFIGKLHLLHDWTEGCIAVTDEEMDEIWALVR 165
>gi|146278672|ref|YP_001168831.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556913|gb|ABP71526.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
17025]
Length = 164
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA-- 133
+L++Y I G K GD + PEG Y+I + NP S Y LS+ I +PN D+
Sbjct: 51 VLRQYDIGLGFKPTGHKQYEGDGRTPEGVYFI--DRQNPRSSYHLSLGISYPNTADQKMA 108
Query: 134 ---HNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168
+ G D+ IHG +AGC A+ +++++EIYA+VR
Sbjct: 109 FLEGKKPGGDIFIHGRGKYNGPNKRDWTAGCIAVTDQEVEEIYAMVR 155
>gi|257459222|ref|ZP_05624341.1| protein erfk [Campylobacter gracilis RM3268]
gi|257443607|gb|EEV18731.1| protein erfk [Campylobacter gracilis RM3268]
Length = 186
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 27/135 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
IR++K++ ILEI A K YKI G K GD + PEG Y I N N
Sbjct: 50 IRVYKSKRILEILTSKGVA-----KSYKIALGREPEGHKEVQGDGKTPEGNYTI--NGKN 102
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT-----GADLMIH---------GECASA------GCY 153
PNS Y L++ I +PN+ D AH ++ G D+ IH G+ +A GC
Sbjct: 103 PNSAYHLNLGISYPNKADVAHAKSLGKSAGGDIKIHGLPNKFSYLGQSIAAFGDWTEGCI 162
Query: 154 AMNNKQMQEIYAIVR 168
A+ N M E++ V+
Sbjct: 163 ALVNDDMDELFEHVK 177
>gi|167644675|ref|YP_001682338.1| hypothetical protein Caul_0707 [Caulobacter sp. K31]
gi|167347105|gb|ABZ69840.1| conserved hypothetical protein-like protein [Caulobacter sp. K31]
Length = 178
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
L+ Y+I G PK GD + PEG Y I NP S Y LS+ IG+P A R
Sbjct: 61 LRTYRISLGRGGLAPKAREGDGRTPEGDYRI--AGRNPKSAYHLSLRIGYPTPAQTADAR 118
Query: 137 -----TGADLMIH----GECASA----------GCYAMNNKQMQEIYAIVRDSLR 172
G D+MIH G A A GC A+ + +++EI+ + +D R
Sbjct: 119 GRGVDPGGDIMIHGLPNGRGALARYYAGRDWTDGCVAVTDAEVEEIWRLTQDDAR 173
>gi|85707004|ref|ZP_01038093.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
gi|85668445|gb|EAQ23317.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
Length = 158
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T +R++K + L + D +L+ Y I G K GD + PEG Y I +
Sbjct: 24 TRLRMYKAQRFLVL-----DGVDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYVI--DR 76
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA-----------SAGCYAM 155
NP S + LSI I +PN D A + G D+ IHG +AGC A+
Sbjct: 77 RNPESLFHLSIGISYPNAADIAFAQAQGKSPGGDIFIHGGPRKGIDPMNVRDWTAGCIAV 136
Query: 156 NNKQMQEIYAIVRDS 170
++Q++EIYA+VRD
Sbjct: 137 TDRQIEEIYAMVRDG 151
>gi|126724610|ref|ZP_01740453.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium
HTCC2150]
gi|126705774|gb|EBA04864.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium
HTCC2150]
Length = 166
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 51 PTVIR--IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
PTV R +FK L I+ +L +++ G K GD + PEG Y+I
Sbjct: 31 PTVTRLAVFKESRKLYIFHNET-----VLAAHEVELGFAPVGHKEVEGDGKTPEGRYFI- 84
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAH-----NRTGADLMIHGECA---------SAGCYA 154
+ NPNS + LS+ I +PN+ D+ G D+ IHG+ + +AGC +
Sbjct: 85 -DRRNPNSSFHLSLGISYPNDADRKAAAELGESPGGDIFIHGQKSLTNRGGDDWTAGCIS 143
Query: 155 MNNKQMQEIYAIV 167
+ N +M++IYA+V
Sbjct: 144 VTNDEMEDIYAMV 156
>gi|260429237|ref|ZP_05783214.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
gi|260419860|gb|EEX13113.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
Length = 173
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 50/187 (26%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
IL+ AL L C S P +++ +R H N+ +LE +
Sbjct: 7 ILIIALLGGLGACS---SKFRTYNGPEVTQVVVKKSTRRMYLLH--------NDKVLESY 55
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ + K+Y+ GD + PEG Y+I + NPNS + LSI I +
Sbjct: 56 DIGLGFQPQGHKQYE--------------GDGKTPEGLYFI--DRRNPNSNFHLSIGISY 99
Query: 127 PNEFDKAHNRT-----GADLMIHGECA------------------SAGCYAMNNKQMQEI 163
PN +D+A + G D+ IHG + GC A+++++M++I
Sbjct: 100 PNPYDRAFAASSGKSPGGDIFIHGGPPKDKKRRGGGSWRSNGRDWTWGCIAVSDREMEDI 159
Query: 164 YAIVRDS 170
YA+VRD
Sbjct: 160 YAMVRDG 166
>gi|213028217|ref|ZP_03342664.1| hypothetical protein Salmonelentericaenterica_40310 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 99
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N
Sbjct: 37 PVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRN 95
Query: 111 NLNP 114
L P
Sbjct: 96 QLKP 99
>gi|160875753|ref|YP_001555069.1| hypothetical protein Sbal195_2641 [Shewanella baltica OS195]
gi|160861275|gb|ABX49809.1| conserved hypothetical protein [Shewanella baltica OS195]
Length = 188
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK
Sbjct: 70 ILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRA 127
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ +V
Sbjct: 128 KALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVV 178
>gi|304409118|ref|ZP_07390739.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
gi|307303121|ref|ZP_07582876.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
gi|304352939|gb|EFM17336.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
gi|306913481|gb|EFN43903.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
Length = 188
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK
Sbjct: 70 ILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRA 127
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ +V
Sbjct: 128 KALGIRPGGMIMIHGQNPKSPLSPEQAQQYNWTDGCIAITNAEMDEVWKVV 178
>gi|288941780|ref|YP_003444020.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
gi|288897152|gb|ADC62988.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
Length = 210
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 24/117 (20%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++++Y++ G K GD++ PEG Y + W NP S ++ +I+I +P D+A +
Sbjct: 89 VVRQYRVALGGAPVGHKYREGDQRTPEGRYTLNWR--NPKSNFYKAIHISYPTAKDRATS 146
Query: 136 R------TGADLMIHG-----ECAS-----------AGCYAMNNKQMQEIYAIVRDS 170
R G +MIHG + AS GC A+ N +M EI+++V+D
Sbjct: 147 RQLGYSNPGGMIMIHGLPNYIQSASLRQQYANRDWTQGCIAVQNHEMDEIWSLVKDG 203
>gi|126174741|ref|YP_001050890.1| hypothetical protein Sbal_2528 [Shewanella baltica OS155]
gi|153001040|ref|YP_001366721.1| hypothetical protein Shew185_2521 [Shewanella baltica OS185]
gi|217973000|ref|YP_002357751.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
gi|125997946|gb|ABN62021.1| conserved hypothetical protein [Shewanella baltica OS155]
gi|151365658|gb|ABS08658.1| conserved hypothetical protein [Shewanella baltica OS185]
gi|217498135|gb|ACK46328.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
Length = 188
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK
Sbjct: 70 ILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRA 127
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ +V
Sbjct: 128 KALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVV 178
>gi|148264213|ref|YP_001230919.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
gi|146397713|gb|ABQ26346.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
Length = 337
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK YKI GPK GD + PEG Y+I ++ N +S Y LS++I +PNE DK
Sbjct: 219 VLKTYKIALGGNPNGPKERQGDNKTPEGTYFI--DSRNKDSHYHLSLHISYPNERDKKRA 276
Query: 136 R-----TGADLMIHG-------------ECA-SAGCYAMNNKQMQEIYAIV 167
+ TG ++MIHG E + GC A+ +++++EI +
Sbjct: 277 KELGVSTGGNIMIHGIKNGFSWVGDFHTEVDWTKGCIAVTDEEIEEIAKLA 327
>gi|315267942|gb|ADT94795.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
Length = 170
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK
Sbjct: 52 ILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRA 109
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ +V
Sbjct: 110 KALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVV 160
>gi|163732991|ref|ZP_02140435.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
gi|161393526|gb|EDQ17851.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
Length = 159
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 16/108 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LLK Y I G K GD + PEG Y I + NPNS + LS+ I +PN D A
Sbjct: 46 LLKSYDIHLGFAPVGHKQFEGDGKTPEGLYRI--DRRNPNSDFHLSLGISYPNVNDYAAA 103
Query: 136 R-----TGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRD 169
+ G D+ IHG+ + + GC A+ N +M+EIYA+V++
Sbjct: 104 KAVGKSAGGDIFIHGQKSPFRNDDPDWTWGCIAVTNPEMEEIYAMVQN 151
>gi|167032069|ref|YP_001667300.1| hypothetical protein PputGB1_1056 [Pseudomonas putida GB-1]
gi|166858557|gb|ABY96964.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 184
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P+ S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PVPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKQ--SDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGECA--------------SAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRD 169
+ +VRD
Sbjct: 171 WELVRD 176
>gi|119713560|gb|ABL97612.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured marine bacterium
EB0_39F01]
Length = 160
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P + +I N++ +++ + D ++K++K+ K + GD + PEG Y+I
Sbjct: 24 PKITKIVVNKSQRKLFLFHNDK---IIKKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK 80
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA----------SAGCYAM 155
N N SKYFLS+ I +PN DK + ++ G D+ IHG +AGC ++
Sbjct: 81 NYN--SKYFLSLGISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISV 138
Query: 156 NNKQMQEIYAIVR 168
++K M+ IY++V+
Sbjct: 139 SDKNMKVIYSMVK 151
>gi|308535397|ref|YP_002140778.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
bemidjiensis Bem]
gi|308052742|gb|ACH40982.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
domain-containing protein [Geobacter bemidjiensis Bem]
Length = 335
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 25/150 (16%)
Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD--AEYVLLKEYKICAWSGTFGPKIETG 96
I+ Q++ SP P V ++ ++E +R + ++ ++K YKI GPK G
Sbjct: 180 IAAQEEEISP--PPVPTGPADKVLIEKKERRLTLLSKGEVIKSYKISLGENPNGPKERQG 237
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--- 148
D + PEG Y I ++ N +S+Y LS++I +PNE DK + G ++MIHG
Sbjct: 238 DNKTPEGIYRI--DSRNNDSQYHLSLHISYPNEQDKKRAKQLGVAPGGNIMIHGMRNGFS 295
Query: 149 -----------SAGCYAMNNKQMQEIYAIV 167
+ GC A+ ++++QEI +V
Sbjct: 296 WFGEHHTLIDWTKGCIAVTDEEIQEIAELV 325
>gi|170723329|ref|YP_001751017.1| hypothetical protein PputW619_4168 [Pseudomonas putida W619]
gi|169761332|gb|ACA74648.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 184
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 9 LFALFIF----LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV--IRIFKNENI 62
LFALF ++ + ++I K + PL Q + + P + + + K+E
Sbjct: 4 LFALFCLCVTSVSQAAFTETIIRKPQPPLPA------QSQSQAAMQPLIDKVLVIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ LS+
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWRKQ--SDRFNLSM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGECA--------------SAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N M+E+
Sbjct: 111 HITYPNISDAARATREGWSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNSDMREV 170
Query: 164 YAIVRD 169
+ +V D
Sbjct: 171 WDLVPD 176
>gi|77464780|ref|YP_354284.1| hypothetical protein RSP_1201 [Rhodobacter sphaeroides 2.4.1]
gi|221640697|ref|YP_002526959.1| hypothetical protein RSKD131_2598 [Rhodobacter sphaeroides KD131]
gi|77389198|gb|ABA80383.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|221161478|gb|ACM02458.1| Hypothetical Protein RSKD131_2598 [Rhodobacter sphaeroides KD131]
Length = 166
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA-- 133
+L++Y + G K GD + PEG Y+I + NP S Y LS+ I +PN D+
Sbjct: 53 VLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFI--DRQNPRSTYHLSLGISYPNVLDQKMA 110
Query: 134 ---HNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168
+ G D+ IHG +AGC A+ + +++E+Y++VR
Sbjct: 111 FLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYSMVR 157
>gi|84500743|ref|ZP_00998992.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
gi|84391696|gb|EAQ04028.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK Y+I G K GD + PEG Y I + NP+S++ LS+ + +PN D A
Sbjct: 51 VLKSYRIGLGFAPVGHKQFEGDGRTPEGTYRI--DRRNPDSEFHLSVGLSYPNTRDVAFA 108
Query: 136 RT-----GADLMIHG----------ECASAGCYAMNNKQMQEIYAIVRDS 170
+ G D+ IHG +AGC A+ N ++++IYA+V+D
Sbjct: 109 TSQGKSPGGDIFIHGLPNRFKKSGSRDWTAGCIAVRNHEIEDIYAMVKDG 158
>gi|327479744|gb|AEA83054.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 167
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K GD + PEGFY+I W + KY LS++I +PN D A +
Sbjct: 50 LKSYRISLGKQPNGAKQREGDMRTPEGFYWIDWRKT--SDKYNLSMHISYPNARDLARAQ 107
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +M+HG + GC A+ N M+EI+ +V+D
Sbjct: 108 QEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREIWGLVKD 159
>gi|126463622|ref|YP_001044736.1| hypothetical protein Rsph17029_2862 [Rhodobacter sphaeroides ATCC
17029]
gi|332559675|ref|ZP_08413997.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N]
gi|126105286|gb|ABN77964.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
gi|332277387|gb|EGJ22702.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N]
Length = 164
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA-- 133
+L++Y + G K GD + PEG Y+I + NP S Y LS+ I +PN D+
Sbjct: 51 VLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFI--DRQNPRSTYHLSLGISYPNVLDQKMA 108
Query: 134 ---HNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168
+ G D+ IHG +AGC A+ + +++E+Y++VR
Sbjct: 109 FLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYSMVR 155
>gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100]
gi|39575740|emb|CAE79907.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 204
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 23/116 (19%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN----EF 130
LLK Y + G K GD + PEG Y I + NP S+Y ++++ +PN EF
Sbjct: 79 TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDYK--NPQSQYTKALHVSYPNKADVEF 136
Query: 131 DKAHNRT-GADLMIHGECA----------------SAGCYAMNNKQMQEIYAIVRD 169
KA ++ G D+MIHG + + GC A+ N +++EIY++V++
Sbjct: 137 AKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGCVAVTNPEIEEIYSLVKE 192
>gi|150395748|ref|YP_001326215.1| hypothetical protein Smed_0524 [Sinorhizobium medicae WSM419]
gi|150027263|gb|ABR59380.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 180
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ +FK +L++++ LL+EY + GPK GD++ PEG Y + W N
Sbjct: 45 VIVFKERRVLQLFQGEK-----LLREYPVVLGGNPVGPKRREGDQKTPEGSYVLDWR--N 97
Query: 114 PNSKYFLSINIGF--PNEFDKAHNR---TGADLMIHGEC--------------ASAGCYA 154
P S ++ SI+I + P + ++A R G +MIHG+ + GC A
Sbjct: 98 PGSSFYKSIHISYPAPKDLEEAAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIA 157
Query: 155 MNNKQMQEIYAIV 167
+ N +M EI+ +V
Sbjct: 158 VTNAEMDEIWDMV 170
>gi|262371690|ref|ZP_06064969.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
gi|262311715|gb|EEY92800.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
Length = 179
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 32/151 (21%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+T P T I +FK + W+ + +++ Y I G K GD + PEG
Sbjct: 33 KTKPV--TTIEVFKQQ-----WQLKLKHHDQIIRSYPIRLGFNPMGHKQFEGDGKTPEGT 85
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECASA--------- 150
Y I W NP S Y+ S++I +PN D + + G D+MIHG +
Sbjct: 86 YTIDWR--NPQSAYYKSLHISYPNPNDLTYAKQRQKSAGGDVMIHGTVPTPATALPASST 143
Query: 151 ---------GCYAMNNKQMQEIYAIVRDSLR 172
GC A+ N M EI+ +V++ +
Sbjct: 144 YMPRKDWTLGCIAVTNADMDEIWQLVKNGTQ 174
>gi|209546383|ref|YP_002278273.1| hypothetical protein Rleg2_6003 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539240|gb|ACI59173.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 27/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
IR++K+E + + K +V + Y+I + GPK GDE+ PEG Y I W
Sbjct: 43 IRVYKSERRMVLLKGDVP-----ISTYRISLGKAADAGPKQREGDEKTPEGHYEIDWR-- 95
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGA-----DLMIHGECA--------------SAGCY 153
NP S LS++I +P+ D+ + G+ ++MIHG + GC
Sbjct: 96 NPKSMAHLSLHISYPSPDDQRNAAAGSFPPGGNIMIHGLPNGWGLFRQAHRLWDWTDGCI 155
Query: 154 AMNNKQMQEIYAIVRD 169
A+ N +M++I+A V D
Sbjct: 156 AVTNAEMRDIWARVPD 171
>gi|325273813|ref|ZP_08140000.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51]
gi|324101053|gb|EGB98712.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E L++ R LK Y+I G K GD++ PEG Y++ W
Sbjct: 49 VLVIKSERRLQLISRGEP-----LKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWRKQ- 102
Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGECA--------------SAGCYA 154
+ ++ L+++I +PN D A G+ +MIHG + GC A
Sbjct: 103 -SDRFNLAMHINYPNSNDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIA 161
Query: 155 MNNKQMQEIYAIVRD 169
M N+ MQE++ +VRD
Sbjct: 162 MRNRDMQEVWNLVRD 176
>gi|254466238|ref|ZP_05079649.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
gi|206687146|gb|EDZ47628.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
Length = 175
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 48 PFHPTVIRIFKNENIL-EIWKRNVDA----EYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
P P + + + IL E R + A E VL E+ I G KI+ GD + PE
Sbjct: 28 PVPPQATAVDRIDRILIEKSARRLTASRGGETVL--EFPIALGFEPAGDKIQEGDGKTPE 85
Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECAS-------- 149
G + I + NPNS Y LS+ I +P D+A R G D+ IHG+ S
Sbjct: 86 GTFRI--DRRNPNSAYHLSLGIDYPQPGDRARARAAGVSPGGDIFIHGQPNSLGTLITLP 143
Query: 150 ----AGCYAMNNKQMQEIYAIV 167
AGC A++N QM+ ++ +
Sbjct: 144 GDWTAGCIAVSNDQMETLWRLA 165
>gi|148549476|ref|YP_001269578.1| hypothetical protein Pput_4270 [Pseudomonas putida F1]
gi|148513534|gb|ABQ80394.1| conserved hypothetical protein [Pseudomonas putida F1]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PAPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKQ--SDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGECA--------------SAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATRAGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRD 169
+ +VRD
Sbjct: 171 WDLVRD 176
>gi|85373228|ref|YP_457290.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594]
gi|84786311|gb|ABC62493.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594]
Length = 169
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA-- 148
GDE+ PEG Y I + NPNS Y+LS+ + +PN D+A+ G D+ +HG+
Sbjct: 74 GDERTPEGRYTI--DTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWL 131
Query: 149 ---------SAGCYAMNNKQMQEIYAIVRDS 170
+ GC A N +M E++ +VRD
Sbjct: 132 PAGRMPGDWTDGCIAFTNAEMDELWRLVRDG 162
>gi|253702667|ref|YP_003023856.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
gi|251777517|gb|ACT20098.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
Length = 331
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++K YKI GPK GD + PEG Y I ++ N +S+Y LS++I +PNE DK
Sbjct: 213 VIKSYKISLGENPNGPKERQGDNKTPEGIYRI--DSRNNDSQYHLSLHISYPNEQDKRRA 270
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIV 167
+ G ++MIHG + GC A+ ++++QEI +V
Sbjct: 271 KQLGVSPGGNVMIHGMRNGFSWFGEHHTSIDWTKGCIAVTDEEIQEIAELV 321
>gi|26988184|ref|NP_743609.1| hypothetical protein PP_1451 [Pseudomonas putida KT2440]
gi|24982920|gb|AAN67073.1|AE016336_5 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313500324|gb|ADR61690.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PAPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKQ--SDRFNLAM 110
Query: 123 NIGFPNEFDKAH-NRTGAD----LMIHGECA--------------SAGCYAMNNKQMQEI 163
+I +PN D A R G + +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRD 169
+ +VRD
Sbjct: 171 WDLVRD 176
>gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100]
gi|39574683|emb|CAE78525.1| unnamed protein product [Bdellovibrio bacteriovorus HD100]
Length = 220
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
LL+ Y + G K GD + PEG Y I + N P S++ S+++ +PN+ D A+
Sbjct: 94 TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYKN--PKSQFTKSLHVDYPNKADIAY 151
Query: 135 NRT-----GADLMIHGECA----------------SAGCYAMNNKQMQEIYAIVRD 169
++ G D+MIHG + + GC A+ NK+++EIYA+V++
Sbjct: 152 AKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGCIAVTNKEIEEIYALVKE 207
>gi|327192576|gb|EGE59525.1| hypothetical protein RHECNPAF_213007 [Rhizobium etli CNPAF512]
Length = 179
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 32/147 (21%)
Query: 48 PFHPT-----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAP 101
P PT +IR++K+E + + + + + Y+I S GPK GDE+ P
Sbjct: 32 PVAPTEQRADLIRVYKSERRMVLLRGDAP-----IATYQISLGSAADAGPKQREGDEKTP 86
Query: 102 EGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA-------- 148
EG Y I W NP S LS++I +PN ++ G +MIHG
Sbjct: 87 EGRYEIDWR--NPKSMAHLSLHISYPNPKERRAAEANGFPPGGSIMIHGLPNGWGLLGQA 144
Query: 149 ------SAGCYAMNNKQMQEIYAIVRD 169
+ GC A+ N +M+EI+A V D
Sbjct: 145 HRLWDWTDGCIAVTNTEMREIWARVPD 171
>gi|319784695|ref|YP_004144171.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170583|gb|ADV14121.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 163
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +L+ Y I G K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVLRNYGIALGGDPVGHKHQEGDQRTPEGNYVLDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NPNS SI+I +PN D+A + G +MIHG+ + GC
Sbjct: 80 NPNSIAHKSIHISYPNADDEAAAKARNVGAGGMIMIHGQPNGYGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A+V D
Sbjct: 140 AVTDSDMDEIWALVADG 156
>gi|261414486|ref|YP_003248169.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370942|gb|ACX73687.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326024|gb|ADL25225.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 174
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN-----EF 130
++K YKI G K+++GD + PEG Y I NP S + LS+ + +PN
Sbjct: 54 IVKTYKISLGKNPVGAKVKSGDNKTPEGNYTI--ERHNPKSIFHLSLKVSYPNAEQIKAA 111
Query: 131 DKAHNRTGADLMIHG----------------ECASAGCYAMNNKQMQEIYAIVRD 169
+ + G D+MIHG + +AGC A+ N +++EIY V+D
Sbjct: 112 KEGNYEPGGDIMIHGYPNKIPAFLFKFWHKWKDWTAGCIAVTNDEIEEIYDAVKD 166
>gi|187251137|ref|YP_001875619.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191]
gi|186971297|gb|ACC98282.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191]
Length = 189
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+L FAL G ++ + + + EN +I I I K + I+E+
Sbjct: 19 GVLFFALRGNAAGIPLTKEEQENLKKEIPENAVIDK------------IVILKEKRIMEV 66
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
++ LLK YKI G K + GD + PEG Y + + NP+S+Y+ ++ +
Sbjct: 67 SQKEE-----LLKSYKISLGFEPKGHKEQQGDGKTPEGIYKV--DGKNPHSRYYKNLGVS 119
Query: 126 FPNEFDKAHNRT-----GADLMIHGECA-------------SAGCYAMNNKQMQEIY 164
+PN+ D+A + G D+ IHG + GC A+ N ++ EIY
Sbjct: 120 YPNDKDRAAAKAKGINPGGDIKIHGIGKDYWHIKENILGDWTLGCIAVTNAEIDEIY 176
>gi|146281566|ref|YP_001171719.1| hypothetical protein PST_1182 [Pseudomonas stutzeri A1501]
gi|145569771|gb|ABP78877.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 167
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y+I G K GD + PEG Y+I W + KY LS++I +PN D A +
Sbjct: 50 LKSYRISLGKQPNGAKQREGDMRTPEGLYWIDWRKT--SDKYNLSMHISYPNARDLARAQ 107
Query: 137 -----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G+ +M+HG + GC A+ N M+EI+ +V+D
Sbjct: 108 QEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREIWGLVKD 159
>gi|120598543|ref|YP_963117.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
gi|146293378|ref|YP_001183802.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
gi|120558636|gb|ABM24563.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
gi|145565068|gb|ABP76003.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
gi|319426681|gb|ADV54755.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200]
Length = 171
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK
Sbjct: 53 VLKQYRIAMGDLPAGHKLKEGDQRTPQGRYILDYK--KPDSAYYKSIHISYPNEEDKLRA 110
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRD 169
+ G +MIHG+ + GC A+ N +M E++ V +
Sbjct: 111 KALGIKPGGMIMIHGQDPKSPLSPAQAQQFNWTNGCIALTNAEMDELWKAVDE 163
>gi|85707820|ref|ZP_01038886.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1]
gi|85689354|gb|EAQ29357.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1]
Length = 193
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 26/145 (17%)
Query: 45 RTSPFHPTV---IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQA 100
R+ P P V + I K+E +L ++ +K Y+ + T G K GDE+
Sbjct: 49 RSIPSRPPVADYLLIDKSERLLVAYQNGRP-----IKAYRGLQFGDTPMGHKRFEGDERT 103
Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA----HNRT-GADLMIHGECA------- 148
PEG Y I + NP S++ LS+ I +PN D+A + R+ G D+ IHG+
Sbjct: 104 PEGLYTI--DTRNPQSRFHLSLRISYPNRQDRAFAAQYGRSPGGDIFIHGQPTGRPGRMR 161
Query: 149 ---SAGCYAMNNKQMQEIYAIVRDS 170
+ GC A++N +++E++ +V D
Sbjct: 162 GDWTDGCIALSNTEIEELWQLVPDG 186
>gi|222053244|ref|YP_002535606.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221562533|gb|ACM18505.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 323
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 31/160 (19%)
Query: 35 ENLIISMQKK------RTSPFHPTVIRIFKNENILEIWKRNVD--AEYVLLKEYKICAWS 86
EN I +QKK + S T+ ++ + ++E +R + ++ +LK Y+I
Sbjct: 158 ENEITLLQKKIEGLEQKISAL--TIQKVTADRILIEKKQRRLTLFSKGEVLKTYRIALGG 215
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADL 141
GPK GD + PEG Y+I ++ N +S+Y L+++I +PNE DK + G ++
Sbjct: 216 NPDGPKERQGDNKTPEGTYFI--DSRNRDSRYHLALHISYPNERDKRRAKELGVAPGGNI 273
Query: 142 MIHG--------------ECASAGCYAMNNKQMQEIYAIV 167
MIHG + GC A+ ++++ EI V
Sbjct: 274 MIHGLKNGFSYVGDLHTKADWTKGCIAVTDEEIAEIAKAV 313
>gi|298506428|gb|ADI85151.1| lipoprotein, putative [Geobacter sulfurreducens KN400]
Length = 174
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 21/113 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K E GD + PEG Y I L NSKY ++++ +P+ D A +
Sbjct: 57 LKTYEVSLGKEPVGKKTEEGDGRTPEGIYSIDRRKL--NSKYHRALHVSYPSAEDTAQAK 114
Query: 137 T-----GADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVRDS 170
G D+MIHG + GC A+ N +++EI+ +V D
Sbjct: 115 ARGVSPGGDIMIHGLPNGIGFIGKLHTKRDWTLGCIAVTNPEIEEIWRVVPDG 167
>gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099]
gi|14026991|dbj|BAB53587.1| mlr7497 [Mesorhizobium loti MAFF303099]
Length = 163
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +L+ Y I S K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFD----KAHN-RTGADLMIHGEC--------------ASAGCY 153
NPNS SI+I +PN D KA N G +MIHG+ + GC
Sbjct: 80 NPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A+V D
Sbjct: 140 AVTDSDMDEIWAMVADG 156
>gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.]
Length = 337
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 26/133 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K E L + +N +LK YKI GPK GD + PEG Y+I ++ N
Sbjct: 202 ILIEKKERRLTLMSKNK-----VLKTYKIALGENPDGPKERQGDYKTPEGIYFI--DSRN 254
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYA 154
+ +Y LS++I +PNE DK + G D++IHG + GC A
Sbjct: 255 NSRRYHLSLHISYPNENDKKRAKALGISPGGDIVIHGIKNGFSWVGDLHTKFNWTKGCIA 314
Query: 155 MNNKQMQEIYAIV 167
+ + +++EI +V
Sbjct: 315 VTDDEIEEIDKLV 327
>gi|291279132|ref|YP_003495967.1| hypothetical protein DEFDS_0732 [Deferribacter desulfuricans SSM1]
gi|290753834|dbj|BAI80211.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 168
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
+LK + I G K + GDE+ PEG Y++ + N S+Y+ SI+I +PN D
Sbjct: 50 ILKSFHIALGGNPKGAKQKQGDEKTPEGIYFLDYK--NERSRYYKSIHISYPNTSDVKRA 107
Query: 132 -KAHNRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
K G D+MIHG+ + GC A++NK M I+ +V+
Sbjct: 108 KKMGVSPGGDIMIHGQKKGWGWLSFISQKFDWTKGCIAVSNKDMDVIWKMVK 159
>gi|39995292|ref|NP_951243.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|307634660|gb|ADI83018.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
domain-containing [Geobacter sulfurreducens KN400]
Length = 309
Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++ YK+ GPK GD + PEG Y I N S+Y LS+ I +PNE DK
Sbjct: 191 VIRTYKVALGGNPVGPKERQGDNKTPEGSYVI--EGRNKGSRYHLSLRISYPNEKDKKRA 248
Query: 136 RT-----GADLMIHG 145
R G D+MIHG
Sbjct: 249 REMGVSPGGDIMIHG 263
>gi|241667037|ref|YP_002985121.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862494|gb|ACS60159.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
IR++K E + + K + + Y+I + GPK GDE+ PEG Y I W
Sbjct: 43 IRVYKTERRMVLLKGDTP-----ISTYRISLGQAADEGPKQREGDEKTPEGRYEIDWR-- 95
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCY 153
NP S LS++I +P+ D+ + G ++MIHG + GC
Sbjct: 96 NPKSMAHLSLHISYPDPDDRRNAEAGGFPPGGNIMIHGLPNGWGLFGNAHQLWDWTDGCI 155
Query: 154 AMNNKQMQEIYAIV 167
A+ N +M+EI+A V
Sbjct: 156 AVTNAEMREIWARV 169
>gi|260460299|ref|ZP_05808551.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
gi|259033944|gb|EEW35203.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
Length = 163
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +++ Y I G K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVVRSYGIALGGAPVGHKHQEGDQRTPEGRYILDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NPNS + SI++ +PN D A + G +MIHG+ + GC
Sbjct: 80 NPNSIAYKSIHVSYPNADDLAAAKRRNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A V D
Sbjct: 140 AVTDSDMDEIWAKVADG 156
>gi|293611082|ref|ZP_06693381.1| predicted protein [Acinetobacter sp. SH024]
gi|292826734|gb|EFF85100.1| predicted protein [Acinetobacter sp. SH024]
Length = 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+T P T I +FKN+ +L + K N D ++++Y I G K D + PEG
Sbjct: 32 KTKPV--TSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHKHFENDGRTPEGI 84
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFD----KAHNR-TGADLMIHGECASA--------- 150
Y I W N S Y+ S++I +P+ D K HN+ TG D+MIHG +
Sbjct: 85 YSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSVPKSLLSMPFSST 142
Query: 151 ---------GCYAMNNKQMQEIYAIV 167
GC A+ N + EI+ +V
Sbjct: 143 YMPHKDWTLGCIAVRNVDIDEIWQLV 168
>gi|255261385|ref|ZP_05340727.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62]
gi|255103720|gb|EET46394.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62]
Length = 175
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L++Y G K GD + PEG Y+I + NPNS++ LS+ I +PN D
Sbjct: 62 VLEKYDFALGFEPVGRKQVEGDGKTPEGNYFI--DRRNPNSRFHLSLGISYPNANDVEVA 119
Query: 136 RT-----GADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
R G D+ IHG + GC A+ +++M++IYA+V++
Sbjct: 120 RALGMPPGGDIFIHGTPKRFRNSDDDWTWGCIAVKDREMEQIYAMVKNG 168
>gi|257454799|ref|ZP_05620050.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
gi|257447732|gb|EEV22724.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
Length = 185
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY I G K + GDE+ PEG+Y + W N S + S+++ +PN D+A+
Sbjct: 67 VIREYNIALGDNPKGHKQQEGDERTPEGWYTLDW--ANEQSAAYRSLHVSYPNSKDRANA 124
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
+ G +MIHG+ GC A+ N +M EI +V+
Sbjct: 125 KMLGVSPGGAIMIHGQMNGTELLTAFNQKRDWTNGCIAVTNSEMDEIMTLVK 176
>gi|325123406|gb|ADY82929.1| hypothetical protein BDGL_002343 [Acinetobacter calcoaceticus
PHEA-2]
Length = 193
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+T P T I +FKN+ +L + K N D ++++Y I G K D + PEG
Sbjct: 47 KTKPV--TSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHKHFENDGRTPEGI 99
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFD----KAHNR-TGADLMIHGECASA--------- 150
Y I W N S Y+ S++I +P+ D K HN+ TG D+MIHG +
Sbjct: 100 YSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSVPKSLLSMPFSST 157
Query: 151 ---------GCYAMNNKQMQEIYAIV 167
GC A+ N + EI+ +V
Sbjct: 158 YMPHKDWTLGCIAVRNVDIDEIWQLV 183
>gi|83950747|ref|ZP_00959480.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83838646|gb|EAP77942.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 161
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
+LK Y I G K GD + PEG Y I + NPNS + LSI + +PN D+A+
Sbjct: 47 VLKAYDIDLGFAPEGHKQFQGDGKTPEGRYVI--DRRNPNSDFHLSIGLDYPNMRDRAYA 104
Query: 135 ----NRTGADLMIHGECA----------SAGCYAMNNKQMQEIYAIVRDS 170
G D+ IHG +AGC ++ ++++++IYA+V++
Sbjct: 105 LAQGKTPGGDIFIHGRPNTKKKGNGPDWTAGCISVKDREIEDIYAMVKNG 154
>gi|83649037|ref|YP_437472.1| hypothetical protein HCH_06401 [Hahella chejuensis KCTC 2396]
gi|83637080|gb|ABC33047.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 178
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 75 VLLKE------YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+LLKE Y I G K GDE+ PEG Y + W NPNS + SI++ +PN
Sbjct: 51 ILLKEGKPFRVYPIALGDKPLGHKQFEGDERTPEGTYSLDWR--NPNSAFHKSIHVSYPN 108
Query: 129 ----EFDKAHNR-TGADLMIHGECA----------------SAGCYAMNNKQMQEIYAIV 167
E+ K+ R G +MIHG + GC A+NN+ M EI+++V
Sbjct: 109 DQDIEYAKSQGREPGGMIMIHGWPNGFNHDRDSIWLYEFDWTDGCIAVNNQAMDEIWSLV 168
Query: 168 RDS 170
D
Sbjct: 169 PDG 171
>gi|110677799|ref|YP_680806.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
114]
gi|109453915|gb|ABG30120.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
114]
Length = 153
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
L+ Y I G K GD + PEG Y I + NPNS + LS+ I +PN D A +
Sbjct: 41 LRSYDIHLGFAPVGHKQFEGDGKTPEGLYRI--DRRNPNSDFHLSLGISYPNVNDYAAAK 98
Query: 137 T-----GADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRD 169
G D+ IHG+ + + GC A+ N +++EIYA+V++
Sbjct: 99 AVGKSPGGDIFIHGQKSPFRKDEPDWTWGCIAVTNPEIEEIYAMVQN 145
>gi|262281096|ref|ZP_06058878.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257327|gb|EEY76063.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus
RUH2202]
Length = 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+T P T I +FKN+ IL + K N D +++ Y I G K D + PEG
Sbjct: 35 KTKPI--TSIEVFKNQRIL-LLKSNQD----VIRRYPIRLGFNPEGHKHFENDGKTPEGV 87
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFD----KAHNR-TGADLMIHGECASA--------- 150
Y I W N S Y+ S++I +P+ D K HN+ TG D+MIHG +
Sbjct: 88 YSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSVPKSLISMPFSST 145
Query: 151 ---------GCYAMNNKQMQEIYAIV 167
GC A+ N + EI+ V
Sbjct: 146 YMPHKDWTLGCIAVRNADIDEIWQFV 171
>gi|254452444|ref|ZP_05065881.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
gi|198266850|gb|EDY91120.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
Length = 162
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
+L++Y G K GD + PEG Y+I + NPNS ++LSI I +PN D+A
Sbjct: 50 VLEQYDFELGFAPTGHKEVEGDGRTPEGAYFI--DRKNPNSSFYLSIGISYPNAADRARA 107
Query: 135 ----NRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
G D+ IHG +AGC A+ +++M++IYA+V
Sbjct: 108 RAMGKSPGGDIFIHGTPRASLNRDDWTAGCLAVKDREMEDIYAMV 152
>gi|93005670|ref|YP_580107.1| hypothetical protein Pcryo_0840 [Psychrobacter cryohalolentis K5]
gi|92393348|gb|ABE74623.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5]
Length = 187
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++K Y I G K + GD++ P G Y + + N SK++ SI++ +PN DKA
Sbjct: 69 VIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYK--NEKSKFYRSIHVSYPNAADKARA 126
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
++ G D+MIHG+ + GC A+ + +M EI A V
Sbjct: 127 KSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGCIAVTDNEMDEIMAAVE 178
>gi|254505691|ref|ZP_05117837.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
gi|219551344|gb|EED28323.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
Length = 159
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY++ G K + GD++ PEG YY+ + + +S+Y+ SI+I +PN D+ +
Sbjct: 41 VVREYRVALGQSPKGHKRQEGDQKTPEGRYYLDF--VIEDSQYYKSIHISYPNLRDRTYA 98
Query: 136 RT-----GADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
R G D+ IH GE A GC A+ N++M E+ ++V
Sbjct: 99 RVHNLDPGGDIKIHGLKNGERRPANYVQSFDWTDGCIAITNQEMDELLSLV 149
>gi|218672529|ref|ZP_03522198.1| hypothetical protein RetlG_13267 [Rhizobium etli GR56]
Length = 179
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + + + + Y+I + GPK GDE+ PEG Y I W
Sbjct: 42 LIRVYKSERRMVLLRADAP-----IATYRISLGRAADAGPKQREGDEKTPEGRYEIDWR- 95
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGC 152
NP S LS++I +P ++ + G ++MIHG + GC
Sbjct: 96 -NPKSMAHLSLHISYPKPEEQRAAQVNGFPPGGNIMIHGLPNGWGLLGDVHRLLDWTDGC 154
Query: 153 YAMNNKQMQEIYAIVRD 169
A+ N +M++I+A V D
Sbjct: 155 IAVTNAEMRDIWARVPD 171
>gi|149377346|ref|ZP_01895091.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893]
gi|149358358|gb|EDM46835.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893]
Length = 187
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 21/113 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++ Y+I G K+ GD++ PEG Y + W N NS ++ SI+I +PN D+
Sbjct: 69 VVRSYRIGLGDNPSGHKLYEGDKRTPEGKYVLDWR--NSNSDFYKSIHISYPNAEDREQA 126
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRD 169
G +MIHG A GC A++N++M EI+ +V D
Sbjct: 127 SAWGLDPGGSIMIHGLPNEAGDMAFAFLGLDWTDGCIAVSNEEMDEIWQLVAD 179
>gi|117920863|ref|YP_870055.1| hypothetical protein Shewana3_2420 [Shewanella sp. ANA-3]
gi|117613195|gb|ABK48649.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 186
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K+ GD++ P+G Y + + +S Y+ SI+I +PNE DK
Sbjct: 68 ILKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRA 125
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ V
Sbjct: 126 KALGIRPGGMIMIHGQNPRSPLTPEQAQQYNWTDGCIAITNAEMDEVWKAV 176
>gi|163751492|ref|ZP_02158715.1| hypothetical protein KT99_14104 [Shewanella benthica KT99]
gi|161328613|gb|EDP99763.1| hypothetical protein KT99_14104 [Shewanella benthica KT99]
Length = 127
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+ Y I G K++ GD++ PEG Y + + +S Y+ +I+I +PNE D+
Sbjct: 9 VLRRYHIALGDRPLGHKLQEGDQRTPEGRYTLDYK--KSDSAYYRAIHISYPNEEDQLRA 66
Query: 136 RT-----GADLMIHGE-------CASA-------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ A A GC A+ N QM E++ +
Sbjct: 67 RALGIQPGGQIMIHGQNPRSSLSAAEAQQYNWTDGCIAITNPQMDELWRAI 117
>gi|113970547|ref|YP_734340.1| hypothetical protein Shewmr4_2210 [Shewanella sp. MR-4]
gi|113885231|gb|ABI39283.1| conserved hypothetical protein [Shewanella sp. MR-4]
Length = 171
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K+ GD++ P+G Y + + +S Y+ SI+I +PNE DK
Sbjct: 53 ILKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRA 110
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ V
Sbjct: 111 KALGIRPGGMIMIHGQNPRSPLSPEQAQQYNWTDGCIAITNAEMDEVWKAV 161
>gi|114047782|ref|YP_738332.1| hypothetical protein Shewmr7_2287 [Shewanella sp. MR-7]
gi|113889224|gb|ABI43275.1| conserved hypothetical protein [Shewanella sp. MR-7]
Length = 171
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K+ GD++ P+G Y + + +S Y+ SI+I +PNE DK
Sbjct: 53 ILKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRA 110
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ V
Sbjct: 111 KALGIRPGGMIMIHGQNPRSPLSPEQAQQYNWTDGCIAITNAEMDEVWKAV 161
>gi|310780465|ref|YP_003968797.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
gi|309749788|gb|ADO84449.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
Length = 164
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++K Y I G K ++GD + PEG Y + + N S Y+ SI+I +PNE DKA
Sbjct: 51 VIKIYDISLGIDPIGHKGKSGDNKTPEGIYTLDYKN--SQSIYYKSIHISYPNEKDKAAA 108
Query: 136 RT-----GADLMIHGECASA--------GCYAMNNKQMQEIYAIVR 168
G D+ IHG+ + GC + N++M EI+ +++
Sbjct: 109 AQKGWDPGGDITIHGQKKGSLSKEEWTEGCIGVTNEEMDEIWELLQ 154
>gi|229592409|ref|YP_002874528.1| hypothetical protein PFLU5023 [Pseudomonas fluorescens SBW25]
gi|229364275|emb|CAY52000.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 167
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR- 136
K Y+I G K+ GD + PEG Y+I W + ++ L+++I +PN D A R
Sbjct: 51 KTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWRKT--SERFNLAMHISYPNISDAARARR 108
Query: 137 ----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
G+ +MIHG + GC M N M+E++ +V+D
Sbjct: 109 EGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMREVWTLVKDG 160
>gi|24373740|ref|NP_717783.1| hypothetical protein SO_2183 [Shewanella oneidensis MR-1]
gi|24348116|gb|AAN55227.1|AE015660_7 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 171
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+LK+Y+I G K+ GD++ P+G Y + + +S Y+ SI+I +PNE DK
Sbjct: 53 VLKQYRIAMGDLPTGHKLTEGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRA 110
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ + GC A+ N +M E++ V
Sbjct: 111 KALGIRPGGMIMIHGQNPRSPLPPEQAQQYNWTDGCIAITNAEMDEVWKAV 161
>gi|78224670|ref|YP_386417.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
gi|78195925|gb|ABB33692.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
Length = 341
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
+LK Y+I GPK GD + PEG Y I + N +S+Y +++I +PNE D+
Sbjct: 222 AVLKTYRIALGGDPIGPKERQGDNKTPEGAYTI--DARNRDSRYHRALHISYPNERDRKR 279
Query: 135 NRT-----GADLMIHG--------ECASA------GCYAMNNKQMQEI 163
R G ++MIHG A A GC A+ +++++EI
Sbjct: 280 ARELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWTKGCIAVTDEEIEEI 327
>gi|310817141|ref|YP_003965105.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
gi|308755876|gb|ADO43805.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
Length = 142
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 15/85 (17%)
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN----EFDKAHNRT-GADLMIHGECA-- 148
GD + PEG Y + + NP S Y LS+ I +PN E+ K +NR+ G D+ IHG
Sbjct: 50 GDGKTPEGIYTM--DRRNPRSAYHLSVGISYPNLADREYAKQYNRSPGGDIFIHGTPQRF 107
Query: 149 ------SAGCYAMNNKQMQEIYAIV 167
+ GC A+ N +++EIY +V
Sbjct: 108 VGAGDWTVGCMAVTNAEVEEIYRLV 132
>gi|212634603|ref|YP_002311128.1| ErfK/YbiS/YcfS/YnhG protein [Shewanella piezotolerans WP3]
gi|212556087|gb|ACJ28541.1| ErfK/YbiS/YcfS/YnhG [Shewanella piezotolerans WP3]
Length = 137
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+E+ L + + E +LK Y+I G K+ GD++ PEG Y + +
Sbjct: 1 MVVVTKSESSLSLLR-----EGKVLKSYRIAMGDNPVGHKLTEGDQRTPEGRYLLDYK-- 53
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGECASA--------------GCY 153
+S Y+ SI+I +PN+ D+ G +MIHGE ++ GC
Sbjct: 54 KSDSAYYRSIHISYPNDEDRLRANALGIEPGGQIMIHGENPNSSLSPIEAQQYNWTDGCI 113
Query: 154 AMNNKQMQEIYAIV 167
A+ N +M E++ +
Sbjct: 114 AVTNAEMDELWRAI 127
>gi|99078481|ref|YP_611739.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040]
gi|99035619|gb|ABF62477.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040]
Length = 186
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + K+ L + + D E + + Y I + G K GDE+ PEG Y I W N
Sbjct: 49 ILVIKSTRALHLLR---DGETI--RSYDISLGAAPEGHKQSEGDERTPEGRYEIDWR--N 101
Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGECA--------------SAGCYA 154
PNS LS++I +PN A G ++MIHG + GC A
Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161
Query: 155 MNNKQMQEIYAIVRDS 170
+ N +M+EI+++V D
Sbjct: 162 VTNAEMREIWSLVPDG 177
>gi|170727112|ref|YP_001761138.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
gi|169812459|gb|ACA87043.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
Length = 179
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++++Y+I G K++ GD++ PEG Y + + +S Y+ +I+I +PN+ DK
Sbjct: 61 VMRQYRIAMGDRPKGHKLKEGDQRTPEGRYILDYK--KSDSAYYRAIHISYPNDEDKLRA 118
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
+ G +MIHG+ ++ GC A+ N+QM E++ +
Sbjct: 119 KALGISPGGQIMIHGQNPNSSLTPEEAQKFNWTDGCIAITNRQMDELWGSI 169
>gi|190895329|ref|YP_001985621.1| hypothetical protein RHECIAT_PA0000012 [Rhizobium etli CIAT 652]
gi|190699274|gb|ACE93358.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 173
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W N
Sbjct: 36 LIRVYKSERRMVLLKGDAP-----IAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWRN 90
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------SAGC 152
S LS++I +P ++ G ++MIHG + GC
Sbjct: 91 A--KSTEHLSLHISYPKPEEQRAAEVNGFPAGGNIMIHGLPNGWGLLGKAHRLWDWTDGC 148
Query: 153 YAMNNKQMQEIYAIVRD 169
A+ N +M++I+A V D
Sbjct: 149 IAVTNAEMRDIWARVPD 165
>gi|114562765|ref|YP_750278.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
400]
gi|114334058|gb|ABI71440.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
400]
Length = 167
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +L ++ + T+ V+ K+E+ L + + + ++K Y I G K+
Sbjct: 14 SPSLAVASSSQTTAKVDLVVVN--KSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKL 66
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGECA 148
+ GD++ P+G Y + + +S ++ SI+I +PNE DK R G +MIHGE
Sbjct: 67 KEGDQRTPQGRYVLDYK--KSDSAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENP 124
Query: 149 SA--------------GCYAMNNKQMQEIYAIV 167
+ GC A+ NK+M E++ ++
Sbjct: 125 RSTLPPEEAQKYNWTNGCIAVTNKEMDELWQMI 157
>gi|319957168|ref|YP_004168431.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
16511]
gi|319419572|gb|ADV46682.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
16511]
Length = 182
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 37/188 (19%)
Query: 1 MTNRYNILLFAL--FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
MT R +LLFA IF G +++ + + +S+ KK + P V+ I K
Sbjct: 1 MTLRL-LLLFAFGSLIFAAGPSAFKAVSETVQS-------LSVSKKPSIPKAQKVL-IIK 51
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
+E L + + +EY I GPK D++ PEG Y + + +S Y
Sbjct: 52 SERKLYLLRNGKP-----YREYHIALGKHPVGPKRREHDQKTPEGNYTLDFKKA--DSSY 104
Query: 119 FLSINIGFPNEFDKAHNR-----TGADLMIHGECA--------------SAGCYAMNNKQ 159
+ +I++ +PN DKA + G +MIHG+ +AGC A++N
Sbjct: 105 YRAIHVSYPNSTDKARAKRLGVNPGGAIMIHGQPNWFGWLSIIRQRFYWTAGCIAVSNGD 164
Query: 160 MQEIYAIV 167
M EI+ V
Sbjct: 165 MDEIWQAV 172
>gi|116255215|ref|YP_771048.1| hypothetical protein pRL110015 [Rhizobium leguminosarum bv. viciae
3841]
gi|115259863|emb|CAK02957.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 165
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 27/135 (20%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+IR++K E + + K + + Y+I + GPK GDE+ PEG Y I W
Sbjct: 28 LIRVYKAERRMILLKGDTP-----ISTYRISLGQAADEGPKQREGDEKTPEGRYEIDWR- 81
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGC 152
NP S LS++I +P D+ + G ++MIHG + GC
Sbjct: 82 -NPKSMAHLSLHISYPGSDDRRNADAGGFPPGGNIMIHGLPNGWGLFGNAHQLWDWTDGC 140
Query: 153 YAMNNKQMQEIYAIV 167
A+ N +M++I+A V
Sbjct: 141 IAVTNSEMRDIWARV 155
>gi|312962870|ref|ZP_07777357.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6]
gi|311282897|gb|EFQ61491.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6]
Length = 167
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR- 136
K Y+I G K+ GD + PEG Y+I W + ++ L+++I +PN D A R
Sbjct: 51 KTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWRKT--SDRFNLAMHISYPNISDAARARR 108
Query: 137 ----TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
G+ +MIHG + GC M N M+E++ +V+D
Sbjct: 109 EGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMREVWNLVKDG 160
>gi|119945545|ref|YP_943225.1| hypothetical protein Ping_1849 [Psychromonas ingrahamii 37]
gi|119864149|gb|ABM03626.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 166
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 21/115 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--- 131
V+ +EY I G K + GD++ PEG Y I + NP S+++LS++I +P+E D
Sbjct: 47 VVYREYPIALGYRPIGHKGKEGDKRTPEGRYIIDYR--NPESRFYLSLHINYPSEKDLQS 104
Query: 132 KAHNRT--GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDS 170
A N G ++ IHG+ + GC A+ N+ +++ + +V+D
Sbjct: 105 AADNNVSPGGEIFIHGQPNNTKHHPSKFRGRDWTDGCIAITNQDIKQFWTLVKDG 159
>gi|255066178|ref|ZP_05318033.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256]
gi|255049723|gb|EET45187.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256]
Length = 194
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 38/164 (23%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S+ + +E PL EN +I + + K++ + + ++ LLK Y I
Sbjct: 41 SVAEPSETPLPENAVIDR------------LVVHKSKRTMSAY-----SQGKLLKTYPIA 83
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH-----NRTG 138
G K GD + PEG Y I N+ NPNS Y ++ + +PNE DKA+ G
Sbjct: 84 LGKQPVGHKHFEGDGKTPEGKYRI--NDRNPNSAYHKNLGVSYPNEADKAYAAAQGKSPG 141
Query: 139 ADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168
+ IHG + GC A+ ++++ E+Y V+
Sbjct: 142 GLIKIHGIKNGWGSIGKRHLQRDWTDGCIAVTDEEIDELYRSVK 185
>gi|259415196|ref|ZP_05739118.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B]
gi|259349106|gb|EEW60860.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B]
Length = 186
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
++ Y I + G K GDE+ PEG Y I W NPNS LS++I +PN D+A +
Sbjct: 67 IRSYDISLGAAPEGHKQSEGDERTPEGRYKIDWR--NPNSVAHLSLHISYPNAADQAAAK 124
Query: 137 T-----GADLMIHG--------------ECASAGCYAMNNKQMQEIYAIV 167
G ++MIHG + GC A+ N +M+EI+++V
Sbjct: 125 AAARDPGGNIMIHGLPNGWGALGALHLMRDWTDGCIAVTNAEMREIWSLV 174
>gi|157374959|ref|YP_001473559.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
gi|157317333|gb|ABV36431.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
Length = 179
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
L++Y+I G K+ GD++ PEG Y + + +S Y+ +I+I +PNE D +
Sbjct: 62 LRKYRIAMGDRPVGHKVTEGDQRTPEGRYLLDYK--KSDSAYYRAIHISYPNEEDSLRAK 119
Query: 137 T-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
G +MIHG+ ++ GC A+ N QM E++ +
Sbjct: 120 ALGLDPGGQIMIHGQNPNSSLSPEEAQRFNWTDGCIAITNAQMDELWRAI 169
>gi|326389097|ref|ZP_08210679.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
gi|326206697|gb|EGD57532.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
Length = 174
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 20/118 (16%)
Query: 70 VDAEYVLLKEYK--ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+DAE ++ Y W GPK GD + PEG Y I W +S Y LS++I +P
Sbjct: 53 LDAEGGAVRVYDHIRLGWE-PVGPKRFEGDGRTPEGHYRIDWG--LESSAYHLSLHISYP 109
Query: 128 NEFDKAHNRT-----GADLMIHG----------ECASAGCYAMNNKQMQEIYAIVRDS 170
D+A+ R+ G + IHG +AGC A++N +++EI+ +V D
Sbjct: 110 GPSDQAYARSRGRSPGGAIFIHGWPNGARDAPEGDWTAGCIALDNAEIEEIWGLVGDG 167
>gi|119382801|ref|YP_913857.1| hypothetical protein Pden_0044 [Paracoccus denitrificans PD1222]
gi|119372568|gb|ABL68161.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 188
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 76 LLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
+LK Y+I S G K GDE+ PEG Y I W NP S LS+++ +PN D
Sbjct: 65 ILKTYRIAMGSNWNQGHKQREGDERTPEGTYRIDWR--NPRSIAHLSLHVSYPNAEDSER 122
Query: 135 NR-----TGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIV 167
R G ++MIHG + GC A+ N +M+EI+++
Sbjct: 123 ARQAGYSPGGNIMIHGLPNGWGAMGRLHRLLDWTDGCIAVTNDEMREIWSLT 174
>gi|157961382|ref|YP_001501416.1| hypothetical protein Spea_1556 [Shewanella pealeana ATCC 700345]
gi|157846382|gb|ABV86881.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
Length = 171
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+E + I ++ +LK+Y+I G K+ GD++ PEG Y + +
Sbjct: 35 LVVVTKSEASMAILRQGK-----VLKKYRIAMGDNPVGHKLTEGDQRTPEGRYILDYK-- 87
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECASA--------------GCY 153
+S Y+ +I+I +PN+ DK G +MIHGE ++ GC
Sbjct: 88 KSDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTPEEAQMYNWTDGCI 147
Query: 154 AMNNKQMQEIYAIV 167
A+ N +M E++ +
Sbjct: 148 AITNAEMDELWRAI 161
>gi|149909260|ref|ZP_01897917.1| lipoprotein, putative [Moritella sp. PE36]
gi|149807784|gb|EDM67730.1| lipoprotein, putative [Moritella sp. PE36]
Length = 162
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 25/151 (16%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+I+S+ + + + K++ L +++ N L+K Y+I G K + G
Sbjct: 11 VILSLNSYASQLLQADYVLVKKSDRTLFLFRNNQ-----LIKSYRISLGKNPIGAKTQRG 65
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIH------- 144
D++ PEG Y I + N SKY LS++I +PN+ DK + G + IH
Sbjct: 66 DKKTPEGLYNIDFKNR--QSKYHLSLHITYPNKRDKERSFERNLNPGDSIYIHGLPNKNK 123
Query: 145 ------GECASAGCYAMNNKQMQEIYAIVRD 169
G + GC A++N +++I V D
Sbjct: 124 NAGLLIGSDWTNGCIAVSNNAIRDIAKYVPD 154
>gi|311696719|gb|ADP99592.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15]
Length = 187
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 22/117 (18%)
Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129
+D E V+ + Y+I G K+ GDE+ PEG Y + W N S ++ SI+I +P+E
Sbjct: 64 MDGEDVV-RSYRISLGDNPEGHKLYEGDERTPEGDYTLDWRNA--ESDFYKSIHISYPSE 120
Query: 130 FDKAHNRT-----GADLMIH------GECASA--------GCYAMNNKQMQEIYAIV 167
D+ G +MIH G+ A A GC A+ N++M EI+ +V
Sbjct: 121 RDRELASAWGLDPGGSIMIHGLPNNVGDMAFAYTGLDWTDGCIAVTNEEMDEIWQLV 177
>gi|120553064|ref|YP_957415.1| hypothetical protein Maqu_0121 [Marinobacter aquaeolei VT8]
gi|120322913|gb|ABM17228.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 185
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
+++Y+I G K+ GDE+ PEG Y + W N +S ++ SI+I +P+ D+
Sbjct: 68 VRQYRISLGDNPVGHKLYEGDERTPEGDYVLDWRNA--SSDFYKSIHISYPSPRDRELAE 125
Query: 137 T-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVRDS 170
G +MIHG +A GC A++N+ M EI+ +V++
Sbjct: 126 AWGLDPGGSIMIHGLPNNAGDMAFAYTGLDWTNGCIAVSNEAMDEIWQLVQNG 178
>gi|87200697|ref|YP_497954.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
gi|87136378|gb|ABD27120.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
Length = 167
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 70 VDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+DA+ L+ + I G K GDE+ PEG Y I ++ N S Y LS++I +P+
Sbjct: 45 LDADGATLRSFSNIQLGDAPLGHKRFEGDERTPEGRYVI--DHGNARSAYHLSLHISYPD 102
Query: 129 EFDKAHNRT-----GADLMIHGECAS-----------AGCYAMNNKQMQEIYAIVRD 169
D+A+ G + IHG+ S GC A++N ++ EI+A+V D
Sbjct: 103 ASDRAYAEARGRSPGGQIFIHGQPNSLASGRIEGDWTDGCIALSNAEIDEIWALVGD 159
>gi|127512419|ref|YP_001093616.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
gi|126637714|gb|ABO23357.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
Length = 194
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+ YKI G K++ GD++ PEG Y + + +S Y+ +I+I +PN+ DK
Sbjct: 76 VLRRYKIALGDRPVGHKLQEGDQRTPEGRYILDYKKA--DSAYYRAIHISYPNDEDKLRA 133
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
G +MIHG+ ++ GC A+ N+++ E++ V
Sbjct: 134 AALGINPGGQIMIHGQNPNSSLTPDEAQRLNWTDGCIAIKNEEIDELWRAV 184
>gi|213418318|ref|ZP_03351384.1| hypothetical protein Salmonentericaenterica_10609 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 76
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K
Sbjct: 4 YPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSK 55
>gi|222055904|ref|YP_002538266.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221565193|gb|ACM21165.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 174
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
LK Y++ G K E GD + PEG Y I + +S+Y +++I +P+ D A +
Sbjct: 57 LKTYEVALGRNPQGKKTEEGDCRTPEGIYTI--DRRKQSSRYHRALHISYPSSADVAQAK 114
Query: 137 T-----GADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVRDSL 171
G D+MIHG + GC A+ N ++EI+ +V D +
Sbjct: 115 ARSVSPGGDVMIHGLPNALGFVGKVHLIRDWTLGCVAVTNPDIEEIWRVVPDGV 168
>gi|189499065|ref|YP_001958535.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides
BS1]
gi|189494506|gb|ACE03054.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides
BS1]
Length = 192
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +L ++ +K Y+I G K+ GD + PEG Y I + NP S
Sbjct: 61 KGERLLHLYSGGA-----AVKSYRIALGFNPVGAKLRQGDGKTPEGRYSI--SERNPQSS 113
Query: 118 YFLSINIGFPNEFD-----KAHNRTGADLMIHGECAS--------------AGCYAMNNK 158
Y LS+ I +P+ D KA G D+ IHG S GC A+ N
Sbjct: 114 YHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGCIAVTND 173
Query: 159 QMQEIYAIV 167
+++E++ V
Sbjct: 174 EIEELWKAV 182
>gi|299768812|ref|YP_003730838.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1]
gi|298698900|gb|ADI89465.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1]
Length = 193
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+T P T I +FK++ IL + K N D +++ Y I G K D + PEG
Sbjct: 47 KTKPV--TSIEVFKSQRIL-LLKSNQD----VIRRYPIRLGLNPKGHKHFENDGKTPEGI 99
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFD----KAHNR-TGADLMIHGECASA--------- 150
Y I W N S ++ S++I +P+ D K HN+ TG D+MIHG +
Sbjct: 100 YSIDWR--NSQSVFYKSLHISYPDMKDIAYAKQHNQPTGGDIMIHGSVPKSFLSMPFSST 157
Query: 151 ---------GCYAMNNKQMQEIYAIV 167
GC A+ N + EI+ V
Sbjct: 158 YMPHKDWTLGCIAVRNTDIDEIWQFV 183
>gi|91793728|ref|YP_563379.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
gi|91715730|gb|ABE55656.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
Length = 181
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
+K Y I G K++ GD++ P+G Y++ + +S ++ SI+I +PNE DK
Sbjct: 64 IKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDYK--KSDSAFYKSIHISYPNEEDKLRAD 121
Query: 137 T-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
G +MIHGE + GC A+ NK+M E++ ++
Sbjct: 122 ALGISPGGMIMIHGENPKSTLPPEEAQKYNWTNGCIAVTNKEMDELWRMI 171
>gi|114762228|ref|ZP_01441696.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis
HTCC2601]
gi|114545252|gb|EAU48255.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601]
Length = 133
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--- 132
+LK Y I G K GD + PEG Y+I + NPNS + LS+ I +PN D+
Sbjct: 9 VLKSYDIGLGFQPQGHKQFEGDGKTPEGLYFI--DRRNPNSSFHLSLGISYPNPNDRAFA 66
Query: 133 --AHNRTGADLMIHGECA--------------------SAGCYAMNNKQMQEIYAIVR 168
A G D+ IHG + GC A+++ Q++ IYA+V+
Sbjct: 67 AAAGKSPGGDIFIHGGPPKDRKRLGGGDWMTKGNSVDWTWGCIAVSDDQIEHIYAMVK 124
>gi|305432036|ref|ZP_07401203.1| conserved hypothetical secreted protein [Campylobacter coli JV20]
gi|304445120|gb|EFM37766.1| conserved hypothetical secreted protein [Campylobacter coli JV20]
Length = 325
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKQVEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N+ ++E +V+D
Sbjct: 157 HGYPLDGTRLDEFKTRGCIALFNENLEEFAKVVQD 191
>gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
RM3195]
gi|57016903|gb|EAL53685.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
RM3195]
Length = 316
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K + GD + P GFY +G NP +Y+ + +PN DK ++TG + I
Sbjct: 89 TGLMGDKEKEGDLKTPVGFYELGMK-FNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWI 147
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIV 167
HG E + GC A+ N ++++ IV
Sbjct: 148 HGYPLDGTRLDEFKTRGCIALFNDKLEDFAKIV 180
>gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228]
gi|57019237|gb|EAL55943.1| conserved hypothetical secreted protein [Campylobacter coli RM2228]
Length = 325
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKQVEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N+ ++E +V+D
Sbjct: 157 HGYPLDGTRLDEFKTRGCIALFNENLEEFAKVVQD 191
>gi|323499297|ref|ZP_08104274.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326]
gi|323315685|gb|EGA68719.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326]
Length = 159
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K + GD++ PEG YY+ + LN +S+++ SI+I +PN D+
Sbjct: 41 VVREYRIALGKSPKGHKQQEGDQKTPEGRYYLDF-VLN-DSQFYRSIHISYPNLKDRTQA 98
Query: 136 RT-----GADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
+ G D+ IH GE A GC A+ N++M ++ ++V
Sbjct: 99 MSNKVDPGGDIKIHGLKNGETRPANYVQSFDWTDGCIALTNQEMDDLLSLV 149
>gi|126665583|ref|ZP_01736565.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17]
gi|126630211|gb|EBA00827.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17]
Length = 187
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 29/141 (20%)
Query: 51 PTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P++ ++ K E L++ + E V+ ++Y+I G K+ GD + PEG Y +
Sbjct: 46 PSITKVLVQKGERSLQL----LSGEQVI-RQYRISLGDNPLGHKLYEGDSRTPEGEYSLD 100
Query: 109 WNNLNPNSKYFLSINIGFPNEFDK--AHN---RTGADLMIHG-------ECASA------ 150
W N S ++ SI+I +P+ D+ A N G +MIHG + A A
Sbjct: 101 WRNA--GSSFYKSIHISYPSAKDREMAENWGLNPGGSIMIHGLPNGTDDDFAFAFFGLDW 158
Query: 151 --GCYAMNNKQMQEIYAIVRD 169
GC A++N+++ EI+ +V D
Sbjct: 159 TDGCIAVSNQEIDEIWQLVSD 179
>gi|167623553|ref|YP_001673847.1| hypothetical protein Shal_1622 [Shewanella halifaxensis HAW-EB4]
gi|167353575|gb|ABZ76188.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 169
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+ K+Y+I G K+ GD++ PEG Y + + +S Y+ +I+I +PN+ D+
Sbjct: 51 VFKKYRIAMGDNPVGHKLTEGDQRTPEGRYLLDYK--KSDSAYYRAIHISYPNDEDRLRA 108
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
G +MIHGE ++ GC A+ N +M E++ +
Sbjct: 109 DALGISPGGQIMIHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAI 159
>gi|260777335|ref|ZP_05886229.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607001|gb|EEX33275.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 154
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++KE++I G K + GD + PEG YY+ + + NS+++ SI+I +PN D A+
Sbjct: 36 VVKEFRIALGKHPKGHKTQEGDHRTPEGRYYLDF--VIDNSEFYRSIHISYPNPRDIAYA 93
Query: 136 RT-----GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
G D+ IH GE A GC A+ N++M E+ +V+
Sbjct: 94 AKLRVDPGGDIKIHGLRNGEKRPAKFVQSFDWTNGCIAITNEEMDELLTLVK 145
>gi|119383401|ref|YP_914457.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
gi|119373168|gb|ABL68761.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
Length = 209
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIH 144
G K GD + PEG + I + LN S Y LS+ I +P + + R G D+MIH
Sbjct: 107 GDKSREGDGRTPEGIFRI--DRLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIH 164
Query: 145 GEC------------ASAGCYAMNNKQMQEIYAIVR 168
G+ +AGC A++N +++EI+A R
Sbjct: 165 GQPNQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHAR 200
>gi|294140531|ref|YP_003556509.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
gi|293327000|dbj|BAJ01731.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
Length = 185
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L+ Y I G K + GD++ PEG Y + + +S Y+ +I+I +PNE D+
Sbjct: 67 VLRRYHIALGDRPRGHKTQEGDQRTPEGRYTLDYKKF--DSAYYRAIHISYPNEEDRLRA 124
Query: 136 -----RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
+ G +MIHG+ + GC A+ N QM E++ +
Sbjct: 125 SALGIQPGGQIMIHGQNPRSSLSAEEAQKYNWTDGCIAITNPQMDELWRAI 175
>gi|119775248|ref|YP_927988.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
gi|119767748|gb|ABM00319.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
Length = 165
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+K Y+I G K++ GD++ P+G Y + + +S Y+ SI+I +PN+ D
Sbjct: 47 LIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDFKKA--DSAYYRSIHISYPNDEDILRA 104
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
+ G +MIHG+ + GC A+ N+ M E++ ++
Sbjct: 105 KALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLI 155
>gi|239831254|ref|ZP_04679583.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG
3301]
gi|239823521|gb|EEQ95089.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG
3301]
Length = 224
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 22/108 (20%)
Query: 80 YKICAWS-GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK-----A 133
Y+I S G G K GDE+ PEG Y I W NP S LS++I +PNE DK A
Sbjct: 109 YRISLGSNGDGGHKQREGDEKTPEGHYVIDWR--NPRSMAHLSLHISYPNENDKQAAAAA 166
Query: 134 HNRTGADLMIHG--------ECA------SAGCYAMNNKQMQEIYAIV 167
+ G ++MIHG + A + GC A+ + +M++I+A V
Sbjct: 167 GHAPGGNIMIHGLPNGWGWLKSAHRLWDWTDGCIAVTDAEMRDIWARV 214
>gi|315638692|ref|ZP_07893866.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
JV21]
gi|315481316|gb|EFU71946.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
JV21]
Length = 323
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 23/120 (19%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K + GD + P GFY +G +P +Y+ + +PN DK ++TG + I
Sbjct: 96 TGLMGDKEKEGDLKTPVGFYELGMK-FSPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWI 154
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIV-----------RDSLRGNMQSHIQIQA 183
HG E + GC A+ N ++++ +V +DS+R + + A
Sbjct: 155 HGYPLDGTRLDEFKTRGCIALFNDKLEDFAKVVAGKKVYVLTEEKDSVRAKKEEIASLMA 214
>gi|283954467|ref|ZP_06371987.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794084|gb|EFC32833.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp.
jejuni 414]
Length = 325
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGNKKTEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ IV+D
Sbjct: 157 HGYPLDGSRIDEFKTRGCIALFNNNLEKFAQIVQD 191
>gi|329906069|ref|ZP_08274352.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547344|gb|EGF32175.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium
IMCC9480]
Length = 416
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 68 RNVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYI----GWNNLNPNSKYFLSI 122
+N + LL +Y I G G K+ GD++ P G YYI G N L P+ ++
Sbjct: 169 QNTRGQLKLLSDYYIT--QGKLGSNKLTEGDQKTPVGVYYITGRLGRNRL-PDFYGAGAL 225
Query: 123 NIGFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIV 167
I +PNE+D+ R+G+ + +HG AS GC + N +++++ V
Sbjct: 226 PINYPNEWDRMKGRSGSGIWLHGTPSTSYSRPPLASDGCVVLTNPDLEKLFRSV 279
>gi|225024431|ref|ZP_03713623.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC
23834]
gi|224942812|gb|EEG24021.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC
23834]
Length = 200
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
DA+ LLK Y I G K GD + PEG Y I N+ NP+S + ++ I +PN
Sbjct: 77 DAQGNLLKTYPIALGFSPVGHKQFEGDGKTPEGRYTI--NDRNPHSSHHKNLGISYPNAA 134
Query: 131 DKAHNRT-----GADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168
D+ H G D+ IHG + GC A+ + ++ E+Y V+
Sbjct: 135 DRTHASAQGKNPGGDIKIHGLRNGLGLIGAQHLRRDWTHGCIAVTDGEIDELYIHVK 191
>gi|152982143|ref|YP_001352557.1| hypothetical protein mma_0867 [Janthinobacterium sp. Marseille]
gi|151282220|gb|ABR90630.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 393
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+SL ++ + + I+ M++ + + V+ + + L +++R V+ ++ L +Y I
Sbjct: 104 KSLRERPDPDMVPRAILQMREDQKN-----VLLVDAKRSRLYVYQR-VNGQFKLTSDYYI 157
Query: 83 CAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKYFL---SINIGFPNEFDKAHNRTG 138
G G K + GD++ P G YYI F ++ I +PNE+DKA+ R+G
Sbjct: 158 S--QGRLGVNKFKEGDQKTPLGVYYITARLPGARLPEFYGPGALPINYPNEWDKANGRSG 215
Query: 139 ADLMIHGE---------CASAGCYAMNNKQMQEIYAIV 167
+ + +HG +S GC + N ++E+ A V
Sbjct: 216 SGIWLHGTPSDSYSRPPLSSDGCVVLTNPDLKELSASV 253
>gi|262275516|ref|ZP_06053326.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886]
gi|262220761|gb|EEY72076.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
++K Y I + G K+ GD++ PEG Y + + +N S+++ SI I +PNE D
Sbjct: 21 IVKRYHISLGANPKGHKLREGDQRTPEGHYLLDF--INEKSRFYRSIRINYPNENDVKRA 78
Query: 132 -KAHNRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
K G +MIHG+ + GC A+ N+++ E +V+
Sbjct: 79 QKLGVNPGGQIMIHGQKNNNDSLPGSGRSKDWTDGCIAITNEEIDEFLRLVK 130
>gi|227821108|ref|YP_002825078.1| lipoprotein, putative [Sinorhizobium fredii NGR234]
gi|227340107|gb|ACP24325.1| lipoprotein, putative [Sinorhizobium fredii NGR234]
Length = 200
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LL+E+ I G K++ GD + PEG Y + W N S ++ S+++ +P D
Sbjct: 82 LLREFPIALGGNPVGDKLQEGDRRTPEGLYVLDWR--NDASSFYRSMHVSYPAPEDVQAA 139
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIV 167
G +MIHG+ + GC A+ N +M EI+ +V
Sbjct: 140 AAKVVDPGGMIMIHGQPNYLGWLAFLTQMFDWTDGCIAVTNAEMDEIWDMV 190
>gi|147672199|ref|YP_001215949.1| hypothetical protein VC0395_1113 [Vibrio cholerae O395]
gi|262167801|ref|ZP_06035502.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27]
gi|146314582|gb|ABQ19122.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014791|gb|ACP11000.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262023709|gb|EEY42409.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27]
Length = 160
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
H R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 100 HLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|261379335|ref|ZP_05983908.1| putative lipoprotein [Neisseria subflava NJ9703]
gi|284797774|gb|EFC53121.1| putative lipoprotein [Neisseria subflava NJ9703]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 28/158 (17%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA--EYVLLKEYKICAWSGTF 89
P+ ++ + P + + R+ +++ KR + A + LLK Y I
Sbjct: 27 PIRSTTTVATPSEAALPENAVIDRLVVHKS-----KRTMSAYSQGRLLKTYPISLGKQPV 81
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH-----NRTGADLMIH 144
G K GD + PEG Y I N NPNS Y ++ + +PNE DKA+ G + IH
Sbjct: 82 GHKQFEGDGKTPEGKYRI--NERNPNSGYHKNLGVSYPNEADKAYAAAQGKSPGGLIKIH 139
Query: 145 G--------------ECASAGCYAMNNKQMQEIYAIVR 168
G + + GC A+ ++++ E+Y V+
Sbjct: 140 GMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYRSVK 177
>gi|149188458|ref|ZP_01866751.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1]
gi|148837676|gb|EDL54620.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1]
Length = 167
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
+++EY+I G KI+ GD + PEG YY+ + + +S ++ S++I +PN DK
Sbjct: 48 TVIREYRIALGKNPRGHKIQEGDNRTPEGKYYLDF--VMDDSAFYRSMHISYPNLRDKNR 105
Query: 135 NRT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
++ G ++ IHG + GC A+ N +M E+ ++V+
Sbjct: 106 AKSLGVAPGGNIKIHGLKNNNTKPPQFVQSFDWTNGCIAITNDEMDELVSLVK 158
>gi|153838809|ref|ZP_01991476.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810]
gi|149747789|gb|EDM58683.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810]
Length = 148
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
++LKEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D +
Sbjct: 29 IILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--VIEDSAFYRSVHISYPDAIDTLE 86
Query: 133 AHNR---TGADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
AH R G ++ IH GE GC A+ N++M E +V
Sbjct: 87 AHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCIALTNEEMDEFIQLV 138
>gi|241760216|ref|ZP_04758312.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114]
gi|241319327|gb|EER55792.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114]
Length = 182
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
LLK Y I G K GD + PEG Y I N NPNS Y ++ + +PNE DKA+
Sbjct: 64 LLKTYPISLGKQPVGHKQFEGDGKTPEGKYRI--NERNPNSGYHKNLGVSYPNEADKAYA 121
Query: 135 ----NRTGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168
G + IHG + + GC A+ ++++ E+Y V+
Sbjct: 122 AAQGKSPGGLIKIHGMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYRSVK 173
>gi|117926285|ref|YP_866902.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1]
gi|117610041|gb|ABK45496.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1]
Length = 415
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 19/103 (18%)
Query: 76 LLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKY-----FLSINIGFPNE 129
L+ +Y I SG G KI+ GD++ P G YY+ P K ++ I +PNE
Sbjct: 176 LIADYYIS--SGKKGAEKIKQGDKRTPAGLYYV--TEYIPGEKLPDLYGAGAMPINYPNE 231
Query: 130 FDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEI 163
+D+ H RTG + +HG AS GC A+ N +E+
Sbjct: 232 WDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLDFEEL 274
>gi|57237735|ref|YP_178983.1| hypothetical protein CJE0985 [Campylobacter jejuni RM1221]
gi|57166539|gb|AAW35318.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|258624844|ref|ZP_05719772.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262173004|ref|ZP_06040681.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451]
gi|258582842|gb|EEW07663.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|261890362|gb|EEY36349.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451]
Length = 160
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K + GD++ PEG Y++ + + S ++ SI+I +PN+ D+ +
Sbjct: 42 VIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--VTQESHFYRSIHISYPNQQDEQYA 99
Query: 136 -----RTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
G D+ IH GE A GC A+ N +M E ++V
Sbjct: 100 ALLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCIALTNLEMDEFLSLV 150
>gi|152991674|ref|YP_001357395.1| hypothetical protein SUN_0078 [Sulfurovum sp. NBC37-1]
gi|151423535|dbj|BAF71038.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 196
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 47/201 (23%)
Query: 6 NILLFALF---IFLNGCHHSRS---------LIDKAEHPLSENLIISMQKKRTSPFHPTV 53
NI+L ++ +F++GC R+ I + LS + K
Sbjct: 4 NIVLLSILGTAVFISGCGEPRAYGKVDNTPYAIGECRQELSHGTDVDQGKLADK------ 57
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I ++K + L ++++ LL KI +G G KI+ GD + PEG Y+I
Sbjct: 58 IVVYKKKRKLSMYRQGK-----LLYACKISLGKNGDKGNKIQAGDYRTPEGSYWIVRKKC 112
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA----------------SAG 151
+P + + S+ I +PNE DKA R G + IHG+ + G
Sbjct: 113 DP--RLYKSLMISYPNEADKARARAHGAKPGGYITIHGQPKWNADGHADRYTLAHDWTEG 170
Query: 152 CYAMNNKQMQEIYAIVRDSLR 172
C A+ NK + ++ V++ ++
Sbjct: 171 CMAVPNKAIDTLWRSVKNGVK 191
>gi|86153307|ref|ZP_01071511.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612822|ref|YP_001000581.1| hypothetical protein CJJ81176_0915 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005512|ref|ZP_02271270.1| hypothetical protein Cjejjejuni_04735 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|85843033|gb|EAQ60244.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249350|gb|EAQ72310.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|315058346|gb|ADT72675.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|258622323|ref|ZP_05717349.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585647|gb|EEW10370.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 160
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K + GD++ PEG Y++ + + S ++ SI+I +PN+ D+ +
Sbjct: 42 VIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--VTQESHFYRSIHISYPNQQDERYA 99
Query: 136 -----RTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
G D+ IH GE A GC A+ N +M E ++V
Sbjct: 100 ALLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCIALTNLEMDEFLSLV 150
>gi|153214388|ref|ZP_01949359.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115337|gb|EAY34157.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 194
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
H R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 134 HLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|86150191|ref|ZP_01068418.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597483|ref|ZP_01100717.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562526|ref|YP_002344305.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85839307|gb|EAQ56569.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190075|gb|EAQ94050.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360232|emb|CAL35027.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284926140|gb|ADC28492.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315929852|gb|EFV09015.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
305]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAKVVQD 191
>gi|157415163|ref|YP_001482419.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni
81116]
gi|157386127|gb|ABV52442.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747806|gb|ADN91076.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
M1]
gi|315932612|gb|EFV11543.1| hypothetical protein CSU_0096 [Campylobacter jejuni subsp. jejuni
327]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|148926588|ref|ZP_01810270.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845282|gb|EDK22376.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAKVVQD 191
>gi|126664087|ref|ZP_01735081.1| protein ERFK [Flavobacteria bacterium BAL38]
gi|126624036|gb|EAZ94730.1| protein ERFK [Flavobacteria bacterium BAL38]
Length = 170
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+K Y I G K GD++ PEG Y I ++ NPNS + ++ I +PN+ D A
Sbjct: 52 LIKTYTISLGRNPVGAKEYEGDQKTPEGTYSI--HDKNPNSGWHKNLGISYPNQNDMAKA 109
Query: 136 R-----TGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIV 167
+ G ++ IHG + + GC A+ N ++ E+YA V
Sbjct: 110 KRLGKPAGGNIKIHGLKNGKGYIGKFHRWQDWTLGCIAVTNAEIDELYAAV 160
>gi|205356391|ref|ZP_03223156.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345776|gb|EDZ32414.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 311
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 84 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 142
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 143 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAKVVQD 177
>gi|315124402|ref|YP_004066406.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315018124|gb|ADT66217.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 303
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|153952096|ref|YP_001398022.1| hypothetical protein JJD26997_0906 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939542|gb|ABS44283.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 325
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|86152147|ref|ZP_01070359.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|85840932|gb|EAQ58182.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
Length = 325
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|283956251|ref|ZP_06373731.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791971|gb|EFC30760.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 325
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K GD + P GFY +G NP Y+ + +PN DK +TG + I
Sbjct: 98 TGLMGDKKIEGDLKTPVGFYELG-RKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWI 156
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A+ N +++ +V+D
Sbjct: 157 HGYPLDGSRLDEFKTRGCIALFNNNLEKFAQVVQD 191
>gi|262403345|ref|ZP_06079905.1| hypothetical protein VOA_001335 [Vibrio sp. RC586]
gi|262350844|gb|EEY99977.1| hypothetical protein VOA_001335 [Vibrio sp. RC586]
Length = 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 21/115 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y++ + + +S ++ SI+I +PN D+ A
Sbjct: 42 VIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--IIDDSSFYRSIHISYPNARDQQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVRDSL 171
R G D+ IHG E A + GC A+ N++M E ++V+ +
Sbjct: 100 QLRGVNPGGDIKIHGLKNSDEREPAFVQSFDWTNGCIAITNQEMDEFLSLVQPGI 154
>gi|117921827|ref|YP_871019.1| hypothetical protein Shewana3_3390 [Shewanella sp. ANA-3]
gi|117614159|gb|ABK49613.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 157
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 32/165 (19%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+I+SM + ++++ K+E+ + + +D E V+ KEY + + G K + G
Sbjct: 5 VILSMMISNLAFAEVDLVKVDKSESKMYL----LDGEQVI-KEYHVAFGANPKGHKQKEG 59
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--- 148
DE+ PEG Y + + +S ++ +++I +PN D+A+ + G +M+HG+
Sbjct: 60 DEKTPEGSYTLDYK--KEDSSFYRAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLG 117
Query: 149 -----------SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
+ GC A+ N +M E +V N+ + I+IQ
Sbjct: 118 WLSFITQRFNWTNGCIALTNSEMDEFMELV------NVGTKIEIQ 156
>gi|218510701|ref|ZP_03508579.1| hypothetical protein RetlB5_26713 [Rhizobium etli Brasil 5]
Length = 164
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKIC-AWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + + + + Y+I + GPK GDE+ PEG Y I W
Sbjct: 42 LIRVYKSERRMVLLRGDAP-----IATYQISLGGAADAGPKQREGDEKTPEGLYEIDWR- 95
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG 145
NP S LS++I +PN ++ G +MIHG
Sbjct: 96 -NPKSMAHLSLHISYPNPKEQRAAEANGFPPGGSIMIHG 133
>gi|153816794|ref|ZP_01969461.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227811790|ref|YP_002811800.1| hypothetical protein VCM66_A0162 [Vibrio cholerae M66-2]
gi|229506670|ref|ZP_04396179.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286]
gi|298500021|ref|ZP_07009827.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126512597|gb|EAZ75191.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227010932|gb|ACP07143.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229357021|gb|EEO21939.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286]
gi|297542002|gb|EFH78053.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 194
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
H R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 HLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|261212665|ref|ZP_05926949.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341]
gi|260837730|gb|EEX64407.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341]
Length = 119
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K + GD++ PEG YY+ + + +S ++ +I+I +P+ D+ H
Sbjct: 1 MVREYRIALGKSPKGHKQQEGDQRTPEGNYYLDF--ITQDSHFYRAIHISYPSPQDERHA 58
Query: 136 -----RTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
G D+ IH GE A GC A+ N +M + ++V+
Sbjct: 59 AQLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCIALTNSEMDDFLSLVQ 110
>gi|163852564|ref|YP_001640607.1| hypothetical protein Mext_3148 [Methylobacterium extorquens PA1]
gi|163664169|gb|ABY31536.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 182
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 42 QKKRTSPFHPTVIRIFKNENIL-EIWKRNVDAEYVLLKEYKICAW---SGTFGP---KIE 94
Q RT P P V + + + +L E R + LL+E ++ A S F P K
Sbjct: 29 QVGRTEP--PLVAQAERADRVLVEKAARRL----TLLREGRVLATYPISLGFAPEGHKAR 82
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG---- 145
GD + PEG Y + NP S LS+ + +P+ D A + G D+MIHG
Sbjct: 83 EGDGRTPEGVYTTAFR--NPRSVAHLSLKVSYPSPADAAAVQAGGYSPGGDIMIHGLMNG 140
Query: 146 ----------ECASAGCYAMNNKQMQEIYAIV 167
+ + GC + N +M+ IYA V
Sbjct: 141 FSWLGRLHRLKDWTQGCVGVTNAEMRAIYARV 172
>gi|302879533|ref|YP_003848097.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
gi|302582322|gb|ADL56333.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
Length = 387
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 15/91 (16%)
Query: 87 GTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKYFL----SINIGFPNEFDKAHNRTGADL 141
G G K+ TGD++ P G Y+I NL N + + + +PNE+DK +NRTG+ +
Sbjct: 159 GKLGTEKVSTGDQRTPLGVYFIQ-ANLPKNQLADMYGSGAFPLSYPNEWDKRNNRTGSGI 217
Query: 142 MIHGEC---------ASAGCYAMNNKQMQEI 163
+HG AS GC +NN + ++
Sbjct: 218 WLHGTSSDTYSRPPRASNGCVVLNNDDLNKL 248
>gi|118474716|ref|YP_892715.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
gi|118413942|gb|ABK82362.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
Length = 322
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K+ GD + P G Y I P Y+ ++ N+ +PN FDK +RTG + I
Sbjct: 96 TGLMGDKLLEGDLKTPVGVYEIT-RRFVPEDTYYGPVAFNLSYPNLFDKLRDRTGGGIWI 154
Query: 144 HG----------ECASAGCYAMNNKQMQEIYAIVRD 169
HG + GC M N + + +I++D
Sbjct: 155 HGFPLNGNIREDVYKTKGCVVMPNDLLLNLESILKD 190
>gi|260362135|ref|ZP_05775130.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
gi|260896320|ref|ZP_05904816.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
Peru-466]
gi|308094839|ref|ZP_05892934.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
AN-5034]
gi|308126143|ref|ZP_05908130.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
gi|308085138|gb|EFO34833.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
Peru-466]
gi|308091743|gb|EFO41438.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
AN-5034]
gi|308110411|gb|EFO47951.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
gi|308114649|gb|EFO52189.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
gi|328469985|gb|EGF40896.1| hypothetical protein VP10329_04277 [Vibrio parahaemolyticus 10329]
Length = 160
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
++LKEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D +
Sbjct: 41 IILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--VIEDSAFYRSVHISYPDAIDTLE 98
Query: 133 AHNRT---GADLMIH----GECA----------SAGCYAMNNKQMQEIYAIV 167
AH R G ++ IH GE + GC A+ N++M E +V
Sbjct: 99 AHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCIALTNEEMDEFIQLV 150
>gi|261250849|ref|ZP_05943423.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891]
gi|260937722|gb|EEX93710.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891]
Length = 127
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++KE++I G K+ GD++ PEG YY+ + + +S ++ SI+I +PN D A+
Sbjct: 9 VIKEFRIALGKRPKGHKVYEGDQRTPEGRYYLDF--VMDSSDFYRSIHISYPNPNDVAYA 66
Query: 136 -----RTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
G ++ IH GE A GC A+ N++M E+ +V+
Sbjct: 67 NKLNVSPGGNIKIHGLKNGETRPAKYIQSFDWTDGCIAITNQEMDELLKLVK 118
>gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633]
gi|28808283|dbj|BAC61488.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 165
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
++LKEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D +
Sbjct: 46 IILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--VIEDSAFYRSVHISYPDAIDTLE 103
Query: 133 AHNRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
AH R G ++ IH GE GC A+ N++M E +V
Sbjct: 104 AHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCIALTNEEMDEFIQLV 155
>gi|319795776|ref|YP_004157416.1| erfk/ybis/ycfs/ynhg family protein [Variovorax paradoxus EPS]
gi|315598239|gb|ADU39305.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus EPS]
Length = 508
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 30/140 (21%)
Query: 69 NVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNS-KYFL---SIN 123
N D L+ +Y I SGT K+ GD + P G YYI + L+P S K F ++
Sbjct: 264 NSDKGLKLVADYYISVGKSGT--DKLAEGDARTPLGVYYI-TSRLDPKSLKDFYGAGALP 320
Query: 124 IGFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIVRDSLRGN 174
I +PN +D RTG+ + +HG AS GC M N ++++ LR
Sbjct: 321 INYPNPYDVRRGRTGSGIWLHGTPPQQFARAPLASDGCVVMANPDLKQL-------LR-- 371
Query: 175 MQSHIQIQAFPFRMTSKNMQ 194
+QI A P +T++++Q
Sbjct: 372 ---KVQIGATPV-VTARSLQ 387
>gi|269961393|ref|ZP_06175758.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833944|gb|EEZ88038.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 168
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
++KEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D+ A
Sbjct: 50 VVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDY--VINDSAFYRSVHISYPDAIDRLEA 107
Query: 134 HNRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
H R G ++ IH GE S GC A+ N++M E +V+
Sbjct: 108 HRRGVSPGGEIKIHGLKNGETQSPQFIQSFDWTNGCIAITNEEMDEFIKLVK 159
>gi|320158079|ref|YP_004190457.1| hypothetical protein VVM_00523 [Vibrio vulnificus MO6-24/O]
gi|319933391|gb|ADV88254.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
MO6-24/O]
Length = 160
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K++ GD++ PEG Y + + + S ++ S++I +PN D
Sbjct: 42 VIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VTEESAFYRSVHISYPNPIDSLLA 99
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
+ G D+ +HG GC A+ N++M E +V+
Sbjct: 100 KEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIALTNQEMDEFIRLVK 151
>gi|126738023|ref|ZP_01753744.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6]
gi|126720520|gb|EBA17225.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6]
Length = 177
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 21/113 (18%)
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131
E VL E+ I G K E GD + PEG + + N N NS + LS+ + +P D
Sbjct: 59 GETVL--EFDIALGFEPVGDKAEEGDGKTPEGIFRV--NRRNANSSFHLSLGLDYPQAED 114
Query: 132 -----KAHNRTGADLMIHGECA------------SAGCYAMNNKQMQEIYAIV 167
A G D+ IHG+ +AGC A++N +M+ ++ +V
Sbjct: 115 LQRAEDAGIDPGGDIFIHGQPNAVGGALTLPGDWTAGCIAISNSEMERLWQLV 167
>gi|254225243|ref|ZP_04918856.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622342|gb|EAZ50663.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 194
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 133
Query: 134 HNR---TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
R G D+ IHG S GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNSDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|134094136|ref|YP_001099211.1| hypothetical protein HEAR0900 [Herminiimonas arsenicoxydans]
gi|133738039|emb|CAL61084.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 420
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFG-PKIETGDEQAPEGFYYIGWNNLNPNSKYFL- 120
L +++R+ D + L+ +Y + G G K++ GD++ P G YYI F
Sbjct: 165 LYVYERSKD-QVKLVSDYYVS--QGKLGVDKLKEGDQKTPLGVYYITARLDGARLPEFYG 221
Query: 121 --SINIGFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIV 167
++ I +PNE+DKA+ R G+ + +HG +S GC + N ++E+ A V
Sbjct: 222 PGALPINYPNEWDKANGRGGSGIWLHGTPSDSYSRPPLSSDGCVVLTNPDLKELSASV 279
>gi|27367809|ref|NP_763336.1| hypothetical protein VV2_1455 [Vibrio vulnificus CMCP6]
gi|27359382|gb|AAO08326.1|AE016813_78 Uncharacterized protein conserved in bacteria [Vibrio vulnificus
CMCP6]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K++ GD++ PEG Y + + + S ++ S++I +PN D
Sbjct: 43 VIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VTEESAFYRSVHISYPNPIDSLLA 100
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
+ G D+ +HG GC A+ N++M E +V+
Sbjct: 101 KEKGLSPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIALTNQEMDEFIRLVK 152
>gi|37675934|ref|NP_936330.1| hypothetical protein VVA0274 [Vibrio vulnificus YJ016]
gi|37200474|dbj|BAC96300.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
YJ016]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K++ GD++ PEG Y + + + S ++ S++I +PN D
Sbjct: 43 VIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VTEESAFYRSVHISYPNPIDSLLA 100
Query: 136 RT-----GADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
+ G D+ +HG GC A+ N++M E +V+
Sbjct: 101 KEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIALTNQEMDEFIRLVK 152
>gi|260769479|ref|ZP_05878412.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972]
gi|260614817|gb|EEX40003.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972]
Length = 159
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++E++I G K + GD++ PEG YY+ + + +S ++ S++I +PN D+ H
Sbjct: 41 VIREFRIALGKAPKGHKQQEGDQRTPEGRYYLDF--ITEHSNFYRSMHISYPNLRDQRHA 98
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
+ G ++ IHG + GC A+ N++M E +V+
Sbjct: 99 ESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCIAITNQEMDEFLRLVK 150
>gi|315182009|gb|ADT88922.1| hypothetical protein vfu_B00702 [Vibrio furnissii NCTC 11218]
Length = 159
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++E++I G K + GD++ PEG YY+ + + +S ++ S++I +PN D+ H
Sbjct: 41 VIREFRIALGKSPKGHKQQEGDQRTPEGRYYLDF--ITEHSNFYRSMHISYPNLRDQRHA 98
Query: 136 RT-----GADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVR 168
+ G ++ IHG + GC A+ N++M E +V+
Sbjct: 99 ESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCIAITNQEMDEFLRLVK 150
>gi|312892133|ref|ZP_07751631.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
gi|311295384|gb|EFQ72555.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
Length = 173
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P P I I K I + V A+ L+K Y I S G K D + P+G Y+I
Sbjct: 27 PKLPAHITIDKMIAIKSRRQLLVYAQGKLIKTYAISLGSCPAGKKQFEHDGKTPDGVYFI 86
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGECA-------------- 148
N NPNS ++ I +PN+ D + TG D+ IHG
Sbjct: 87 --NAKNPNSVCHKNLGISYPNQADVQQAKKFKLPTGGDIKIHGLTNGLGFIGKFHRWYNW 144
Query: 149 SAGCYAMNNKQMQEIYA 165
+AGC A+ N ++ ++Y+
Sbjct: 145 TAGCIALTNAEIDDLYS 161
>gi|290476305|ref|YP_003469209.1| hypothetical protein XBJ1_3327 [Xenorhabdus bovienii SS-2004]
gi|289175642|emb|CBJ82445.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 67
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
MT +NMQ Y+NN NYSFW L+ ++YF KN + + +I+ QY+
Sbjct: 1 MTQQNMQRYRNNDNYSFWIQLQPAYEYFAKNSKPTTVNVIDGQYI 45
>gi|323493533|ref|ZP_08098655.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546]
gi|323312356|gb|EGA65498.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546]
Length = 158
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
++KE++I G KI GD++ PEG Y++ + + +S+++ SI+I +PN D A+
Sbjct: 40 VVKEFRIALGKRPKGHKIHEGDQRTPEGRYFLDF--VLEDSEFYRSIHISYPNAQDMAYA 97
Query: 135 -NRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIV 167
NR G ++ IH GE A GC A++N++M ++ +V
Sbjct: 98 MNRNLDPGGNIKIHGLKNGETRPANYVQSFDWTDGCIAISNQEMDQLLQLV 148
>gi|229526209|ref|ZP_04415613.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis
VL426]
gi|229527855|ref|ZP_04417246.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)]
gi|229334217|gb|EEN99702.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)]
gi|229336367|gb|EEO01385.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis
VL426]
Length = 160
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 100 QLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|117619935|ref|YP_855158.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561342|gb|ABK38290.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 163
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD-KAHN 135
+K Y I G K GD++ PEG Y + + N N Y+ +I+I +PN D KA N
Sbjct: 48 VKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKTNSN--YYKAIHINYPNLDDIKAAN 105
Query: 136 ----RTGADLMIHGECASA------------GCYAMNNKQMQEIY 164
R G +MIHG+ S GC AM NK + E++
Sbjct: 106 EMGVRPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAMLNKDLDEVW 150
>gi|255322067|ref|ZP_05363215.1| 60 kDa chaperonin [Campylobacter showae RM3277]
gi|255300880|gb|EET80149.1| 60 kDa chaperonin [Campylobacter showae RM3277]
Length = 311
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K + GD + P G Y + + P+ ++ L++++ +PN DKA +TG + I
Sbjct: 84 TGKSGDKFKEGDLKTPVGVYDVT-DKFTPSDPFYGPLAMSLSYPNAHDKAAQKTGGGIWI 142
Query: 144 HG---------ECASAGCYAMNNKQM 160
HG E + GC A NN +
Sbjct: 143 HGLPMKGKRDDEVKTRGCVAFNNDAL 168
>gi|327485387|gb|AEA79793.1| Uncharacterized protein conserved in bacteria [Vibrio cholerae
LMA3894-4]
Length = 187
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 69 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 126
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 127 QLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 178
>gi|300311193|ref|YP_003775285.1| hypothetical protein Hsero_1868 [Herbaspirillum seropedicae SmR1]
gi|300073978|gb|ADJ63377.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 399
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 17/96 (17%)
Query: 87 GTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKY-----FLSINIGFPNEFDKAHNRTGAD 140
G FG K ++GD++ P G YY+ NN P K ++ + +PNE+DK + R+G
Sbjct: 168 GRFGANKSKSGDQRTPIGVYYV--NNRIPGPKLPDFYGTGALPLSYPNEWDKRNGRSGYG 225
Query: 141 LMIHG---------ECASAGCYAMNNKQMQEIYAIV 167
+ +HG +S GC + N +Q +Y+
Sbjct: 226 IWLHGTPSDNFSRPPLSSDGCVVLANPDLQSLYSTA 261
>gi|86137252|ref|ZP_01055830.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
gi|85826576|gb|EAQ46773.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
Length = 178
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 19/106 (17%)
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT- 137
+Y I G K GD + PEG + I N N NS + LS+ I +P D A
Sbjct: 65 QYSIALGFAPIGDKSREGDGKTPEGLFKI--NRRNSNSSFHLSLGIDYPRPEDIARAEAL 122
Query: 138 ----GADLMIHGECA------------SAGCYAMNNKQMQEIYAIV 167
G D+ IHG+ +AGC A++N +M ++ +
Sbjct: 123 GLNPGGDIFIHGQPNRLGNHLMLPGDWTAGCIAISNSEMVALWRLA 168
>gi|153825032|ref|ZP_01977699.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2]
gi|149741357|gb|EDM55391.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2]
Length = 160
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 99
Query: 134 HNR---TGADLMIHGECASA--------------GCYAMNNKQMQEIYAIVR 168
R G D+ IHG S GC A+ N++M E ++V+
Sbjct: 100 QLRGVNPGGDIKIHGLKNSDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|323144996|ref|ZP_08079556.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT
12066]
gi|322415275|gb|EFY06049.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT
12066]
Length = 212
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
+++ Y I G K GD++ PEG Y + + +N NS Y+ S +I +PN+ D
Sbjct: 94 VIRSYWIALSDKPVGDKQYEGDKRTPEGTYTLDY--INYNSNYYKSFHISYPNDQDIEEA 151
Query: 132 -KAHNRTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
K R G +MIHG+ ++ GC A+ N +M E ++V
Sbjct: 152 KKLGKRPGGMIMIHGQPYNSSEYHATVQRSDWTDGCIAILNPEMDEFISLV 202
>gi|153802363|ref|ZP_01956949.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124122082|gb|EAY40825.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 194
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|297579707|ref|ZP_06941634.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535353|gb|EFH74187.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 194
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|229514664|ref|ZP_04404125.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21]
gi|229348644|gb|EEO13602.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21]
Length = 160
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDHQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 100 QLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|223038983|ref|ZP_03609275.1| 60 kDa chaperonin [Campylobacter rectus RM3267]
gi|222879956|gb|EEF15045.1| 60 kDa chaperonin [Campylobacter rectus RM3267]
Length = 313
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMI 143
+G G K + GD + P G Y I + P ++ L++++ +PN DKA +TG + I
Sbjct: 86 TGKSGDKFKEGDLKTPVGVYDI-IDKFTPPDPFYGPLAMSLSYPNAHDKAAKKTGGGIWI 144
Query: 144 HG---------ECASAGCYAMNNKQMQEIYAIVRD 169
HG E + GC A +N + + ++ D
Sbjct: 145 HGLPMNGKREDEVRTRGCVAFDNDALVKFGKLIGD 179
>gi|157163935|ref|YP_001466517.1| 60 kDa chaperonin (protein Cpn60; groEL protein) [Campylobacter
concisus 13826]
gi|112800637|gb|EAT97981.1| putative periplasmic protein [Campylobacter concisus 13826]
Length = 321
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K+ GD + P G Y + PN +Y L+ ++ +PN DK R G+ + IH
Sbjct: 97 GKNGDKLLEGDLKTPVGVYQLT-RRFTPNDRYLGPLAFSLSYPNLLDKLSKRNGSGIWIH 155
Query: 145 G---------ECASAGCYAMNNKQMQEIYAIV 167
G E + GC AM N + + ++
Sbjct: 156 GYPLDGQRTDELKTKGCVAMQNDILMKFDEVI 187
>gi|119477590|ref|ZP_01617740.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium
HTCC2143]
gi|119449093|gb|EAW30333.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium
HTCC2143]
Length = 163
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136
E+ I G K E GDE+ PEG Y + + N +S ++ SI I +PN+ D
Sbjct: 48 EFPIALSPKPRGHKREQGDERTPEGRYILDFKNQ--DSDFYKSIRISYPNQQDLHRAELN 105
Query: 137 ---TGADLMIHG---ECA-----------SAGCYAMNNKQMQEIYAIV 167
G +MIHG E + + GC A+ N M EI+A V
Sbjct: 106 GVDPGGAIMIHGMPNESSLPASLIQQFNWTDGCIAVTNGAMDEIWAAV 153
>gi|268679011|ref|YP_003303442.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM
6946]
gi|268617042|gb|ACZ11407.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM
6946]
Length = 365
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
++I K E+++ + D L+K + + G G KI+ GD + P G Y I
Sbjct: 109 SLIVCEKERKRCEVYRNSEDEGLELIKGHDVIM--GKNGDKIKRGDLKTPVGVYEIT-KR 165
Query: 112 LNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG--------ECASAGCYAMNNKQMQ 161
P+ ++ L+ ++ +PN FD + G+ + IHG E S GC M N +Q
Sbjct: 166 FKPSDPFYGPLAFSLSYPNLFDVLRGKNGSGIWIHGMPLDGKDREDLSKGCVVMENDAIQ 225
>gi|156977970|ref|YP_001448876.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116]
gi|156529564|gb|ABU74649.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116]
Length = 146
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
++KEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D+ A
Sbjct: 28 VVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVY--VINDSAFYRSVHISYPDAIDRLEA 85
Query: 134 HNRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
H R G + IH GE + GC A+ N++M E +V+
Sbjct: 86 HRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNEEMDEFIRLVK 137
>gi|160897527|ref|YP_001563109.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1]
gi|160363111|gb|ABX34724.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1]
Length = 499
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFL---SINIGFPNEFDKAHNRTGADLMIHGEC- 147
K + GD++ P G Y++G + P F ++ + FPN++DKA R+G+ + +HG
Sbjct: 279 KWQEGDQRTPLGIYFVGRHIPGPRLPEFYGKGALTVNFPNDWDKAVGRSGSGIWLHGSPP 338
Query: 148 --------ASAGCYAMNNKQM 160
AS GC + N +
Sbjct: 339 DQFSRAPEASDGCLVLANPDL 359
>gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H]
gi|71146873|gb|AAZ27346.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H]
Length = 171
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 21/111 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136
+KEY + G K + GDE+ PEG Y + + +S ++ +++I +PN+ D + +
Sbjct: 54 IKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYK--KEDSSFYRAMHISYPNQADLDNAK 111
Query: 137 -----TGADLMIHG---ECASA-----------GCYAMNNKQMQEIYAIVR 168
G +MIHG E A GC A+ N +M + ++V+
Sbjct: 112 IKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGCIALTNSEMDQFMSLVK 162
>gi|153834888|ref|ZP_01987555.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01]
gi|148868659|gb|EDL67741.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01]
Length = 160
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
++KEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D+ A
Sbjct: 42 VVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDY--VINDSAFYRSVHISYPDAIDRLEA 99
Query: 134 HNRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
H R G + IH GE + GC A+ N++M E +V+
Sbjct: 100 HRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNEEMDEFIRLVK 151
>gi|229522834|ref|ZP_04412248.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80]
gi|229340051|gb|EEO05059.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80]
Length = 160
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 100 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|121587991|ref|ZP_01677744.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121547789|gb|EAX57878.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
Length = 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
++ EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D+ A
Sbjct: 79 VISEYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDQQLA 136
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + + GC A+ N++M E ++V+
Sbjct: 137 QLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCIAITNQEMDEFLSLVQ 188
>gi|330831248|ref|YP_004394200.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565]
gi|328806384|gb|AEB51583.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565]
Length = 141
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD-KAHN 135
LK Y I G K + GD++ PEG Y + + NS Y+ +I+I +PN D K N
Sbjct: 26 LKRYWIALGPAPKGHKQQEGDQRTPEGRYTLDYKKT--NSGYYKAIHINYPNLDDIKRAN 83
Query: 136 ----RTGADLMIHGECASA------------GCYAMNNKQMQEIYAIV 167
R G +MIHG+ S GC AM N ++ E++ +
Sbjct: 84 ELGVRPGGMIMIHGQRNSIGNRRVQPSNWTNGCIAMLNHELDEVWDAI 131
>gi|229510533|ref|ZP_04400013.1| hypothetical protein VCE_001941 [Vibrio cholerae B33]
gi|229517335|ref|ZP_04406780.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9]
gi|229605146|ref|YP_002875850.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236]
gi|255746022|ref|ZP_05419969.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101]
gi|262162139|ref|ZP_06031154.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1]
gi|229345371|gb|EEO10344.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9]
gi|229352978|gb|EEO17918.1| hypothetical protein VCE_001941 [Vibrio cholerae B33]
gi|229371632|gb|ACQ62054.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236]
gi|255735776|gb|EET91174.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101]
gi|262028214|gb|EEY46872.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1]
Length = 160
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 42 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 99
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 100 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 151
>gi|116750933|ref|YP_847620.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB]
gi|116699997|gb|ABK19185.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB]
Length = 157
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 34/125 (27%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN------ 128
VL++EY I G K GD + PEG ++I NPNS+++ S+ + +P+
Sbjct: 25 VLVREYPIGLGFSPNGDKFMRGDGRTPEGQFFICAK--NPNSRFYKSLGLNYPDPRHAEK 82
Query: 129 ----------------EFDKAHNRT------GADLMIHGECASA----GCYAMNNKQMQE 162
E + R G D+ IHG A GC A+ N M E
Sbjct: 83 ALVWGAISLEDFRNIVEASEGKRRPPSNTVLGGDIFIHGGGAGRDWTWGCVAVRNSAMDE 142
Query: 163 IYAIV 167
+++IV
Sbjct: 143 LFSIV 147
>gi|121728201|ref|ZP_01681235.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|254286657|ref|ZP_04961612.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|121629524|gb|EAX61948.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|150423241|gb|EDN15187.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 194
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153822669|ref|ZP_01975336.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254850432|ref|ZP_05239782.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|9657554|gb|AAF96077.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126519826|gb|EAZ77049.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254846137|gb|EET24551.1| conserved hypothetical protein [Vibrio cholerae MO10]
Length = 194
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|153830346|ref|ZP_01983013.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148874189|gb|EDL72324.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 194
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--KA 133
+++EY+I G K + GD++ PEG Y + + + +S ++ SI+I +PN D A
Sbjct: 76 IIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--IIEDSSFYRSIHISYPNTRDLQLA 133
Query: 134 HNR---TGADLMIHG-------ECA-------SAGCYAMNNKQMQEIYAIVR 168
R G D+ IHG E + GC A+ N++M E ++V+
Sbjct: 134 QLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCIAITNQEMDEFLSLVQ 185
>gi|302343292|ref|YP_003807821.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075]
gi|301639905|gb|ADK85227.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075]
Length = 495
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGAD 140
C G K ++GD++ PEG Y+I + F ++++ +PN D R G
Sbjct: 90 CGTGEKEGDKAQSGDQKTPEGVYFITHRYEDRKVTVFGDRALHLDYPNAIDCVDGRQGDG 149
Query: 141 LMIHGE------CASAGCYAMNNKQMQEIYAIVRD 169
+ +HG +S GC ++N+ + + ++RD
Sbjct: 150 IYLHGTNRDLRPRSSNGCITLDNRDLARLSQMIRD 184
>gi|237807104|ref|YP_002891544.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
gi|237499365|gb|ACQ91958.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
Length = 162
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP--NEFDK 132
V LK Y + GPKI GD + PEG Y + + ++ N Y+ + +I +P N+ +
Sbjct: 43 VPLKRYWVALGPNPRGPKIREGDNKTPEGRYLLDYRKMDSN--YYKAFHISYPSLNDMKR 100
Query: 133 AHN---RTGADLMIHGECASA--------------GCYAMNNKQMQEIYAIV 167
A + G +++HG+ + GC A+ N M E++ V
Sbjct: 101 AQHLGVEPGGQILLHGQRKGSVMSDETLQRSNWTNGCIALINADMDELWESV 152
>gi|218516367|ref|ZP_03513207.1| hypothetical protein Retl8_23254 [Rhizobium etli 8C-3]
Length = 122
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W N
Sbjct: 35 LIRVYKSERRMVLLKGDAP-----IAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWRN 89
Query: 112 LNPNSKYFLSINIGFPN 128
S LS++I +P
Sbjct: 90 A--KSTAHLSLHISYPK 104
>gi|170727585|ref|YP_001761611.1| hypothetical protein Swoo_3246 [Shewanella woodyi ATCC 51908]
gi|169812932|gb|ACA87516.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 160
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 27/126 (21%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
++KEY + + G K++ GDE+ PEG Y + + +S ++ +++I +PN+ D
Sbjct: 42 IVKEYDVAFGANPKGHKVQEGDEKTPEGTYTLDYK--KEDSSFYRAMHISYPNKQDIENA 99
Query: 132 -KAHNRTGADLMIHGECA--------------SAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
K G +M+HG+ + GC A++N +M E +V ++
Sbjct: 100 AKRGVSPGGFIMVHGQRNWLGWFAPITQSFNWTNGCIALSNSEMDEFMDLV------SLG 153
Query: 177 SHIQIQ 182
+ IQI+
Sbjct: 154 TEIQIE 159
>gi|307720793|ref|YP_003891933.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM
16294]
gi|306978886|gb|ADN08921.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM
16294]
Length = 330
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPNS 116
K+++ L I+ ++ + Y L KEY A++G G K + GD + P G Y I +S
Sbjct: 80 KSKSELLIYSKDSNNTYKLRKEY--SAFTGKLKGDKRKEGDLKTPIGVYDIIKKISKVDS 137
Query: 117 KYF-LSINIGFPNEFDKAHNRTGADLMIHG-------ECASAGCYAMNNKQMQ 161
Y ++ +PN +D+ +TG + IHG + + GC A+NNK ++
Sbjct: 138 FYGPMAFVTSYPNLYDRYEGKTGQGIWIHGLPTNQERDAFTKGCIAINNKSIE 190
>gi|82703004|ref|YP_412570.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
gi|82411069|gb|ABB75178.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
Length = 413
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 68 RNVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKYF---LSIN 123
+NVD L +Y I +G G K++ GD++ P G Y++ N F ++
Sbjct: 165 KNVDGSPRYLADYYIS--TGKNGSQKLKEGDKKTPIGVYFVTDNLPRQRLSDFYGGMAFP 222
Query: 124 IGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168
I +PNE+DK H R+G + +HG AS GC + N + + + ++
Sbjct: 223 INYPNEWDKRHGRSGYGIWLHGTPPDTYSRPPRASDGCVVLANDDLNALASTLQ 276
>gi|329120497|ref|ZP_08249162.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327461955|gb|EGF08285.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 235
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH- 134
LLK Y + G K GD + PEG Y I + NP+S Y ++ + +PN D+A
Sbjct: 117 LLKTYPVALGRAPVGHKQFEGDGKTPEGRYTI--SGRNPHSGYHKNLGVSYPNRADRARA 174
Query: 135 ----NRTGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIV 167
G D+ IHG + GC A+ ++++ E+YA+V
Sbjct: 175 AAQGRSPGGDIKIHGLKNGLGAIGAQHLRRDWTDGCIAVTDREIDELYALV 225
>gi|298530698|ref|ZP_07018100.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510072|gb|EFI33976.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 421
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 76 LLKEYKICAWSGT-FGPKIETGDEQAPEGFYYI----GWNNLNPNSKYFLSINIGFPNEF 130
L KEYK +G G K GD + PEG Y+I +L+ + + + + +PN
Sbjct: 53 LRKEYKWEVTTGEGVGDKEVEGDLKTPEGIYFIERQIDTRHLDRDLYGEMGLTLNYPNPV 112
Query: 131 DKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
D+A +TG + +HG + GC AM+ K M ++ +Q+Q
Sbjct: 113 DRAKGKTGFGIWLHGRGKEVVPFDTEGCVAMDMKYMH------------RLEDMVQLQNT 160
Query: 185 PFRMTS 190
P +TS
Sbjct: 161 PVVITS 166
>gi|256830867|ref|YP_003159595.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
4028]
gi|256580043|gb|ACU91179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
4028]
Length = 409
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 72/196 (36%), Gaps = 40/196 (20%)
Query: 1 MTNRYNILLFALF--IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
M R IL+ A +F A HP + L +++ R F V+R
Sbjct: 1 MDTRTFILIAAFLSLLFAAPARPQSWTASLAPHPKAPPLFMAVDMARQRAF---VVR--- 54
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI---GWNNLNPN 115
N D E +K+ C G K+ GD + PEG Y++ L+ +
Sbjct: 55 ----------NKDGELKKMKDMS-CTTGMHGGGKLLEGDRKTPEGVYFLQGKATGGLDFD 103
Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGECAS------AGCYAMNNKQMQEIYAIVRD 169
S + + +PN D+ +TG +MIHG S GC + N +
Sbjct: 104 SFGNTAFPLNYPNPVDRIQGKTGNGIMIHGRGRSFGPRQTLGCVVLENDDVD-------- 155
Query: 170 SLRGNMQSHIQIQAFP 185
+ H++I A P
Sbjct: 156 ----TLDRHVRIHATP 167
>gi|254227859|ref|ZP_04921289.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25]
gi|262396152|ref|YP_003288005.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25]
gi|151939355|gb|EDN58183.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25]
gi|262339746|gb|ACY53540.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25]
Length = 153
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 27/127 (21%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
+LKEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D +
Sbjct: 34 TILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDY--VIEDSAFYRSVHISYPDAIDTLE 91
Query: 133 AHNRT---GADLMIH----GECA----------SAGCYAMNNKQMQEIYAIVRDSLRGNM 175
A R G ++ IH GE + GC A+ N++M E +V M
Sbjct: 92 AKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCIAITNEEMDEFIQLV------EM 145
Query: 176 QSHIQIQ 182
+ IQI+
Sbjct: 146 GTPIQIE 152
>gi|239909259|ref|YP_002956001.1| hypothetical protein DMR_46240 [Desulfovibrio magneticus RS-1]
gi|239799126|dbj|BAH78115.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 759
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI---GWNNLNPNSKYFLSINIGFPNEFD 131
V + E+ CA G K + GD + PEG Y+I + LN L+ + FPN D
Sbjct: 58 VRVAEFLPCATGQLLGDKFKEGDLRTPEGVYFIVRRKASGLNYELYGDLAFPLNFPNPAD 117
Query: 132 KAHNRTGADLMIHGECAS------AGCYAMNNKQMQEI 163
+TG + IHG S GC A+N + +
Sbjct: 118 VVRKKTGHGIWIHGRGNSIVPYVTQGCVALNTPDLHRL 155
>gi|163803216|ref|ZP_02197097.1| hypothetical protein 1103602000599_AND4_11960 [Vibrio sp. AND4]
gi|159172971|gb|EDP57807.1| hypothetical protein AND4_11960 [Vibrio sp. AND4]
Length = 160
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK--A 133
++KE++I S G K E GD + PEG Y + N + NS ++ S++I +P+ D+ A
Sbjct: 42 VVKEFRIALGSNPKGHKQEEGDNRTPEGDYTL--NYVINNSAFYRSVHISYPDAIDRLEA 99
Query: 134 HNRT---GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
R G + IH GE + GC A+ N++M E +V+
Sbjct: 100 QRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCIAITNQEMDEFIRLVQ 151
>gi|218531404|ref|YP_002422220.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
gi|218523707|gb|ACK84292.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
Length = 182
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 42 QKKRTSPFHPTVIRIFKNENIL-EIWKRNVDAEYVLLKEYKICAW---SGTFGP---KIE 94
Q RT P P V + + +L E R + LL+E ++ A S F P K
Sbjct: 29 QVGRTEP--PLVAEAERADRVLVEKAARRL----TLLREGRVLATYPISLGFAPEGHKAR 82
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG---- 145
GD + PEG Y + + NP S LS+ + +P+ D A + G D+MIHG
Sbjct: 83 DGDGRTPEGVYAVAFR--NPRSVAHLSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNG 140
Query: 146 ----------ECASAGCYAMNNKQMQEIYAIV 167
+ + GC + N +M+ IYA V
Sbjct: 141 FSWLGRLHRLKDWTQGCVGVTNAEMRAIYARV 172
>gi|239817408|ref|YP_002946318.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
gi|239803985|gb|ACS21052.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
Length = 374
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 28/139 (20%)
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS-KYFL---SINI 124
N D L+ +Y + G E GD + P G YY+ ++L+P S + F ++ I
Sbjct: 128 NSDKGLQLVADYYVSVGKSGIGKATE-GDARTPLGVYYVT-SSLDPKSLRDFYGAGALPI 185
Query: 125 GFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIVRDSLRGNM 175
+PN +D +TG+ + +HG AS GC M N ++++ LR
Sbjct: 186 NYPNPYDVRRGKTGSGIWLHGTPPQQFSRAPLASDGCVVMANPDLKQL-------LR--- 235
Query: 176 QSHIQIQAFPFRMTSKNMQ 194
+QI A P +T+ ++Q
Sbjct: 236 --KVQIGATPV-VTAPSLQ 251
>gi|260221390|emb|CBA29904.1| hypothetical protein Csp_A14490 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 367
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL----SINI 124
N +A LL Y I G +E GD++ P G Y+I +NL+P S L ++ +
Sbjct: 123 NTEAGPRLLANYYISVGKAGVGKNVE-GDQRTPLGAYFIT-SNLDPTSLKDLYGSGALPV 180
Query: 125 GFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIV 167
+PN D +TG + +HG A+ GC A+ N + I V
Sbjct: 181 NYPNVLDLRRGKTGGGIWLHGTPSTQFTRAPQATDGCVAVANPDLLRIINTV 232
>gi|152991672|ref|YP_001357393.1| hypothetical protein SUN_0076 [Sulfurovum sp. NBC37-1]
gi|151423533|dbj|BAF71036.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 1 MTNRYNILLFA--LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-VIRIF 57
M N+ L+++ L +F +GC S K ++ LSE M + S I +
Sbjct: 26 MNNKIYFLIYSIVLVLFFSGCEPSGP---KNQYNLSECKKELMTAEDYSEADAIDRIVVV 82
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E + ++K D + + + I G K + GD + PEG ++I +P K
Sbjct: 83 KKERKMYLYK---DGK--VKGTFPISLGRNPVGHKQQKGDYRTPEGEFFIHRKLCSP--K 135
Query: 118 YFLSINIGFPNEFDKAHNRT-----GADLMIHGECA----------------SAGCYAMN 156
Y+ S+ I +P DKA R G D+ IH + + GC A+
Sbjct: 136 YYRSLCISYPRPEDKARARARGVNPGGDITIHAQPKWNADGKGDKYTLNRNWTQGCVAVT 195
Query: 157 NKQMQEIYAIVRDSL 171
N M++++ VR+ +
Sbjct: 196 NSSMKKLWYAVREGV 210
>gi|254562322|ref|YP_003069417.1| hypothetical protein METDI3936 [Methylobacterium extorquens DM4]
gi|254269600|emb|CAX25571.1| conserved hypothethical protein [Methylobacterium extorquens DM4]
Length = 182
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 42 QKKRTSPFHPTVIRIFKNENIL-EIWKRNVDAEYVLLKEYKICAW---SGTFGP---KIE 94
Q RT P P V + + +L E R + LL+E ++ A S F P K
Sbjct: 29 QVGRTEP--PLVAEAERADRVLVEKAARRL----TLLREGRVLATYPISLGFAPEGHKAR 82
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG---- 145
GD + PEG Y + + NP S LS+ + +P+ D A + G D+MIHG
Sbjct: 83 EGDGRTPEGVYAVAFR--NPRSVAHLSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNG 140
Query: 146 ----------ECASAGCYAMNNKQMQEIYAIV 167
+ + GC + N +M+ IYA V
Sbjct: 141 FSWLGRLHRLKDWTQGCVGVTNAEMRAIYARV 172
>gi|325294451|ref|YP_004280965.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064899|gb|ADY72906.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 353
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 8 LLFALFIFLNGCHHSRSLIDKA--EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
L LF + R LI KA + +S LI+ P I + K IL +
Sbjct: 52 LQLLLFSYAGESKEVRKLIKKAYPKRLISNVLIL--------PPSINAIIVDKTREILYV 103
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY-IGWNNLNPNSKYFLSINI 124
K + +V+ K++ C G K+E GD + PEG Y+ + W P + +
Sbjct: 104 IKMDKSIPHVI-KKFP-CITGKKLGDKLEEGDLRTPEGIYFPLYWRTNLPKLYGIGAFPL 161
Query: 125 GFPNEFD-KAHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEIYAIVRDSL 171
+PN D K R G + IHG ++ GC + N+ ++E+ ++ L
Sbjct: 162 NYPNLIDKKVLKRNGHGIWIHGTNDPNRPPHSTNGCIVLKNEYLKELKKLIDPKL 216
>gi|222824134|ref|YP_002575708.1| hypothetical protein Cla_1135 [Campylobacter lari RM2100]
gi|222539356|gb|ACM64457.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 323
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 7 ILLFALFIFLNGCHHSR----SLIDKAEHPLSENL------IISMQKKRTSPFH----PT 52
++LF+L +F+N ++ ID E L + L + ++ K S +
Sbjct: 6 LVLFSLVVFVNASDLAKIYLNQGIDAVEKVLEQELSKKDFWLDEIKDKNVSLGYYEENVA 65
Query: 53 VIRIFKNENILEIWKRN---VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
++ K++ I+ ++ N V+ +++ + +G G K GD + P GFY +G
Sbjct: 66 IVLTNKSDKIIRVYHYNDGKVEKKFI-----QKDVLTGLAGDKEIEGDLKTPIGFYELG- 119
Query: 110 NNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG---------ECASAGCYAMNNK 158
P Y+ + +PN DK +TG + IHG + GC A+ N
Sbjct: 120 KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAVQND 179
Query: 159 QMQEIYAIVRD 169
+++ +V D
Sbjct: 180 LLEDFNKLVAD 190
>gi|91228120|ref|ZP_01262162.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01]
gi|91188238|gb|EAS74538.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01]
Length = 160
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 27/127 (21%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
+LKEY+I + G K E GD + PEG Y + + + +S ++ S++I +P+ D +
Sbjct: 41 AVLKEYRIALGANPQGHKQEEGDNRTPEGEYTLDY--VIEDSAFYRSVHISYPDAIDTLE 98
Query: 133 AHNRT---GADLMIH----GECA----------SAGCYAMNNKQMQEIYAIVRDSLRGNM 175
A R G ++ IH GE + GC A+ N++M E +V M
Sbjct: 99 AKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCIAITNEEMDEFIQLVE------M 152
Query: 176 QSHIQIQ 182
+ IQI+
Sbjct: 153 GTPIQIE 159
>gi|224373456|ref|YP_002607828.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588865|gb|ACM92601.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 319
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ K++ IL+I++ N D+ + L+ K+ +G G K + GD + P G Y +
Sbjct: 63 ILVCVKSKKILKIFENN-DSTFKLIDTVKVL--TGLDGDKKKEGDLKTPIGVYKLKGLIE 119
Query: 113 NPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--------ECASAGCYAMNNKQMQEI 163
N +S Y + G+PN FDK +++ G + IHG + + GC M+N ++ ++
Sbjct: 120 NVDSFYGPFAFVTGYPNLFDKINHKNGHGIWIHGVPLEGKRDDNNTKGCIVMDNNKLLQL 179
>gi|297537707|ref|YP_003673476.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
gi|297257054|gb|ADI28899.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
Length = 408
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAH 134
+ +Y + G + E GD++ P G Y+ P + + + + +PNE+D H
Sbjct: 171 VADYYVTVGKNGVGKQTE-GDKRTPIGVYFASQKLTKPLADMYGNGAYPLNYPNEWDMQH 229
Query: 135 NRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168
NR+G+ + +HG AS GC + N+ + I I++
Sbjct: 230 NRSGSGIWLHGTPSNTYSRPPNASDGCVVLTNQDLNAIAPILQ 272
>gi|86360290|ref|YP_472178.1| hypothetical protein RHE_PE00012 [Rhizobium etli CFN 42]
gi|86284392|gb|ABC93451.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 196
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + K + + Y+I S GPK GDE+ PEG Y I W
Sbjct: 36 LIRVYKSERRMVFLKGDAP-----IAAYEISLGSAADAGPKQREGDEKTPEGPYEIDWR- 89
Query: 112 LNPNSKYFLSINIGFPN 128
NP S LS++I +P
Sbjct: 90 -NPKSTAHLSLHISYPK 105
>gi|224370133|ref|YP_002604297.1| putative ErfK family protein (precursor) [Desulfobacterium
autotrophicum HRM2]
gi|223692850|gb|ACN16133.1| putative ErfK family protein (precursor) [Desulfobacterium
autotrophicum HRM2]
Length = 347
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG-------FPNEFDKAHN 135
C+ + G K+++GD++ PEG Y++ + +LS G +PN D+
Sbjct: 84 CSTGASPGRKLKSGDQKTPEGVYFL----TDAYEDRYLSAVYGKKAFPTDYPNFIDRRKG 139
Query: 136 RTGADLMIHGE------CASAGCYAMNNKQM 160
R G+ + +HG S GC AMNN+ +
Sbjct: 140 RDGSAIWLHGTNKPLKPMDSNGCVAMNNQDI 170
>gi|240139898|ref|YP_002964375.1| hypothetical protein MexAM1_META1p3361 [Methylobacterium extorquens
AM1]
gi|240009872|gb|ACS41098.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 182
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 42 QKKRTSPFHPTVIRIFKNENIL-EIWKRNVDAEYVLLKEYKICAW---SGTFGP---KIE 94
Q RT P P V + + +L E R + LL+E ++ A S F P K
Sbjct: 29 QVGRTEP--PLVAEAERADRVLVEKAARRL----TLLREGRVLATYPISLGFVPEGHKAR 82
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHG---- 145
GD + PEG Y I + NP S LS+ + +P+ D A + G D+MIHG
Sbjct: 83 EGDGRTPEGVYAIAFR--NPRSVAHLSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNG 140
Query: 146 ----------ECASAGCYAMNNKQMQEIYAIV 167
+ + GC + N +M+ IYA V
Sbjct: 141 FSWLGRLHRLKDWTQGCVGVTNAEMRAIYARV 172
>gi|254469080|ref|ZP_05082486.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
gi|207087890|gb|EDZ65173.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
Length = 393
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKA 133
+ EY +G+ G E GD++ P G Y +G P S ++ + I +PN +DK
Sbjct: 154 IFDEYASIGKNGS-GKNFE-GDKKTPLGVYTLGKKITQPLSDFYGDGAFPIDYPNVYDKL 211
Query: 134 HNRTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIVRD 169
N+TG + IHG +S GC ++N+ + + +I++D
Sbjct: 212 LNKTGHGIWIHGTPKDTYSRAPKSSDGCIVISNENLNILESILKD 256
>gi|154174131|ref|YP_001408672.1| putative periplasmic protein [Campylobacter curvus 525.92]
gi|112802069|gb|EAT99413.1| putative periplasmic protein [Campylobacter curvus 525.92]
Length = 321
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K+ GD + P G Y + P+ Y L+ ++ +PN DK R G + IH
Sbjct: 97 GKSGDKLLEGDLKTPVGVYQLT-RRFTPSDPYLGPLAFSLSYPNLLDKLAKRNGGGIWIH 155
Query: 145 G---------ECASAGCYAMNNKQMQEIYAIV 167
G E + GC AM N + + ++
Sbjct: 156 GYPLDGQRTDELKTKGCVAMENDILMKFDKVI 187
>gi|149194098|ref|ZP_01871196.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2]
gi|149136051|gb|EDM24529.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2]
Length = 319
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K + GD + P G Y + N + P++ ++ L+ +PN FDK + + G + IH
Sbjct: 95 GKLGDKQKEGDLKTPIGNYTL-INKIKPSNTFYGPLAFVTSYPNLFDKLNKKNGYGIWIH 153
Query: 145 GEC-------ASAGCYAMNNKQMQEIYAIV 167
G+ S GC +NN +++ + ++
Sbjct: 154 GKPLDGERGDLSKGCIVLNNDEIKHLDTLI 183
>gi|313673241|ref|YP_004051352.1| erfk/ybis/ycfs/ynhg family protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939997|gb|ADR19189.1| ErfK/YbiS/YcfS/YnhG family protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 471
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG-----FPNE 129
VL+KE+ G K+ GD++ P G YY+ P SK G +PN
Sbjct: 62 VLIKEFDDVIVGEGNGDKLREGDKKTPTGVYYVI--GFIPQSKLDKIYGTGAFPLNYPNF 119
Query: 130 FDKAHNRTGADLMIHG------ECASAGCYAMNNKQMQEIYAI 166
DK + +TG + IHG + S GC + N+ + + +I
Sbjct: 120 VDKLYGKTGHGIWIHGRDPLEKKQVSKGCVVLKNEDINYLKSI 162
>gi|145297687|ref|YP_001140528.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850459|gb|ABO88780.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 173
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD-KAHN 135
+K Y I G K GD++ PEG Y + + N N Y+ +I+I +PN D K N
Sbjct: 58 VKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKTNSN--YYKAIHINYPNLDDIKTAN 115
Query: 136 RTGAD----LMIHGECASA------------GCYAMNNKQMQEIY 164
G + +MIHG+ S GC AM N + E++
Sbjct: 116 EMGVNPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAMLNHDLDEVW 160
>gi|319762809|ref|YP_004126746.1| erfk/ybis/ycfs/ynhg family protein [Alicycliphilus denitrificans
BC]
gi|330824889|ref|YP_004388192.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
K601]
gi|317117370|gb|ADU99858.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
BC]
gi|329310261|gb|AEB84676.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
K601]
Length = 456
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 69 NVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPNS-KYFL---SIN 123
N D VL+ +Y A G G K GD++ P G YYI + L+P + K F ++
Sbjct: 211 NTDKGLVLVADY--YASVGKLGTEKQAEGDQRTPLGVYYIT-SRLDPATLKDFYGAGALP 267
Query: 124 IGFPNEFDKAHNRTGADLMIHG---------ECASAGCYAMNNKQMQEIYAIV 167
I +PN D +TG+ + +HG A+ GC + N ++ + V
Sbjct: 268 INYPNPLDLRRGKTGSGIWLHGTPPSQFSRAPLATDGCLVLANPDLERLLKTV 320
>gi|42522629|ref|NP_968009.1| hypothetical protein Bd1075 [Bdellovibrio bacteriovorus HD100]
gi|39575161|emb|CAE79002.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100]
Length = 332
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 21/138 (15%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP----KIETG 96
+Q T F VI + K + L +++RN E + KI + G K +
Sbjct: 39 LQISETEAFSRYVILVDKEQRKLSVFERN--GEQI----QKITEYPADIGKMGGNKTKRD 92
Query: 97 DEQAPEGFYYIGWNNLNPNSKY----FLSINIGFPNEFDKAHNRTGADLMIHG------- 145
D + PEG Y++ P + L+ +PN FDK N+TG+ + +H
Sbjct: 93 DHKTPEGIYFLQERLSQPKIPFSLYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPL 152
Query: 146 ECASAGCYAMNNKQMQEI 163
S GC + N ++++
Sbjct: 153 TRGSRGCVVVRNDVIKKL 170
>gi|221066750|ref|ZP_03542855.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
gi|220711773|gb|EED67141.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
Length = 438
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIG 125
N D + ++ + + G K E GD++ P+G Y+IG P ++ +
Sbjct: 193 NEDGRFRVVGNFYVSVGKLGLGKK-EEGDQRTPQGLYFIGRQIPGMKLPEFYGLGALTMN 251
Query: 126 FPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160
+PN++D+ R+G+ + +HG AS GC + N +
Sbjct: 252 YPNDWDRVVGRSGSGIWLHGTPPDQYARLPEASDGCVVLANPDL 295
>gi|331007095|ref|ZP_08330318.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989]
gi|330419090|gb|EGG93533.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989]
Length = 312
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P VI + L ++KR D ++LL+ +G IE GD + P G Y I
Sbjct: 45 YPHVIISELSTGKLYVYKRQADGSFLLLETMHTSIGKKGYGKNIE-GDNKTPVGVYRIT- 102
Query: 110 NNLNP--------NSKYFLSINIGFPNEFDKAHNRTGADLMIHGE-----------CASA 150
++L P N+ Y + +PN +DK + RTG + +H E S
Sbjct: 103 SHLTPEQLDAFYGNAAY----PVNYPNAWDKINERTGYGIWLHAEPIGLTTKTRPLLDSN 158
Query: 151 GCYAMNNKQMQEI 163
GC ++N + I
Sbjct: 159 GCIVLSNNDIDII 171
>gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100]
gi|39575459|emb|CAE79627.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+L Y + G K GD++ PEG Y+ S+Y L + I +PN D A
Sbjct: 90 VLATYAVALGGNPQGHKKNEGDQRTPEGRYFFDLKKA--KSEYHLGLRINYPNARDLAEA 147
Query: 136 RT------GADLMIHGECAS--------------AGCYAMNNKQMQEIYA 165
+ G ++IHG S GC A+ N +++EIYA
Sbjct: 148 KKNGIKNPGDSILIHGLPNSWVKRKVIRHPRDWTKGCMAVRNYEIEEIYA 197
>gi|165924287|ref|ZP_02220119.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|165916267|gb|EDR34871.1| putative lipoprotein [Coxiella burnetii RSA 334]
Length = 107
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIV 167
P S++ LS+ + +PN D+ + R G D+ IHG AS GC + NK +++++ +
Sbjct: 1 PASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA 60
>gi|242280688|ref|YP_002992817.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM
2638]
gi|242123582|gb|ACS81278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM
2638]
Length = 424
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYY-----IGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
CA G K+ GD + PEG Y+ G N K +N FPN D+ +T
Sbjct: 70 CATGQVAGDKVVEGDLKTPEGIYFTTGKRTGLKNYTLYGKMAFPLN--FPNPVDRIKGKT 127
Query: 138 GADLMIHGECA------SAGCYAMNNKQMQ 161
G + IHG + GC A+ N M
Sbjct: 128 GYGIWIHGRGKELVPMDTQGCVALVNSDMD 157
>gi|312881783|ref|ZP_07741557.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370534|gb|EFP98012.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 157
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---- 134
E++I G K E GD++ PEG YY+ + + +S+++ SI+I +P+ D+
Sbjct: 42 EFRIALGKQPKGHKSEQGDQRTPEGRYYLQF--ILEDSEFYRSIHISYPSLDDRLGAMIF 99
Query: 135 NRT-GADLMIH----GECASA----------GCYAMNNKQMQEIYAIVRDS 170
NR G ++ IH GE A GC A++N+ M ++V++
Sbjct: 100 NRDPGGNIKIHGLRNGENRPAQFVQSFDWTNGCIALSNQDMDTFLSLVKEG 150
>gi|90022704|ref|YP_528531.1| hypothetical protein Sde_3062 [Saccharophagus degradans 2-40]
gi|89952304|gb|ABD82319.1| ErfK/YbiS/YcfS/YnhG family protein [Saccharophagus degradans 2-40]
Length = 158
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 26/135 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ L + K ++K+Y + + G K + GDE+ PEG Y + +
Sbjct: 22 LVKVVKSKGALYLMKGET-----VVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYK-- 74
Query: 113 NPNSKYFLSINIGFPNEFD--KAHNR---TGADLMIHGECA--------------SAGCY 153
+S ++ +++I +PN D KA R G +M+HG+ + GC
Sbjct: 75 KEDSAFYRAMHISYPNAEDVRKAKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCI 134
Query: 154 AMNNKQMQEIYAIVR 168
A+ N M E V+
Sbjct: 135 ALTNSDMDEFMDKVK 149
>gi|253995882|ref|YP_003047946.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
gi|253982561|gb|ACT47419.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
Length = 417
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFL---SINIGFPNEFDKAHNRTGADLMIHGEC- 147
K GD++ P G Y+ L F + + +PNE+DKAHNR G+ + +HG
Sbjct: 193 KQSEGDKRTPIGVYFAS-TKLKQQLPDFYGEGAYPLSYPNEWDKAHNRNGSGIWLHGTPS 251
Query: 148 --------ASAGCYAMNNKQMQEIYAIVR 168
AS GC + N+ ++ + +++
Sbjct: 252 STYSRPPRASDGCVVVANQDLKALEPVLQ 280
>gi|332703549|ref|ZP_08423637.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332553698|gb|EGJ50742.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 457
Score = 42.0 bits (97), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG----FPNEFDKAHNRTG 138
CA G K GD + PEG Y+I L Y L +I FPN D+ +TG
Sbjct: 101 CATGQVAGDKYREGDLRTPEGVYFIQ-RKLTTGLDYQLYGDIAYTLNFPNPVDRIEGKTG 159
Query: 139 ADLMIHGECA------SAGCYAMNNKQM 160
+ IHG + GC A+N +
Sbjct: 160 YGIWIHGRGGKIVPMETRGCVALNTPDL 187
>gi|308270997|emb|CBX27607.1| hypothetical protein N47_H24290 [uncultured Desulfobacterium sp.]
Length = 166
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD-----KAHNRTGADLMIH 144
G K + GD + PEG Y I ++ +S+++ S+++ +PN D K+ G L IH
Sbjct: 62 GRKAQKGDNRTPEGLYIIVQHD--ADSRFYKSLHLSYPNRSDIIRSQKSGYPPGNALAIH 119
Query: 145 GECA--------------SAGCYAMNNKQMQEIYAIVRD 169
G + GC A++N++M EI+ +V +
Sbjct: 120 GLPEGFEDLGTFQSKRNWTKGCIAVSNEEMDEIWELVEN 158
>gi|253827436|ref|ZP_04870321.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510842|gb|EES89501.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 331
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K + GD P G Y + +N + Y L+ +PN +D+ RTG + IHG
Sbjct: 106 GNKQKEGDLATPIGVYTLEKRLVNLDQYYGPLAFTTSYPNLYDRLQKRTGYGIWIHGMPL 165
Query: 146 -----ECASAGCYAMNNKQMQEIYAIV--RDSL 171
E + GC A+ N + + I+ RDSL
Sbjct: 166 NGNREELNTRGCIAIENNLLTTVDQIIDYRDSL 198
>gi|224418109|ref|ZP_03656115.1| hypothetical protein HcanM9_02416 [Helicobacter canadensis MIT
98-5491]
gi|313141644|ref|ZP_07803837.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130675|gb|EFR48292.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 331
Score = 41.6 bits (96), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K + GD P G Y + +N + Y L+ +PN +D+ RTG + IHG
Sbjct: 106 GNKQKEGDLATPIGVYTLEKRLVNLDQYYGPLAFTTSYPNLYDRLQKRTGYGIWIHGMPL 165
Query: 146 -----ECASAGCYAMNNKQMQEIYAIV--RDSL 171
E + GC A+ N + + I+ RDSL
Sbjct: 166 NGNREELNTRGCIAIENNLLTTVDQIIDYRDSL 198
>gi|237752719|ref|ZP_04583199.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376208|gb|EEO26299.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 324
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K + GD P G Y + +N + Y L+ +PN +D+ RTG + IHG
Sbjct: 104 GHKEKEGDLATPIGVYSLNARLVNLDQYYGPLAFATNYPNLYDRLQKRTGYGIWIHGMPL 163
Query: 146 -----ECASAGCYAMNNKQMQEIYAIV 167
E + GC A+ N ++ + A++
Sbjct: 164 DGNRKELNTRGCIAIENDKLSSVDALI 190
>gi|255527509|ref|ZP_05394378.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
gi|255508814|gb|EET85185.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
Length = 220
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
K+ + I+++K +LE++ + L+ +KI G K + GD + PEG
Sbjct: 62 KKDAVAEKASIKVYKKRRVLELYSSDK-----LVGRFKIGLGRSPEGYKEKEGDNKTPEG 116
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPN 128
YYI + N N YF I I +PN
Sbjct: 117 SYYICYRNGNTKYTYF--IGISYPN 139
>gi|315453295|ref|YP_004073565.1| hypothetical protein HFELIS_08910 [Helicobacter felis ATCC 49179]
gi|315132347|emb|CBY82975.1| putative periplasmic protein [Helicobacter felis ATCC 49179]
Length = 335
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG-- 145
G KI GD+ P G Y I L Y+ ++ +PN FD A R G + IHG
Sbjct: 110 GEKITEGDKATPIGVYQI-LKKLTGLDAYYGPFALETNYPNPFDVARKRNGHGIWIHGLP 168
Query: 146 ------ECASAGCYAMNNKQMQEIYAIVRD 169
E + GC A+ N +++ ++D
Sbjct: 169 LDGKRDELNTKGCIAIQNPILKDYGTRLKD 198
>gi|162451714|ref|YP_001614081.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56']
gi|161162296|emb|CAN93601.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56']
Length = 178
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 33/137 (24%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T IRI K+E+ L++ A +++ Y++ G GPK GD + P G Y +
Sbjct: 36 TEIRIDKSEHTLDLV-----AGGKIVRSYRVALGPGGPGPKRYEGDRRTPVGTYRV-AGR 89
Query: 112 LNPNSKYFLSINIGFPNEFDKAH-------------NRTGADLMIHGECASA-------- 150
+N FL ++ +PNE D+A G + IHG ++
Sbjct: 90 INGLFHRFLIVS--YPNEEDRARFAELKRRGEVPPGRGVGHSIGIHGVGSAQLAGVHKES 147
Query: 151 ----GCYAMNNKQMQEI 163
GC A+++ ++ EI
Sbjct: 148 DWTLGCIALDDDEIDEI 164
>gi|323700390|ref|ZP_08112302.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. ND132]
gi|323460322|gb|EGB16187.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
ND132]
Length = 419
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF----PNEFDKAHNRTG 138
C + G K GD + P G Y++G + +N + L NI + PN D+ +TG
Sbjct: 63 CTTGQSMGDKAVEGDMRTPVGVYFVG-HRINRTLDWDLYGNIAYSLNYPNPIDRIKGKTG 121
Query: 139 ADLMIHGECA------SAGCYAMNNKQMQEI 163
+ + +HG + GC A+ M+++
Sbjct: 122 SGIWLHGRGKTFLPRDTLGCVALKVPDMKDV 152
>gi|294338856|emb|CAZ87190.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 434
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 87 GTFGP-KIETGDEQAPEGFYYI----GWNNLNP-NSKYFLSINIGFPNEFDKAHNRTGAD 140
G FG K + GD + P G Y+I G +L P L++N +PNE+DK TG
Sbjct: 223 GKFGAGKTQIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLN--YPNEWDKQQGHTGFG 280
Query: 141 LMIHG---------ECASAGCYAMNNKQMQEIYAIVRDSLRGN----MQSHIQ 180
+ +HG AS GC ++N ++ +++ D+ G+ + H+Q
Sbjct: 281 VWLHGTPPGSYARVPLASDGCVVLSNP---DVLSLMADTPAGSTPVVITRHVQ 330
>gi|153953429|ref|YP_001394194.1| hypothetical protein CKL_0793 [Clostridium kluyveri DSM 555]
gi|219854053|ref|YP_002471175.1| hypothetical protein CKR_0710 [Clostridium kluyveri NBRC 12016]
gi|146346310|gb|EDK32846.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567777|dbj|BAH05761.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 220
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I+I+K + I+E++ N L+ +K+ G K GD + PEG YYI + N
Sbjct: 70 TFIKIYKEKRIMELYGDNK-----LIGRFKMALGRVPQGKKQREGDNKTPEGNYYICYIN 124
Query: 112 LNPNSKYFLSINIGFPN 128
KYFL I+ +PN
Sbjct: 125 SKTKYKYFLGIS--YPN 139
>gi|78486093|ref|YP_392018.1| ErfK/YbiS/YcfS/YnhG [Thiomicrospira crunogena XCL-2]
gi|78364379|gb|ABB42344.1| Hypothetical protein Tcr_1752 [Thiomicrospira crunogena XCL-2]
Length = 375
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 96 GDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE------ 146
GD + P G Y I ++ P ++ + +PN +DK RTG+ + +HG
Sbjct: 188 GDLKTPIGIYKIEKELSDSKLPELYGVAALTLNYPNSWDKQKGRTGSGIWLHGTPRSTYS 247
Query: 147 ---CASAGCYAMNNKQMQEI 163
AS GC +NN MQ +
Sbjct: 248 RPPLASRGCVVLNNPAMQTL 267
>gi|300856075|ref|YP_003781059.1| hypothetical protein CLJU_c29090 [Clostridium ljungdahlii DSM
13528]
gi|300436190|gb|ADK15957.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 220
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I+I+K + +E++ N L+ +K+ G K + GD + PEG YYI +
Sbjct: 70 TSIKIYKGKRAMELYGDNE-----LIGRFKVGLGRVPSGKKEKEGDLKTPEGTYYICY-- 122
Query: 112 LNPNSKYFLSINIGFPN 128
+NP SKY I +PN
Sbjct: 123 INPKSKYDYFFGISYPN 139
>gi|237804047|ref|ZP_04591632.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237805685|ref|ZP_04592389.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331026028|gb|EGI06084.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331026793|gb|EGI06848.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 88
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 19/76 (25%)
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA--------------SAGCYA 154
P++ Y LS++I +PN D A R G+ +MIHG + GC A
Sbjct: 6 PSNNYNLSMHISYPNITDSARARNEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIA 65
Query: 155 MNNKQMQEIYAIVRDS 170
M N M+E++ +V+D
Sbjct: 66 MKNNDMREVWDLVKDG 81
>gi|297171153|gb|ADI22163.1| uncharacterized protein conserved in bacteria [uncultured gamma
proteobacterium HF0200_24F15]
Length = 372
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFL-----SINIGFPNEFDKAHNRTGADLMIHGE 146
K GD++ P G Y I P K ++ I +PN+ D+ + RTG+ + +HG
Sbjct: 169 KRREGDQKTPIGVYRI--TGFIPGRKLHERYGPGALPIDYPNDLDQIYERTGSGIWLHGT 226
Query: 147 ---------CASAGCYAMNNKQMQEIYAIVRDS 170
AS GC ++ N+ + ++ DS
Sbjct: 227 EPGSVNRAPRASDGCLSLANRDFLSLLRLIGDS 259
>gi|194332931|ref|YP_002014791.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271]
gi|194310749|gb|ACF45144.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271]
Length = 122
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
Y I + A + L H RS AE+ S +L + + P + + K++ +L
Sbjct: 7 YTIAVVATLLCLAQRAH-RSKAVAAENSKSSSL-----QTLSLPVEADSLVVSKDDRLLH 60
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ ++ ++K Y I G K GD + PEG Y I NP S+Y LS++I
Sbjct: 61 LY-----SDGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRYTI--IGRNPQSRYHLSLSI 113
Query: 125 GFPNEFDK 132
E K
Sbjct: 114 SVRRETGK 121
>gi|261884737|ref|ZP_06008776.1| putative periplasmic protein [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 200
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 114 PNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGECASA----------GCYAMNNKQMQ 161
P Y+ +S N+ +PN FDK +RTG + IHG S GC M N +
Sbjct: 1 PEDTYYGPVSFNLSYPNLFDKLRDRTGGGIWIHGFPLSGNIREDVYKTKGCVVMPNDLLL 60
Query: 162 EIYAIVRD 169
+ +I++D
Sbjct: 61 NLESILKD 68
>gi|326317613|ref|YP_004235285.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374449|gb|ADX46718.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 437
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 96 GDEQAPEGFYYIGWNNLNPNS-KYFL---SINIGFPNEFDKAHNRTGADLMIHG------ 145
GD++ P G Y+I + L+P + K F ++ I +PN D + +TG+ + +HG
Sbjct: 218 GDQRTPLGVYFIT-SRLDPATLKDFYGAGALPINYPNPLDVSRGKTGSGIWLHGTPPEQF 276
Query: 146 ---ECASAGCYAMNNKQMQEIYAIV 167
++ GC A+ N ++ I V
Sbjct: 277 SRAPLSTDGCLALANPDLERILRTV 301
>gi|296134919|ref|YP_003642161.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12]
gi|295795041|gb|ADG29831.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12]
Length = 447
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 87 GTFGP-KIETGDEQAPEGFYYI----GWNNLNP-NSKYFLSINIGFPNEFDKAHNRTGAD 140
G FG K + GD + P G Y+I G +L P L++N +PNE+DK TG
Sbjct: 236 GKFGAGKTQIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLN--YPNEWDKQQGHTGFG 293
Query: 141 LMIHG---------ECASAGCYAMNNKQMQEIYA 165
+ +HG AS GC ++N + + A
Sbjct: 294 VWLHGTPPGSYARVPLASDGCVVLSNPDVLSLMA 327
>gi|120610990|ref|YP_970668.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1]
gi|120589454|gb|ABM32894.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1]
Length = 437
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 96 GDEQAPEGFYYIGWNNLNPNS-KYFL---SINIGFPNEFDKAHNRTGADLMIHGE----- 146
GD++ P G Y+I + L+P + K F ++ I +PN D + +TG+ + +HG
Sbjct: 218 GDQRTPLGVYFIT-SRLDPATLKDFYGAGALPINYPNPLDVSRGKTGSGIWLHGTPPEQF 276
Query: 147 ----CASAGCYAMNNKQMQEIYAIV 167
++ GC A+ N ++ I V
Sbjct: 277 SRAPLSTDGCLALANPDLERILRTV 301
>gi|322378789|ref|ZP_08053218.1| conserved hypothetical secreted protein [Helicobacter suis HS1]
gi|322380638|ref|ZP_08054790.1| conserved hypothetical secreted protein [Helicobacter suis HS5]
gi|321146960|gb|EFX41708.1| conserved hypothetical secreted protein [Helicobacter suis HS5]
gi|321148819|gb|EFX43290.1| conserved hypothetical secreted protein [Helicobacter suis HS1]
Length = 309
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG-- 145
G K+ GD+ P G Y I N ++ Y L++ +PN D TG + IHG
Sbjct: 83 IGMKVSEGDKATPIGVYQIIKKITNLSAYYGPLALVTNYPNPLDVVLKHTGHGIWIHGMP 142
Query: 146 ------ECASAGCYAMNNKQMQEIYAIVRD 169
+ GC A++NK +Q +VR+
Sbjct: 143 LKGDRDNSYTKGCIAIDNKILQNYDKLVRN 172
>gi|317154207|ref|YP_004122255.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944458|gb|ADU63509.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 419
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF----PNEFDKAHNRTG 138
C G K GD + PEG Y++G + + ++ L +I + PN D+ +TG
Sbjct: 63 CTTGQADGDKRVEGDLRTPEGVYFVG-HRIKRKLEWGLYGDIAYALNYPNPVDRIKGKTG 121
Query: 139 ADLMIHGECA------SAGCYAMNNKQMQEI 163
+ IHG + GC A+ M+++
Sbjct: 122 GGIWIHGRGKEFVPRDTQGCVALKVPDMRDV 152
>gi|319790530|ref|YP_004152163.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1]
gi|317115032|gb|ADU97522.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1]
Length = 355
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYY-IGWNNLNPNSKYFLSINIGFPNEFD-KAHNRTGAD 140
C G K+E GD++ PEG Y+ + W P + + +PN D K R G
Sbjct: 121 CITGKRPGDKLEEGDQRTPEGIYFPMYWETNLPPIYGIGAFPLNYPNLLDRKILKRNGHG 180
Query: 141 LMIHGEC-------ASAGCYAMNNKQMQEIYAIV 167
+ IHG ++ GC + N+ ++E+ ++
Sbjct: 181 IWIHGTNNPNRPPHSTNGCIVLKNEYLRELKKLI 214
>gi|328953401|ref|YP_004370735.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
gi|328453725|gb|AEB09554.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
Length = 215
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 30/143 (20%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
PTV+ + K L +++ LK Y + K+ GD PEG Y +
Sbjct: 72 PTVLLVHKESRKLTVFRGTTP-----LKTYPVVLGRNPRNDKLRQGDMCTPEGIYKVVCK 126
Query: 111 NLNPNSKYFLSINIGFPN-----EFDKAHNR--------TGADLMIHG----------EC 147
P++K+ I + +P +F +A R G ++ IHG E
Sbjct: 127 F--PHAKWNKFILLNYPTTKNWLKFAEAKKRGKIPITADIGGEIGIHGTEDDLKNLTGEN 184
Query: 148 ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC ++ NK + EIY ++ D
Sbjct: 185 WTLGCVSLRNKHLDEIYPLIEDG 207
>gi|258406579|ref|YP_003199321.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM
5692]
gi|257798806|gb|ACV69743.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM
5692]
Length = 304
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGAD 140
C+ + G K GD PEG Y++ K + L+ + +PN D+ +TG
Sbjct: 65 CSTGSSGGDKWREGDLATPEGVYFMTRRQTGLPEKLYGNLAFPLNYPNPVDRLRGKTGYG 124
Query: 141 LMIHGECA------SAGCYAMNN---KQMQEIYAIVRDSL 171
+ +HG + GC A+ K++ ++A+ R +
Sbjct: 125 IWLHGRGKPLVPRDTRGCIALRTPMLKRLSSLFALQRTPV 164
>gi|303246802|ref|ZP_07333079.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
JJ]
gi|302491819|gb|EFL51699.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
JJ]
Length = 741
Score = 39.3 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYI---GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
CA G K + GD + PEG Y+I + LN + L+ + FPN D +++G
Sbjct: 66 CATGQALGDKFKEGDLKTPEGVYFITRRKSSGLNFDLYGDLAFPLDFPNPADVLRHKSGH 125
Query: 140 DLMIHGE------CASAGCYAMNNKQMQEI 163
+ IHG + GC A++ + +
Sbjct: 126 GIWIHGRGHPITPYETQGCVALSMANIHRV 155
>gi|283852469|ref|ZP_06369737.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
gi|283572077|gb|EFC20069.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
Length = 456
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
CA G K + GD + PEG Y+I LN L+ + FPN D ++G
Sbjct: 67 CATGQELGDKFKEGDLKTPEGVYFITRRKTAGLNYELYGDLAFPLNFPNPADVVRRKSGH 126
Query: 140 DLMIHGEC------ASAGCYAMNNKQMQEI 163
+ IHG + GC A++ + +
Sbjct: 127 GIWIHGRGHAIIPYETQGCVALSTPDIHRV 156
>gi|315637664|ref|ZP_07892870.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478118|gb|EFU68845.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 323
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K GD++ PEG + + + Y ++ +PN FDK+ ++ G + IHG
Sbjct: 104 GDKFLEGDKKTPEGAFELVQKRTGLDQFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPF 163
Query: 146 ----ECASAGCYAMNNKQMQEI 163
E + GC A++N++++ +
Sbjct: 164 NGDREKFTQGCLALDNEKLETL 185
>gi|313681853|ref|YP_004059591.1| erfk/ybis/ycfs/ynhg family protein [Sulfuricurvum kujiense DSM
16994]
gi|313154713|gb|ADR33391.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfuricurvum kujiense DSM
16994]
Length = 317
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 16/147 (10%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWN 110
+++ K + +LE++ + + L K Y A++G G K GD + P G Y +
Sbjct: 61 SLLACSKEKGVLELYTPDAQKRFYLKKRY--SAFTGKNAGDKSVAGDLKTPIGIYTLVEK 118
Query: 111 NLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECASA-------GCYAMNNKQMQE 162
+ Y ++ +PN +D+ + G + +HG S GC A+NN + +
Sbjct: 119 KKRVDPFYGPMAFVTSYPNLYDRVRGKNGTGIWVHGVPLSGTRDPFTKGCIAINNNDLIQ 178
Query: 163 IYAIVRDS-----LRGNMQSHIQIQAF 184
+ + S + +++ IQ A+
Sbjct: 179 LDQTINPSNTLLIIDSSLKQGIQPTAY 205
>gi|157737873|ref|YP_001490557.1| hypothetical protein Abu_1640 [Arcobacter butzleri RM4018]
gi|157699727|gb|ABV67887.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 323
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K GD++ PEG + + + Y ++ +PN FDK+ ++ G + IHG
Sbjct: 104 GDKFLEGDKKTPEGAFELVQKRTGLDQFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPF 163
Query: 146 ----ECASAGCYAMNNKQMQEI 163
E + GC A++N++++ +
Sbjct: 164 NGDREKFTQGCLALDNEKLETL 185
>gi|83951624|ref|ZP_00960356.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83836630|gb|EAP75927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 185
Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I + K+E + +++ E L+ Y++ G K GD + PEG + I +
Sbjct: 51 LIELDKSERRMTVYR-----EGEALRSYEVALGFAPEGDKQIEGDGKTPEGEFRI--DRR 103
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGECA------------SAGCYAM 155
N S++ LS+ I +P D+A G D+ HG+ +AGC A+
Sbjct: 104 NDQSQFHLSLGINYPRAEDRARAAAQGVSPGGDIFFHGQPNKLPDILRRKGDWTAGCIAL 163
Query: 156 NNKQMQEIYAIV 167
N +++E++ +
Sbjct: 164 TNAEIEELWRVT 175
>gi|242309063|ref|ZP_04808218.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524487|gb|EEQ64353.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 331
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHG--- 145
G K + GD P G Y + N + Y L+ + +PN +DK RTG + IHG
Sbjct: 106 GHKQKEGDLATPIGVYSLQARLSNLDQYYGPLAFSTSYPNLYDKLQKRTGYGIWIHGMPL 165
Query: 146 -----ECASAGCYAMNNKQMQEIYAIV 167
E + GC A+ N + + I+
Sbjct: 166 NGNREELNTRGCIAIENNLLTSVDRII 192
>gi|254459078|ref|ZP_05072501.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
gi|207084349|gb|EDZ61638.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
Length = 322
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIG 108
+ ++ K ++ L ++ ++ + Y KEY A++G G KI+ GD + P G Y I
Sbjct: 61 YSNILTCDKEKSTLNLYVKDNNNSYGFKKEY--SAYTGKIKGDKIKEGDLKTPIGIYQIT 118
Query: 109 --WNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG-------ECASAGCYAMNN 157
+ N ++ L+ +PN +D + G + IHG + + GC A+NN
Sbjct: 119 KKLSTENKLDSFYGPLAFVTSYPNVYDTYRGKNGHGIWIHGLPTEQDRDEFTKGCIAINN 178
Query: 158 KQMQ 161
++
Sbjct: 179 PNIE 182
>gi|149926797|ref|ZP_01915056.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105]
gi|149824349|gb|EDM83567.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105]
Length = 422
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 16/83 (19%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYF-----LSINIGFPNEFDKAHNRTGADLMIHG- 145
K+ GD++ P G Y I L P K +++ I +PN +DK +TG + +HG
Sbjct: 203 KVREGDKRTPIGVYTI--TELLPKEKLTDFYGPIALPIDYPNAWDKRLGKTGYGIWLHGM 260
Query: 146 --------ECASAGCYAMNNKQM 160
AS GC + N+ +
Sbjct: 261 PKHYVSRPPKASDGCVVLANQDL 283
>gi|89094583|ref|ZP_01167521.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
gi|89081182|gb|EAR60416.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
Length = 402
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 33/156 (21%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIR-------IFKNENILEIWKRNVDAEY 74
+R L+D E P S L M K S H V+ +F+N+N +
Sbjct: 109 ARLLMD-MEKPSSNMLPADMMKLSPSQKHVIVVDTRLSRLFLFENQNGVP---------- 157
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN----PNSKYFLSINIGFPNEF 130
VL++++ G G K++ GD + P G Y+I N L P+ ++ I +PN +
Sbjct: 158 VLVEDFYASYGRGGTG-KVKQGDLKTPLGVYFIT-NRLEDEKLPSRYGSGALPINYPNVW 215
Query: 131 DKAHNRTGADLMIHGEC---------ASAGCYAMNN 157
D+ +TG + +HG AS GC ++ N
Sbjct: 216 DQRLGKTGNGIWLHGSPVETYSRPPKASEGCISLTN 251
>gi|218886565|ref|YP_002435886.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757519|gb|ACL08418.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 432
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K + L I++R+ + L Y +C G K GD + PEG Y++ N L
Sbjct: 47 LVAVDKEDQKLHIYERH--SPLKLAASY-VCTTGQATGDKQTAGDLKTPEGIYFVV-NKL 102
Query: 113 NPNSKY----FLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQE 162
+ ++ + +PN DK +TG+ + IH + + GC A+N + +
Sbjct: 103 SAGLDMEMYGGIAYTLNYPNPVDKLRRKTGSGIWIHSKGHDIVPRETKGCIALNRADIDK 162
>gi|158522215|ref|YP_001530085.1| hypothetical protein Dole_2204 [Desulfococcus oleovorans Hxd3]
gi|158511041|gb|ABW68008.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]
Length = 466
Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF---LSINIGFPNEFDKAH 134
K++K C+ GPK+ GD++ PEG Y+ + L+ + +PN D
Sbjct: 85 KQWK-CSTGENHGPKLVMGDKKTPEGIYFFTRKYTDSELAPIYGTLAFPLDYPNVLDHEA 143
Query: 135 NRTGADLMIHG------ECASAGCYAMNNKQMQEI 163
+ G+ + +HG + S GC A+ N + +
Sbjct: 144 EKNGSAIWLHGTNKVLKDNDSNGCVALENGSIDAL 178
>gi|308272917|emb|CBX29521.1| hypothetical protein N47_J05020 [uncultured Desulfobacterium sp.]
Length = 233
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 23 RSLIDKAEH-PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA-------EY 74
+ L D +E+ +SE +I+ + + H + +E I E K+ + A
Sbjct: 35 KKLNDLSEYIKVSEKMILPILNRYADKNHIRKWQKMVDETIAESKKKGIPAIIVNKSERT 94
Query: 75 VLLKEYKICAWSGTFG-------PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
++L + + W+ G K +GD PEG Y I S+Y ++ + +P
Sbjct: 95 LVLYKNGVPVWTYNVGLGRNGSLDKQRSGDNSTPEGKYRI--TQKKSESRYHKALLLNYP 152
Query: 128 NEFDK-------------AHNRTGADLMIHGECASA---GCYAMNNKQMQEIYAIV 167
NE D+ A G + IHG ++ GC AM+N ++ I+ IV
Sbjct: 153 NEEDRKNFILAKKNGLIPAKAGIGGLIEIHGGGRNSMTYGCIAMDNSKIDHIFKIV 208
>gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
gi|71846177|gb|AAZ45673.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
Length = 431
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 87 GTFGP-KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG-----FPNEFDKAHNRTGAD 140
G G K+ GD++ P G Y++ N P K G +PNE+DK R G+
Sbjct: 202 GKLGAEKLVEGDKKTPVGVYHVTANL--PKQKLADLYGTGAYPLNYPNEWDKRQGRGGSG 259
Query: 141 LMIHGEC---------ASAGCYAMNNKQMQEI 163
+ +HG AS GC + N+ + +
Sbjct: 260 IWLHGTPSNTFARPPRASDGCVVLTNQDLDVV 291
>gi|89900141|ref|YP_522612.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118]
gi|89344878|gb|ABD69081.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118]
Length = 414
Score = 38.1 bits (87), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 96 GDEQAPEGFYYIGWNNLNPNS-KYFL---SINIGFPNEFDKAHNRTGADLMIHGE----- 146
GD + P G Y+I +NL+P S K F ++ I +PN D +TG + +HG
Sbjct: 196 GDLRTPMGVYFIT-SNLDPKSLKDFYGSGALPINYPNVLDNLRGKTGGGIWLHGTPPGQF 254
Query: 147 ----CASAGCYAMNNKQMQEIYAIV 167
A+ GC + N + + V
Sbjct: 255 SRPPLATDGCVVLANPDLMALIRTV 279
>gi|171676525|ref|XP_001903215.1| hypothetical protein [Podospora anserina S mat+]
gi|170936329|emb|CAP60987.1| unnamed protein product [Podospora anserina S mat+]
Length = 353
Score = 38.1 bits (87), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI---LEIWKRNVDAEYVLLKE 79
RS++D EH +S+NL+ +M + + P V+ + ++ L + + DA VLL+
Sbjct: 89 RSIVDWEEHGISDNLMTTMSELLSVPLPSEVVAAQQKCHVAYHLSLLQEPSDAAVVLLES 148
Query: 80 YKICAWSGTFG 90
I + SGT G
Sbjct: 149 RSIISGSGTTG 159
>gi|291288878|ref|YP_003505694.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM
12809]
gi|290886038|gb|ADD69738.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM
12809]
Length = 418
Score = 38.1 bits (87), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 31/144 (21%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG-----------FPNEFDKAHNRTG 138
G K GDE+ PEG Y++ L+P + +G +PN D+ +TG
Sbjct: 71 GDKRVQGDEKTPEGVYFVT-GFLSPEKLRAMYGEVGKQYGTGAYPLSYPNLKDRLQGKTG 129
Query: 139 ADLMIHGECAS------AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192
+ +HG S GC A +N+++ + M +I++ P +T +
Sbjct: 130 GGIWLHGIDPSRNVPVTKGCVAFDNEKLTK------------MADYIKVGT-PVIVTEEG 176
Query: 193 MQLYQNNPNYSFWNMLKLGHDYFE 216
++ ++ F + KL DY E
Sbjct: 177 LKGTLDDLRAHFESAKKLVTDYME 200
>gi|78777576|ref|YP_393891.1| hypothetical protein Suden_1379 [Sulfurimonas denitrificans DSM
1251]
gi|78498116|gb|ABB44656.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
1251]
Length = 321
Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 81 KICAWSGTF-GPKIETGDEQAPEGFYYIGW-----NNLNPNSKYFLSINIGFPNEFDKAH 134
K A++G G KI+ GD + P G Y I L+P F + +PN +D
Sbjct: 90 KYSAFTGKMKGDKIKEGDLRTPTGIYQITQKLSKETKLDPFYGPFAFVT-SYPNVYDTYK 148
Query: 135 NRTGADLMIHGECA------SAGCYAMNNKQMQ 161
+ G+ + IHG A + GC A+NN ++
Sbjct: 149 GKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIE 181
>gi|85859285|ref|YP_461487.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85722376|gb|ABC77319.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 498
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 23/94 (24%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF----------LSINIGFPNEFDK 132
C+ G K+ +GD + PEG ++ P K+ L+ + +PN DK
Sbjct: 94 CSTGKNQGDKLTSGDARTPEGIFF-------PTRKFTDDELTPIYGTLAFTLDYPNYLDK 146
Query: 133 AHNRTGADLMIHG------ECASAGCYAMNNKQM 160
+ G ++ IHG S GC ++N +
Sbjct: 147 RTGKNGHNIWIHGTDKTLKSFQSNGCIVLDNSDI 180
>gi|152990313|ref|YP_001356035.1| hypothetical protein NIS_0564 [Nitratiruptor sp. SB155-2]
gi|151422174|dbj|BAF69678.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 353
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 23/135 (17%)
Query: 50 HP---TVIRIFKNENILE-IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
HP +VI + KNE L+ I+ +N + + + C G K+E GD++ P G Y
Sbjct: 83 HPNSFSVIVVSKNEQKLKLIYGKNGFIQTIEIP----CITGKRQGDKLEAGDKKTPNGVY 138
Query: 106 YIGWNNLNPNSKYFLSINIG-----FPNEFDKA-HNRTGADLMIHGE-------CASAGC 152
+ W P K +G +PN DK +++TG + +H +S GC
Sbjct: 139 FPKW--FIPQEKLSKIYGVGAFPLNYPNIIDKKIYHKTGDGIWLHATNDDKRKPFSSNGC 196
Query: 153 YAMNNKQMQEIYAIV 167
+ N+ +I V
Sbjct: 197 VVVTNENFTKIKPFV 211
>gi|291279367|ref|YP_003496202.1| hypothetical protein DEFDS_0974 [Deferribacter desulfuricans SSM1]
gi|290754069|dbj|BAI80446.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 413
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 33/170 (19%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R I L + +F G S + + +S++ + + K + F V+++ KN+
Sbjct: 2 RKVIFLLIILVFYAGLSFSAIIENIFSKGISDDTVFVVDKSQKKLF---VVQV-KNDMPE 57
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY----YIGWNNLNP---NS 116
IW+ N +LL E + G K GD++ PEG Y +I N L+
Sbjct: 58 IIWQYNN----ILLGEME--------GDKQVEGDKKTPEGIYRVVSFIPKNQLSEIYGEG 105
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIH------GECASAGCYAMNNKQM 160
Y L+ +PN DK +TG + IH G+ + GC A++N +
Sbjct: 106 AYPLN----YPNPVDKIFGKTGYGIWIHGLKEDSGKKYTQGCVALHNGDL 151
>gi|78358053|ref|YP_389502.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220458|gb|ABB39807.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 442
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 29/167 (17%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKA--EHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
++L+F F L H + A E P +++ K R + F ++++ + L
Sbjct: 23 SLLIFLTFCILPAAHAHAGGWNAAIGELPHLPPRFVAVDKSRQTLF------LYRHSSPL 76
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSKYFL 120
E V A Y C G K GD + PEG Y++ L+ + +
Sbjct: 77 E-----VSATYT-------CTTGQATGDKQVEGDLRTPEGVYFVEHRIDKGLDWDLYGGI 124
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQ 161
+ + +PN D +TG + IHG + GC A+N ++
Sbjct: 125 AYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADIE 171
>gi|296273934|ref|YP_003656565.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM
7299]
gi|296098108|gb|ADG94058.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM
7299]
Length = 320
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG-- 145
G K GD + P G Y + L +++ L++ +PN FDK+ N+ G + IHG
Sbjct: 101 GDKFLEGDLKTPIGAYKLT-RKLTKLDQFYGPLALVTNYPNTFDKSLNKEGHGIWIHGMP 159
Query: 146 --ECAS---AGCYAMNNKQM 160
E S GC A++N+ +
Sbjct: 160 YEESRSDYTKGCIALDNESL 179
>gi|303326005|ref|ZP_07356448.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3]
gi|302863921|gb|EFL86852.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3]
Length = 385
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGW---NNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
C G K E D + PEG Y++ + + L+ ++ + +PN D+ +TG
Sbjct: 67 CVTGQLAGDKQELNDLRTPEGIYFVEYKIASGLDFKEYGGIAYTLNYPNPVDRLRGKTGH 126
Query: 140 DLMIH----GECASAGCYAMNNKQMQEI 163
+ IH G + GC A+ K++ +
Sbjct: 127 GIWIHSKGFGLVPTRGCVAIGLKEIDTV 154
>gi|229496449|ref|ZP_04390165.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
35406]
gi|229316677|gb|EEN82594.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
35406]
Length = 319
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIG-------WNNLNPNSKYFLSINIGFPNEF 130
KEY CA + +G K + GD + PEGF+Y G W + N Y + + F
Sbjct: 122 KEY-TCACARNYGHKAKKGDCRTPEGFFYAGETFDSTDWLYTDDNG-YTSPVRGQYGPRF 179
Query: 131 DKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
+ + IHG CA S GC ++N + E+ V+ ++
Sbjct: 180 IRIKGDKNLPVGIHGTCAPWALGRRCSHGCVRIHNDNILELVKYVQPNM 228
>gi|148978670|ref|ZP_01815073.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3]
gi|145962208|gb|EDK27491.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3]
Length = 242
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA-- 133
+++E++I G K GD + PEG Y + + + S+++ S++I +P D+
Sbjct: 124 VVQEFRIALGKEPKGHKRFEGDNRTPEGEYTLDY--IMERSEFYRSVHINYPRSSDRQWA 181
Query: 134 ---HNRTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
G ++ IH GE S GC A+ N+ M E +V+
Sbjct: 182 EENDVDPGGNIKIHGIKNGERRSPGFIQSFDWTDGCIALTNQDMDEFIQLVK 233
>gi|321471717|gb|EFX82689.1| hypothetical protein DAPPUDRAFT_316536 [Daphnia pulex]
Length = 479
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 92 KIETGDEQAPEGFYYIGWN-NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
+I D P G Y+I + N S F+ N+ + K + + D+ G CA
Sbjct: 173 EIRLADASLPSGMYWIDPDGNRVGGSPIFVYCNMTTGSTVIKHDSESPVDV---GHCAGV 229
Query: 151 GCYAMN---NKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
GCY+ N M+++ A+ + S + P + NN YS+WN
Sbjct: 230 GCYSRTVNYNATMEQLTALAKCSAECHQSIRYDCNRAPLEL---------NNIAYSWWND 280
Query: 208 LKLGHDYF 215
YF
Sbjct: 281 RSGSARYF 288
>gi|220903383|ref|YP_002478695.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867682|gb|ACL48017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 822
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGW---NNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
C G K D + PEG Y++ + + L+ ++ + +PN DK +TG
Sbjct: 81 CTTGQLTGDKKVLNDLRTPEGVYFVEYKIASGLDFKEYGGIAYTLNYPNPVDKLRGKTGH 140
Query: 140 DLMIHGE------CASAGCYAMNNKQMQEI 163
+ IH + ++ GC A+ K++ E+
Sbjct: 141 GIWIHSKGLGIEPLSTRGCVAIGLKEIDEV 170
>gi|84393864|ref|ZP_00992608.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
12B01]
gi|84375511|gb|EAP92414.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
12B01]
Length = 259
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD---- 131
+++E++I G K GD + PEG Y + + + S ++ S++I +P D
Sbjct: 141 VVQEFRIALGKQPKGHKRFEGDNRTPEGKYQLDY--VMEESDFYRSVHINYPQSSDMQWA 198
Query: 132 -KAHNRTGADLMIH----GECASA----------GCYAMNNKQMQEIYAIVR 168
K G ++ IH GE S GC A+ N+ M E +V+
Sbjct: 199 QKNDVDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCIALTNQDMDEFIQLVK 250
>gi|171058352|ref|YP_001790701.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6]
gi|170775797|gb|ACB33936.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6]
Length = 642
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFL---SINIGFPNEFDKAHNRTGADLMIHGEC- 147
K E GD++ P G YYI F ++ + +PN+ D+ RTGA++ +HG
Sbjct: 420 KREEGDQRTPLGTYYITSKLDGKQLGDFYGAGALPLNYPNDHDRHLGRTGANIWLHGTPS 479
Query: 148 --------ASAGCYAMNNKQM 160
A+ GC + N +
Sbjct: 480 AQFARAPRATNGCIVLANDDL 500
>gi|291613141|ref|YP_003523298.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
gi|291583253|gb|ADE10911.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
Length = 388
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 32/116 (27%)
Query: 92 KIETGDEQAPEGFYYI----GWNNLNP---NSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
K+ GD++ P G Y++ G + + S Y LS +PNE+DK G + +H
Sbjct: 166 KVSEGDQKTPLGVYFVNGHLGKDKITDFYGPSAYPLS----YPNEWDKREGHDGHGIWLH 221
Query: 145 GEC---------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
G AS GC + N + + SH+QI P + SK
Sbjct: 222 GTPPDTFSRPPRASNGCVVLANNDLNY------------LGSHLQIGITPVIIASK 265
>gi|291276929|ref|YP_003516701.1| hypothetical protein HMU07090 [Helicobacter mustelae 12198]
gi|290964123|emb|CBG39967.1| putative periplasmic protein [Helicobacter mustelae 12198]
Length = 331
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 15/85 (17%)
Query: 90 GPKIETGDEQAPEGFYYIG--WNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG 145
G K + GD+ P G Y L+P Y+ ++ +PN +D NRTG+ + +HG
Sbjct: 106 GAKQKKGDKVTPIGVYNFVELLEKLDP---YYGPMAFATNYPNTYDNLLNRTGSGIWLHG 162
Query: 146 --------ECASAGCYAMNNKQMQE 162
+ + GC A+ N +QE
Sbjct: 163 LPLNGDRKDQNTKGCIAVENNLIQE 187
>gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601474|ref|YP_965874.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4]
gi|46450770|gb|AAS97416.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561703|gb|ABM27447.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4]
gi|311235007|gb|ADP87861.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris RCH1]
Length = 429
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 73 EYVLLKEYKICAWSGTF--------GPKIETGDEQAPEGFYYIGW---NNLNPNSKYFLS 121
+++ + + A GTF G K+ GD + PEG Y+I + L+ ++
Sbjct: 54 RFLIFERHSPLALRGTFPCTTGQADGDKVAEGDLRTPEGIYFIEGKRTSGLDYGLYGGIA 113
Query: 122 INIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQEI 163
+ +PN D+ +++G + IH + + GC A+N + +
Sbjct: 114 YTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDIDAL 161
>gi|317050283|ref|YP_004111399.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
gi|316945367|gb|ADU64843.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
Length = 474
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY---IGWNNLNP 114
KN+ + I +R + + +L+ Y + G K GDE+ P G Y+ N P
Sbjct: 216 KNQQVTYIIQRQGEG-FTVLEAYH-SSTGRIPGEKQRRGDEKTPTGIYFPVSKMTTNQMP 273
Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIHG 145
+ + +PN DK RTG+ + +HG
Sbjct: 274 QRYGAYAFPVNYPNHLDKHLGRTGSGIWLHG 304
>gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5]
gi|2982913|gb|AAC06531.1| putative protein [Aquifex aeolicus VF5]
Length = 397
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF-----LSINIGFPNEFDKAHNRTGADLMIH 144
G K GD + PEG YY + P + +++ + +PN +DK +TG+ + +H
Sbjct: 170 GDKEREGDGKTPEGVYY--FTRFIPPEQLSEIYGGIAVALNYPNPYDKLLGKTGSGIWLH 227
Query: 145 G 145
G
Sbjct: 228 G 228
>gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens]
gi|53754810|emb|CAH16297.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens]
Length = 162
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + + IL I K ++K +K+ G K + GD + P G Y G +
Sbjct: 31 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVGKK-KAGDNKTPIGLY--GLAHPR 82
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYA-MNN 157
++++ + I I +P + A TG D+ IHG S G + +NN
Sbjct: 83 KSNQFKVFIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNN 127
Searching..................................................done
Results from round 2
>gi|254780589|ref|YP_003065002.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040266|gb|ACT57062.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 239
Score = 387 bits (994), Expect = e-106, Method: Composition-based stats.
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE
Sbjct: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL
Sbjct: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ
Sbjct: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI
Sbjct: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
>gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110]
gi|27348439|dbj|BAC45457.1| blr0192 [Bradyrhizobium japonicum USDA 110]
Length = 526
Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 147/237 (62%), Gaps = 4/237 (1%)
Query: 5 YNILLFALFIFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
++ L + L GC + + KA P+ L+ +M +K P ++R+FK E
Sbjct: 16 ASVALLTASVLLAGCDTDQVSLATNAKANQPVPPKLLAAMVEKDMDLQSPILVRLFKQEA 75
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+WK+ + ++ LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS
Sbjct: 76 ELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPGQMNPQSAYYLS 135
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
N G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S Q Q+
Sbjct: 136 FNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESF-FGGQKAFQL 194
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
QA+PF+MT NM ++NNPN FW M+K G+D+FE QEP + K+YVF +T
Sbjct: 195 QAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVDFCEKKYVFDAAKT 251
>gi|115522169|ref|YP_779080.1| hypothetical protein RPE_0139 [Rhodopseudomonas palustris BisA53]
gi|115516116|gb|ABJ04100.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisA53]
Length = 481
Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats.
Identities = 107/234 (45%), Positives = 145/234 (61%), Gaps = 4/234 (1%)
Query: 8 LLFALFIFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
++ A + L GC+ + KA P+S LI MQ K P ++R+FK E LE
Sbjct: 14 VVLAAGVALAGCNSDEISLANNAKANQPVSPKLIAEMQSKDMDLQAPMLVRLFKQEAELE 73
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK+ +Y LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N
Sbjct: 74 VWKQTRSGQYALLKTYPICRWSGDLGPKVREGDRQAPEGFYSISPGQMNPQSAYYLSFNT 133
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S Q Q+QA+
Sbjct: 134 GYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESF-FGGQRAFQLQAY 192
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PF+MT NM +++NPN FW M+K G+D+FE QEP ++ +YVF T
Sbjct: 193 PFKMTPANMARHRSNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEARYVFDPAPT 246
>gi|209883239|ref|YP_002287096.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5]
gi|209871435|gb|ACI91231.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5]
Length = 483
Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 146/231 (63%), Gaps = 2/231 (0%)
Query: 8 LLFALFIFLNGCH-HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
A + L GC+ + S KA P+ E L+ M+ K P ++R+FK E LE+W
Sbjct: 14 AALATSVLLAGCNGDTLSRSAKANKPIPEKLLSDMEAKNMDKGSPMLVRLFKQEAELEVW 73
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N+G+
Sbjct: 74 KQDRSGRFALLKTYPICRWSGDLGPKIREGDRQAPEGFYSITPAQMNPASAYYLSFNMGY 133
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S Q+ Q+QA+PF
Sbjct: 134 PNAYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESF-FGGQTAFQVQAYPF 192
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
RMT +NM +++NPN +FW MLK G+D FE EP + + K+YVF
Sbjct: 193 RMTPQNMARHRDNPNMAFWRMLKEGNDIFEVTRTEPKVDVCEKKYVFDAEP 243
>gi|110635389|ref|YP_675597.1| hypothetical protein Meso_3060 [Mesorhizobium sp. BNC1]
gi|110286373|gb|ABG64432.1| protein of unknown function DUF949 [Chelativorans sp. BNC1]
Length = 439
Score = 361 bits (928), Expect = 4e-98, Method: Composition-based stats.
Identities = 111/237 (46%), Positives = 147/237 (62%), Gaps = 3/237 (1%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRS--LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
M +R+ + L GC S AE L + ++ K S P ++R+FK
Sbjct: 10 MKSRFACAVLLPAFILVGCSGSLEDLAPKAAERKLPPEVTEIIKAKGMSTNAPIMMRVFK 69
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E +LE+WK+ D Y L+K Y+IC WSG GPK GD QAPEGFY I +NPNS Y
Sbjct: 70 EEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAPEGFYTIRPQQMNPNSSY 129
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
LS NIGFPN +D+A+ RTG LM+HG C+SAGCY+M ++Q++EIYA RD+ RG Q
Sbjct: 130 HLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVEEIYAFARDAFRGG-QEA 188
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
Q QAFPFRMT++NM Y+N+PNY FW MLK G+D+FE P + + +YVF +
Sbjct: 189 FQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPPKVDVCEARYVFNR 245
>gi|192288940|ref|YP_001989545.1| hypothetical protein Rpal_0510 [Rhodopseudomonas palustris TIE-1]
gi|192282689|gb|ACE99069.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
TIE-1]
Length = 478
Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 4 RYNILLFALFIF--LNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
R +L AL L GC+ + + KA P+ L+ +MQ+K P ++R+FK
Sbjct: 8 RALMLTAALATMPLLAGCNSDQMALATNAKANQPVPPKLVAAMQEKNMDLQSPILVRLFK 67
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y
Sbjct: 68 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 127
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q
Sbjct: 128 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESF-FGGQRA 186
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + +YVF
Sbjct: 187 FQLQAYPFKMTPANFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 246
>gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009]
gi|39647432|emb|CAE25953.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 491
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 109/240 (45%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 4 RYNILLFALFIF--LNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
R +L AL L GC+ + + KA P+S L+ +MQ+K P ++R+FK
Sbjct: 21 RALMLTAALATMPLLAGCNSDQMALATNAKANQPVSPKLVAAMQEKNMDLQSPILVRLFK 80
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y
Sbjct: 81 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 140
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q
Sbjct: 141 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESF-FGGQRA 199
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + +YVF
Sbjct: 200 FQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 259
>gi|90422051|ref|YP_530421.1| hypothetical protein RPC_0527 [Rhodopseudomonas palustris BisB18]
gi|90104065|gb|ABD86102.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisB18]
Length = 477
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 106/247 (42%), Positives = 146/247 (59%), Gaps = 10/247 (4%)
Query: 1 MTNRYNI------LLFALFIFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHP 51
M +R + + A + L GC+ + KA P+ L+ MQ K P
Sbjct: 1 MIDRTLVRALVTSVALATGVMLAGCNSDEISLANNAKANQPVPPKLVAEMQTKDMDLQAP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
++R+FK E LE+WK+ ++ LLK Y IC WSG GPK+ GD QAPEGFY I
Sbjct: 61 MLVRLFKQEAELEVWKQTRSGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYNITPAQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
+NP S Y+LS N G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S
Sbjct: 121 MNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESF 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
Q Q+QA+PF+MT NM ++NNPN FW M+K G+D+FE QEP ++ +Y
Sbjct: 181 -FGGQRAFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEAKY 239
Query: 232 VFFKGQT 238
VF
Sbjct: 240 VFDPATP 246
>gi|316931931|ref|YP_004106913.1| putative transcriptional regulatory protein [Rhodopseudomonas
palustris DX-1]
gi|315599645|gb|ADU42180.1| putative exported protein; putative transcriptional regulatory
protein at C-terminal [Rhodopseudomonas palustris DX-1]
Length = 477
Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats.
Identities = 107/240 (44%), Positives = 146/240 (60%), Gaps = 6/240 (2%)
Query: 4 RYNILLFALFIF--LNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
R ++ AL L GC+ + + KA P+ L+ +MQ+K P ++R+FK
Sbjct: 8 RALLVTAALATMPLLAGCNSDQMALATNAKASQPVPPKLVAAMQEKNMDLQSPILVRLFK 67
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y
Sbjct: 68 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 127
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q
Sbjct: 128 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESF-FGGQRA 186
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + ++YVF
Sbjct: 187 FQLQAYPFKMTPANFAKHRNNPNMPFWKMLKQGYDHFEVTRQEPKVDFCEQKYVFDAAPP 246
>gi|299132837|ref|ZP_07026032.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2]
gi|298592974|gb|EFI53174.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2]
Length = 475
Score = 357 bits (918), Expect = 5e-97, Method: Composition-based stats.
Identities = 108/244 (44%), Positives = 148/244 (60%), Gaps = 8/244 (3%)
Query: 1 MTNRYNI------LLFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTV 53
M NR I A L GC+ + KA P+ E L+ M+ K P +
Sbjct: 1 MINRSLIRALMVSAALATGTLLAGCNGENLAQSAKATKPIPEKLLAEMEAKNMDKGSPIL 60
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+R+FK E+ LE+WK++ + LLK Y IC WSG GPKI GD Q PEGFY I +N
Sbjct: 61 VRLFKQESELEVWKQDRSGRFALLKTYAICRWSGDLGPKIREGDRQTPEGFYSITPGQMN 120
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
P S Y+LS N+G+PN +D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S
Sbjct: 121 PASAYYLSFNMGYPNAYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESF-F 179
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+ Q+QA+PFRMT +NM Y++NPN FW MLK G+D FE EP + + +K+YVF
Sbjct: 180 GGQTAFQVQAYPFRMTPQNMAKYRDNPNMPFWRMLKEGNDIFEVTKTEPKVDVCDKKYVF 239
Query: 234 FKGQ 237
Sbjct: 240 DAEP 243
>gi|148258745|ref|YP_001243330.1| transcriptional regulator [Bradyrhizobium sp. BTAi1]
gi|146410918|gb|ABQ39424.1| putative exported protein of unknown function with transcriptiona
regulatory protein domain (C-term) [Bradyrhizobium sp.
BTAi1]
Length = 494
Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats.
Identities = 106/247 (42%), Positives = 148/247 (59%), Gaps = 10/247 (4%)
Query: 1 MTNRYNILLFAL------FIFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHP 51
M NR + + L GC+ + + KA P+ L+ ++ +K P
Sbjct: 1 MINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVATIAEKDMDTQSP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
++R+FK E LE+WK++ ++ LLK Y IC WSG GPK+ GD QAPEGFY I +
Sbjct: 61 ILVRVFKQEAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
+NP S Y+LS N G+PN FDKA RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S
Sbjct: 121 MNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESF 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
Q Q QA+PFRMT NM ++NNPN FW M+K G+D+FE QEP + K+Y
Sbjct: 181 -FGGQRAFQFQAYPFRMTPMNMARHRNNPNMPFWRMIKEGYDHFEVTRQEPKVDFCEKKY 239
Query: 232 VFFKGQT 238
VF +
Sbjct: 240 VFNAQKP 246
>gi|85713798|ref|ZP_01044788.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A]
gi|85699702|gb|EAQ37569.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A]
Length = 491
Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats.
Identities = 109/242 (45%), Positives = 147/242 (60%), Gaps = 6/242 (2%)
Query: 2 TNRYNILLFAL--FIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRI 56
T R + L AL L GC+ + + KA P+ L+ +M K P +IR+
Sbjct: 6 TARAIMTLAALTGGTLLAGCNTDDASLASNAKANRPVPPKLVAAMTAKDMELQSPILIRL 65
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK E LE+WK++ ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S
Sbjct: 66 FKQEAELEVWKQDRSGKFALLKIYPICRWSGDLGPKTREGDRQAPEGFYSITPAQMNPRS 125
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
Y+LS N G+PNEFDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q
Sbjct: 126 SYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESF-FGGQ 184
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
Q+QA+PFRMT+ N+ ++NNPN FW M+K G+D+FE QEP + +YVF
Sbjct: 185 RAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCEHKYVFDPA 244
Query: 237 QT 238
Sbjct: 245 PP 246
>gi|153008240|ref|YP_001369455.1| hypothetical protein Oant_0905 [Ochrobactrum anthropi ATCC 49188]
gi|151560128|gb|ABS13626.1| protein of unknown function DUF949 [Ochrobactrum anthropi ATCC
49188]
Length = 412
Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats.
Identities = 113/237 (47%), Positives = 149/237 (62%), Gaps = 4/237 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M R IL + L GC S L +AE PL E ++ M+ K + P ++RIF
Sbjct: 1 MKIRTAILGSVMATALLAGCQGSSVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E LE+WK+ + +Y + Y IC WSG GPK GD QAPEGFY + +NPNS
Sbjct: 61 KEEGTLEVWKQKNNGKYDQIASYDICKWSGKLGPKYIEGDRQAPEGFYNVRPAQMNPNSS 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+LS NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLSFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
QIQAFPFRMT+ NM Y+++PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 DFQIQAFPFRMTAANMARYKSDPNYSFWKMLKQGYDSFEVTKVPPKVDVCEKRYVFN 236
>gi|239833077|ref|ZP_04681406.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825344|gb|EEQ96912.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 417
Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats.
Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 4/237 (1%)
Query: 1 MTNRYNIL-LFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M R IL L GC S L +AE PL E ++ M+ K + P ++RIF
Sbjct: 1 MKIRTAILGSLLATTLLAGCQGSSVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NPNS
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPNSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
QIQAFPFRMT+ NM Y+++PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 DFQIQAFPFRMTAANMARYKSDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFN 236
>gi|92116107|ref|YP_575836.1| hypothetical protein Nham_0486 [Nitrobacter hamburgensis X14]
gi|91799001|gb|ABE61376.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14]
Length = 502
Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats.
Identities = 105/234 (44%), Positives = 143/234 (61%), Gaps = 4/234 (1%)
Query: 8 LLFALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ A FL GC+ + + + KA P+ L+ +M +K P +IR+FK E LE
Sbjct: 29 AVLASGAFLAGCNGNDASLASNAKANQPVPPKLVAAMTEKDMELQSPILIRLFKQEAELE 88
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK+N ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S Y+LS N
Sbjct: 89 VWKQNRSGKFALLKTYPICRWSGDLGPKTREGDRQAPEGFYSISPAQMNPRSAYYLSFNT 148
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN FDK+ RTG++LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q Q QA+
Sbjct: 149 GYPNAFDKSLGRTGSELMVHGDCSSRGCYAMTDEQIAEIYALGRESF-FGGQHAFQFQAY 207
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PF MT N+ ++NNPN FW M+K G D+FE HQ P ++ +YVF
Sbjct: 208 PFHMTPVNLAKHRNNPNMPFWKMIKEGSDHFEVTHQAPKVEFCEHKYVFDPAPP 261
>gi|91974778|ref|YP_567437.1| hypothetical protein RPD_0298 [Rhodopseudomonas palustris BisB5]
gi|91681234|gb|ABE37536.1| protein of unknown function DUF949 [Rhodopseudomonas palustris
BisB5]
Length = 487
Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 137/224 (61%), Gaps = 4/224 (1%)
Query: 18 GCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
GC+ + + KA P+ L+ MQ K P ++R+FK E LE+WK++ +
Sbjct: 24 GCNSDQMSLATNAKANQPVPPKLVAEMQAKNMDLQSPILVRLFKQEAELEVWKQDRTGVF 83
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N G+PN FDK+
Sbjct: 84 ALLKSYPICRWSGDLGPKVREGDRQAPEGFYAISPGQMNPQSSYYLSFNTGYPNAFDKSL 143
Query: 135 NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194
RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S Q Q+QA+PF+MT N
Sbjct: 144 GRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESF-FGGQRAFQLQAYPFKMTPVNFA 202
Query: 195 LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
++NNPN FW MLK G+D+FE QEP + +YVF
Sbjct: 203 KHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 246
>gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255]
gi|74419459|gb|ABA03658.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
Length = 492
Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats.
Identities = 110/247 (44%), Positives = 151/247 (61%), Gaps = 10/247 (4%)
Query: 1 MTNR---YNILLFALFI---FLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHP 51
M NR I+ A+ + L GC+ + + KA P+S L+ +M K P
Sbjct: 1 MINRSIARTIMTSAVLMGSALLAGCNTDDASLASNAKANRPVSPKLVAAMTAKDMELQSP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+IR+FK E LE+WK++ ++ LLK Y IC WSG GPK GD QAPEGFY I
Sbjct: 61 ILIRLFKQEAELEVWKQDRSGKFALLKSYPICRWSGDLGPKTREGDRQAPEGFYSITPAQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
+NP S Y+LS N G+PNEFDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S
Sbjct: 121 MNPRSSYYLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESF 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
Q Q+QA+PFRMT+ N+ ++NNPN FW M+K G+D+FE QEP + ++Y
Sbjct: 181 -FGGQRAFQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCERKY 239
Query: 232 VFFKGQT 238
VF
Sbjct: 240 VFDPAPP 246
>gi|118592084|ref|ZP_01549478.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614]
gi|118435380|gb|EAV42027.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614]
Length = 424
Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats.
Identities = 108/240 (45%), Positives = 149/240 (62%), Gaps = 4/240 (1%)
Query: 2 TNRYNILLFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
T R L L L C + +KA+ P+S ++ M S P +IRIFK
Sbjct: 25 TARIGAALL-LAGVLVACQGDEFSAGPNKAQLPVSASIKRKMNDLNMSSSSPIMIRIFKE 83
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+WK+ +Y LL E++IC WSG GPK + GD QAPEGFY I +NPNS Y
Sbjct: 84 ESALEVWKQTRTGKYQLLDEFEICKWSGELGPKFKEGDRQAPEGFYEITPALMNPNSSYH 143
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ N+G+PN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G Q
Sbjct: 144 LAFNLGYPNSYDRAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGG-QRSF 202
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
Q+QAFPFRMT +NM ++++ + FW MLK G+D+FE P I + K+YVF +
Sbjct: 203 QVQAFPFRMTPENMARHRDSEHMEFWQMLKTGYDHFEVTQTPPQISVCEKKYVFDATTLV 262
>gi|319781235|ref|YP_004140711.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167123|gb|ADV10661.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 432
Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats.
Identities = 107/234 (45%), Positives = 149/234 (63%), Gaps = 5/234 (2%)
Query: 4 RYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R IL+ AL + GC++S + +A PL + ++ M+ K + RIFK E
Sbjct: 7 RTGILIAALGV--AGCNNSSMKDFAPEANKPLPDKILADMRAKGMVRTSSVMARIFKEEG 64
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY + +NP S Y LS
Sbjct: 65 KLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPAQMNPRSNYHLS 124
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ RTG++LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ QI
Sbjct: 125 FNIGYPNAYDRANGRTGSNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG-QTEFQI 183
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
QAFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF +
Sbjct: 184 QAFPFRMTAANMARYRNDPNYDFWKMLKVGYDNFEITKVPPKVDVCEKRYVFNQ 237
>gi|146337733|ref|YP_001202781.1| putative exported protein transcriptiona regulatory protein at
C-terminal [Bradyrhizobium sp. ORS278]
gi|146190539|emb|CAL74541.1| conserved hypothetical protein; putative exported protein; putative
transcriptiona regulatory protein at C-terminal
[Bradyrhizobium sp. ORS278]
Length = 501
Score = 351 bits (902), Expect = 4e-95, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 17 NGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
GC+ + + KA P+ L+ ++ +K P ++R+FK E LE+WK++ +
Sbjct: 35 TGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGK 94
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
+ LLK Y IC WSG GPK+ GD QAPEGFY I + +NP S Y+LS N G+PN FDKA
Sbjct: 95 FALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKA 154
Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193
RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S Q Q QA+PFRMT NM
Sbjct: 155 LGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESF-FGGQRAFQFQAYPFRMTPVNM 213
Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
++NNPN FW M+K G+D FE QEP + K+YVF +
Sbjct: 214 ARHRNNPNMPFWRMIKEGYDAFEVTRQEPKVDFCEKKYVFNAQKP 258
>gi|86747657|ref|YP_484153.1| hypothetical protein RPB_0531 [Rhodopseudomonas palustris HaA2]
gi|86570685|gb|ABD05242.1| Protein of unknown function DUF949 [Rhodopseudomonas palustris
HaA2]
Length = 485
Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats.
Identities = 104/224 (46%), Positives = 139/224 (62%), Gaps = 4/224 (1%)
Query: 18 GCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
GC+ + + KA P+ L+ +MQ K P ++R+FK E LE+WK++ Y
Sbjct: 24 GCNSDQMSLARNAKANQPVPPKLVAAMQDKNMDLQSPILVRLFKQEAELEVWKQDRSGVY 83
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N G+PN FDK+
Sbjct: 84 ALLKTYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSL 143
Query: 135 NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194
RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S Q Q+QA+PF+MT N
Sbjct: 144 GRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESF-FGGQRAFQLQAYPFKMTPVNFA 202
Query: 195 LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
++NNPN FW MLK G+D+FE QEP + ++YVF
Sbjct: 203 KHRNNPNMPFWRMLKQGYDHFEVTRQEPKVDFCEQKYVFDAAPP 246
>gi|148560248|ref|YP_001259845.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|148371505|gb|ABQ61484.1| putative lipoprotein [Brucella ovis ATCC 25840]
Length = 403
Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQIAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|158424938|ref|YP_001526230.1| hypothetical protein AZC_3314 [Azorhizobium caulinodans ORS 571]
gi|158331827|dbj|BAF89312.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 425
Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats.
Identities = 110/211 (52%), Positives = 142/211 (67%), Gaps = 1/211 (0%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
+ KA PLS +I M +K +P +P +IR+FK E LE+WK D Y LLK Y IC
Sbjct: 35 VSAKANQPLSPKMISLMSEKDMAPQNPILIRVFKEEAELEVWKAKNDGSYALLKTYPICR 94
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPK++ GD QAPEGFY I +NPNS Y+LSIN GFPN FDK+ RTG LMIH
Sbjct: 95 WSGELGPKVKIGDRQAPEGFYMITPGLMNPNSSYYLSINTGFPNAFDKSWGRTGEFLMIH 154
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G+C+SAGCYAM ++Q+ EI+A+ R++ Q QIQA PFRMT +N+ ++NNPN +F
Sbjct: 155 GDCSSAGCYAMTDEQIAEIFALAREAF-AGGQRAFQIQAMPFRMTPQNLARHRNNPNMAF 213
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
W LK G+D+FE EP + + N+QYVF
Sbjct: 214 WRNLKQGYDHFEVTKHEPKVNVCNRQYVFDA 244
>gi|254718078|ref|ZP_05179889.1| hypothetical protein Bru83_00779 [Brucella sp. 83/13]
gi|265983029|ref|ZP_06095764.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839702|ref|ZP_07472504.1| lipoprotein [Brucella sp. NF 2653]
gi|264661621|gb|EEZ31882.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405162|gb|EFM61439.1| lipoprotein [Brucella sp. NF 2653]
Length = 403
Score = 347 bits (892), Expect = 5e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|227823257|ref|YP_002827229.1| putative periplasmic protein, putative exported protein
[Sinorhizobium fredii NGR234]
gi|227342258|gb|ACP26476.1| putative periplasmic protein, putative exported protein
[Sinorhizobium fredii NGR234]
Length = 469
Score = 347 bits (892), Expect = 6e-94, Method: Composition-based stats.
Identities = 108/242 (44%), Positives = 159/242 (65%), Gaps = 8/242 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53
M R ++ A+ L GC + S+ +K E+ LS ++ M + P +
Sbjct: 1 MRFRNLVITTAIAAGLAGCTNETLDSVNLSSVKNKTEYQLSSKMVSKMSELGMQKTSPIL 60
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+RIFK E LE+WK N + + LLK YKICAWSG GPK++ GD QAPEGFY + + +N
Sbjct: 61 LRIFKEEGTLEVWKANTSSRFQLLKSYKICAWSGKLGPKVKEGDRQAPEGFYPLYPHQMN 120
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
PNS Y+L+IN GFPN +DKA+ R+G LMIHG C+S+GCY+M ++Q+ EI+A+ RD+ +G
Sbjct: 121 PNSNYYLAINTGFPNAYDKANGRSGTHLMIHGACSSSGCYSMTDEQIIEIFALARDAFKG 180
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q +Q+QAFP+RMT++NM +++NPN FW MLK+G+D FE + P + + ++YVF
Sbjct: 181 G-QESVQLQAFPYRMTAENMARHRDNPNIEFWKMLKVGYDQFEVTKRPPQVNVCERKYVF 239
Query: 234 FK 235
+
Sbjct: 240 NQ 241
>gi|23502881|ref|NP_699008.1| putative lipoprotein [Brucella suis 1330]
gi|161619949|ref|YP_001593836.1| hypothetical protein BCAN_A2079 [Brucella canis ATCC 23365]
gi|163844053|ref|YP_001628457.1| hypothetical protein BSUIS_A1874 [Brucella suis ATCC 23445]
gi|254705037|ref|ZP_05166865.1| hypothetical protein Bsuib36_14174 [Brucella suis bv. 3 str. 686]
gi|260567495|ref|ZP_05837965.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40]
gi|261755738|ref|ZP_05999447.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|306842842|ref|ZP_07475482.1| lipoprotein [Brucella sp. BO2]
gi|23348910|gb|AAN30923.1| lipoprotein, putative [Brucella suis 1330]
gi|161336760|gb|ABX63065.1| protein of unknown function DUF949 [Brucella canis ATCC 23365]
gi|163674776|gb|ABY38887.1| protein of unknown function DUF949 [Brucella suis ATCC 23445]
gi|260157013|gb|EEW92093.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40]
gi|261745491|gb|EEY33417.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|306287036|gb|EFM58547.1| lipoprotein [Brucella sp. BO2]
Length = 403
Score = 347 bits (892), Expect = 6e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|62290878|ref|YP_222671.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82700790|ref|YP_415364.1| hypothetical protein BAB1_2034 [Brucella melitensis biovar Abortus
2308]
gi|189025093|ref|YP_001935861.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19]
gi|237816386|ref|ZP_04595379.1| lipoprotein [Brucella abortus str. 2308 A]
gi|254690167|ref|ZP_05153421.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 6
str. 870]
gi|254694658|ref|ZP_05156486.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 3
str. Tulya]
gi|254696283|ref|ZP_05158111.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 2
str. 86/8/59]
gi|254731200|ref|ZP_05189778.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 4
str. 292]
gi|256258421|ref|ZP_05463957.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 9
str. C68]
gi|260546140|ref|ZP_05821880.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038]
gi|260755706|ref|ZP_05868054.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758931|ref|ZP_05871279.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760653|ref|ZP_05872996.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884733|ref|ZP_05896347.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214982|ref|ZP_05929263.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297247263|ref|ZP_06930981.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|62197010|gb|AAX75310.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82616891|emb|CAJ11990.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella melitensis
biovar Abortus 2308]
gi|189020665|gb|ACD73387.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19]
gi|237788453|gb|EEP62668.1| lipoprotein [Brucella abortus str. 2308 A]
gi|260096247|gb|EEW80123.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038]
gi|260669249|gb|EEX56189.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671085|gb|EEX57906.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675814|gb|EEX62635.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874261|gb|EEX81330.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916589|gb|EEX83450.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297174432|gb|EFH33779.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
Length = 403
Score = 347 bits (892), Expect = 6e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|86359412|ref|YP_471304.1| hypothetical protein RHE_CH03829 [Rhizobium etli CFN 42]
gi|86283514|gb|ABC92577.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 410
Score = 347 bits (892), Expect = 6e-94, Method: Composition-based stats.
Identities = 114/246 (46%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRHFAYVSLMALALAGCNDTLETAQVDLSKVKNKVEQPLPPHILNAMAAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D + RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAVNGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G QS +Q+QAFPFRMT++NM ++ +PNY FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QSTVQLQAFPFRMTAENMVKHRLDPNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQAT 245
>gi|225626415|ref|ZP_03784454.1| lipoprotein [Brucella ceti str. Cudo]
gi|225853467|ref|YP_002733700.1| hypothetical protein BMEA_A2093 [Brucella melitensis ATCC 23457]
gi|254700667|ref|ZP_05162495.1| hypothetical protein Bsuib55_07398 [Brucella suis bv. 5 str. 513]
gi|254713560|ref|ZP_05175371.1| hypothetical protein BcetM6_09439 [Brucella ceti M644/93/1]
gi|254716085|ref|ZP_05177896.1| hypothetical protein BcetM_06566 [Brucella ceti M13/05/1]
gi|256060001|ref|ZP_05450183.1| hypothetical protein Bneo5_06551 [Brucella neotomae 5K33]
gi|256112359|ref|ZP_05453280.1| hypothetical protein Bmelb3E_06696 [Brucella melitensis bv. 3 str.
Ether]
gi|256158530|ref|ZP_05456424.1| hypothetical protein BcetM4_06709 [Brucella ceti M490/95/1]
gi|256253944|ref|ZP_05459480.1| hypothetical protein BcetB_06546 [Brucella ceti B1/94]
gi|256263053|ref|ZP_05465585.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370432|ref|YP_003107943.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260169444|ref|ZP_05756255.1| hypothetical protein BruF5_14024 [Brucella sp. F5/99]
gi|261217853|ref|ZP_05932134.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221084|ref|ZP_05935365.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261321297|ref|ZP_05960494.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323975|ref|ZP_05963172.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751175|ref|ZP_05994884.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261758969|ref|ZP_06002678.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99]
gi|265993794|ref|ZP_06106351.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997044|ref|ZP_06109601.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|225618072|gb|EEH15115.1| lipoprotein [Brucella ceti str. Cudo]
gi|225641832|gb|ACO01746.1| protein of unknown function DUF949 [Brucella melitensis ATCC 23457]
gi|256000595|gb|ACU48994.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260919668|gb|EEX86321.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260922942|gb|EEX89510.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293987|gb|EEX97483.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261299955|gb|EEY03452.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261738953|gb|EEY26949.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99]
gi|261740928|gb|EEY28854.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262551512|gb|EEZ07502.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262764775|gb|EEZ10696.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263092929|gb|EEZ17104.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410029|gb|ADZ67094.1| putative lipoprotein [Brucella melitensis M28]
gi|326539745|gb|ADZ87960.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 403
Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|306843460|ref|ZP_07476061.1| lipoprotein [Brucella sp. BO1]
gi|306276151|gb|EFM57851.1| lipoprotein [Brucella sp. BO1]
Length = 403
Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats.
Identities = 111/237 (46%), Positives = 151/237 (63%), Gaps = 4/237 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFN 236
>gi|218462567|ref|ZP_03502658.1| hypothetical protein RetlK5_25260 [Rhizobium etli Kim 5]
Length = 265
Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats.
Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQAT 245
>gi|17986322|ref|NP_538956.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M]
gi|256045634|ref|ZP_05448512.1| hypothetical protein Bmelb1R_14110 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260562938|ref|ZP_05833424.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str.
16M]
gi|265992057|ref|ZP_06104614.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17981907|gb|AAL51220.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M]
gi|260152954|gb|EEW88046.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str.
16M]
gi|263003123|gb|EEZ15416.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 403
Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 150/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K P ++RIF
Sbjct: 1 MKIKTALLCSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMPRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|209551176|ref|YP_002283093.1| hypothetical protein Rleg2_3600 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536932|gb|ACI56867.1| protein of unknown function DUF949 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 409
Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats.
Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M RY + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQAT 245
>gi|190893666|ref|YP_001980208.1| hypothetical protein RHECIAT_CH0004100 [Rhizobium etli CIAT 652]
gi|190698945|gb|ACE93030.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 408
Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats.
Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQVT 245
>gi|294851264|ref|ZP_06791937.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026]
gi|294819853|gb|EFG36852.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026]
Length = 403
Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats.
Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANERTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|327188715|gb|EGE55914.1| hypothetical protein RHECNPAF_800017 [Rhizobium etli CNPAF512]
Length = 408
Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats.
Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + +K E PL +++ +M K P
Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQIDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQVT 245
>gi|154244467|ref|YP_001415425.1| hypothetical protein Xaut_0510 [Xanthobacter autotrophicus Py2]
gi|154158552|gb|ABS65768.1| protein of unknown function DUF949 [Xanthobacter autotrophicus Py2]
Length = 450
Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 143/220 (65%), Gaps = 2/220 (0%)
Query: 19 CHHSRS-LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
C+ + S +A PL+ ++ + +K SP P ++RIFK E LE+WK D + LL
Sbjct: 33 CNQTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEVWKATSDGSFALL 92
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y IC WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+GFPN FD+++ RT
Sbjct: 93 KTYPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRT 152
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G LM+HG+C+SAGCYAM ++Q+ EI+++ R+S Q Q+QA+PFRMT KN+ ++
Sbjct: 153 GEFLMVHGDCSSAGCYAMTDEQISEIFSLARESF-AGGQRAFQVQAYPFRMTPKNLARHR 211
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
NNPN +FW LK G+D+FE Q P + + + YVF
Sbjct: 212 NNPNMAFWRNLKQGYDHFEVTKQVPKVNVCGRSYVFDAEP 251
>gi|116254089|ref|YP_769927.1| hypothetical protein RL4356 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258737|emb|CAK09843.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 430
Score = 345 bits (885), Expect = 3e-93, Method: Composition-based stats.
Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L+GC+ + + +K E PL +++ M K P
Sbjct: 23 MRIRHFAYISLMALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPI 82
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 83 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANL 142
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 143 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 202
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YV
Sbjct: 203 GG-QATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 261
Query: 233 FFKGQT 238
F + T
Sbjct: 262 FNQQAT 267
>gi|260461662|ref|ZP_05809909.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259032732|gb|EEW33996.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 432
Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats.
Identities = 104/234 (44%), Positives = 148/234 (63%), Gaps = 5/234 (2%)
Query: 4 RYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R +L+ ++ I GC+ S + +A PL + ++ M+ K + RIFK E
Sbjct: 7 RTGVLVASIAI--AGCNDSSMKDFAPEANKPLPDKILADMKAKGMVRTSSVMARIFKEEG 64
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY + + +NP S Y LS
Sbjct: 65 KLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLS 124
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIGFPN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ Q+
Sbjct: 125 FNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGG-QTEFQV 183
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+AFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF +
Sbjct: 184 EAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEITKVPPKVDVCEKRYVFNQ 237
>gi|241206579|ref|YP_002977675.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860469|gb|ACS58136.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 408
Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats.
Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L+GC+ + + +K E PL +++ M K P
Sbjct: 1 MRIRHFAYISLMALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ R+G+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRSGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV
Sbjct: 181 GG-QATVQLQAFPFRMTAENMVKHRLDGNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239
Query: 233 FFKGQT 238
F + T
Sbjct: 240 FNQQAT 245
>gi|254500364|ref|ZP_05112515.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436435|gb|EEE43114.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 410
Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats.
Identities = 104/243 (42%), Positives = 149/243 (61%), Gaps = 5/243 (2%)
Query: 1 MTNRYN--ILLFALFIFLNGCH--HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56
M R + L L GC S +K + P+S ++ M P +IRI
Sbjct: 20 MYKRACTRVAAVLLAGVLVGCQADDFASGPNKHKAPVSASIKRKMADLNMPSTSPIMIRI 79
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK E+ LE+WK+ ++ LL+E++IC WSG GPK + GD QAPEGFY + +NPNS
Sbjct: 80 FKEESELEVWKQTRTGKFKLLEEFEICKWSGKLGPKFKEGDRQAPEGFYEVTPALMNPNS 139
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
Y L+ N+GFPN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G
Sbjct: 140 SYHLAFNLGFPNRYDQAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGGA- 198
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
Q+QAFPFRMT +N+ + ++ + +FW MLK G+D+FE + P I + K+YVF
Sbjct: 199 RSFQVQAFPFRMTPENLAKHYDSQHLAFWKMLKTGYDHFEVTNTPPAISVCEKKYVFDAT 258
Query: 237 QTI 239
+
Sbjct: 259 PLV 261
>gi|328541957|ref|YP_004302066.1| transcriptional regulatory protein [polymorphum gilvum SL003B-26A1]
gi|326411707|gb|ADZ68770.1| Putative transcriptional regulatory protein [Polymorphum gilvum
SL003B-26A1]
Length = 452
Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats.
Identities = 100/224 (44%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
G S K P+S + M P +IRIFK E+ LE+WK+ + Y
Sbjct: 28 CQGDEFSLGSGPKHLRPVSAEVKHKMTDLGMDVSSPIMIRIFKEESQLEVWKQAKNGRYA 87
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LL+ ++IC WSG GPKI+ GD QAPEGFY I +NPNS Y L+ N+G+PN FD++H
Sbjct: 88 LLQTFEICKWSGELGPKIKEGDRQAPEGFYEITPALMNPNSSYHLAFNLGYPNAFDRSHG 147
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G Q Q+QAFPFRMT +NM
Sbjct: 148 RTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKGG-QRSFQVQAFPFRMTPENMAR 206
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
+++N + FW MLK G+D+FE P + + ++YV+ +
Sbjct: 207 HRHNQHIDFWRMLKAGYDHFEVTKLPPKVDVCERKYVYDATSIV 250
>gi|217976362|ref|YP_002360509.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
gi|217501738|gb|ACK49147.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
Length = 449
Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 3/223 (1%)
Query: 18 GCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
GC + S+ +A P+ + M++K T+P P +IR +K E+ LE+WK D +Y
Sbjct: 26 GCEDAGLNSISARANAPVPAETVALMKEKGTTPDAPVLIRTYKKESELEVWKMKADGKYA 85
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LLK Y +C WSG GPK GD Q PEGFY I + PNS Y+L+ N+G+PN +D+A
Sbjct: 86 LLKTYPVCRWSGQLGPKTREGDRQVPEGFYSITPAQMKPNSAYYLAFNVGYPNAYDRALG 145
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
R G +M+HG C+SAGC++M + Q+ EIYA+VRD Q IQ+Q++PFRMT++NM
Sbjct: 146 RDGGAIMVHGICSSAGCFSMTDPQIGEIYALVRDGF-SGGQREIQMQSYPFRMTAENMAK 204
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Y+ +PN FW LK G D FE Q+ + + +K+YVF
Sbjct: 205 YRADPNIGFWKQLKEGSDNFEVTKQQVAVGVCSKRYVFNAEPA 247
>gi|254707445|ref|ZP_05169273.1| hypothetical protein BpinM_10862 [Brucella pinnipedialis
M163/99/10]
gi|254709013|ref|ZP_05170824.1| hypothetical protein BpinB_01867 [Brucella pinnipedialis B2/94]
gi|256030538|ref|ZP_05444152.1| hypothetical protein BpinM2_07792 [Brucella pinnipedialis
M292/94/1]
gi|261314933|ref|ZP_05954130.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316511|ref|ZP_05955708.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|265987585|ref|ZP_06100142.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|261295734|gb|EEX99230.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303959|gb|EEY07456.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|264659782|gb|EEZ30043.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 403
Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats.
Identities = 110/241 (45%), Positives = 150/241 (62%), Gaps = 4/241 (1%)
Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF
Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGF + +NP+S
Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFCTVRPAQMNPHSN 120
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q
Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKGG-QR 179
Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF
Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239
Query: 238 T 238
Sbjct: 240 P 240
>gi|222087383|ref|YP_002545920.1| hypothetical protein Arad_4240 [Agrobacterium radiobacter K84]
gi|221724831|gb|ACM27987.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 434
Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats.
Identities = 107/243 (44%), Positives = 156/243 (64%), Gaps = 9/243 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M R+ + + + L GC+ + + +K E PL + ++ M KK P
Sbjct: 1 MRIRHLAYMSLMALALAGCNDALDTASIDLSKVKNKVEQPLPDRILADMTKKGMDRNSPI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E +EI K N + + ++ Y ICAWSG GPK++ GD QAPEGFY + NL
Sbjct: 61 MIRIFKEEGTMEILKANQNNRFEVIASYSICAWSGRLGPKVKEGDRQAPEGFYNLTPANL 120
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ R+G +LMIHG C+S+GCY+M ++Q+ EIYA RD+ +
Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRSGNNLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q IQ++AFPFRMT++NM ++ + N FW MLK+G+D FE + P +++ K+YV
Sbjct: 181 GG-QKTIQLEAFPFRMTAENMVKHRLSSNIEFWKMLKVGYDNFEVTKRPPEVEVCEKKYV 239
Query: 233 FFK 235
F +
Sbjct: 240 FNQ 242
>gi|332716420|ref|YP_004443886.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3]
gi|325063105|gb|ADY66795.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3]
Length = 475
Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats.
Identities = 107/243 (44%), Positives = 155/243 (63%), Gaps = 9/243 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52
M + LL + L+GC+ + + +K ++PLS +++ + KK P
Sbjct: 44 MRLTHFALLACTALILSGCNDTLETVERDVSHVKNKVDYPLSPSILAEIDKKNMDRTSPI 103
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+IRIFK E LEIWK D + + EY+ICAWSG GPK++ GD QAPEGFY + +L
Sbjct: 104 MIRIFKEEGALEIWKAKRDNRFDKIAEYQICAWSGKLGPKVKEGDRQAPEGFYNLTPAHL 163
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
NPNSKY+L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY RD+ +
Sbjct: 164 NPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARDAFK 223
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232
G Q +Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P + + K+YV
Sbjct: 224 GG-QKTVQLQAFPFRMTAENMARHRQSEHLDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 282
Query: 233 FFK 235
F +
Sbjct: 283 FNQ 285
>gi|90420211|ref|ZP_01228119.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335545|gb|EAS49295.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 378
Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
++ C + L AE PL L+ +++ P ++R++K E+ LE+WK+ D Y
Sbjct: 64 VSACQYEDLL--PAEAPLPAALVQAIKSNGMGVKSPILVRLYKEESDLEVWKQKTDGTYA 121
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LLK Y+ICAWSG GPK + GD QAPEGFY + LNPNS Y L++N+G+PN +D+A+
Sbjct: 122 LLKTYEICAWSGKLGPKKQEGDRQAPEGFYTVTPAQLNPNSNYHLALNMGYPNTYDRANG 181
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ LMIHG C S+GCYAM+++Q+QEIY++ R S G Q QIQA+PFRMT KNM
Sbjct: 182 RTGSHLMIHGSCNSSGCYAMDDEQVQEIYSLARHSFEGG-QRAFQIQAYPFRMTPKNMAR 240
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
++N+ +Y FW MLK G DYFE Q+P + + +++YVF +
Sbjct: 241 HRNSEHYDFWKMLKKGSDYFEMTRQQPNVGVCDRRYVFDQ 280
>gi|15966436|ref|NP_386789.1| lipoprotein [Sinorhizobium meliloti 1021]
gi|307300526|ref|ZP_07580306.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
gi|307318391|ref|ZP_07597826.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
gi|15075707|emb|CAC47262.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
gi|306896073|gb|EFN26824.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
gi|306904692|gb|EFN35276.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
Length = 480
Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats.
Identities = 106/213 (49%), Positives = 148/213 (69%), Gaps = 1/213 (0%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
S+ +K E+ LS ++ M++ P ++RIFK E LE+WK N + LLK YKI
Sbjct: 30 SSVKNKTEYQLSSKMVSKMRELGMQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKI 89
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142
CAWSG GPK++ GD QAPEGFY + N +NPNS Y+L+IN G+PN +DKA+ RTG LM
Sbjct: 90 CAWSGKLGPKMKEGDRQAPEGFYPLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLM 149
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202
IHG C+SAGCY+M N+Q+ EI+A+ RD+ +G Q +Q+QAFPFRMT++NM +++NPN
Sbjct: 150 IHGACSSAGCYSMTNEQIIEIFALARDAFKGG-QESVQLQAFPFRMTAENMARHRDNPNI 208
Query: 203 SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
FW MLK G+D FE + P + + ++YVF +
Sbjct: 209 EFWKMLKAGYDQFEVTKRPPAVNVCERKYVFNQ 241
>gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1]
gi|49239092|emb|CAF28395.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1]
Length = 247
Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats.
Identities = 117/241 (48%), Positives = 154/241 (63%), Gaps = 6/241 (2%)
Query: 3 NRYNIL--LFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
R+ I+ LFA I L C S+ K E PL + M P+ P ++R FK
Sbjct: 4 KRFLIIYVLFATGI-LTACEGRLPASIRAKVEQPLPREVQNRMVLYNVDPYAPIMMRFFK 62
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
ENI EIWK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP SKY
Sbjct: 63 EENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTISASQMNPYSKY 122
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS NIGFPN +D+AH RTG++LM+HG C SAGCY+M++K M +IYA RD+ RG Q
Sbjct: 123 YLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFRGG-QRK 181
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
Q+QAFPFRMT NM + ++P+Y FW MLK G+D FEKN + P + + K+YVF G+T
Sbjct: 182 FQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYEKRYVFNTGKT 241
Query: 239 I 239
+
Sbjct: 242 V 242
>gi|150397767|ref|YP_001328234.1| hypothetical protein Smed_2569 [Sinorhizobium medicae WSM419]
gi|150029282|gb|ABR61399.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419]
Length = 481
Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats.
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 8/242 (3%)
Query: 1 MTNRYNILLFALFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53
M R IL A+ L GC + S+ +K E+ LS ++ M++ P +
Sbjct: 9 MRFRNLILTVAVAAALAGCTNETLDSVNLSSVKNKTEYQLSGKMVSKMRELGMQKTSPIL 68
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+RIFK E LE+WK N + LLK YKICAWSG GPK++ GD QAPEGFY + LN
Sbjct: 69 LRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKVKEGDRQAPEGFYPLYPRQLN 128
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173
PNS Y+L+IN G+PN +DKA+ RTG LMIHG C+S+GCY+M ++Q+ EI+A+ RD+ +G
Sbjct: 129 PNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSSGCYSMTDEQIIEIFALARDAFKG 188
Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q +Q+QAFPFRMT++NM +++NPN FW MLK+G+D FE + P + + ++YVF
Sbjct: 189 G-QESVQLQAFPFRMTAENMARHRDNPNIDFWKMLKVGYDQFEVTKRPPAVNVCERKYVF 247
Query: 234 FK 235
+
Sbjct: 248 NQ 249
>gi|298292760|ref|YP_003694699.1| hypothetical protein Snov_2792 [Starkeya novella DSM 506]
gi|296929271|gb|ADH90080.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 593
Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 141/222 (63%), Gaps = 1/222 (0%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
G + K LS + + +K S P V+RIFK E+ LE+WK+ +Y
Sbjct: 33 CTGDDGPSPMSAKGTKSLSPQTVALIGEKGMSRTSPIVVRIFKEESELEVWKQTTSGDYA 92
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
LLK Y IC WSG GPK++ GD QAPEGFY + +NPNS+Y+LS ++G+PN FD++
Sbjct: 93 LLKTYPICRWSGELGPKVKEGDRQAPEGFYTVTPGQMNPNSQYYLSFDLGYPNAFDRSLG 152
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTGA+LM+HG+C S GCYAM ++Q+QE++A+ R+S G Q Q+QA+PFRMT++NM
Sbjct: 153 RTGANLMVHGDCTSRGCYAMTDEQVQEVFALGRESFMGG-QRSFQVQAYPFRMTAENMVR 211
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
++NNPN +FW M+K G D FE P + K+YVF
Sbjct: 212 HRNNPNLAFWKMIKEGSDTFEVTKAPPKVDFCAKRYVFNATP 253
>gi|49474796|ref|YP_032838.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse]
gi|49240300|emb|CAF26782.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse]
Length = 247
Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats.
Identities = 115/243 (47%), Positives = 154/243 (63%), Gaps = 7/243 (2%)
Query: 1 MT-NRY--NILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIR 55
MT NR+ +LFA+ I L C S+ K E PL + + M P+ P ++R
Sbjct: 1 MTFNRFFATCVLFAIGI-LTACKERLPASIRAKVEQPLPQEVQNKMVLHNIDPYAPIMMR 59
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
FK EN+ EIWK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP
Sbjct: 60 FFKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTISADQMNPY 119
Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNM 175
SKY+LS NIGFPN +D+ H RTG++LM+HG C S GCYAM +K M +IYA RD+ RG
Sbjct: 120 SKYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFARDAFRGG- 178
Query: 176 QSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
Q Q+QAFPFRMT+ NM + +P+Y FW MLK G+D+FE+N + P + + K+YVF
Sbjct: 179 QKEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYKKRYVFST 238
Query: 236 GQT 238
+T
Sbjct: 239 NKT 241
>gi|114705348|ref|ZP_01438256.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi
HTCC2506]
gi|114540133|gb|EAU43253.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi
HTCC2506]
Length = 329
Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats.
Identities = 104/236 (44%), Positives = 145/236 (61%), Gaps = 2/236 (0%)
Query: 1 MTNRYNIL-LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
M R + F + + AE PL L+ ++ P ++R+FK
Sbjct: 1 MIVRRLLTGAFLATALFTATSCKYADLLPAEAPLPAALVAQIRANSMGVNSPMLVRLFKE 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+WK+ D Y LK Y ICAWSG GPK GD QAPEGFY + LNPNS Y
Sbjct: 61 ESELEVWKQRTDGTYAHLKTYPICAWSGKLGPKFAEGDRQAPEGFYNVNPTQLNPNSSYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+IN+G+PN +D+A+ RTG+ LMIHG C S+GCYAM++ Q+QEIY + R S G Q +
Sbjct: 121 LAINMGYPNTYDRANGRTGSHLMIHGSCNSSGCYAMDDVQVQEIYGLARHSFEGG-QRNF 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
QIQA+PFRMT +NM + N+ +Y+FW MLK G DYFE+ + P + + +++Y+F +
Sbjct: 180 QIQAYPFRMTPQNMARHSNSEHYAFWTMLKKGSDYFEQTRKPPHVGVCDRRYIFDQ 235
>gi|110346930|ref|YP_665748.1| hypothetical protein Meso_4116 [Mesorhizobium sp. BNC1]
gi|110283041|gb|ABG61101.1| protein of unknown function DUF949 [Chelativorans sp. BNC1]
Length = 335
Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats.
Identities = 103/228 (45%), Positives = 152/228 (66%), Gaps = 2/228 (0%)
Query: 9 LFALFIFLNGCHHS-RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ AL +FL+ C + + KA P+ L+ M +K SP P ++RIFK E+ LE+WK
Sbjct: 11 IAALALFLSACVSTVLDVDGKATRPIPAALVADMSRKSMSPSAPVLVRIFKQESELEVWK 70
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R+ ++ LLK Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y+LS N+G+P
Sbjct: 71 RDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEGFYHVSARMLNPNSQYYLSFNLGYP 130
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N + A TG LM+HG C+S+GC+A+ ++ + EIYA+ R++L+G Q Q+QAFPFR
Sbjct: 131 NRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEIYAVAREALKGG-QGSFQVQAFPFR 189
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
MT +NM +N+PN++FW+ LKLG+D FE ++P + +YVF +
Sbjct: 190 MTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKVSYCEGRYVFDR 237
>gi|307942526|ref|ZP_07657874.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4]
gi|307774165|gb|EFO33378.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4]
Length = 408
Score = 337 bits (866), Expect = 6e-91, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 136/213 (63%), Gaps = 1/213 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
K + P+ + M + P +IRIFK E+ LE+WK+ Y LL+ ++IC WS
Sbjct: 47 PKHKRPVDSTIKRKMTELGMRSTSPIMIRIFKQESELEVWKQARGGRYKLLETFEICKWS 106
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK + GD QAPEGFY I + +NP S Y L+ N+G+PN FD+AH RTG+ LM+HG
Sbjct: 107 GELGPKFKEGDRQAPEGFYEIMPSLMNPKSSYHLAFNLGYPNRFDRAHGRTGSHLMVHGA 166
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+S GCYAM +KQ+Q+IYA+ RDS +G Q Q+QAFPFRMT +NM + + + FW
Sbjct: 167 CSSRGCYAMTDKQVQDIYALARDSFKGG-QRSFQVQAFPFRMTPENMAKNRESEHMDFWR 225
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
MLK+G+D+FE P I + K+YVF +
Sbjct: 226 MLKVGYDHFELTKVPPKISVCEKKYVFDATPLV 258
>gi|163759951|ref|ZP_02167035.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43]
gi|162282909|gb|EDQ33196.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43]
Length = 398
Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 151/229 (65%), Gaps = 2/229 (0%)
Query: 10 FALFIFLNGCHHS-RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
L + L GC + S+ +K EHPL L+ M+ S P ++RIFK E +LE+WK+
Sbjct: 1 MLLVVGLVGCQDALDSVSNKVEHPLPSKLVNKMKANDMSTRSPIMMRIFKEEGVLEVWKQ 60
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+ Y ++ Y+IC WSG GPK + GD QAPEG+Y I +NPNS Y+LS N+GFPN
Sbjct: 61 KGNGRYDIIAAYEICKWSGVLGPKFKEGDRQAPEGYYRIYPAQMNPNSSYYLSFNMGFPN 120
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D++HNRTG++LM+HG C+SAGCY+M ++Q+ EIY RD+ +G Q + ++A PFRM
Sbjct: 121 SYDRSHNRTGSNLMVHGACSSAGCYSMTDEQVLEIYGFARDAFKGG-QEYFLVEALPFRM 179
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
T +NM ++++ ++ FW MLK G+D+FE + P +++ + YVF +
Sbjct: 180 TPENMARHRDSEHFEFWKMLKTGYDHFELTKRPPKVEVCERSYVFNQVP 228
>gi|254472222|ref|ZP_05085622.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211958505|gb|EEA93705.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 389
Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
C + +K + P+S++L M+ K P ++R+FK E+ LE+WK+ EY LL+
Sbjct: 28 CQGTEFGAEKHQQPVSKSLSNRMKSKDMELKSPIMVRLFKQESELEVWKQTKSGEYALLE 87
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
+ IC WSG GPK + GD QAPEGFY + +NP S Y+LS N+GFPN+FD+AH+RTG
Sbjct: 88 TFDICKWSGKLGPKFKEGDRQAPEGFYEVTPGLMNPFSSYYLSFNLGFPNKFDRAHDRTG 147
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
++LM+HG C+S GCYAM ++Q+ +IYA+ RDS G Q Q+QAFPFRMT +NM +
Sbjct: 148 SNLMVHGACSSRGCYAMTDEQIADIYALGRDSFLGG-QRKFQVQAFPFRMTPENMAKNAS 206
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+ +Y FW MLK G+D+FE + P I++ +K+YVF
Sbjct: 207 SEHYEFWRMLKRGYDHFEVTKRPPAIEVCDKKYVFNA 243
>gi|220924463|ref|YP_002499765.1| hypothetical protein Mnod_4595 [Methylobacterium nodulans ORS 2060]
gi|219949070|gb|ACL59462.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 524
Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats.
Identities = 98/206 (47%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ + + M K S P +IR +K E+ +E+WKR D Y LLK + IC WSG G
Sbjct: 37 QPIPQKTLALMSTKGMSAGDPILIRAYKKESEMEVWKRGSDGRYALLKTFPICRWSGQLG 96
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+ RTG LM+HG C+SA
Sbjct: 97 PKIRQGDRQAPEGFYTITPGQMNPNSSYYLSFDTGFPNAFDRANGRTGTYLMVHGTCSSA 156
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM ++ + EIYAI R++ Q Q Q++PFRMT++N+ Y+N+PN FW LK
Sbjct: 157 GCFAMTDEAIAEIYAIAREAF-AGGQRGFQFQSYPFRMTAQNVAKYRNDPNMPFWKNLKE 215
Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKG 236
G DYFE +EP + + +YVF
Sbjct: 216 GSDYFEALREEPKVGVCGTRYVFGGA 241
>gi|170742903|ref|YP_001771558.1| hypothetical protein M446_4794 [Methylobacterium sp. 4-46]
gi|168197177|gb|ACA19124.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46]
Length = 518
Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats.
Identities = 101/203 (49%), Positives = 134/203 (66%), Gaps = 1/203 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ + + M +K SP P +IR FK E+ +E+WKR D Y LLK + IC WSG G
Sbjct: 36 QPIPQKTVALMSQKGMSPGDPILIRAFKKESEMEVWKRGSDGRYALLKTFPICRWSGQLG 95
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+NRTG LM+HG C+SA
Sbjct: 96 PKIRQGDRQAPEGFYPITPGQMNPNSSYYLSFDTGFPNAFDRANNRTGTYLMVHGTCSSA 155
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM ++ + EIYAI R++ Q Q Q++PFRM ++N+ Y+N+PN FW LK
Sbjct: 156 GCFAMTDEAIAEIYAIAREAF-AGGQRAFQFQSYPFRMNAENLAKYRNDPNMPFWKNLKE 214
Query: 211 GHDYFEKNHQEPFIQIINKQYVF 233
G DYFE H+EP + + +YVF
Sbjct: 215 GSDYFEALHEEPRVGVCGTRYVF 237
>gi|254564096|ref|YP_003071191.1| hypothetical protein METDI5786 [Methylobacterium extorquens DM4]
gi|254271374|emb|CAX27387.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 462
Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 4/226 (1%)
Query: 14 IFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S +++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSQTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGA 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAF-NGGQRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFGGA 240
>gi|304394155|ref|ZP_07376078.1| lipoprotein [Ahrensia sp. R2A130]
gi|303293595|gb|EFL87972.1| lipoprotein [Ahrensia sp. R2A130]
Length = 345
Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats.
Identities = 106/232 (45%), Positives = 154/232 (66%), Gaps = 5/232 (2%)
Query: 7 ILLFALFI---FLNGCHHSRSLID-KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
+LL +L + L+GC + + +D KA P+ + L+ M+ K + P ++RIFK EN
Sbjct: 1 MLLASLAVTGLVLSGCQDNLAGLDTKASVPVPQKLVRQMKAKNMATNAPIMVRIFKQENT 60
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
LEIWK+ + Y +L +Y+IC WSG GPK + GD QAPEGFY + +NP S+Y L+
Sbjct: 61 LEIWKKTRNGRYAMLADYEICKWSGKLGPKFKEGDRQAPEGFYNVTPALMNPRSQYHLAF 120
Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
N+GFPN +D++H RTG LM+HG C+SAGCYAM ++Q++ IYA+ RD+ +G Q QIQ
Sbjct: 121 NMGFPNAYDRSHGRTGTHLMVHGACSSAGCYAMTDQQVEVIYALARDAFKGG-QKGFQIQ 179
Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
AFPFRMT +NM ++N ++++W MLK GHD+FE P + + K+Y F
Sbjct: 180 AFPFRMTEENMVANRDNQHFAYWQMLKKGHDHFEITKVPPKVDVCEKRYEFN 231
>gi|188584456|ref|YP_001927901.1| hypothetical protein Mpop_5272 [Methylobacterium populi BJ001]
gi|179347954|gb|ACB83366.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 475
Score = 334 bits (856), Expect = 8e-90, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 4/226 (1%)
Query: 14 IFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S ++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGS 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAF-NGGQRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFEALKEEPRVAACGTKYVFGGA 240
>gi|218533074|ref|YP_002423890.1| hypothetical protein Mchl_5200 [Methylobacterium chloromethanicum
CM4]
gi|218525377|gb|ACK85962.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 462
Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 4/226 (1%)
Query: 14 IFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S ++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGA 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAF-NGGQRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFGGA 240
>gi|163854129|ref|YP_001642172.1| hypothetical protein Mext_4733 [Methylobacterium extorquens PA1]
gi|163665734|gb|ABY33101.1| protein of unknown function DUF949 [Methylobacterium extorquens
PA1]
Length = 462
Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 4/226 (1%)
Query: 14 IFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S ++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGA 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAF-NGGQRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFGGA 240
>gi|240141585|ref|YP_002966065.1| hypothetical protein MexAM1_META1p5185 [Methylobacterium extorquens
AM1]
gi|240011562|gb|ACS42788.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 462
Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 4/226 (1%)
Query: 14 IFLNGCHHSR---SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
+ L C S ++ P+ + MQ K S P +IR FK E +E+WKR
Sbjct: 16 MTLGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGA 75
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN
Sbjct: 76 NGQYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAI 135
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D+A TG +M+HG C+S+GC+AM + M EIYAI R++ Q Q Q++PFRMT+
Sbjct: 136 DRAKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAF-NGGQRAFQFQSYPFRMTA 194
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 195 SNIAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFGGA 240
>gi|170748277|ref|YP_001754537.1| hypothetical protein Mrad2831_1859 [Methylobacterium radiotolerans
JCM 2831]
gi|170654799|gb|ACB23854.1| protein of unknown function DUF949 [Methylobacterium radiotolerans
JCM 2831]
Length = 504
Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 134/218 (61%), Gaps = 4/218 (1%)
Query: 19 CHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
C + ++ P++ + MQ K P P +IR FK E +EIWKR D Y
Sbjct: 24 CQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDGRYA 83
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+K Y IC WSG GPK GD QAPEGFY I +NPNS Y+LS + GFPN D+A+
Sbjct: 84 LMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANG 143
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG LM+HG C+SAGC+AM + + EIYA+ RD+ G Q Q Q++PFRMT++NM
Sbjct: 144 RTGKYLMVHGTCSSAGCFAMTDATIAEIYAVARDAFIGG-QRSFQFQSYPFRMTAENMAK 202
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
++N+PN +FW LK G DYFE H+EP + +YVF
Sbjct: 203 FRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVF 240
>gi|222149988|ref|YP_002550945.1| hypothetical protein Avi_4058 [Agrobacterium vitis S4]
gi|221736970|gb|ACM37933.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 445
Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats.
Identities = 103/214 (48%), Positives = 144/214 (67%), Gaps = 1/214 (0%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
++ +K E PL ++ S++ K P IRIFK E +LEIWK D + + +Y+
Sbjct: 32 PANVSNKVEQPLPPEILASLKAKGMERNSPIAIRIFKEEGVLEIWKAKTDGRFEKIADYQ 91
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL 141
ICAWSG GPK + GD QAPEGFY + NLNP SKY+L+IN GFPN++D +NR G +L
Sbjct: 92 ICAWSGKLGPKEKEGDRQAPEGFYALTPANLNPYSKYYLAINTGFPNKYDAVNNRNGTNL 151
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201
MIHG C+S+GCY+M + Q+ EIYA RD+ RG Q+ +Q+QAFPFRMT++NM ++ + +
Sbjct: 152 MIHGACSSSGCYSMTDAQILEIYAFARDAFRGGQQT-VQLQAFPFRMTAENMARHRYSTH 210
Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
FW MLK G+D FE Q P + + +K+YVF +
Sbjct: 211 MPFWQMLKAGYDQFEVTKQPPQVGVCDKKYVFNQ 244
>gi|300024682|ref|YP_003757293.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526503|gb|ADJ24972.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 321
Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Query: 1 MTNRYNI--LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
+T R + + A + L C ++ ++ +E PLS++ I + KK P +RIFK
Sbjct: 7 LTWRAAVQTAVMAGAVLLAACSNTPTIPPPSEVPLSKDAISLLAKKGMQSGSPIFVRIFK 66
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E+ LEIWK+ D + K Y IC WSG GPK+ GD QAPEGFY + +NPNSKY
Sbjct: 67 EESELEIWKQRDDGRFYHFKTYPICNWSGEIGPKLTYGDRQAPEGFYSVTPGLMNPNSKY 126
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+LS N+G+PN +D++ NRTG +M+HG C SAGCYAM + M+EIY + R++L+ Q+
Sbjct: 127 YLSFNLGYPNAYDRSWNRTGDSVMVHGNCRSAGCYAMTDALMEEIYGLSREALKAG-QTS 185
Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
Q+QA PFRMT M +N+ ++W LK G+DYFEK P + + ++YV
Sbjct: 186 FQVQALPFRMTDARMAREKNSKWLTYWKTLKQGYDYFEKYRVPPNVVVCERRYVV 240
>gi|218529105|ref|YP_002419921.1| hypothetical protein Mchl_1094 [Methylobacterium chloromethanicum
CM4]
gi|240141940|ref|YP_002966450.1| hypothetical protein MexAM1_META2p0201 [Methylobacterium extorquens
AM1]
gi|254559780|ref|YP_003066875.1| hypothetical protein METDI1259 [Methylobacterium extorquens DM4]
gi|218521408|gb|ACK81993.1| protein of unknown function DUF949 [Methylobacterium
chloromethanicum CM4]
gi|240011884|gb|ACS43109.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254267058|emb|CAX22871.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 357
Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats.
Identities = 92/218 (42%), Positives = 135/218 (61%), Gaps = 2/218 (0%)
Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
C R + + P+ + M K SP P ++R +K E+ +E+WKR D +Y LL
Sbjct: 18 CQDGRYAASTRHLAPIPPATLALMSTKEMSPADPILMRAYKKESEIELWKRGADGKYALL 77
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y +C WSG GPK GD QAPEGFY I ++NPNS +LS N+G+PNE+D++ RT
Sbjct: 78 KTYPMCRWSGQLGPKTREGDRQAPEGFYSITPASMNPNSSLYLSFNLGYPNEYDRSLGRT 137
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
GA LM+HG C+S GC+AM ++ + E+YA+VR++ Q +Q Q++PFRMT +N+ ++
Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEAISELYAVVREAF-AGGQHAVQFQSYPFRMTPENLARHR 196
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+PN +FW +K G D FE EP + + +YVF
Sbjct: 197 QDPNIAFWMNIKEGSDRFEITKTEPVVGVAGARYVFDA 234
>gi|182677537|ref|YP_001831683.1| hypothetical protein Bind_0542 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633420|gb|ACB94194.1| protein of unknown function DUF949 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 407
Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats.
Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 1/233 (0%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ + + F K E P+ + M+ + T+ P +IR +K E LE
Sbjct: 10 WRAVSILVAFFACQQGAVAGGYSKGETPIPGATLALMRARDTTAEAPILIRTYKKEAELE 69
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
IWK+ + +VLLK + IC WSG GPK + GD QAPEGFY++G +NPNS Y+LS ++
Sbjct: 70 IWKQARNGRFVLLKTFPICRWSGQLGPKSQQGDRQAPEGFYWVGPKQMNPNSAYYLSFDV 129
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN +DKAH +G+ +M+HG C+SAGC+AM +K + EIYAI R++LRG Q Q QA+
Sbjct: 130 GYPNAYDKAHGGSGSYVMVHGTCSSAGCFAMTDKGVGEIYAIAREALRGGQQ-AFQFQAY 188
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
PFRMT++NM Y+ + N +FW LK G D FE +EP + + + +YVF +
Sbjct: 189 PFRMTAQNMAKYRLDANIAFWRQLKEGSDRFEATGEEPLVSVASGRYVFSPSK 241
>gi|319409434|emb|CBI83083.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 249
Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 142/236 (60%), Gaps = 4/236 (1%)
Query: 3 NRYNILLFALFIF-LNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
+RY + F L + L C S+ K + PL + + M + P+ P ++R FK
Sbjct: 4 SRYFLSFFLLAVGILAACQERLPASIQAKVKQPLPKEIQHKMVEYNVDPYAPIMMRFFKE 63
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
EN E+WK++ +VL+ Y IC WSG GPK + GD Q PEGFY + + +NP S+ +
Sbjct: 64 ENTAEVWKQDRTGRFVLVASYDICKWSGQLGPKYKEGDYQTPEGFYTVNASQMNPYSRRY 123
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
LS NIGFPN +D+AH RTG+ LM+HG C S GCYAM + M +IYA RD+ +G Q
Sbjct: 124 LSFNIGFPNLYDQAHGRTGSYLMVHGGCTSVGCYAMTDNNMGQIYAFARDAFKGG-QKEF 182
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
Q+ FPFRMT NM+ +++NP+Y FW MLK G+D FE I + K+YVF +
Sbjct: 183 QLHTFPFRMTDANMERHRDNPHYPFWMMLKEGYDLFEAKRAPSKIDVYEKRYVFDR 238
>gi|240851368|ref|YP_002972771.1| putative lipoprotein [Bartonella grahamii as4aup]
gi|240268491|gb|ACS52079.1| putative lipoprotein [Bartonella grahamii as4aup]
Length = 249
Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats.
Identities = 111/239 (46%), Positives = 152/239 (63%), Gaps = 5/239 (2%)
Query: 1 MTNRYNILLFALFIF--LNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56
MT + + LF+ L C S+ K E PL + + M P+ P V+R
Sbjct: 1 MTFSRFLAVCVLFVMGILAACGGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRF 60
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK EN+ E+WK++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP S
Sbjct: 61 FKEENLAEVWKQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTISANQMNPYS 120
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
KY+LS NIGFPN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q
Sbjct: 121 KYYLSFNIGFPNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKGG-Q 179
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
Q+QAFPFRMT NM + N+P+Y FW MLK G+D+FEKN Q P +++ K+YVF +
Sbjct: 180 REFQLQAFPFRMTEDNMLRHSNDPHYQFWVMLKKGYDFFEKNRQPPTVEVYGKRYVFNR 238
>gi|163869344|ref|YP_001610600.1| hypothetical protein Btr_2657 [Bartonella tribocorum CIP 105476]
gi|161019047|emb|CAK02605.1| hypothetical protein BT_2657 [Bartonella tribocorum CIP 105476]
Length = 249
Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 151/232 (65%), Gaps = 4/232 (1%)
Query: 7 ILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+LF + I L C S+ K E PL + + M P+ P V+R FK EN+ E
Sbjct: 10 CVLFVIGI-LTACEGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRFFKEENVAE 68
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP SKY+LS NI
Sbjct: 69 VWKQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTITANQMNPYSKYYLSFNI 128
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q Q+QAF
Sbjct: 129 GYPNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKGG-QRAFQLQAF 187
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFRMT NM + N+P+Y FW MLK G+D+FE+N Q P +++ K+Y+F +G
Sbjct: 188 PFRMTEDNMLRHGNDPHYPFWVMLKKGYDFFEENRQPPIVEVYGKRYIFNRG 239
>gi|188583325|ref|YP_001926770.1| hypothetical protein Mpop_4119 [Methylobacterium populi BJ001]
gi|179346823|gb|ACB82235.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 355
Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 136/219 (62%), Gaps = 2/219 (0%)
Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
C + + + P+ + M K SP P ++R +K E+ +E+WKR D +Y LL
Sbjct: 18 CQDGQYAASTRHLAPIPPATLALMSAKGVSPADPILMRAYKKESEIELWKRGTDGKYALL 77
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y +C WSG GPK GD QAPEGFY + ++NPNS +LS N+G+PNE+D++ RT
Sbjct: 78 KTYAMCRWSGQLGPKTREGDRQAPEGFYAVTPASMNPNSSLYLSFNLGYPNEYDRSLGRT 137
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
GA LM+HG C+S GC+AM ++ + E+YA+VR++ Q +Q Q++PFRMT +N+ ++
Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEVISELYAVVREAF-AGGQRAVQFQSYPFRMTPENLARHR 196
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+PN +FW LK G D FE E + + + +YVF G
Sbjct: 197 QDPNIAFWRNLKEGSDRFEVTGAEQGVGVADGRYVFDAG 235
>gi|121602349|ref|YP_988380.1| putative lipoprotein [Bartonella bacilliformis KC583]
gi|120614526|gb|ABM45127.1| putative lipoprotein [Bartonella bacilliformis KC583]
Length = 247
Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats.
Identities = 110/237 (46%), Positives = 149/237 (62%), Gaps = 2/237 (0%)
Query: 1 MTNR-YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
M NR + + L + L C + K+E PL +N++ M K + P ++R FK
Sbjct: 2 MLNRCFLVFLLLVTGILAACQGKFARHHKSEQPLPKNILNKMAKFNIDQYAPIMMRFFKE 61
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
ENI EIWK+N + +VL+ Y IC WSG GPK GD QAPEGFY + N +NP S Y+
Sbjct: 62 ENIAEIWKQNREGRFVLITHYSICKWSGKLGPKYREGDYQAPEGFYMVRPNQMNPRSNYY 121
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
LS NIGFPN +D+ + RTG+ LM+HG CASAGCY+MN+K M +IYA RD+ RG Q
Sbjct: 122 LSFNIGFPNLYDQVNGRTGSYLMVHGGCASAGCYSMNDKNMAQIYAFARDAFRGG-QRGF 180
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ AFPF MT NM ++ +P+Y FW MLK G+D+FEK + P I++ K+Y+F
Sbjct: 181 SLHAFPFHMTDANMARHRASPHYPFWKMLKEGYDFFEKYRKLPVIEVYEKRYIFRHP 237
>gi|240139176|ref|YP_002963651.1| hypothetical protein MexAM1_META1p2599 [Methylobacterium extorquens
AM1]
gi|240009148|gb|ACS40374.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 356
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 2/219 (0%)
Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
C + + + P+ + M K S P ++R +K E+ +E+WKR D Y LL
Sbjct: 18 CQDGQYAASTRHLAPIPPATLALMSTKGVSAADPILMRAYKKESEIELWKRGADGRYALL 77
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y +C WSG GPK GD QAPEGFY + +LNPNS +LS ++G+PNE+D++ RT
Sbjct: 78 KTYPMCRWSGQLGPKTREGDRQAPEGFYAVTPASLNPNSSLYLSFDLGYPNEYDRSLGRT 137
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
GA LM+HG C+S GC+AM ++ + E+YA+VR++ Q +Q Q++PFRMT +N+ ++
Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEAISELYAVVREAF-AGGQRAVQFQSYPFRMTPENLARHR 196
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+PN +FW LK G D FE EP + +YVF G
Sbjct: 197 QDPNVAFWRNLKEGSDRFEVTWAEPVVGAAGGRYVFDAG 235
>gi|188584157|ref|YP_001927602.1| hypothetical protein Mpop_4971 [Methylobacterium populi BJ001]
gi|179347655|gb|ACB83067.1| protein of unknown function DUF949 [Methylobacterium populi BJ001]
Length = 400
Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 134/214 (62%), Gaps = 1/214 (0%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
S +L DKA P+ + M + T P V+R +K E+ +E+WKRN YV +K Y
Sbjct: 27 SAALADKASAPIPAATLALMAARGTHAASPIVLRAYKKESEIEVWKRNAAGRYVPIKTYP 86
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL 141
IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS +IG+PN +D+AH TG+ +
Sbjct: 87 ICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDIGYPNAYDRAHGSTGSAV 146
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201
M+HG C+S GC+AM + E+++I R++ QS Q Q+FPFRMT+ NM ++ +PN
Sbjct: 147 MVHGICSSMGCFAMTDAVAGELFSIAREAF-AGGQSAFQFQSFPFRMTAANMARHRTDPN 205
Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+FW LK G D FE +EP + + +Y F
Sbjct: 206 IAFWRQLKEGSDRFEATGEEPVVSVAGGRYAFAP 239
>gi|298291546|ref|YP_003693485.1| hypothetical protein Snov_1557 [Starkeya novella DSM 506]
gi|296928057|gb|ADH88866.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 339
Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 2/219 (0%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
GC S D+A+ P+ L+ M K SP P ++RI+K E+ LEIWKR+ Y LL
Sbjct: 18 GCIGSD-YDDRADVPIPPKLMQQMAAKGMSPADPIMVRIYKRESELEIWKRDRSGRYALL 76
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137
K Y +C WSG GPK GD QAPEGFY + +NP S+++L+ N+G+PN+ ++A +
Sbjct: 77 KTYPMCRWSGRLGPKTREGDRQAPEGFYAVTPGLMNPRSQFYLAFNLGYPNQLEEALGYS 136
Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197
G+ LM+HG C SAGCYAM N + E+YA+ R++L Q Q+QA PFRMT N ++
Sbjct: 137 GSALMVHGACTSAGCYAMTNDGIAEVYAVAREALAAG-QPSFQVQALPFRMTPANFAEHR 195
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
++PN +FW LK G D F Q P + +Y F G
Sbjct: 196 DDPNMAFWRNLKEGTDLFAVTRQPPNVAACGGRYRFTPG 234
>gi|163853853|ref|YP_001641896.1| hypothetical protein Mext_4457 [Methylobacterium extorquens PA1]
gi|163665458|gb|ABY32825.1| protein of unknown function DUF949 [Methylobacterium extorquens
PA1]
Length = 396
Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 138/227 (60%), Gaps = 3/227 (1%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
L L I ++ + DKA P+ + M + T+ P V+R +K E+ +E+WKR
Sbjct: 12 LVGLAILTA--SNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKR 69
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
N YV +K Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN
Sbjct: 70 NASGRYVPIKTYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPN 129
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D+AH TG+ +M+HG C+S GC+AM + E++AI R++ Q Q Q+FPFRM
Sbjct: 130 AYDRAHGSTGSAVMVHGVCSSMGCFAMTDAVAGELFAIAREAF-AGGQGAFQFQSFPFRM 188
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
T+ NM ++ +PN +FW LK G D FE +EP + ++ +Y F
Sbjct: 189 TAANMARHRTDPNIAFWRQLKEGSDRFEATGEEPAVSVVGGRYTFAP 235
>gi|218532798|ref|YP_002423614.1| hypothetical protein Mchl_4921 [Methylobacterium chloromethanicum
CM4]
gi|218525101|gb|ACK85686.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 406
Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 138/227 (60%), Gaps = 3/227 (1%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
L L I ++ + DKA P+ + M + T+ P V+R +K E+ +E+WKR
Sbjct: 22 LVGLAILTA--SNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKR 79
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
N YV +K Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN
Sbjct: 80 NASGRYVPIKTYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPN 139
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D+AH TG+ +M+HG C+S GC+AM + E++AI R++ Q Q Q+FPFRM
Sbjct: 140 AYDRAHGSTGSAVMVHGVCSSMGCFAMTDAVAGELFAIAREAF-AGGQVAFQFQSFPFRM 198
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
T+ NM ++ +PN +FW LK G D FE +EP + + + +Y F
Sbjct: 199 TAANMARHRTDPNIAFWRQLKEGSDRFEATGEEPAVSVTSGRYTFAP 245
>gi|220925727|ref|YP_002501029.1| hypothetical protein Mnod_5898 [Methylobacterium nodulans ORS 2060]
gi|219950334|gb|ACL60726.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 378
Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 136/211 (64%), Gaps = 1/211 (0%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
K PL + M + T+P P ++R +K E+ +E+WKR D +VLLK + IC WS
Sbjct: 33 PKHLLPLPATTLALMTARNTTPGAPILMRAYKKESEIEVWKRAADGRFVLLKSFPICRWS 92
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
G GPK++ GD QAPEGFY + +NPNS+Y+LS ++G+PN +D+AH TG+ LM+HG
Sbjct: 93 GQLGPKLKAGDRQAPEGFYTVRPQQMNPNSRYYLSFDVGYPNAYDRAHGGTGSALMVHGT 152
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
C+SAGC+AM ++Q+ EI+A+ R++ Q+ Q QAFPFRM ++N+ ++ +PN +FW
Sbjct: 153 CSSAGCFAMTDRQVGEIFALAREAF-AGGQAAFQFQAFPFRMNAENLARHRQDPNIAFWR 211
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
LK G D FE +EP + + +Y F
Sbjct: 212 QLKEGSDRFEATGREPLVSVAAGRYGFAPYP 242
>gi|182679828|ref|YP_001833974.1| hypothetical protein Bind_2917 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635711|gb|ACB96485.1| protein of unknown function DUF949 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 545
Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 137/226 (60%), Gaps = 5/226 (2%)
Query: 17 NGCHHSRSLI----DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72
GC S +A PLS + M + T+ P +IR +K E LEIWK D
Sbjct: 49 AGCDEVMSPPGLSNARAHAPLSHKTLTLMSEHGTTSASPVLIRTYKKEAELEIWKMGADG 108
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
Y LK Y +C WSG GPK+ GD Q PEGFY I ++PNS Y+LS ++G+PN FD+
Sbjct: 109 RYKHLKTYPMCRWSGQLGPKMREGDRQVPEGFYAITPAQMHPNSHYYLSFDVGYPNTFDR 168
Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192
A R+G +M+HG C+SAGC++M ++Q++EIYAIVR+ Q IQ+Q++PFRMT++N
Sbjct: 169 AWGRSGGSIMVHGVCSSAGCFSMTDEQIEEIYAIVREGF-AGGQRAIQMQSYPFRMTAEN 227
Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+ Y+ +PN +FW LK G D+F+ QE + + ++ Y+F
Sbjct: 228 LAKYRLDPNIAFWRQLKEGADHFDLTRQEVIVGVCDRHYIFNALPA 273
>gi|315121782|ref|YP_004062271.1| hypothetical protein CKC_00160 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495184|gb|ADR51783.1| hypothetical protein CKC_00160 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 212
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 154/211 (72%), Positives = 188/211 (89%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
++DKAE+PL ++L+ M+KK+TSP+HP++IRIFK ENILEIWK DA+Y+LLK+YKICA
Sbjct: 1 MVDKAEYPLPKSLVRYMEKKKTSPYHPSLIRIFKEENILEIWKYTYDAQYILLKQYKICA 60
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPKIETGD Q+PEGFYYIGWNNLNPNSKY+LSINIGFPNEFD+ HNRTG D+MIH
Sbjct: 61 WSGIIGPKIETGDRQSPEGFYYIGWNNLNPNSKYYLSINIGFPNEFDREHNRTGTDIMIH 120
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G C+SAGCYAMN+KQ+ EIYAI+RDSLRG MQS+IQ+QAFPFRMT +NM+ YQ +P+Y F
Sbjct: 121 GGCSSAGCYAMNDKQILEIYAIIRDSLRGKMQSYIQVQAFPFRMTQENMKRYQTHPDYFF 180
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
WN+LK+G+DYFE NH EP +Q++NKQYVF K
Sbjct: 181 WNILKIGYDYFENNHLEPIVQVLNKQYVFLK 211
>gi|240141307|ref|YP_002965787.1| hypothetical protein MexAM1_META1p4901 [Methylobacterium extorquens
AM1]
gi|240011284|gb|ACS42510.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens
AM1]
Length = 382
Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 1/217 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
++ + DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K
Sbjct: 6 ASNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKRNASGRYVPIK 65
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG
Sbjct: 66 TYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTG 125
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
+ +M+HG C+S GC+AM + E++AI R++ Q Q Q+FPFRMT+ NM ++
Sbjct: 126 SAVMVHGVCSSMGCFAMTDAVAGELFAIAREAF-AGGQGAFQFQSFPFRMTAANMARHRT 184
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+PN +FW LK G D FE +EP + + +Y F
Sbjct: 185 DPNIAFWRQLKEGSDRFEATGEEPAVSVAGGRYTFAP 221
>gi|323137197|ref|ZP_08072276.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
gi|322397555|gb|EFY00078.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
Length = 407
Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 1/214 (0%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
++ P+ + M+K T+ P +IR +K E LEIWK D YV LK + +C
Sbjct: 28 FSHRSLAPIPPETVALMEKVGTTKEAPMLIRAYKKEAELEIWKMRSDGRYVHLKTFPMCR 87
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPK GD Q PEGFY I +NPNS Y+LS N+G+PN+ D+A +G +M+H
Sbjct: 88 WSGQLGPKTREGDRQVPEGFYSITPAQMNPNSAYYLSFNVGYPNQLDRALGHSGGTIMVH 147
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G C+SAGC++M +KQ+ EIYAI R S G Q IQ+Q++PF+MT++N+ ++ +PN F
Sbjct: 148 GACSSAGCFSMTDKQIAEIYAIARSSF-GGGQRAIQMQSYPFKMTAENLAKHRLDPNIGF 206
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
W LK G+D+FE +EP + + YVF
Sbjct: 207 WKNLKEGNDHFEVTKEEPQVAFCGRHYVFNATPA 240
>gi|296445739|ref|ZP_06887692.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
gi|296256719|gb|EFH03793.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
Length = 500
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
C+ S L ++ P+ + M++ + PT+IR +K E+ +IWK+ D YV LK
Sbjct: 26 CNDS-GLSQRSLQPIPPETLALMEQAGVTKESPTLIRSYKKESEFQIWKQRPDGRYVYLK 84
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
+ +C WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+G+PN +D+A G
Sbjct: 85 TFPMCRWSGQLGPKVREGDRQAPEGFYSITPGQMNPNSSYYLSFNVGYPNAYDRALGHGG 144
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
+M+HG C+SAGC++M + Q+ EIYAI+R S N Q IQ+Q++PF+MT++N+ ++
Sbjct: 145 GSIMVHGACSSAGCFSMTDHQISEIYAILRTSF-NNGQRAIQMQSYPFKMTAENLAKHRL 203
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+P+ FW LK G D+FE +EP + + YVF T
Sbjct: 204 DPHIGFWKQLKNGSDHFETAWREPTVGVCGHHYVFDAAPT 243
>gi|217979292|ref|YP_002363439.1| protein of unknown function DUF949 [Methylocella silvestris BL2]
gi|217504668|gb|ACK52077.1| protein of unknown function DUF949 [Methylocella silvestris BL2]
Length = 415
Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
K+E P+ + M+ + T+P P ++R FK E+ +E+WKRN YV LK + IC
Sbjct: 43 ASPKSEQPIPAATLALMEARDTTPDAPILMRAFKKESEIEVWKRNRSGRYVFLKSFPICR 102
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPK+ GD Q+PEGFY +G +NPNS Y+LS + GFPN +DKAH +G+ LM+H
Sbjct: 103 WSGKLGPKVAQGDRQSPEGFYSVGPRQMNPNSAYYLSFDTGFPNAYDKAHGASGSALMVH 162
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
G C+SAGCYAM +K + EI+A+ R++LRG Q+ Q QA+PF+MT++N+ Y+ +PN F
Sbjct: 163 GTCSSAGCYAMTDKGVAEIFALAREALRGG-QNAFQFQAYPFKMTAQNLARYRADPNIGF 221
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
W LK G D FE +E + ++N +YVF
Sbjct: 222 WRQLKEGFDRFEATGEELGVGVVNGRYVFAP 252
>gi|150376335|ref|YP_001312931.1| hypothetical protein Smed_4193 [Sinorhizobium medicae WSM419]
gi|150030882|gb|ABR62998.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419]
Length = 364
Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats.
Identities = 102/228 (44%), Positives = 147/228 (64%), Gaps = 2/228 (0%)
Query: 8 LLFALFIFLNGC-HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
L + FL+GC + KA LS+ ++ M KK+ SP P ++RIFK E+ LE+W
Sbjct: 38 LALSAAAFLSGCLAMGLYDLSKAPPQLSKKVLAEMAKKKMSPNSPVLVRIFKKESELEVW 97
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K + Y L K Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y++S N+G+
Sbjct: 98 KADASGTYALFKTYPMCRWSGKLGPKKKDGDRQAPEGFYHVSARMLNPNSQYYVSFNLGY 157
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN + A TG LM+HG C+SAGCYAM ++ + EIYAIV+ +L Q H Q+QA+PF
Sbjct: 158 PNRLESALGYTGEALMVHGACSSAGCYAMTDRGVGEIYAIVQRALAAG-QKHFQVQAYPF 216
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
RMT++NM L++ +P+ +FW LK G+D F + ++P + + +YVF
Sbjct: 217 RMTTENMALHKGDPSMAFWKTLKQGYDAFAFSRRQPKVSVCGGRYVFN 264
>gi|254563816|ref|YP_003070911.1| hypothetical protein METDI5493 [Methylobacterium extorquens DM4]
gi|254271094|emb|CAX27101.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens
DM4]
Length = 381
Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 135/217 (62%), Gaps = 1/217 (0%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
++ + DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K
Sbjct: 6 ASNTLARADKANAPIPAATLALMTARGTNAASPIVLRAYKKESEIEVWKRNAAGRYVPIK 65
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG
Sbjct: 66 TYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTG 125
Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198
+ +M+HG C+S GC+AM + E++AI R++ Q Q Q+FPFRMT+ NM ++
Sbjct: 126 SAVMVHGVCSSMGCFAMTDAVAGELFAIAREAF-AGGQGAFQFQSFPFRMTAANMARHRT 184
Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+PN +FW LK G D FE +EP + + + +Y F
Sbjct: 185 DPNIAFWRQLKEGSDRFEATGEEPAVSVTSGRYTFAP 221
>gi|319899485|ref|YP_004159582.1| hypothetical protein BARCL_1352 [Bartonella clarridgeiae 73]
gi|319403453|emb|CBI77024.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 231
Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats.
Identities = 107/219 (48%), Positives = 138/219 (63%), Gaps = 3/219 (1%)
Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
C S K E PL + + M + P ++R FK ENI EIWK+N +V
Sbjct: 2 ACQERLPTSFRAKIEQPLPQEVFNKMAMYDIDQYAPIMMRFFKEENIAEIWKQNRSGVFV 61
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+ Y IC WSG GPK GD QAPEGFY I N +NP SKY+LS NIGFPN +D+ H
Sbjct: 62 LVISYNICKWSGQLGPKYREGDFQAPEGFYTIQANQMNPYSKYYLSFNIGFPNLYDRIHG 121
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ +M+HG C+S GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ
Sbjct: 122 RTGSYIMVHGACSSVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDANMQR 180
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
+ NP+Y FW MLK G+D+FE N + P I + +K+Y+F
Sbjct: 181 HHANPHYKFWKMLKEGYDFFEINRKPPRISVYDKRYIFD 219
>gi|170743408|ref|YP_001772063.1| hypothetical protein M446_5308 [Methylobacterium sp. 4-46]
gi|168197682|gb|ACA19629.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46]
Length = 415
Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80
++ L K P+ + M + T+P P ++R FK E +E+W R D + LK +
Sbjct: 34 PAKHLSAKHLAPIPGPTLALMAARGTAPGAPILMRAFKKEAEIEVWTRGADGRFAHLKTF 93
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140
IC WSG GPK +GD QAPEGFY I +NPNS+Y+LS ++G+PN +D+AH TG+
Sbjct: 94 PICRWSGQLGPKRRSGDRQAPEGFYSIRPAQMNPNSRYYLSFDVGYPNAYDRAHGGTGSA 153
Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200
LM+HG C+SAGC+AM + Q+ EI+A+ R++ Q+ Q QA+PFRM++ + ++ +P
Sbjct: 154 LMVHGTCSSAGCFAMTDAQVSEIFALAREAF-AGGQAAFQFQAYPFRMSAAALARHRLDP 212
Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
N FW LK G D FE +EP + + +Y F
Sbjct: 213 NIDFWRQLKEGADRFEATGREPLVTVAGGRYAFAPYP 249
>gi|332716121|ref|YP_004443587.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3]
gi|325062806|gb|ADY66496.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3]
Length = 351
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 144/229 (62%), Gaps = 2/229 (0%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHP-LSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+ A+ L C K + P LS ++ M K P P ++RIFK E+ LE+W
Sbjct: 26 AVVAIGSGLAACTSMGLDSVKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELEVW 85
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K + Y LLK Y +C WSG GPK +TGD QAPEGFY++ LNPNS+Y++S N+G+
Sbjct: 86 KIDKTGNYALLKTYPMCRWSGKLGPKTKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNLGY 145
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN + A TG LM+HG C+S+GCYAM ++Q+ EIYA+V +L+G Q Q+QA+PF
Sbjct: 146 PNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEIYAVVARALQGG-QDRFQVQAYPF 204
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
RM+++NM +++PN FW LK G+DYFE ++P + + ++YVF
Sbjct: 205 RMSARNMVANRDDPNMPFWKTLKEGYDYFEVTRRQPKVSVCGRRYVFNS 253
>gi|159185697|ref|NP_357274.2| hypothetical protein Atu3332 [Agrobacterium tumefaciens str. C58]
gi|159140831|gb|AAK90059.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 328
Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 146/229 (63%), Gaps = 2/229 (0%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHP-LSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+ A+ L C K + P LS ++ M K P P ++RIFK E+ LE+W
Sbjct: 3 AVVAIGGSLVACTSMGLDSVKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELEVW 62
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
K + Y LLK Y +C WSG GPK++TGD QAPEGFY++ LNPNS+Y++S N+G+
Sbjct: 63 KVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNLGY 122
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN + A TG LM+HG C+S+GCYAM ++Q+ EIYAIV +L+G Q Q+QA+PF
Sbjct: 123 PNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEIYAIVARALQGG-QDRFQVQAYPF 181
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
RM+++NM ++++PN FW LK G+DYFE ++P + + ++YVF
Sbjct: 182 RMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPKVSVCGRRYVFNS 230
>gi|90020858|ref|YP_526685.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Saccharophagus degradans
2-40]
gi|89950458|gb|ABD80473.1| protein of unknown function DUF949 [Saccharophagus degradans 2-40]
Length = 238
Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 138/235 (58%), Gaps = 1/235 (0%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+ ++LLF+ I N + + A + + LI ++ +K P IRIFK
Sbjct: 5 SLIASLLLFSCAIAANNQLPTSARSIAAINKVEPALIKALSEKGLRYGAPIFIRIFKQSA 64
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + + L K Y ICA SG GPK+ +GD QAPEGFY++ NP SK+ LS
Sbjct: 65 TLEVWLQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVNAQRFNPWSKFHLS 124
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
N+G+PN +D+AH RTG+ LM+HG+C S GCYAM + ++EIYA+ + SL Q ++
Sbjct: 125 FNLGYPNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQKSLEDG-QPFFRV 183
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
FPFR++ + ++ +NN Y+FW LK G DYFE+ P + + NK+YVF
Sbjct: 184 HIFPFRLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNKRYVFSAP 238
>gi|312114367|ref|YP_004011963.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219496|gb|ADP70864.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 453
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 135/233 (57%), Gaps = 9/233 (3%)
Query: 9 LFALFIFLNGC-------HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+ L + L GC + + + AE L + + K P IRIFK E+
Sbjct: 10 VAPLLLGLTGCLNLFGFGGDAENAVPPAERQLPASTQAMLAIKGMRTDAPIFIRIFKEES 69
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+WK D + + Y ICAWSGT GPKI+TGD Q+PEGFY + +NP S Y+L+
Sbjct: 70 ELEVWKLK-DGRFQHFRTYPICAWSGTLGPKIQTGDRQSPEGFYTVTRGQMNPRSNYYLA 128
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN D+ + TG+ LM+HG C S GCYAM + ++EIY + R++ Q+ +
Sbjct: 129 FNIGYPNVHDQVNGHTGSALMVHGNCKSVGCYAMTDAYIEEIYILAREAFDAG-QTKFHV 187
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
QA PFRMT+ NM +++NP Y+FW LK G+D FE + + P +++ KQY
Sbjct: 188 QALPFRMTAANMAKHRDNPWYAFWARLKEGYDSFEASGKPPIVKVCGKQYQVN 240
>gi|123443424|ref|YP_001007397.1| hypothetical protein YE3221 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090385|emb|CAL13253.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 249
Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats.
Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 10/231 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
++FA+ I L + S SE + +S + K+ I+IFK E LE++
Sbjct: 3 IMFAMIICLPAVSFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERTLELYA 54
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 55 R-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINIGFP 113
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFR
Sbjct: 114 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFR 172
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT +NMQ ++N+ +YSFW L+ G+ YF KN P + +IN QYV + T
Sbjct: 173 MTEQNMQRHRNSSDYSFWRQLQPGYAYFAKNRMPPSVSVINGQYVLSRPPT 223
>gi|318604536|emb|CBY26034.1| putative exported protein STY0357 [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 257
Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 138/234 (58%), Gaps = 10/234 (4%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ ++FA+ I L + S + A +S + K+ I+IFK E LE
Sbjct: 8 FVTIMFAMIICLPAVSFTSSASEPA--------AVSKELKQQLLGSSVYIQIFKEERTLE 59
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INI
Sbjct: 60 LYAR-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINI 118
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +
Sbjct: 119 GFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIY 177
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PFRMT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T
Sbjct: 178 PFRMTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231
>gi|170767696|ref|ZP_02902149.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170123184|gb|EDS92115.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 246
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IAFILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPIVSVVNGRYVVSKPLS 228
>gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099]
gi|14023835|dbj|BAB50440.1| mlr3577 [Mesorhizobium loti MAFF303099]
Length = 395
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
+ RIFK E LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY
Sbjct: 1 MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFY 60
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYA 165
+ + +NP S Y LS NIGFPN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA
Sbjct: 61 TVRPSQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYA 120
Query: 166 IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225
RD+ +G Q+ Q++AFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P +
Sbjct: 121 FGRDAFQGG-QTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVD 179
Query: 226 IINKQYVFFK 235
+ K+YVF +
Sbjct: 180 VCEKRYVFNQ 189
>gi|194432691|ref|ZP_03064976.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|194418953|gb|EDX35037.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|332094988|gb|EGJ00027.1| hypothetical protein SB521682_0312 [Shigella boydii 5216-82]
gi|332097308|gb|EGJ02289.1| hypothetical protein SD15574_0703 [Shigella dysenteriae 155-74]
Length = 246
Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L QS +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QSSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|218547671|ref|YP_002381462.1| hypothetical protein EFER_0250 [Escherichia fergusonii ATCC 35469]
gi|218355212|emb|CAQ87819.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 246
Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|332160663|ref|YP_004297240.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664893|gb|ADZ41537.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862520|emb|CBX72677.1| uncharacterized protein yafK [Yersinia enterocolitica W22703]
Length = 251
Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats.
Identities = 92/234 (39%), Positives = 138/234 (58%), Gaps = 10/234 (4%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ ++FA+ I L + S + A +S + K+ I+IFK E LE
Sbjct: 8 FVTIMFAMIICLPAVSFTSSASEPA--------AVSKELKQQLLGSSVYIQIFKEERTLE 59
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INI
Sbjct: 60 LYAR-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINI 118
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +
Sbjct: 119 GFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIY 177
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PFRMT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T
Sbjct: 178 PFRMTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231
>gi|300024883|ref|YP_003757494.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526704|gb|ADJ25173.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 326
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 89/235 (37%), Positives = 133/235 (56%), Gaps = 1/235 (0%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ + L L H +R+ A PL ++ K P P IR+FK E+ LE
Sbjct: 6 WLAAVLFLLGTLPALHAARAEEQAAAKPLPATTEAALLMKEIVPEAPVYIRVFKEESELE 65
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+WK + Y L+K + IC W GT GPK GD +PEGFY + P+SKY L+ NI
Sbjct: 66 VWKARPNGRYALVKTFPICNWGGTLGPKQTQGDRMSPEGFYAATPGGMKPDSKYHLAFNI 125
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN D+A RTGA +M+HG+C S GC+AM++K ++EIYA VRD+L + + + F
Sbjct: 126 GYPNALDRALGRTGAYIMVHGDCRSVGCFAMSDKLIEEIYAFVRDALAAG-EPSVPVHVF 184
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
PFRMT+ N++ + +NP + W LK +D F + + P + + +K+YV +
Sbjct: 185 PFRMTASNIKRHADNPARTTWAPLKQAYDDFAETREPPKVGMCSKRYVVNSLTPV 239
>gi|323963534|gb|EGB59092.1| ykud domain-containing protein [Escherichia coli H489]
Length = 246
Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ D +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 KMGD-QYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|218662493|ref|ZP_03518423.1| hypothetical protein RetlI_25155 [Rhizobium etli IE4771]
Length = 214
Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats.
Identities = 104/198 (52%), Positives = 140/198 (70%), Gaps = 1/198 (0%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100
M K P +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QA
Sbjct: 1 MSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQA 60
Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
PEGFY + NLNPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+
Sbjct: 61 PEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQV 120
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQ 220
EIYA RD+ +G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE +
Sbjct: 121 LEIYAFARDAFKGG-QATVQLQAFPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKR 179
Query: 221 EPFIQIINKQYVFFKGQT 238
P + + K+YVF + T
Sbjct: 180 PPEVNVCEKKYVFNQQAT 197
>gi|283784004|ref|YP_003363869.1| lipoprotein [Citrobacter rodentium ICC168]
gi|282947458|emb|CBG87005.1| putative lipoprotein [Citrobacter rodentium ICC168]
Length = 246
Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ + S IS + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCVSFAGLLGSS----SPTTPISKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + +++ +YV K +
Sbjct: 178 MTDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGRYVVSKPLS 228
>gi|110804363|ref|YP_687883.1| hypothetical protein SFV_0304 [Shigella flexneri 5 str. 8401]
gi|110613911|gb|ABF02578.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 246
Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + + N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKPLS 228
>gi|26246272|ref|NP_752311.1| hypothetical protein c0374 [Escherichia coli CFT073]
gi|227884755|ref|ZP_04002560.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972]
gi|300977425|ref|ZP_07173891.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301045870|ref|ZP_07193057.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|331656306|ref|ZP_08357268.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206]
gi|331681646|ref|ZP_08382279.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299]
gi|26106670|gb|AAN78855.1|AE016756_38 Hypothetical protein yafK precursor [Escherichia coli CFT073]
gi|227838356|gb|EEJ48822.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972]
gi|300302120|gb|EFJ58505.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409835|gb|EFJ93373.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552159|gb|ADN44934.1| probable membrane protein [Escherichia coli ABU 83972]
gi|315295167|gb|EFU54502.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|315300869|gb|EFU60091.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|331054554|gb|EGI26563.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206]
gi|331080848|gb|EGI52013.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299]
Length = 246
Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|15799929|ref|NP_285941.1| hypothetical protein Z0282 [Escherichia coli O157:H7 EDL933]
gi|15829505|ref|NP_308278.1| hypothetical protein ECs0251 [Escherichia coli O157:H7 str. Sakai]
gi|16128210|ref|NP_414759.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|74310866|ref|YP_309285.1| hypothetical protein SSON_0266 [Shigella sonnei Ss046]
gi|82542817|ref|YP_406764.1| hypothetical protein SBO_0215 [Shigella boydii Sb227]
gi|82775615|ref|YP_401962.1| hypothetical protein SDY_0250 [Shigella dysenteriae Sd197]
gi|89107099|ref|AP_000879.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|91209312|ref|YP_539298.1| hypothetical protein UTI89_C0264 [Escherichia coli UTI89]
gi|110640461|ref|YP_668189.1| hypothetical protein ECP_0254 [Escherichia coli 536]
gi|117622528|ref|YP_851441.1| hypothetical protein APECO1_1743 [Escherichia coli APEC O1]
gi|157156909|ref|YP_001461413.1| hypothetical protein EcE24377A_0256 [Escherichia coli E24377A]
gi|157159707|ref|YP_001457025.1| hypothetical protein EcHS_A0252 [Escherichia coli HS]
gi|168750207|ref|ZP_02775229.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168757252|ref|ZP_02782259.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168763465|ref|ZP_02788472.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168770022|ref|ZP_02795029.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168776136|ref|ZP_02801143.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168782984|ref|ZP_02807991.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168789696|ref|ZP_02814703.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|168800338|ref|ZP_02825345.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|170021388|ref|YP_001726342.1| hypothetical protein EcolC_3396 [Escherichia coli ATCC 8739]
gi|170079853|ref|YP_001729173.1| hypothetical protein ECDH10B_0206 [Escherichia coli str. K-12
substr. DH10B]
gi|170680694|ref|YP_001742344.1| hypothetical protein EcSMS35_0235 [Escherichia coli SMS-3-5]
gi|187731026|ref|YP_001879020.1| hypothetical protein SbBS512_E0219 [Shigella boydii CDC 3083-94]
gi|188494558|ref|ZP_03001828.1| conserved hypothetical protein [Escherichia coli 53638]
gi|191165732|ref|ZP_03027571.1| conserved hypothetical protein [Escherichia coli B7A]
gi|191171355|ref|ZP_03032904.1| conserved hypothetical protein [Escherichia coli F11]
gi|193063243|ref|ZP_03044334.1| conserved hypothetical protein [Escherichia coli E22]
gi|193068636|ref|ZP_03049597.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194427590|ref|ZP_03060138.1| conserved hypothetical protein [Escherichia coli B171]
gi|194438191|ref|ZP_03070283.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|195938627|ref|ZP_03084009.1| hypothetical protein EscherichcoliO157_19732 [Escherichia coli
O157:H7 str. EC4024]
gi|208808317|ref|ZP_03250654.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208813045|ref|ZP_03254374.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208818968|ref|ZP_03259288.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209400375|ref|YP_002268852.1| hypothetical protein ECH74115_0267 [Escherichia coli O157:H7 str.
EC4115]
gi|209917436|ref|YP_002291520.1| hypothetical protein ECSE_0245 [Escherichia coli SE11]
gi|215485377|ref|YP_002327808.1| hypothetical protein E2348C_0221 [Escherichia coli O127:H6 str.
E2348/69]
gi|217324922|ref|ZP_03441006.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218552829|ref|YP_002385742.1| hypothetical protein ECIAI1_0264 [Escherichia coli IAI1]
gi|218557182|ref|YP_002390095.1| hypothetical protein ECS88_0261 [Escherichia coli S88]
gi|218688119|ref|YP_002396331.1| hypothetical protein ECED1_0258 [Escherichia coli ED1a]
gi|218693708|ref|YP_002401375.1| hypothetical protein EC55989_0248 [Escherichia coli 55989]
gi|218698832|ref|YP_002406461.1| hypothetical protein ECIAI39_0428 [Escherichia coli IAI39]
gi|218703497|ref|YP_002411016.1| hypothetical protein ECUMN_0245 [Escherichia coli UMN026]
gi|237707757|ref|ZP_04538238.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238899616|ref|YP_002925412.1| hypothetical protein BWG_0210 [Escherichia coli BW2952]
gi|253774752|ref|YP_003037583.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160340|ref|YP_003043448.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606]
gi|254791383|ref|YP_003076220.1| secreted protein [Escherichia coli O157:H7 str. TW14359]
gi|256020199|ref|ZP_05434064.1| secreted protein [Shigella sp. D9]
gi|256024132|ref|ZP_05437997.1| secreted protein [Escherichia sp. 4_1_40B]
gi|260842470|ref|YP_003220248.1| hypothetical protein ECO103_0240 [Escherichia coli O103:H2 str.
12009]
gi|260853439|ref|YP_003227330.1| hypothetical protein ECO26_0240 [Escherichia coli O26:H11 str.
11368]
gi|260866384|ref|YP_003232786.1| hypothetical protein ECO111_0246 [Escherichia coli O111:H- str.
11128]
gi|261223721|ref|ZP_05938002.1| secreted protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261255870|ref|ZP_05948403.1| hypothetical protein EscherichiacoliO157EcO_08563 [Escherichia coli
O157:H7 str. FRIK966]
gi|291281068|ref|YP_003497886.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str.
CB9615]
gi|293403327|ref|ZP_06647418.1| yafK protein [Escherichia coli FVEC1412]
gi|293408342|ref|ZP_06652181.1| conserved hypothetical protein [Escherichia coli B354]
gi|293413502|ref|ZP_06656151.1| yafK protein [Escherichia coli B185]
gi|293418341|ref|ZP_06660776.1| yafK protein [Escherichia coli B088]
gi|297516867|ref|ZP_06935253.1| hypothetical protein EcolOP_04451 [Escherichia coli OP50]
gi|298378939|ref|ZP_06988820.1| yafK protein [Escherichia coli FVEC1302]
gi|300817300|ref|ZP_07097518.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300823437|ref|ZP_07103567.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300896713|ref|ZP_07115223.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300902530|ref|ZP_07120508.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1]
gi|300919505|ref|ZP_07136003.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300921963|ref|ZP_07138109.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1]
gi|300929530|ref|ZP_07144996.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300936093|ref|ZP_07151034.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300947280|ref|ZP_07161483.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955698|ref|ZP_07168048.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1]
gi|300991167|ref|ZP_07179510.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1]
gi|301019115|ref|ZP_07183319.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|301302026|ref|ZP_07208159.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1]
gi|301325431|ref|ZP_07218917.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301646781|ref|ZP_07246635.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|306813332|ref|ZP_07447525.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101]
gi|307136829|ref|ZP_07496185.1| hypothetical protein EcolH7_01679 [Escherichia coli H736]
gi|307315226|ref|ZP_07594805.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
gi|309787090|ref|ZP_07681702.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|309797867|ref|ZP_07692249.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312964717|ref|ZP_07778968.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312970348|ref|ZP_07784529.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331640684|ref|ZP_08341831.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736]
gi|331645390|ref|ZP_08346494.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605]
gi|331651155|ref|ZP_08352180.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718]
gi|331661622|ref|ZP_08362545.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143]
gi|331666518|ref|ZP_08367392.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271]
gi|331671775|ref|ZP_08372571.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280]
gi|331675908|ref|ZP_08376625.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591]
gi|332281361|ref|ZP_08393774.1| conserved hypothetical protein [Shigella sp. D9]
gi|76365082|sp|P0AA99|YAFK_ECOLI RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor
gi|90101608|sp|P0AAA0|YAFK_ECO57 RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor
gi|12512995|gb|AAG54549.1|AE005201_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|984580|dbj|BAA07586.1| YafK [Escherichia coli W3110]
gi|1552794|gb|AAB08646.1| hypothetical [Escherichia coli]
gi|1786418|gb|AAC73328.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|4902960|dbj|BAA77894.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13359708|dbj|BAB33674.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|59889755|emb|CAH19110.1| Hypothetical exported protein [Escherichia coli]
gi|73854343|gb|AAZ87050.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81239763|gb|ABB60473.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81244228|gb|ABB64936.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|91070886|gb|ABE05767.1| probable membrane protein [Escherichia coli UTI89]
gi|110342053|gb|ABG68290.1| putative periplasmic protein [Escherichia coli 536]
gi|115511652|gb|ABI99726.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157065387|gb|ABV04642.1| conserved hypothetical protein [Escherichia coli HS]
gi|157078939|gb|ABV18647.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|169756316|gb|ACA79015.1| protein of unknown function DUF949 [Escherichia coli ATCC 8739]
gi|169887688|gb|ACB01395.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170518412|gb|ACB16590.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
gi|187428018|gb|ACD07292.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|187768412|gb|EDU32256.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188015594|gb|EDU53716.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|188489757|gb|EDU64860.1| conserved hypothetical protein [Escherichia coli 53638]
gi|188999628|gb|EDU68614.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189355746|gb|EDU74165.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189361102|gb|EDU79521.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366356|gb|EDU84772.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189370756|gb|EDU89172.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|189377308|gb|EDU95724.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|190904239|gb|EDV63949.1| conserved hypothetical protein [Escherichia coli B7A]
gi|190908289|gb|EDV67879.1| conserved hypothetical protein [Escherichia coli F11]
gi|192931151|gb|EDV83754.1| conserved hypothetical protein [Escherichia coli E22]
gi|192957999|gb|EDV88441.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194414360|gb|EDX30634.1| conserved hypothetical protein [Escherichia coli B171]
gi|194422855|gb|EDX38850.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|208728118|gb|EDZ77719.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208734322|gb|EDZ83009.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208739091|gb|EDZ86773.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209161775|gb|ACI39208.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|209745414|gb|ACI71014.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745416|gb|ACI71015.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745418|gb|ACI71016.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745420|gb|ACI71017.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209745422|gb|ACI71018.1| hypothetical protein ECs0251 [Escherichia coli]
gi|209910695|dbj|BAG75769.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215263449|emb|CAS07769.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217321143|gb|EEC29567.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|218350440|emb|CAU96127.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218359597|emb|CAQ97138.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218363951|emb|CAR01616.1| conserved hypothetical protein [Escherichia coli S88]
gi|218368818|emb|CAR16566.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218425683|emb|CAR06473.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|218430594|emb|CAR11460.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|222032074|emb|CAP74813.1| Uncharacterized protein yafK [Escherichia coli LF82]
gi|226898967|gb|EEH85226.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238860270|gb|ACR62268.1| conserved protein [Escherichia coli BW2952]
gi|242376055|emb|CAQ30740.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253325796|gb|ACT30398.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972241|gb|ACT37912.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606]
gi|253976450|gb|ACT42120.1| hypothetical protein ECD_00219 [Escherichia coli BL21(DE3)]
gi|254590783|gb|ACT70144.1| secreted protein [Escherichia coli O157:H7 str. TW14359]
gi|257752088|dbj|BAI23590.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257757617|dbj|BAI29114.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257762740|dbj|BAI34235.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|260450580|gb|ACX41002.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
gi|281177441|dbj|BAI53771.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284920018|emb|CBG33074.1| putative exported protein [Escherichia coli 042]
gi|290760941|gb|ADD54902.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str.
CB9615]
gi|291324869|gb|EFE64284.1| yafK protein [Escherichia coli B088]
gi|291429180|gb|EFF02200.1| yafK protein [Escherichia coli FVEC1412]
gi|291433560|gb|EFF06533.1| yafK protein [Escherichia coli B185]
gi|291471520|gb|EFF14003.1| conserved hypothetical protein [Escherichia coli B354]
gi|294492959|gb|ADE91715.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|298280052|gb|EFI21556.1| yafK protein [Escherichia coli FVEC1302]
gi|300305605|gb|EFJ60125.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1]
gi|300317449|gb|EFJ67233.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1]
gi|300359433|gb|EFJ75303.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300399374|gb|EFJ82912.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300405401|gb|EFJ88939.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1]
gi|300413399|gb|EFJ96709.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300421633|gb|EFK04944.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1]
gi|300453081|gb|EFK16701.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300458742|gb|EFK22235.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300462529|gb|EFK26022.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300524055|gb|EFK45124.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300530276|gb|EFK51338.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300842578|gb|EFK70338.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1]
gi|300847729|gb|EFK75489.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301075016|gb|EFK89822.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|305854095|gb|EFM54534.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101]
gi|306905407|gb|EFN35944.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
gi|307628272|gb|ADN72576.1| hypothetical protein UM146_16085 [Escherichia coli UM146]
gi|308118551|gb|EFO55813.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308924668|gb|EFP70163.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|310336997|gb|EFQ02135.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312290738|gb|EFR18616.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312944850|gb|ADR25677.1| hypothetical protein NRG857_01235 [Escherichia coli O83:H1 str. NRG
857C]
gi|315059459|gb|ADT73786.1| conserved protein [Escherichia coli W]
gi|315134909|dbj|BAJ42068.1| hypothetical protein ECDH1ME8569_0212 [Escherichia coli DH1]
gi|315253705|gb|EFU33673.1| putative lipoprotein [Escherichia coli MS 85-1]
gi|315287788|gb|EFU47190.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315616857|gb|EFU97474.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320174233|gb|EFW49395.1| hypothetical protein SDB_03258 [Shigella dysenteriae CDC 74-1112]
gi|320186546|gb|EFW61273.1| hypothetical protein SGF_01254 [Shigella flexneri CDC 796-83]
gi|320190225|gb|EFW64875.1| hypothetical protein ECoD_01636 [Escherichia coli O157:H7 str.
EC1212]
gi|320197292|gb|EFW71908.1| hypothetical protein EcoM_00488 [Escherichia coli WV_060327]
gi|320201157|gb|EFW75740.1| hypothetical protein ECoL_01583 [Escherichia coli EC4100B]
gi|320638272|gb|EFX08000.1| hypothetical protein ECO5101_15460 [Escherichia coli O157:H7 str.
G5101]
gi|320643553|gb|EFX12720.1| hypothetical protein ECO9389_09877 [Escherichia coli O157:H- str.
493-89]
gi|320648968|gb|EFX17566.1| hypothetical protein ECO2687_16241 [Escherichia coli O157:H- str. H
2687]
gi|320654668|gb|EFX22669.1| hypothetical protein ECO7815_10427 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660236|gb|EFX27746.1| hypothetical protein ECO5905_08953 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665485|gb|EFX32547.1| hypothetical protein ECOSU61_12655 [Escherichia coli O157:H7 str.
LSU-61]
gi|323158023|gb|EFZ44124.1| hypothetical protein ECEPECA14_0131 [Escherichia coli EPECa14]
gi|323160311|gb|EFZ46264.1| hypothetical protein ECE128010_3457 [Escherichia coli E128010]
gi|323169550|gb|EFZ55222.1| hypothetical protein SS53G_0154 [Shigella sonnei 53G]
gi|323171030|gb|EFZ56679.1| hypothetical protein ECLT68_4353 [Escherichia coli LT-68]
gi|323178524|gb|EFZ64102.1| hypothetical protein ECOK1180_3037 [Escherichia coli 1180]
gi|323181517|gb|EFZ66937.1| hypothetical protein ECOK1357_5081 [Escherichia coli 1357]
gi|323191507|gb|EFZ76768.1| hypothetical protein ECRN5871_0177 [Escherichia coli RN587/1]
gi|323379983|gb|ADX52251.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
gi|323938769|gb|EGB35015.1| ykud domain-containing protein [Escherichia coli E1520]
gi|323943343|gb|EGB39496.1| ykud domain-containing protein [Escherichia coli E482]
gi|323945376|gb|EGB41430.1| ykud domain-containing protein [Escherichia coli H120]
gi|323952649|gb|EGB48518.1| ykud domain-containing protein [Escherichia coli H252]
gi|323958685|gb|EGB54386.1| ykud domain-containing protein [Escherichia coli H263]
gi|323965208|gb|EGB60666.1| ykud domain-containing protein [Escherichia coli M863]
gi|323972404|gb|EGB67611.1| ykud domain-containing protein [Escherichia coli TA007]
gi|323975957|gb|EGB71051.1| ykud domain-containing protein [Escherichia coli TW10509]
gi|324010196|gb|EGB79415.1| hypothetical protein HMPREF9532_00019 [Escherichia coli MS 57-2]
gi|324015561|gb|EGB84780.1| hypothetical protein HMPREF9533_00340 [Escherichia coli MS 60-1]
gi|324019964|gb|EGB89183.1| hypothetical protein HMPREF9542_01343 [Escherichia coli MS 117-3]
gi|324115590|gb|EGC09529.1| ykud domain-containing protein [Escherichia coli E1167]
gi|326338772|gb|EGD62591.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
1044]
gi|326342441|gb|EGD66221.1| hypothetical protein ECF_02950 [Escherichia coli O157:H7 str. 1125]
gi|327254523|gb|EGE66139.1| hypothetical protein ECSTEC7V_0277 [Escherichia coli STEC_7v]
gi|330910067|gb|EGH38577.1| putative exported protein [Escherichia coli AA86]
gi|331040058|gb|EGI12266.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736]
gi|331045552|gb|EGI17678.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605]
gi|331050896|gb|EGI22948.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718]
gi|331060044|gb|EGI32008.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143]
gi|331065742|gb|EGI37626.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271]
gi|331070764|gb|EGI42123.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280]
gi|331076468|gb|EGI47745.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591]
gi|332093730|gb|EGI98785.1| hypothetical protein SB359474_2408 [Shigella boydii 3594-74]
gi|332103713|gb|EGJ07059.1| conserved hypothetical protein [Shigella sp. D9]
gi|332341577|gb|AEE54911.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 246
Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|309700456|emb|CBI99749.1| putative exported protein [Escherichia coli ETEC H10407]
Length = 246
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDTNMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|301019012|ref|ZP_07183228.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299882417|gb|EFI90628.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 246
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQHNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|24111717|ref|NP_706227.1| hypothetical protein SF0274 [Shigella flexneri 2a str. 301]
gi|30061843|ref|NP_836014.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T]
gi|24050497|gb|AAN41934.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040087|gb|AAP15820.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T]
gi|281599636|gb|ADA72620.1| hypothetical protein SFxv_0291 [Shigella flexneri 2002017]
gi|332761624|gb|EGJ91904.1| hypothetical protein SF434370_0458 [Shigella flexneri 4343-70]
gi|332761650|gb|EGJ91929.1| hypothetical protein SF274771_0338 [Shigella flexneri 2747-71]
gi|332764441|gb|EGJ94674.1| hypothetical protein SFK671_0303 [Shigella flexneri K-671]
gi|332768573|gb|EGJ98755.1| hypothetical protein SF293071_0385 [Shigella flexneri 2930-71]
gi|333008739|gb|EGK28203.1| hypothetical protein SFK218_0538 [Shigella flexneri K-218]
gi|333009705|gb|EGK29155.1| hypothetical protein SFVA6_0548 [Shigella flexneri VA-6]
gi|333010776|gb|EGK30202.1| hypothetical protein SFK272_0599 [Shigella flexneri K-272]
gi|333021274|gb|EGK40527.1| hypothetical protein SFK227_0257 [Shigella flexneri K-227]
gi|333022083|gb|EGK41326.1| hypothetical protein SFK304_0403 [Shigella flexneri K-304]
Length = 246
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW LK G+DYFE+ + P + + N +YV K +
Sbjct: 178 MTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKPLS 228
>gi|320178956|gb|EFW53918.1| hypothetical protein SGB_03903 [Shigella boydii ATCC 9905]
Length = 246
Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 135/231 (58%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C L+ + S +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L QS +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QSSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LKLG+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKLGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|224582153|ref|YP_002635951.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224466680|gb|ACN44510.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 245
Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 132/231 (57%), Gaps = 7/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ S +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLMPCVSFAGLLSS-----SPVTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 59 K-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 118 NAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALVFG-QPSVQVSIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K +
Sbjct: 177 MTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKPLS 227
>gi|283834482|ref|ZP_06354223.1| putative lipoprotein [Citrobacter youngae ATCC 29220]
gi|291070029|gb|EFE08138.1| putative lipoprotein [Citrobacter youngae ATCC 29220]
Length = 246
Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ S +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLLPCVSFAGLLSSN----SPTAPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRGQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGACVSVGCYAMTDNGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ H+ P + ++N +YV K +
Sbjct: 178 MTDANMQRHKFSYYKDFWAQLKPGYDYFEQTHKPPTVSVVNGRYVISKPLS 228
>gi|51595236|ref|YP_069427.1| hypothetical protein YPTB0886 [Yersinia pseudotuberculosis IP
32953]
gi|153950202|ref|YP_001402128.1| hypothetical protein YpsIP31758_3169 [Yersinia pseudotuberculosis
IP 31758]
gi|186894254|ref|YP_001871366.1| hypothetical protein YPTS_0928 [Yersinia pseudotuberculosis PB1/+]
gi|51588518|emb|CAH20126.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
gi|152961697|gb|ABS49158.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|186697280|gb|ACC87909.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis
PB1/+]
Length = 246
Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + S SE + +S + K+ I+IFK E +LE++
Sbjct: 6 LLFAMIICLPAASFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225
>gi|145600128|ref|YP_001164204.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F]
gi|145211824|gb|ABP41231.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F]
Length = 246
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + S SE + +S + K+ I+IFK E +LE++
Sbjct: 6 LLFAMIICLPAASFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225
>gi|170025523|ref|YP_001722028.1| hypothetical protein YPK_3306 [Yersinia pseudotuberculosis YPIII]
gi|169752057|gb|ACA69575.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis
YPIII]
Length = 246
Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats.
Identities = 91/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + S SE + +S + K+ I+IFK E +LE++
Sbjct: 6 LLFAMIICLPAASFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
MT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTKQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225
>gi|319407839|emb|CBI81492.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 231
Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats.
Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 3/218 (1%)
Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
C S K E L ++ M + P ++R FK +NI EIWK+N +V
Sbjct: 2 ACQERLPTSFKAKIEQSLPREILNKMAMYDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFV 61
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H
Sbjct: 62 LVVSYGICKWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ LM+HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ
Sbjct: 122 RTGSYLMVHGACASVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDANMQR 180
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+ NP+Y FW MLK G+D+FEKN + P I + +K+YVF
Sbjct: 181 HYTNPHYEFWMMLKEGYDFFEKNRKPPKITVYDKRYVF 218
>gi|319404880|emb|CBI78481.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 231
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 137/218 (62%), Gaps = 3/218 (1%)
Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
C S K E L ++ M + P ++R FK +NI EIWK+N +V
Sbjct: 2 ACQERLPTSFKAKIEQSLPREILNKMAMNDIDQYAPIMMRFFKKDNIAEIWKQNRSGVFV 61
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H
Sbjct: 62 LVVSYDICKWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ LM+HG C+S GCY+MN++ M +IYA RD+ +G Q Q+ AFPFRMT NMQ
Sbjct: 122 RTGSYLMVHGACSSVGCYSMNDRNMAQIYAFARDAFKGG-QKEFQLHAFPFRMTDANMQR 180
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+ +P+Y FW MLK G+D+FE N + P I + +K+YVF
Sbjct: 181 HYTSPHYEFWMMLKEGYDFFETNRKPPKITVYDKRYVF 218
>gi|296101420|ref|YP_003611566.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055879|gb|ADF60617.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 246
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ S +S + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCVSFAGLLSSN----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLFV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ +PFR
Sbjct: 119 NAFDRAHGYEGKYLMIHGACVSIGCYAMTDSGIDEIFQFVTGALVFG-QPNVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM ++ + FW LK G+DYFE+ H+ P + +++ +YV K +
Sbjct: 178 MTDANMARHKYSYYADFWKQLKPGYDYFEQTHKPPVVSVVDGRYVVSKPLS 228
>gi|319406363|emb|CBI80004.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 231
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 137/219 (62%), Gaps = 3/219 (1%)
Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
C S K L ++ M + P ++R FK +NI EIWK+N +V
Sbjct: 2 ACQERLPTSFKAKIAQSLPREILDKMAIHDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFV 61
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H
Sbjct: 62 LVVSYDICKWSGQLGPKYREGDLQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
RTG+ LM+HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ
Sbjct: 122 RTGSYLMVHGACASVGCYSMNDRNMAQIYAFARDAFRGG-QKEFQLHAFPFRMTDVNMQR 180
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
+ +P+Y FW MLK G+D+FE+N + P I + NK+YVF
Sbjct: 181 HHMSPHYEFWMMLKEGYDFFERNRKPPKITVYNKRYVFD 219
>gi|206580035|ref|YP_002240293.1| hypothetical protein KPK_4495 [Klebsiella pneumoniae 342]
gi|288936999|ref|YP_003441058.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
gi|290509937|ref|ZP_06549307.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55]
gi|206569093|gb|ACI10869.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288891708|gb|ADC60026.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
gi|289776653|gb|EFD84651.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55]
Length = 246
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I LF + L + L S +S + K+ P I IFK E +L+
Sbjct: 2 RKIALFIAMLLLPCVSFAGLLSSN-----SPTTPVSKEYKQQLMGSPVYIEIFKEERMLD 56
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +INI
Sbjct: 57 LYVK-MGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYSVTRSQLKPDSRFYKAINI 115
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN +D+AH G LMIHG+C S GCYAM + + EI+ V +L Q +Q+ +
Sbjct: 116 GFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFG-QPSVQVSIY 174
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PFRMT+ NM+ ++ + FW LK G+DYF++ H+ P + + + +YV K +
Sbjct: 175 PFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPIVSVTDGRYVVSKPLS 228
>gi|45440541|ref|NP_992080.1| hypothetical protein YP_0691 [Yersinia pestis biovar Microtus str.
91001]
gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
Length = 250
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + S SE + +S + K+ I+IFK E +LE++
Sbjct: 10 LLFAMIICLPAASFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERVLELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 62 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 121 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
MT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 180 MTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 229
>gi|108808723|ref|YP_652639.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua]
gi|149364916|ref|ZP_01886951.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162420212|ref|YP_001607663.1| hypothetical protein YpAngola_A3319 [Yersinia pestis Angola]
gi|165926620|ref|ZP_02222452.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936078|ref|ZP_02224648.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010974|ref|ZP_02231872.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212890|ref|ZP_02238925.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398650|ref|ZP_02304174.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421605|ref|ZP_02313358.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167467189|ref|ZP_02331893.1| hypothetical protein YpesF_04645 [Yersinia pestis FV-1]
gi|218930268|ref|YP_002348143.1| hypothetical protein YPO3241 [Yersinia pestis CO92]
gi|229838849|ref|ZP_04459008.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229895999|ref|ZP_04511169.1| secreted protein [Yersinia pestis Pestoides A]
gi|229899418|ref|ZP_04514561.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195]
gi|294504957|ref|YP_003569019.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003]
gi|108780636|gb|ABG14694.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua]
gi|115348879|emb|CAL21835.1| putative exported protein [Yersinia pestis CO92]
gi|149291329|gb|EDM41403.1| putative exported protein [Yersinia pestis CA88-4125]
gi|162353027|gb|ABX86975.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165916223|gb|EDR34830.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921548|gb|EDR38745.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989974|gb|EDR42275.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205677|gb|EDR50157.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960524|gb|EDR56545.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051154|gb|EDR62562.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|229687820|gb|EEO79893.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195]
gi|229695215|gb|EEO85262.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700922|gb|EEO88951.1| secreted protein [Yersinia pestis Pestoides A]
gi|262363021|gb|ACY59742.1| hypothetical protein YPD4_2835 [Yersinia pestis D106004]
gi|262366945|gb|ACY63502.1| hypothetical protein YPD8_2829 [Yersinia pestis D182038]
gi|294355416|gb|ADE65757.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003]
Length = 246
Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + S SE + +S + K+ I+IFK E +LE++
Sbjct: 6 LLFAMIICLPAASFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERVLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIGFP
Sbjct: 58 K-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +PFR
Sbjct: 117 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAFIFG-QEKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
MT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV
Sbjct: 176 MTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225
>gi|152968812|ref|YP_001333921.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893215|ref|YP_002917949.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae NTUH-K2044]
gi|262044042|ref|ZP_06017122.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330005719|ref|ZP_08305359.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3]
gi|150953661|gb|ABR75691.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545531|dbj|BAH61882.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259038614|gb|EEW39805.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536141|gb|EGF62528.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3]
Length = 246
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I LF + L + L S +S + K+ P I IFK E +L+
Sbjct: 2 RKIALFIAMLLLPCVSFAGLLSSN-----SPTTPVSKEYKQQLMGSPVYIEIFKEERMLD 56
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +INI
Sbjct: 57 LYVK-MGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYNVTRSQLKPDSRFYKAINI 115
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN +D+AH G LMIHG+C S GCYAM + + EI+ V +L Q +Q+ +
Sbjct: 116 GFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALVFG-QPSVQVSIY 174
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
PFRMT+ NM+ ++ + FW LK G+DYF++ H+ P + + + +YV K +
Sbjct: 175 PFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPVVSVTDGRYVVSKPLS 228
>gi|313646642|gb|EFS11101.1| hypothetical protein SF2457T_4830 [Shigella flexneri 2a str. 2457T]
Length = 237
Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 6/225 (2%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
+ L C L+ + S +S + K+ P I+IFK E L+++ + + +
Sbjct: 1 MLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQ 55
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+A
Sbjct: 56 YQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRA 115
Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193
H G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFRMT NM
Sbjct: 116 HGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFRMTDANM 174
Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+ ++ + FW LK G+DYFE+ + P + + N +YV K +
Sbjct: 175 KRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKPLS 219
>gi|294635173|ref|ZP_06713681.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
gi|291091435|gb|EFE23996.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685]
Length = 240
Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats.
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M+ +L L + L C S S +L+ P I+IFK E
Sbjct: 1 MSKIVTLLAICLALPLAACKSSASESGSVPRSGVNSLL----------GSPVYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
LE++ + + Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+
Sbjct: 51 RQLELYAKVQNG-YQLVKRFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIG+PN +D+AH +G LMIHG+C S GCYAM N + EIY V+ + R N Q +
Sbjct: 110 AINIGYPNPYDQAHGYSGKYLMIHGDCVSVGCYAMTNAGISEIYRYVQSAFR-NGQMLVD 168
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
I +PF MT +NMQ ++N+ +FW L+ G+ YF ++ P + + + +YV
Sbjct: 169 INIYPFHMTERNMQRHRNSSYINFWRELQPGYQYFAQHALPPQVNVQDGRYVVNAPLP 226
>gi|311280788|ref|YP_003943019.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
gi|308749983|gb|ADO49735.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
Length = 246
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ S +S + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCVSFAGLLSSN----SPTTPVSKEFKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ +INIGFP
Sbjct: 60 K-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVTREQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L QS++Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGACVSIGCYAMTDSGIDEIFQFVTGALVFG-QSNVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++ + FW+ LK G+DYF + H+ P + +++ +YV K +
Sbjct: 178 MTDANMERHKFSFYKDFWSQLKPGYDYFAQTHKPPMVSVVDGRYVVSKPLS 228
>gi|324111217|gb|EGC05200.1| ykud domain-containing protein [Escherichia fergusonii B253]
gi|325496147|gb|EGC94006.1| hypothetical protein ECD227_0244 [Escherichia fergusonii ECD227]
Length = 246
Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats.
Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L C SL+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IALILAMLLIPCVSFASLLGSSSS----TTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|261340937|ref|ZP_05968795.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC
35316]
gi|288316795|gb|EFC55733.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC
35316]
Length = 246
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ S IS + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCVSFAGLLSSN----SSTTPISKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + Y LL YKIC +SG GPK GD ++PEGFY + + L P+S+++ +INIGFP
Sbjct: 60 K-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRSQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ +PFR
Sbjct: 119 NAFDRAHGYEGKYLMIHGACVSVGCYAMTDTGIDEIFQFVTGALVFG-QPNVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM ++ + FW LK G+DYFE+ H+ P + +++ +Y+ K +
Sbjct: 178 MTDANMARHKYSYYADFWKQLKPGYDYFEQTHKPPVVSVVDGRYLVSKPLS 228
>gi|156935266|ref|YP_001439182.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894]
gi|156533520|gb|ABU78346.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894]
Length = 245
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 9/232 (3%)
Query: 8 LLFALFIFLNGCHH-SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+ + + L C + ++ + P+ + K+ P I+IFK E LE++
Sbjct: 4 IALLIAMLLVSCFSWASTVSSDSVTPI------KKELKQQLMGSPVYIQIFKEERTLELY 57
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ + +Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +INIGF
Sbjct: 58 VK-MGEQYQLLDSYRICNYSGGLGPKRRQGDFKSPEGFYSVQRSQLKPDSRFYKAINIGF 116
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD+A+ G LMIHG C S GCYAM +K + EI+ V +L Q ++Q+ +PF
Sbjct: 117 PNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGALVFG-QPNVQVSIYPF 175
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
RMT NM+ ++ + FW LK G+DYF Q P + ++N YV K +
Sbjct: 176 RMTDANMERHKYSYYIGFWKQLKPGYDYFMATRQPPVVSVVNGSYVVSKPLS 227
>gi|157147183|ref|YP_001454502.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895]
gi|157084388|gb|ABV14066.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895]
Length = 246
Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLIPCVSFAGLLSSSSP----TTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L QS +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALVFG-QSSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + +++ +YV K +
Sbjct: 178 MTDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGRYVVSKPLS 228
>gi|260596636|ref|YP_003209207.1| hypothetical protein CTU_08440 [Cronobacter turicensis z3032]
gi|260215813|emb|CBA28269.1| Uncharacterized protein yafK [Cronobacter turicensis z3032]
Length = 256
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 8 LLFALFIFLNGCHH-SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+ + + L C + ++ + P+ + K+ P I+IFK E LE++
Sbjct: 15 IALLIAMLLVSCFSWASTVSSDSVTPI------KKELKQQLMGSPVYIQIFKEERKLELY 68
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ + +Y LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +INIGF
Sbjct: 69 VK-MGEQYQLLDSYNICNYSGGLGPKRRQGDFKSPEGFYSVQRSQLKPDSRFYKAINIGF 127
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD+A+ G LMIHG C S GCYAM +K + EI+ V +L Q ++Q+ +PF
Sbjct: 128 PNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGALVFG-QPNVQVSIYPF 186
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
RMT NM+ ++ + FW LK G+DYF Q P + ++N YV K +
Sbjct: 187 RMTDANMERHKYSYYIGFWKQLKPGYDYFMTTRQPPVVSVVNGSYVVSKPLS 238
>gi|237730216|ref|ZP_04560697.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905755|gb|EEH91673.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 246
Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLLPCVSFAGLLSSSSP----TTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRGQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L QS +Q+ +PFR
Sbjct: 119 NAYDRAHGYEGKYLMIHGACVSVGCYAMTDNGIDEIFQFVTGALVFG-QSSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K +
Sbjct: 178 MTDANMQRHKFSYYKDFWAQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLS 228
>gi|269138138|ref|YP_003294838.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202]
gi|267983798|gb|ACY83627.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202]
Length = 240
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M +L L + L C S S A +L+ I+IFK E
Sbjct: 1 MGKIVAMLAICLALPLAACKSSASESGTAPRSGVNSLL----------GSQVYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
LE++ + D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+
Sbjct: 51 RQLELYAKVQD-KYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIG+PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ +
Sbjct: 110 AINIGYPNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFRRG-QTLVN 168
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
I +PFRMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV
Sbjct: 169 INIYPFRMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYVVNGPLP 226
>gi|295096900|emb|CBK85990.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 246
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ S +S + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCMSFAGLLGSN----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLFV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ +PFR
Sbjct: 119 NAFDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALVFG-QPNVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM ++ + FW LK G+DYFE+ H+ P + I+N +YV K +
Sbjct: 178 MTDANMARHKYSVYTDFWKQLKPGYDYFEQTHKPPVVSIVNGRYVVSKPLS 228
>gi|146310424|ref|YP_001175498.1| hypothetical protein Ent638_0761 [Enterobacter sp. 638]
gi|145317300|gb|ABP59447.1| protein of unknown function DUF949 [Enterobacter sp. 638]
Length = 246
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ + + L C L+ S IS + K+ P I+IFK E L+++
Sbjct: 4 IALFIAMLLIPCLSFAGLLSSN----SSTTPISKEYKQQLMGSPVYIQIFKEERTLDLFV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + Y LL YKIC++SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGETYQLLDSYKICSYSGGLGPKQRQGDFKSPEGFYTVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q+ +Q+ +PFR
Sbjct: 119 NAYDRAHGYDGKYLMIHGACVSIGCYAMTDGGIDEIFQFVTGALVFG-QAGVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ H+ P + + + +Y+ K +
Sbjct: 178 MTDANMQRHKFSTYSEFWKQLKPGYDYFEQTHKPPTVSVADGRYIVSKPLS 228
>gi|16759307|ref|NP_454924.1| hypothetical protein STY0357 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16763695|ref|NP_459310.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414560|ref|YP_151635.1| hypothetical protein SPA2443 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615518|ref|YP_001589483.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553102|ref|ZP_02346852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993330|ref|ZP_02574425.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168232267|ref|ZP_02657325.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238582|ref|ZP_02663640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240051|ref|ZP_02664983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261273|ref|ZP_02683246.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465386|ref|ZP_02699268.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168819097|ref|ZP_02831097.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194445276|ref|YP_002039554.1| hypothetical protein SNSL254_A0351 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451114|ref|YP_002044296.1| hypothetical protein SeHA_C0353 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469639|ref|ZP_03075623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194738370|ref|YP_002113338.1| hypothetical protein SeSA_A0361 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251197|ref|YP_002145294.1| hypothetical protein SeAg_B0346 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264992|ref|ZP_03165066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363490|ref|YP_002143127.1| hypothetical protein SSPA2281 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198244473|ref|YP_002214267.1| hypothetical protein SeD_A0342 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389854|ref|ZP_03216465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204926845|ref|ZP_03218047.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351636|ref|YP_002225437.1| hypothetical protein SG0323 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855797|ref|YP_002242448.1| hypothetical protein SEN0295 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213162132|ref|ZP_03347842.1| hypothetical protein Salmoneentericaenterica_19903 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213425139|ref|ZP_03357889.1| hypothetical protein SentesTyphi_05232 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580522|ref|ZP_03362348.1| hypothetical protein SentesTyph_04605 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213649645|ref|ZP_03379698.1| hypothetical protein SentesTy_21510 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852431|ref|ZP_03381963.1| hypothetical protein SentesT_05809 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|238913298|ref|ZP_04657135.1| hypothetical protein SentesTe_19534 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|25359104|pir||AF0542 probable exported protein STY0357 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16418814|gb|AAL19269.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16501598|emb|CAD08782.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138552|gb|AAO70122.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128817|gb|AAV78323.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364882|gb|ABX68650.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403939|gb|ACF64161.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409418|gb|ACF69637.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456003|gb|EDX44842.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713872|gb|ACF93093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631687|gb|EDX50207.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094967|emb|CAR60504.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197214900|gb|ACH52297.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243247|gb|EDY25867.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288566|gb|EDY27943.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938989|gb|ACH76322.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602299|gb|EDZ00845.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323510|gb|EDZ08705.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271417|emb|CAR36225.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322377|gb|EDZ10216.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328600|gb|EDZ15364.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333436|gb|EDZ20200.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205339945|gb|EDZ26709.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344088|gb|EDZ30852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349892|gb|EDZ36523.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707600|emb|CAR31882.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261245538|emb|CBG23332.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992006|gb|ACY86891.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301156928|emb|CBW16409.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911281|dbj|BAJ35255.1| hypothetical protein STMDT12_C03120 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084567|emb|CBY94359.1| Uncharacterized protein yafK Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224973|gb|EFX50034.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614605|gb|EFY11534.1| hypothetical protein SEEM315_18260 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620124|gb|EFY16996.1| hypothetical protein SEEM971_15976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623418|gb|EFY20257.1| hypothetical protein SEEM973_06381 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629284|gb|EFY26063.1| hypothetical protein SEEM974_10053 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632004|gb|EFY28758.1| hypothetical protein SEEM201_09219 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637258|gb|EFY33960.1| hypothetical protein SEEM202_19419 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642455|gb|EFY39057.1| hypothetical protein SEEM954_06651 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646291|gb|EFY42805.1| hypothetical protein SEEM054_13439 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652440|gb|EFY48794.1| hypothetical protein SEEM675_07516 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653398|gb|EFY49731.1| hypothetical protein SEEM965_19094 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660454|gb|EFY56690.1| hypothetical protein SEEM19N_20333 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664606|gb|EFY60799.1| hypothetical protein SEEM801_06827 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669341|gb|EFY65491.1| hypothetical protein SEEM507_01020 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670887|gb|EFY67020.1| hypothetical protein SEEM877_06777 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678874|gb|EFY74929.1| hypothetical protein SEEM867_12580 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681903|gb|EFY77928.1| hypothetical protein SEEM180_16648 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322688029|gb|EFY83995.1| hypothetical protein SEEM600_10966 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323128630|gb|ADX16060.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194384|gb|EFZ79579.1| hypothetical protein SEEM581_21779 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197799|gb|EFZ82931.1| hypothetical protein SEEM501_21865 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203405|gb|EFZ88430.1| hypothetical protein SEEM460_07235 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206850|gb|EFZ91803.1| hypothetical protein SEEM020_02859 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210381|gb|EFZ95273.1| hypothetical protein SEEM6152_05557 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214623|gb|EFZ99374.1| hypothetical protein SEEM0077_18315 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223179|gb|EGA07522.1| hypothetical protein SEEM0047_02263 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224850|gb|EGA09113.1| hypothetical protein SEEM0055_09708 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230054|gb|EGA14174.1| hypothetical protein SEEM0052_01612 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233792|gb|EGA17881.1| hypothetical protein SEEM3312_07268 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238514|gb|EGA22572.1| hypothetical protein SEEM5258_09642 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244202|gb|EGA28211.1| hypothetical protein SEEM1156_09570 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246362|gb|EGA30345.1| hypothetical protein SEEM9199_11783 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251988|gb|EGA35851.1| hypothetical protein SEEM8282_14497 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257985|gb|EGA41664.1| hypothetical protein SEEM8283_03816 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259918|gb|EGA43549.1| hypothetical protein SEEM8284_22115 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265068|gb|EGA48567.1| hypothetical protein SEEM8285_20274 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272631|gb|EGA56038.1| hypothetical protein SEEM8287_15049 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326622011|gb|EGE28356.1| Putative L,D-transpeptidase YafK [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326626667|gb|EGE33010.1| Putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987261|gb|AEF06244.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 246
Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALVFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K +
Sbjct: 178 MTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKPLS 228
>gi|238755088|ref|ZP_04616435.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473]
gi|238706648|gb|EEP99018.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473]
Length = 240
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 136/229 (59%), Gaps = 10/229 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LL AL I L + S SE + ++ + K+ I+IFK E LE++
Sbjct: 6 LLLALIICLPAVSVTSSA--------SEPVTMAKELKQQLLGSSVYIQIFKEERTLELYA 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R + EY LL+ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP
Sbjct: 58 R-LQGEYRLLQSYRICNFSGGLGPKRREGDFKSPEGFYSIDMQHLKPDSKFYRAINIGFP 116
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N+FDK+ +G LMIHG+C S GCYAM + M EI+ V+ + N QS + I +PFR
Sbjct: 117 NDFDKSQGYSGKYLMIHGDCQSIGCYAMTDAYMDEIFNYVKMAFI-NGQSKVDISIYPFR 175
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +NMQ ++N+ +FW L+ G+ YF KN P + +IN QYV +
Sbjct: 176 MTEQNMQRHRNSTYINFWRQLQPGYTYFAKNRMPPPVGVINGQYVINRP 224
>gi|213622012|ref|ZP_03374795.1| hypothetical protein SentesTyp_32601 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 242
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 6/229 (2%)
Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69
F L + L C L+ + +S + K+ P I+IFK E L+++ +
Sbjct: 2 FFLAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK- 56
Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129
+ +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFPN
Sbjct: 57 MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFPNA 116
Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189
+D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFRMT
Sbjct: 117 YDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALVFG-QPSVQVSIYPFRMT 175
Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K +
Sbjct: 176 DANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKPLS 224
>gi|293392677|ref|ZP_06636996.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582]
gi|291424794|gb|EFE98004.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582]
Length = 258
Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats.
Identities = 96/232 (41%), Positives = 134/232 (57%), Gaps = 17/232 (7%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ K+ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PETPVV---------KQQLLGSPVYIQIFKEERKLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ + IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNTFPICNYSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++D++ +GA LMIHGEC S GCYAM N M EIY V + QS + I +
Sbjct: 113 GFPNDYDRSQGYSGAYLMIHGECKSIGCYAMTNDYMDEIYRYVEAAFAYG-QSRVNISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFRMT +N+Q ++++ SFW LK G+DYF KNHQ P + + N QYV K
Sbjct: 172 PFRMTEQNLQRHRSSTYASFWRQLKPGYDYFVKNHQPPMMGVANGQYVLGKP 223
>gi|159185833|ref|NP_356981.2| hypothetical protein Atu3631 [Agrobacterium tumefaciens str. C58]
gi|159140967|gb|AAK89766.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 379
Score = 307 bits (788), Expect = 6e-82, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P +IRIFK E LEIWK D + + Y+ICAWSG GPK++ GD QAPEGFY
Sbjct: 1 MDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFY 60
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYA 165
+ +LNPNSKY+L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY
Sbjct: 61 NLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYG 120
Query: 166 IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225
RD+ +G Q +Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P +
Sbjct: 121 FARDAFKGG-QKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVN 179
Query: 226 IINKQYVFFK 235
+ K+YVF +
Sbjct: 180 VCEKKYVFNQ 189
>gi|304558183|gb|ADM40847.1| hypothetical protein ETAF_0725 [Edwardsiella tarda FL6-60]
Length = 234
Score = 307 bits (788), Expect = 7e-82, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 12/232 (5%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+L L + L C S S A +L+ I+IFK E LE++
Sbjct: 1 MLAICLALPLAACKSSASESGTAPRSGVNSLL----------GSQVYIQIFKEERQLELY 50
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ +INIG+
Sbjct: 51 AKVQD-KYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQAINIGY 109
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + I +PF
Sbjct: 110 PNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFRRG-QTLVNINIYPF 168
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
RMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV
Sbjct: 169 RMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYVVNGPLP 220
>gi|254500008|ref|ZP_05112161.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222441475|gb|EEE48152.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 345
Score = 307 bits (788), Expect = 7e-82, Method: Composition-based stats.
Identities = 94/237 (39%), Positives = 139/237 (58%), Gaps = 2/237 (0%)
Query: 2 TNRYNILLFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
++ + + L GC S + + E + + M+ K P IRIFK E
Sbjct: 13 RRVLSVSMTIFTLLLAGCVGSSLEMESRGEIAIPYKVTALMRNKGVKGSDPVFIRIFKQE 72
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ LE+WK+ +YVLLK Y++C WSG GPK GD QAPEG Y + LNPNSKYFL
Sbjct: 73 SELEVWKKRRAGDYVLLKTYEMCRWSGDLGPKRAEGDRQAPEGIYEVTLGRLNPNSKYFL 132
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
S ++G+PN+ ++A +G LM+HG C+S+GC+A+ ++Q+ E+YA+VRD+LR Q +Q
Sbjct: 133 SFDLGYPNKLERAKGYSGTALMVHGACSSSGCFAITDEQITEVYALVRDALRAG-QPSVQ 191
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
+Q+ PFRMT +N+ + +NPN SFW LK FE + P + +Y F +
Sbjct: 192 VQSLPFRMTPENLARHYDNPNLSFWLDLKEASTTFEVLRRPPEFRFCEGRYRFGAAK 248
>gi|258544108|ref|ZP_05704342.1| lipoprotein [Cardiobacterium hominis ATCC 15826]
gi|258520616|gb|EEV89475.1| lipoprotein [Cardiobacterium hominis ATCC 15826]
Length = 453
Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 1/205 (0%)
Query: 30 EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
P + L ++ + P IRIFK E +LE+W + EY L +Y IC +SG
Sbjct: 33 RRPPNPTLQDRLEARGFRFGAPAFIRIFKKEEVLEVWLQKDSGEYALFLDYPICIYSGEL 92
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECAS 149
GPK GD+Q+PEGFY +G +NPNS+Y LS N+G+PN +D+AH +G+ LM+HG+C S
Sbjct: 93 GPKTREGDKQSPEGFYAVGREAMNPNSQYHLSFNLGYPNAYDRAHGYSGSMLMVHGKCVS 152
Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLK 209
GCYAM ++Q++EIY +V +L+ Q ++++ AFPFRMT N+ Y + Y FW MLK
Sbjct: 153 IGCYAMGDRQIEEIYTLVGSALQRG-QPYVRVHAFPFRMTDANLAAYSEHRWYDFWRMLK 211
Query: 210 LGHDYFEKNHQEPFIQIINKQYVFF 234
G+DYFE+ HQ P I +I QY
Sbjct: 212 PGYDYFERYHQPPEIDVIGGQYALS 236
>gi|317493141|ref|ZP_07951564.1| ykud domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918801|gb|EFV40137.1| ykud domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 241
Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats.
Identities = 91/239 (38%), Positives = 137/239 (57%), Gaps = 12/239 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M +L + L C S S + PL K+ P I+IFK E
Sbjct: 1 MGKIIALLAVFFVLPLTSCSSSASEQAQ-NTPLV---------KQQLLGSPVYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
LE++ + D +Y L++ + IC +SG GPK GD ++PEGFY + +L PNSK++
Sbjct: 51 RKLELFAKVQD-KYQLVQSFNICKFSGGLGPKRTEGDFKSPEGFYQVDARHLKPNSKFYQ 109
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIG+PN +D+AH +G LMIHG+C S GCYAM N+ + +IY V+ + R N Q+ +
Sbjct: 110 AINIGYPNAYDQAHGYSGKYLMIHGDCVSIGCYAMTNEGISQIYTYVQSAFR-NGQTLVN 168
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
I +PFRMT +NMQ ++N+ FW L+ G+ YF ++HQ P + ++N QYV + +
Sbjct: 169 INIYPFRMTEQNMQRHRNSDYLPFWKQLQPGYAYFNEHHQPPMVNVVNGQYVVNRPSAL 227
>gi|253689656|ref|YP_003018846.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756234|gb|ACT14310.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 244
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASETA----PPLAPIAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQPKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYVVNPP 228
>gi|238793948|ref|ZP_04637567.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC
29909]
gi|238726715|gb|EEQ18250.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC
29909]
Length = 235
Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats.
Identities = 90/224 (40%), Positives = 131/224 (58%), Gaps = 10/224 (4%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
+ L + S SE + +S + K+ I+IFK E LE++ R + E
Sbjct: 1 MGLPAVSFTSSA--------SEPVAVSKELKQQLLGSSVYIQIFKEERTLELYAR-LQGE 51
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
Y L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFPN++DK+
Sbjct: 52 YRLVQSYRICEFSGGLGPKRREGDFKSPEGFYSIDMRHLKPDSKFYRAINIGFPNDYDKS 111
Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193
+G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFRMT +NM
Sbjct: 112 QGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAFIFG-QEKVDISIYPFRMTEQNM 170
Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
Q ++N+ +YSFW L+ G+ YF KN P + +IN QYV +
Sbjct: 171 QRHRNSSDYSFWRQLQPGYAYFTKNRMPPSVAVINGQYVLSRPP 214
>gi|291616432|ref|YP_003519174.1| YafK [Pantoea ananatis LMG 20103]
gi|291151462|gb|ADD76046.1| YafK [Pantoea ananatis LMG 20103]
gi|327392872|dbj|BAK10294.1| lipoprotein YafK [Pantoea ananatis AJ13355]
Length = 266
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 8/232 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + + P+ + +S + K+ P I+IFK E LE++
Sbjct: 26 LLFAM-ILLPALSMAMT-----PEPVQQLAPVSKELKKQLIGTPVYIQIFKEERTLELYG 79
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 80 K-IGNEYRLLDTYRICNFSGGLGPKRREGDFKSPEGFYSVKMNQLKPDSRFYRAINIGFP 138
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+ +G LMIHG+C S GCYAM N M +I+ V +LR N Q + I +PFR
Sbjct: 139 NQYDRDQGYSGNYLMIHGDCKSIGCYAMTNAYMDQIFTYVNAALR-NGQQEVNIAIYPFR 197
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
MT NMQ ++ + FW L+ G+ YF + HQ P + + + +YV I
Sbjct: 198 MTESNMQRHRYSTYADFWKQLQPGYAYFAQYHQPPTVNVASGRYVMNSSPVI 249
>gi|304395395|ref|ZP_07377278.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
gi|304356689|gb|EFM21053.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
Length = 248
Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 8/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + + P+ +S + K+ P I+IFK E LE++
Sbjct: 6 LLFAM-ILLPALSMAMT-----PEPVQTAAPVSKELKKQLLGTPVYIQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-IGNEYRLLDTYRICNFSGGLGPKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N+FD+ +G LMIHG+C S GCYAM N M EI+ V +LR N Q + I +PFR
Sbjct: 119 NQFDRNQGYSGNYLMIHGDCKSIGCYAMTNAYMDEIFTYVNAALR-NGQQDVSISIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + + SFW L+ G+ YF K HQ P + + + +YV
Sbjct: 178 MTDSNMQRHRYSSDASFWQQLQPGYAYFAKYHQPPTVNVASGKYVMNSSPA 228
>gi|325498730|gb|EGC96589.1| hypothetical protein ECD227_2827 [Escherichia fergusonii ECD227]
Length = 244
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 137/230 (59%), Gaps = 7/230 (3%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
ILLFA+ I F + +S+ E P+S + ++ K P IRIFK E+
Sbjct: 9 ILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHPGDQLFIRIFKAED 67
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 68 KLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLA 127
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + +
Sbjct: 128 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSG-QKSVPV 186
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 187 HIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 236
>gi|161504584|ref|YP_001571696.1| hypothetical protein SARI_02698 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865931|gb|ABX22554.1| hypothetical protein SARI_02698 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 246
Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLMPCVSLAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 60 K-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFR
Sbjct: 119 NAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALIFG-QPSVQVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K +
Sbjct: 178 MTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPIVSIVDGRYVVSKPLS 228
>gi|170747478|ref|YP_001753738.1| hypothetical protein Mrad2831_1046 [Methylobacterium radiotolerans
JCM 2831]
gi|170654000|gb|ACB23055.1| protein of unknown function DUF949 [Methylobacterium radiotolerans
JCM 2831]
Length = 397
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + M +K + P + R +K E+ +E+WK+ YV +K + IC WSG GP
Sbjct: 32 PIPAATLALMAQKGVTAASPVLFRAYKKESEIEVWKKGAAG-YVYIKTFPICRWSGQLGP 90
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151
K +GD Q PEGFY + +NPNS Y+LS ++G+PN +D+AH TG+ +M+HG C+S G
Sbjct: 91 KRRSGDRQTPEGFYSVPRRQMNPNSHYYLSFDVGYPNAYDRAHGGTGSAVMVHGICSSMG 150
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
C+AM N + EIYAI RD+L Q+ Q Q++PFRMT++NM ++ +PN +FW LK G
Sbjct: 151 CFAMTNGTVGEIYAIARDAL-NGGQAAFQFQSYPFRMTAENMARHRTDPNIAFWRDLKAG 209
Query: 212 HDYFEKNHQEPFIQIINKQYVFFKGQ 237
D FE + +E + ++ +Y F +
Sbjct: 210 SDRFEVSREELQVSVVAGRYAFAPAR 235
>gi|157369197|ref|YP_001477186.1| hypothetical protein Spro_0952 [Serratia proteamaculans 568]
gi|157320961|gb|ABV40058.1| protein of unknown function DUF949 [Serratia proteamaculans 568]
Length = 256
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 17/232 (7%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ + ++ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PEVPVVKQQLV---------GSPVYIQIFKEERTLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNSFQICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + QS I I +
Sbjct: 113 GFPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAFAYG-QSRIDISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFRMT KN++ + ++ +FW LK G+DYF KNHQ P + + N QYV +
Sbjct: 172 PFRMTDKNLKRHSSSSYIAFWRQLKPGYDYFVKNHQPPMVSVANGQYVLGQP 223
>gi|90419248|ref|ZP_01227158.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336185|gb|EAS49926.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 362
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 93/224 (41%), Positives = 132/224 (58%), Gaps = 3/224 (1%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
I L S+ + A L+ + +RT P ++RIFK E+ LE+W++ D
Sbjct: 43 TAITLLSIGGCVSITEDAYTDLAPATLA--VAERTRPEGSILMRIFKEESELEVWRQGAD 100
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131
Y L K + +C WSG GPK GD QAPEGFY + + +NPNSKY S N+G+PN+ +
Sbjct: 101 GRYALHKTHPMCRWSGRLGPKTADGDRQAPEGFYQVTASLMNPNSKYHRSFNLGYPNQLE 160
Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
+A TG LM+HG C+SAGC+AM + + E+YA + + R QS Q+Q+FPFRMT++
Sbjct: 161 RALGYTGDSLMVHGACSSAGCFAMTDNGVAEVYAEAQSAFRIG-QSDFQVQSFPFRMTAE 219
Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
M +Q +PN FW LKLG+D FE +EP + +YVF
Sbjct: 220 QMAKHQGDPNIEFWRNLKLGYDVFEVTRREPTVAACGGRYVFDA 263
>gi|270263442|ref|ZP_06191711.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13]
gi|270042326|gb|EFA15421.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13]
Length = 255
Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats.
Identities = 93/232 (40%), Positives = 137/232 (59%), Gaps = 17/232 (7%)
Query: 8 LLFALFI---FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LLFA+ + C S + E P+ + ++ P I+IFK E LE
Sbjct: 6 LLFAMLFSMPMITACSASEQV---PEAPVVKQQLV---------GSPVYIQIFKEERTLE 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
++ + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INI
Sbjct: 54 LYAK-MGNEFRLVNSFRICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINI 112
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
GFPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + Q+ I I +
Sbjct: 113 GFPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAFAYG-QNRIDISIY 171
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFRMT +N++ ++++ + +FWN LK G+DYF KNH P + + N QYV +
Sbjct: 172 PFRMTEQNLKRHRSSSDIAFWNQLKPGYDYFVKNHLPPVVSVSNGQYVLGQP 223
>gi|227113590|ref|ZP_03827246.1| hypothetical protein PcarbP_11527 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 244
Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASEIA----PPLAPIAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +NM ++N+ SFW L+ G+ YF +++Q P + + N QYV
Sbjct: 180 MTEQNMHRHRNSTYASFWKQLQPGYAYFNQHNQPPAVTVFNGQYVVNPP 228
>gi|152992424|ref|YP_001358145.1| hypothetical protein SUN_0830 [Sulfurovum sp. NBC37-1]
gi|151424285|dbj|BAF71788.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 294
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
L ++ IRIFK E +LE+W + D EY LLKEYKICA+SG GPK++
Sbjct: 94 PLKEALSHAGARVGDAVFIRIFKREALLEVWIKK-DGEYKLLKEYKICAYSGRLGPKLKE 152
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAM 155
GD QAPEGFY + LNP+SK+ LS N+G+PN +D+A+ RTGA LM+HG C S GCYAM
Sbjct: 153 GDRQAPEGFYSVNRGRLNPHSKFHLSFNLGYPNAYDRAYGRTGAYLMVHGNCVSIGCYAM 212
Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF 215
+ +++EIY +V ++L+ Q +Q+ +PFRMT +NM Y + YSFW LK G+DYF
Sbjct: 213 TDAKIEEIYMLVEEALKKG-QKRVQVHIYPFRMTPENMAAYSHYRWYSFWQNLKEGYDYF 271
Query: 216 EKNHQEPFIQIINKQYV 232
E H P I + NK+Y+
Sbjct: 272 EAEHLPPKISVENKRYI 288
>gi|307132284|ref|YP_003884300.1| hypothetical protein Dda3937_04297 [Dickeya dadantii 3937]
gi|306529813|gb|ADM99743.1| conserved protein [Dickeya dadantii 3937]
Length = 241
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 92/232 (39%), Positives = 134/232 (57%), Gaps = 9/232 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L A+ L S S ++ P +E + P I+IFK E ILE++
Sbjct: 6 LSLAMLFVLPSVAISNSYANQVSPPATETT-------QQVAGSPVYIQIFKEERILELYA 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
R EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFP
Sbjct: 59 R-TGNEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+AH +G LMIHGEC S GCYAM N+ + EIY V +LR N Q +++ +PFR
Sbjct: 118 NEYDRAHGYSGRYLMIHGECVSIGCYAMTNQYIAEIYTYVEKALR-NGQQKVELAIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
M +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV + +
Sbjct: 177 MNEQNMKRHSRSTYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYVVNQPAPV 228
>gi|218550430|ref|YP_002384221.1| hypothetical protein EFER_3124 [Escherichia fergusonii ATCC 35469]
gi|218357971|emb|CAQ90617.1| conserved Hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 246
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 7/230 (3%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
ILLFA+ I F + +S+ E P+S + ++ K P IRI K E+
Sbjct: 11 ILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHPGDQLFIRILKAED 69
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 70 KLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLA 129
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + +
Sbjct: 130 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSG-QKSVPV 188
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 189 HIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 238
>gi|254470197|ref|ZP_05083601.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062]
gi|211960508|gb|EEA95704.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062]
Length = 247
Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats.
Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 2/228 (0%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+ +FA ++ L + + K + L + K P +R+FK E+ LE W
Sbjct: 21 LAVFATYLLLPYDLPGSANLTKVKEERLPALRADLTFKGMELGSPVFLRVFKEESRLEAW 80
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
R Y K ++IC +SG GPK++ GD Q+PEGFY + LNPNS+Y LS N+GF
Sbjct: 81 IR-SGETYHPYKSWEICKYSGDLGPKLKEGDGQSPEGFYNVSARQLNPNSQYHLSFNLGF 139
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN FD++ RTG+ LM+HG C S GCYAM N+ ++EIY +V +L+ Q + + FPF
Sbjct: 140 PNTFDQSMGRTGSYLMVHGNCLSIGCYAMTNQHIEEIYLLVEAALQSG-QGTVPVHIFPF 198
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
MT +N+ + ++ + FW LK G+D FE+N P + QY F
Sbjct: 199 EMTEENLSKHSSSKWHPFWRNLKQGYDLFEQNRIPPAVSAQEGQYQFT 246
>gi|261822679|ref|YP_003260785.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
gi|261606692|gb|ACX89178.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
Length = 244
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 133/229 (58%), Gaps = 6/229 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + + I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASETS----PPLAPIAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSHYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M IY +LR N Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDVIYRYAEAALR-NGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYVVNPP 228
>gi|251788530|ref|YP_003003251.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
gi|247537151|gb|ACT05772.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
Length = 241
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 140/231 (60%), Gaps = 7/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F+L + S ++ +PLS ++ + K+ P I+IFK E +LE++
Sbjct: 4 VAFSLAMLF--ILPSVAINSSYANPLSP---VATETKQQVTGSPVYIQIFKEERVLELYA 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFP
Sbjct: 59 M-IGGEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLRQLKPDSHYYRAINVGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+AH +G LMIHGEC S GCYAM NK ++EIY V +LR N Q +++ +PFR
Sbjct: 118 NEYDRAHGYSGRYLMIHGECVSIGCYAMTNKYIEEIYTYVEKALR-NGQQKVELAIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV +
Sbjct: 177 MTEQNMKRHSRSNYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYVVNQSSP 227
>gi|284923183|emb|CBG36277.1| putative exported protein [Escherichia coli 042]
Length = 239
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F H + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKELLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|331664773|ref|ZP_08365678.1| putative inner membrane protein [Escherichia coli TA143]
gi|331058021|gb|EGI30003.1| putative inner membrane protein [Escherichia coli TA143]
Length = 239
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F H + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFAMNEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|308185804|ref|YP_003929935.1| hypothetical protein Pvag_0272 [Pantoea vagans C9-1]
gi|308056314|gb|ADO08486.1| Uncharacterized protein yafK precursor [Pantoea vagans C9-1]
Length = 247
Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats.
Identities = 92/231 (39%), Positives = 134/231 (58%), Gaps = 9/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ I L + + + P+S+ L K+ P I+IFK E LE++
Sbjct: 6 LLFAM-ILLPALSMAMTPEPVSAAPVSKEL------KKQLLGTPVYIQIFKEERTLELYG 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + E+ LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFP
Sbjct: 59 K-IGNEFRLLDTYRICNFSGGLGPKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+ +G LMIHG+C S GCYAM N M EI+ V +LR N Q + I +PFR
Sbjct: 118 NQYDRNQGYSGNYLMIHGDCKSIGCYAMTNAYMDEIFTYVNAALR-NGQQDVGISIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + + SFW L+ G+ YF K HQ P + + + +YV
Sbjct: 177 MTDSNMQRHRYSSDASFWQQLQPGYAYFAKYHQPPMVNVASGKYVMNSSPA 227
>gi|50122394|ref|YP_051561.1| hypothetical protein ECA3471 [Pectobacterium atrosepticum SCRI1043]
gi|49612920|emb|CAG76370.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 244
Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 135/229 (58%), Gaps = 6/229 (2%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+ FL + + + A I+ + K+ P I+IFK E I E++
Sbjct: 6 LSFAMLFFLPSLVVTSAASEIA----PPLAPIAKELKQQLLGSPIYIQIFKEERIFELYA 61
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFP
Sbjct: 62 K-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFP 120
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DK+ +G LMIHGEC S GCYAM N M EIY +LR + Q+ I I +PFR
Sbjct: 121 NDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDEIYRYADAALR-HGQAKIDIAIYPFR 179
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +NMQ ++++ SFW L+ G+ YF +++Q P I + N QYV
Sbjct: 180 MTEQNMQRHRSSTYASFWKQLQPGYTYFNQHNQPPAITVFNGQYVVNPP 228
>gi|300715465|ref|YP_003740268.1| hypothetical protein EbC_08790 [Erwinia billingiae Eb661]
gi|299061301|emb|CAX58410.1| Putative exported protein [Erwinia billingiae Eb661]
Length = 246
Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 7/232 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + P+ +S + K+ P I+IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFASV----PTSPVLPLAPVSKELKKQLLGTPVYIQIFKEERTLELYG 60
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + +Y LL Y+IC +SG GPK GD ++PEGFY +G + L P+S+++ +IN+GFP
Sbjct: 61 K-IGNDYRLLDSYRICNFSGGLGPKRRQGDFKSPEGFYSVGLSQLKPDSRFYRAINVGFP 119
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + + +IY V +LR N Q +++ +PFR
Sbjct: 120 NEYDRQQGYEGKYLMIHGSCVSIGCYAMTDANIADIYQFVDAALR-NGQPRVEVSIYPFR 178
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
MT N+Q ++N+ YSFW L+ G+ F +N P + + YV + ++
Sbjct: 179 MTDSNLQRHRNSVYYSFWKQLQPGYAQFVQNRLPPSVSVNEGHYVLNQPGSL 230
>gi|261346249|ref|ZP_05973893.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282565557|gb|EFB71092.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 245
Score = 300 bits (770), Expect = 9e-80, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
E LI ++ I+IFK E +LE++++ D ++ L+K Y IC +SG GPK
Sbjct: 25 ETLINLNERANIEQKSSIFIQIFKQEGVLELYQKASDGKFKLVKTYPICKFSGGLGPKKI 84
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYA 154
GD ++PEGFY I LNPNS+++ SIN+GFPN+FDKA TG LMIHG C S GCYA
Sbjct: 85 EGDLKSPEGFYQITAEQLNPNSQFYRSINLGFPNDFDKAQGYTGNYLMIHGSCVSTGCYA 144
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214
M +K M EIY V +L+ N Q I + +PFRMT NM Y+N+ +Y+FW L+ +DY
Sbjct: 145 MTDKSMGEIYQTVERALQ-NGQPIIDVNIYPFRMTKTNMLRYRNSSHYAFWKQLQPAYDY 203
Query: 215 FEKNHQEPFIQIINKQYVFFKGQ 237
FE+ + +I +Y
Sbjct: 204 FERTKTPAEVSVILGKYNVNSMP 226
>gi|310766742|gb|ADP11692.1| hypothetical protein EJP617_20110 [Erwinia sp. Ejp617]
Length = 244
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 7/233 (3%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
I L IFL + + A PL+ +S + ++ P ++IFK E LE+
Sbjct: 3 KIALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLEL 57
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+G
Sbjct: 58 YGK-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVG 116
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +P
Sbjct: 117 FPNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIEVSIYP 175
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
FRMT NMQ ++ + +FW L+ G+ F + Q P + + +YV + T
Sbjct: 176 FRMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVLSRPLT 228
>gi|292487367|ref|YP_003530239.1| hypothetical protein EAMY_0881 [Erwinia amylovora CFBP1430]
gi|292898612|ref|YP_003537981.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291198460|emb|CBJ45568.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291552786|emb|CBA19831.1| Uncharacterized protein yafK precursor [Erwinia amylovora CFBP1430]
gi|312171472|emb|CBX79730.1| Uncharacterized protein yafK precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 244
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 130/229 (56%), Gaps = 8/229 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + ++ +S + ++ P ++IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFAS-----VNETITPLAPVSKELRKQLIGIPVYLQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL + IC +SG GPK GD ++PEGFY + + L P+S+Y+ +IN+GFP
Sbjct: 60 K-IGNEYRLLNSFPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRYYRAINVGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +PFR
Sbjct: 119 NEYDRQQGYQGKYLMIHGNCVSIGCYAMTDAYMDEIYRYVEAALR-NGQPRIEVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT+ NMQ ++ + +FW L+ G+ FE+ Q P + + +YV +
Sbjct: 178 MTASNMQRHRYSTYINFWKQLQPGYAQFEQTKQPPAVAVSAGKYVLSRP 226
>gi|205354181|ref|YP_002227982.1| hypothetical protein SG3168 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273962|emb|CAR38967.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629302|gb|EGE35645.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 239
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 94/232 (40%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I+L +LFI + D+ + L ++ K P IRI K E+ LE
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDE-DVYLPVEKTVASSLKIIHPGDQLFIRILKAEDKLE 65
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+ NI
Sbjct: 66 LWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNI 125
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + + F
Sbjct: 126 GYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKRVPVHIF 184
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 185 PFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|324115247|gb|EGC09211.1| ykud domain-containing protein [Escherichia fergusonii B253]
Length = 246
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 135/230 (58%), Gaps = 7/230 (3%)
Query: 7 ILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
ILLFA+ I F + +S+ E P+S + ++ K IRI K E+
Sbjct: 11 ILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQ-PSKVIHHGDQLFIRILKAED 69
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y L+
Sbjct: 70 KLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLA 129
Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + +
Sbjct: 130 FNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKSG-QKSVPV 188
Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 189 HIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRY 238
>gi|62178883|ref|YP_215300.1| hypothetical protein SC0313 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126516|gb|AAX64219.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322713335|gb|EFZ04906.1| hypothetical protein SCA50_0331 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 207
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 118/191 (61%), Gaps = 2/191 (1%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY +
Sbjct: 1 MGSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSV 59
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V
Sbjct: 60 QRNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFV 119
Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQII 227
+L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I+
Sbjct: 120 TAALVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIV 178
Query: 228 NKQYVFFKGQT 238
+ +YV K +
Sbjct: 179 DGRYVVSKPLS 189
>gi|16766575|ref|NP_462190.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62181788|ref|YP_218205.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167990158|ref|ZP_02571258.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197263468|ref|ZP_03163542.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62129421|gb|AAX67124.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|197241723|gb|EDY24343.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205331143|gb|EDZ17907.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248443|emb|CBG26280.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995473|gb|ACY90358.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159827|emb|CBW19346.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914303|dbj|BAJ38277.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225961|gb|EFX51015.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716275|gb|EFZ07846.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323131637|gb|ADX19067.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990135|gb|AEF09118.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 239
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F + + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|198245601|ref|YP_002217251.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|207858527|ref|YP_002245178.1| hypothetical protein SEN3112 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197940117|gb|ACH77450.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|206710330|emb|CAR34688.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326625028|gb|EGE31373.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 239
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F + + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKRV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|300024683|ref|YP_003757294.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526504|gb|ADJ24973.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 295
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P + ++ P ++RIFK E LE+W + D + Y IC WSG G
Sbjct: 75 QPDLARFSERLAEQGLKEGAPVLVRIFKREFELELWMQR-DGAFRRFATYPICRWSGWLG 133
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PK+ GD QAPEGFY + + LNPNS++F S N+G+PN FD+A RTG+ +M+HG C S
Sbjct: 134 PKLVEGDRQAPEGFYTVEASALNPNSRWFRSFNLGYPNAFDRAQGRTGSLIMVHGGCGSI 193
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM N QM EI+ +V +L G Q Q+Q +PFRM+ ++ + +P+ +FW LK
Sbjct: 194 GCFAMTNGQMAEIWRLVTAAL-GGGQKRFQVQVYPFRMSEAELKAHAKDPDIAFWRDLKA 252
Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKGQ 237
GHD FE N P + + +Y F G
Sbjct: 253 GHDLFEANAVPPTVSVCKGRYQFQAGA 279
>gi|271501763|ref|YP_003334789.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
gi|270345318|gb|ACZ78083.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
Length = 241
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 9/230 (3%)
Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69
A+ L S S ++ ++ + K+ P I+IFK E +LE++
Sbjct: 8 LAMLFILPSVAISNSYANQVSP-------VATETKQQVAGSPVYIQIFKEERVLELYAM- 59
Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129
+ EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFPNE
Sbjct: 60 IGGEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFPNE 119
Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189
+D+AH +G LMIHGEC S GCYAM NK ++EIY V +LR N Q +++ +PFRMT
Sbjct: 120 YDRAHGYSGRYLMIHGECVSIGCYAMTNKYIEEIYTYVEKALR-NGQQKVELAIYPFRMT 178
Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
+NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV + +
Sbjct: 179 EQNMKRHSRSNYYKFWSQLQPGYAYFNRMHQPPAVSVLNGQYVVNQSAPV 228
>gi|146328753|ref|YP_001209058.1| lipoprotein [Dichelobacter nodosus VCS1703A]
gi|146232223|gb|ABQ13201.1| hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
Length = 248
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 93/243 (38%), Positives = 138/243 (56%), Gaps = 13/243 (5%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSE-----------NLIISMQKKRTSPFHP 51
NR ++ F+L ++ C + + E P S L ++ + P
Sbjct: 2 NRLFLIFFSLLALIS-CRAPEQNVVREEAPFSRLPAGVQNWWNLPLARHLEVRGFQLGAP 60
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+RIFK E +LE+W + D Y L +++ ICA+SG GPK+ GD+QAPEG YY+G +
Sbjct: 61 VFVRIFKEERVLELWLKKDDDRYHLYQKFPICAFSGQLGPKVRRGDKQAPEGIYYVGLSQ 120
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
LNPNS++ L+ N+GFPN +D+AH TG LM+HG C S GCYAM ++Q++EIY I+ +L
Sbjct: 121 LNPNSRFHLAFNLGFPNLYDRAHGYTGDYLMVHGNCVSNGCYAMGDEQIEEIYQIIEAAL 180
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
+ Q + + FPF +T N+ YQ + Y FW MLK +DYFE P +Q+ +Y
Sbjct: 181 -WHGQPSVPVHIFPFPLTPANLAKYQYHRWYDFWQMLKPAYDYFEHYATPPVVQVNAGRY 239
Query: 232 VFF 234
Sbjct: 240 ELN 242
>gi|218706781|ref|YP_002414300.1| hypothetical protein ECUMN_3641 [Escherichia coli UMN026]
gi|293406771|ref|ZP_06650697.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298382511|ref|ZP_06992108.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300897922|ref|ZP_07116301.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|218433878|emb|CAR14795.1| conserved Hypothetical protein [Escherichia coli UMN026]
gi|291426777|gb|EFE99809.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298277651|gb|EFI19167.1| conserved hypothetical protein [Escherichia coli FVEC1302]
gi|300358352|gb|EFJ74222.1| conserved hypothetical protein [Escherichia coli MS 198-1]
Length = 239
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F H + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASTNNKPYELYKTRTICAWSGGLGPKHKQGDGKSPEGFYATNKELLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784589|emb|CAE13489.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 247
Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats.
Identities = 94/202 (46%), Positives = 121/202 (59%), Gaps = 1/202 (0%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
L+ Q P P I+IFK E ILE++ +N Y L K Y IC +SG GPK
Sbjct: 29 TLVQLQQNFPVQPGSPVFIQIFKEERILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTE 88
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAM 155
GD ++PEGFY + + LNPNS+Y+ SIN+GFPNE+DK +G LMIHGEC S GCYAM
Sbjct: 89 GDLKSPEGFYRVKTHQLNPNSRYYRSINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAM 148
Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF 215
N M EIY V +L Q I I +PFRMT +NM ++++ +Y FW L+ ++YF
Sbjct: 149 TNGYMDEIYHYVESALLRG-QYEINISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYF 207
Query: 216 EKNHQEPFIQIINKQYVFFKGQ 237
KNHQ + IIN QYV
Sbjct: 208 AKNHQPATVSIINGQYVVNATP 229
>gi|317047049|ref|YP_004114697.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
gi|316948666|gb|ADU68141.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
Length = 248
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 125/229 (54%), Gaps = 3/229 (1%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
+ +FL P++ +S + K+ P I+IFK E LE++ + +
Sbjct: 4 IALFLAMIVMPVLSWAMTPEPVNPQAPVSKELKKQLLGTPVYIQIFKEERTLELYGK-IG 62
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131
EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S Y+ +IN GFPN+FD
Sbjct: 63 NEYRLLDSYRICNFSGGLGPKRREGDFKSPEGFYSVKLNQLKPDSHYYRAINTGFPNQFD 122
Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
+ + G LMIHG+C S GCYAM N M EIY V +LR N Q I + FPFRMT
Sbjct: 123 RDNGYNGKYLMIHGDCKSIGCYAMTNAYMDEIYTYVNAALR-NGQQEIALSIFPFRMTDS 181
Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN-KQYVFFKGQTI 239
NMQ ++ + SFW L+ G+ YFEK Q P + + QY +
Sbjct: 182 NMQRHRYSTYASFWRQLQPGYAYFEKYRQPPTVNVTATGQYAVNSSPAV 230
>gi|22124856|ref|NP_668279.1| hypothetical protein y0949 [Yersinia pestis KIM 10]
gi|108811018|ref|YP_646785.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516]
gi|229901240|ref|ZP_04516362.1| putative exported protein precursor [Yersinia pestis Nepal516]
gi|270489430|ref|ZP_06206504.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|21957687|gb|AAM84530.1|AE013698_4 hypothetical protein y0949 [Yersinia pestis KIM 10]
gi|108774666|gb|ABG17185.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516]
gi|229681169|gb|EEO77263.1| putative exported protein precursor [Yersinia pestis Nepal516]
gi|270337934|gb|EFA48711.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|320016430|gb|ADW00002.1| putative exported protein precursor [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 220
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+ +S + K+ I+IFK E +LE++ + + EY L++ Y IC +SG GPK G
Sbjct: 1 MAVSKELKQQLLGSSVYIQIFKEERVLELYAK-LQGEYRLVQSYPICEFSGGLGPKRREG 59
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMN 156
D ++PEGFY I +L P+S+++ +INIGFPN++DK+ +G LMIHG C S GCYAM
Sbjct: 60 DFKSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMT 119
Query: 157 NKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFE 216
+ M EI+ VR + Q + I +PFRMT +N+Q ++N+ +FW L+ G+ YF
Sbjct: 120 DAYMDEIFNYVRTAFIFG-QEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFA 178
Query: 217 KNHQEPFIQIINKQYVFFKGQ 237
KN P + + N QYV
Sbjct: 179 KNRMPPPVSVSNGQYVLSPPP 199
>gi|168231886|ref|ZP_02656944.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194469493|ref|ZP_03075477.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248083|ref|YP_002148204.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|194455857|gb|EDX44696.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197211786|gb|ACH49183.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|205333905|gb|EDZ20669.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 239
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F + + E P+ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDEHIYLPVEKPVVSSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M KNM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFTMNDKNMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|224585075|ref|YP_002638874.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224469603|gb|ACN47433.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 239
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 95/237 (40%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F + + E P++ +L K P RI K
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSL------KIIHPGDQLFTRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q +
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKSV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|188534726|ref|YP_001908523.1| hypothetical protein ETA_26010 [Erwinia tasmaniensis Et1/99]
gi|188029768|emb|CAO97647.1| Putative exported protein [Erwinia tasmaniensis Et1/99]
Length = 244
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 89/231 (38%), Positives = 131/231 (56%), Gaps = 8/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ IFL + + + PL+ +S + ++ P ++IFK E LE++
Sbjct: 6 LLFAM-IFLPAVVFAS--VTETATPLAP---VSKELRKQLIGVPVYLQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y IC +SG GPK GD ++PEGFY + + L PNS+++ +IN+GFP
Sbjct: 60 K-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYNVSLSQLKPNSRFYRAINVGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I + +PFR
Sbjct: 119 NEYDRQQGYQGNYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIDVSIYPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NMQ ++ + +FW L+ G+ F + Q P + + +YV + T
Sbjct: 178 MTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAMAVNAGKYVLDRPLT 228
>gi|161616283|ref|YP_001590248.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365647|gb|ABX69415.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 239
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)
Query: 5 YNILLFALFI-----FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
I+L +LFI F + + E P++ +L K P IRI K
Sbjct: 7 LAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSL------KIIHPGDQLFIRILKA 60
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y
Sbjct: 61 EDKLELWVSANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q ++
Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSG-QKNV 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
+ FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y
Sbjct: 180 PVHIFPFTMDDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPT 236
>gi|227329184|ref|ZP_03833208.1| hypothetical protein PcarcW_18350 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 231
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
+ A I+ + K+ P I+IFK E I E++ + V EY LL++Y IC
Sbjct: 6 VTSAASETAPPLAPIAKELKQQLLGSPIYIQIFKEERIFELYAK-VGNEYRLLEQYPICK 64
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
+SG GPK GD ++PEGFY + L P+S+Y+ +INIGFPN++DK+ +G LMIH
Sbjct: 65 YSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRYLMIH 124
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204
GEC S GCYAM N M EIY +LR N Q+ I I +PFRMT +NMQ ++N+ SF
Sbjct: 125 GECVSVGCYAMTNTYMDEIYRYAEAALR-NGQAKIDIAIYPFRMTEQNMQRHRNSTYASF 183
Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
W L+ G+ YF +++Q P + + N QYV
Sbjct: 184 WKQLQPGYAYFNQHNQPPAVTVFNGQYVVNPP 215
>gi|238918831|ref|YP_002932345.1| hypothetical protein NT01EI_0895 [Edwardsiella ictaluri 93-146]
gi|238868398|gb|ACR68109.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 240
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 12/238 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M IL L + L S S I + + I+IFK E
Sbjct: 1 MGKIVAILAICLTLPLAASKSSASESG----------ITPLNDANSLLGSQVYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
LE++ + D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+
Sbjct: 51 RQLELYAKVQD-KYRLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIG+PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ +
Sbjct: 110 AINIGYPNSFDQSHGYSGNYLMIHGDCVSIGCYAMTNDGISEIYRYVQSAFRSG-QTLVN 168
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
I +PFRMT +NMQL++N+ FW L+ G+ YF +N P + + + +YV
Sbjct: 169 INIYPFRMTDRNMQLHRNSSYIGFWRQLQPGYQYFAQNALPPQVNVQDGRYVVSGALP 226
>gi|242238374|ref|YP_002986555.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
gi|242130431|gb|ACS84733.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
Length = 249
Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats.
Identities = 89/227 (39%), Positives = 131/227 (57%), Gaps = 2/227 (0%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L A+ FL + A + Q ++++ P I+IFK E +LE++
Sbjct: 6 LSLAMLFFLPSVAINSHAAQTAPVTTNTTQQPLQQPQQSAIGSPVYIQIFKEERVLELYS 65
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ +Y L++ Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +IN+GFP
Sbjct: 66 K-SGNDYRLVQSYPICKFSGGLGPKKTEGDFKSPEGFYQVDLRQLKPDSRYYRAINVGFP 124
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+D+A +G LMIHGEC S GCYAM NK + EIY V +LR N Q + I +PFR
Sbjct: 125 NEYDRAQGYSGRYLMIHGECVSIGCYAMTNKSIDEIYTYVEKALR-NGQQKVDIAIYPFR 183
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
MT +NM+ + + +Y FW+ L+ G+ +F HQ P + + N QYV
Sbjct: 184 MTEQNMKRHSRSVDYKFWSQLQPGYAFFNLTHQPPAVSVANGQYVIN 230
>gi|329296658|ref|ZP_08253994.1| ErfK/YbiS/YcfS/YnhG family protein [Plautia stali symbiont]
Length = 247
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 9/233 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
LLFA+ + S ++ + PL+ +S + K+ P I+IFK E LE++
Sbjct: 6 LLFAMILM---PLLSWAMTPEPMQPLAP---VSKELKKQLLGTPVFIQIFKEERTLELYG 59
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ + EY LL Y+IC SG GPK GD ++PEGFY + N L P+S+++ +IN GFP
Sbjct: 60 K-IGNEYRLLDSYRICNISGGLGPKRRQGDFKSPEGFYNVKMNQLKPDSRFYRAINTGFP 118
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++D+A G LMIHG+C S GCYAM N M EI+ V +LR N Q +Q+ FPFR
Sbjct: 119 NQYDRAKGYNGNYLMIHGDCVSVGCYAMTNASMDEIFTYVNAALR-NGQQDVQVNIFPFR 177
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN-KQYVFFKGQTI 239
MT NMQ ++ + SFW L+ G+ YF K H P + + QY +
Sbjct: 178 MTDSNMQRHRYSTYISFWRELQPGYAYFAKYHVPPTVNVTATGQYAVNNTPVM 230
>gi|259909352|ref|YP_002649708.1| hypothetical protein EpC_27230 [Erwinia pyrifoliae Ep1/96]
gi|224964974|emb|CAX56502.1| Putative exported protein [Erwinia pyrifoliae Ep1/96]
gi|283479424|emb|CAY75340.1| Uncharacterized protein yafK precursor [Erwinia pyrifoliae DSM
12163]
Length = 243
Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats.
Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 7/231 (3%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
I L IFL + + A PL+ +S + ++ P ++IFK E LE+
Sbjct: 3 KIALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLEL 57
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+G
Sbjct: 58 YGK-IGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVG 116
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +P
Sbjct: 117 FPNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHHVEAALR-NGQPRIEVSIYP 175
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
FRMT NMQ ++ + +FW L+ G+ F + Q P + + +YV +
Sbjct: 176 FRMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVLSRP 226
>gi|312112882|ref|YP_004010478.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311218011|gb|ADP69379.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 288
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSE-----NLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
I L R L K PL L + +K P IRIFK E LE+W R
Sbjct: 42 IRLAAHDAQRVLYAKLGWPLPGTPDLGRLNERLAEKGLERGAPVFIRIFKRERELELWMR 101
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
D+ +VL Y +C SG GPK+ GD QAPEGFY +G + LNPNS Y S N+G+PN
Sbjct: 102 GGDS-FVLFASYPVCRHSGGLGPKLREGDRQAPEGFYTVGRSQLNPNSAYRRSFNLGYPN 160
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
+D A+ RTG+ LM+HG C S GCYAM + + EI+ +V +L Q FPFRM
Sbjct: 161 LYDAANGRTGSFLMVHGACLSVGCYAMTDPVIDEIWELVTAALDRG-QKRFSAHVFPFRM 219
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+ ++ ++ P FW LK G+D FE + P I + K+YV G
Sbjct: 220 SEAHLAIHDRAPWGEFWRDLKRGYDLFEASRTPPRIGVCAKRYVARSGAA 269
>gi|315499814|ref|YP_004088617.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48]
gi|315417826|gb|ADU14466.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48]
Length = 240
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 130/201 (64%), Gaps = 2/201 (0%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
++ ++ + P +IRIFK + LE+W + +Y L K ++IC+WSG+ GPK +
Sbjct: 42 SHIRAALTRNDLQLGQPILIRIFKETDELELWVK-SGGKYRLYKTFRICSWSGSLGPKKK 100
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYA 154
GD Q+PEGFY + + P+S+Y L+ N+G+PN FD+A+ R G+ LM+HG+CAS GCYA
Sbjct: 101 EGDGQSPEGFYTVSRGQMKPDSQYHLAFNLGYPNAFDRANGRIGSYLMVHGKCASIGCYA 160
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214
M +K ++EI+ I ++L+G Q+ Q+ +PFRMT +++ + +P FW LK G+D
Sbjct: 161 MTDKGIEEIWLIADEALKGG-QTAFQVHVYPFRMTDAHIKRHVGSPWLGFWTDLKAGYDR 219
Query: 215 FEKNHQEPFIQIINKQYVFFK 235
FE+NH + + ++NK+Y
Sbjct: 220 FEQNHSDLNVTVVNKRYRVTP 240
>gi|212709370|ref|ZP_03317498.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM
30120]
gi|212688282|gb|EEB47810.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM
30120]
Length = 245
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
K T P I+IFK E +LE++++ +Y L+K Y IC +SG GPK GD ++PE
Sbjct: 33 KPATQPDSSIFIQIFKQEGVLELYQKTAVGKYKLVKTYPICKFSGGLGPKKMEGDLKSPE 92
Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQE 162
GFY I + LNPNS+Y+ SIN+GFPNEFDK +G LMIHG C S GCYAM +K M E
Sbjct: 93 GFYQITHSQLNPNSRYYRSINLGFPNEFDKTQGYSGNYLMIHGSCVSVGCYAMTDKSMGE 152
Query: 163 IYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEP 222
IY IV +L+ N Q I + +PFRMT NM Y+N+ +Y+FW L+ +DYFE+
Sbjct: 153 IYQIVEQALQ-NGQPAIDVSIYPFRMTKMNMLRYRNSAHYAFWKQLQPAYDYFERTGNPA 211
Query: 223 FIQIINKQYVFFKGQ 237
I + +Y
Sbjct: 212 EISVTLGKYHVNSMP 226
>gi|183596299|ref|ZP_02958327.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827]
gi|188023899|gb|EDU61939.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827]
Length = 245
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
I+IFK E +LE++++ + +Y L K Y IC +SG GPK GD ++PEGFY
Sbjct: 37 QQNSAIFIQIFKQEGVLELYQKAPNGKYNLSKTYPICKFSGGLGPKKREGDLKSPEGFYQ 96
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAI 166
I + LNPNS+Y+ SIN+GFPNE+D+A G LMIHG+C S GCYAM +K M EIY
Sbjct: 97 ITASQLNPNSRYYRSINLGFPNEYDRAQGYEGNYLMIHGDCVSVGCYAMTDKYMSEIYQT 156
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226
V + + Q+ I + +PFRMT +NM +++N+ +Y+FW LK +DYF+ + I +
Sbjct: 157 VESAFKSG-QNTIDVSIYPFRMTKENMLIHRNSSHYAFWQQLKPAYDYFQDAGKPAQISV 215
Query: 227 INKQYVFFKGQ 237
+ +Y
Sbjct: 216 TSGKYAVNSLP 226
>gi|269119360|ref|YP_003307537.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC
33386]
gi|268613238|gb|ACZ07606.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC
33386]
Length = 247
Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 10/235 (4%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQ---------KKRTSPFHPTVIRI 56
L F +FI ++ +ID+ E ++ + + + ++ +P IR+
Sbjct: 10 LALFFLVFIGISNKISFEKVIDEGEEIINTISLGNKEYRNSGEKGGQENIKTGNPLYIRV 69
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK E LE+W +N Y L K + IC +SG GPK + GD+++PEGFYY + LNPNS
Sbjct: 70 FKEEKELEMWIKNDSGTYSLYKVFDICTFSGGLGPKKKEGDKKSPEGFYYTQKSFLNPNS 129
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
Y LS NIG+PNE+DK+H TG+ +MIHG+C S GCYAM +K ++EIY +V +L N Q
Sbjct: 130 AYHLSFNIGYPNEYDKSHGYTGSLIMIHGDCLSIGCYAMTDKYIEEIYGLVEKTL-NNGQ 188
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
I + FPF+MT+ NM+ ++ + YSFW LK G+DYFEKN P + + NK+Y
Sbjct: 189 EKINVDVFPFKMTAANMKRHKKSEYYSFWEELKPGYDYFEKNKIPPRMTVENKKY 243
>gi|320540146|ref|ZP_08039801.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320029812|gb|EFW11836.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 253
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 135/229 (58%), Gaps = 11/229 (4%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L FA+F+ + + P+ + ++ P I+IFK E LE++
Sbjct: 6 LWFAMFLAMPILTACSANTQLPALPVVQQQLV---------GAPVYIQIFKEERTLELYT 56
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ D ++ L K ++IC++SG GPK + GD ++PEGFY I +L P+S+Y+ +INIGFP
Sbjct: 57 KIGD-QFRLAKSFRICSFSGGLGPKRQQGDFKSPEGFYSIDVRHLKPDSQYYRAINIGFP 115
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N++DKA +GA LMIHGEC S GCYAM N M EIY V + QS I I +PFR
Sbjct: 116 NDYDKAQGYSGAYLMIHGECKSIGCYAMTNTAMGEIYRYVAAAFAYG-QSRIDISIYPFR 174
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
MT +N+Q ++++ +FW L+ G++YF KN Q P + + N QYV +
Sbjct: 175 MTKQNLQRHRSSSYIAFWRQLEPGYNYFVKNQQPPRMAVANGQYVLNRP 223
>gi|322831680|ref|YP_004211707.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
gi|321166881|gb|ADW72580.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
Length = 241
Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 135/231 (58%), Gaps = 7/231 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ L + L+ + + ++ + ++ K+ P I+IFK E LE++
Sbjct: 4 IALFLAMLLSLPLFTANYAVASD-----AVPVNAALKKQLLGAPVYIQIFKQERKLELYA 58
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+ +D E+ L+ Y IC +SG G K GD ++PEGFY + ++L P+S+++ +INIGFP
Sbjct: 59 Q-LDGEFRLIGSYGICDFSGGLGNKRREGDFKSPEGFYNVDIHHLKPDSRFYRAINIGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
N +D + +G LMIHG C S GCYAM + M EI+ V+ + + Q +++I +PFR
Sbjct: 118 NAYDISQGYSGKYLMIHGNCKSIGCYAMTDGYMDEIFTYVQAAFQFG-QRNLKISIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
MT NM+ ++N+ YSFWN L+ G+ YFEK+HQ P + + + +Y + +
Sbjct: 177 MTDANMKAHKNSSYYSFWNQLQPGYAYFEKHHQPPNVVVTDGRYEVLQPLS 227
>gi|253990732|ref|YP_003042088.1| exported protein YafK [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253782182|emb|CAQ85346.1| putative exported protein YafK [Photorhabdus asymbiotica]
Length = 244
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 124/227 (54%), Gaps = 8/227 (3%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
FA I + SL I T +P I+IFK E ILE++
Sbjct: 5 AAFAAIILM----FFSSLPPTYAQDTP---IELKSTPSTQLGYPVFIQIFKEERILELYT 57
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
++ Y L K Y IC +SG GPK GD ++PEGFY + + LNPNS+Y+ SIN+GFP
Sbjct: 58 KDSHGNYQLAKSYPICNYSGGLGPKTMEGDLKSPEGFYRVKTSQLNPNSRYYRSINLGFP 117
Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
NE+DK+ +G LMIHGEC S GCYAM N M EIY V +L N Q I I +PFR
Sbjct: 118 NEYDKSRGYSGNYLMIHGECKSVGCYAMTNNYMNEIYHYVESALL-NGQYEINISIYPFR 176
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
MT +NM +Q + +Y FW L+ ++YF K + I +IN QY
Sbjct: 177 MTPQNMLRHQASSHYMFWLQLQPAYEYFIKTRRPAAISVINNQYAVN 223
>gi|268593097|ref|ZP_06127318.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
gi|291311366|gb|EFE51819.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
Length = 245
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
I+IFK E +LE++++ +Y L K Y IC +SG GPK GD ++PEGFY I
Sbjct: 42 IFIQIFKQEGLLELYQKTPSGKYKLSKTYPICKFSGGLGPKKIEGDLKSPEGFYQITAEQ 101
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171
LNPNS+Y+ SINIGFPNEFDKA +G+ LMIHG C S GCYAM +K M EIY V +L
Sbjct: 102 LNPNSRYYRSINIGFPNEFDKAQGYSGSYLMIHGSCVSVGCYAMTDKYMGEIYQTVETAL 161
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231
QS I + +PF+MT++NM Y+N+ +Y+FW L+ ++YF + + + + +Y
Sbjct: 162 LSG-QSVINVSIYPFKMTNENMLRYRNSSHYAFWKQLQPAYEYFNRTGRPAEVSVALGKY 220
Query: 232 VF 233
Sbjct: 221 AV 222
>gi|296446177|ref|ZP_06888125.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
gi|296256371|gb|EFH03450.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
OB3b]
Length = 387
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
SL+ ++ P + + +RIFK E LE+W + D Y L K Y I
Sbjct: 157 ASLLPTSDSPGP---LQRREDGNFRLGAAAYVRIFKKEGELELWLKR-DGRYSLYKTYPI 212
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142
C WSG GPK+ +GD Q+PEGFY + L+P+S Y + NIGFPN +D+ + RTG LM
Sbjct: 213 CKWSGRLGPKLRSGDYQSPEGFYSVSARQLHPSSAYHRAFNIGFPNAYDRQNGRTGGALM 272
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY------ 196
+HG C S GC+AM +K ++EIY +V +LR Q + + FPFRMT + +
Sbjct: 273 VHGACKSVGCFAMTDKVIEEIYGVVEAALRAG-QHEVPVHIFPFRMTEEALAKETRGDWS 331
Query: 197 -------QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+ +FW LK G+D FE+ + P +Y F
Sbjct: 332 TFWAVPPEYQQWTAFWQNLKEGYDLFERTGEPPTAYACGARYGFAA 377
>gi|218780861|ref|YP_002432179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
AK-01]
gi|218762245|gb|ACL04711.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
AK-01]
Length = 239
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 124/223 (55%), Gaps = 3/223 (1%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
S + + ++ +L + + P +RIFK E LE+W
Sbjct: 18 TAFAQEVPSSARSKEVIARIAPDLKKEFSQAGLTWGAPVFMRIFKKEKRLEVWVLK-GKR 76
Query: 74 YVLLKEYKI-CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
+ K YKI GPK+E GD +APEGFY++ +NP+S+Y L+ NIG+PN++D+
Sbjct: 77 FQHFKSYKIFTYGLRGLGPKLEEGDWRAPEGFYFVPPKMMNPSSRYHLAFNIGYPNKYDR 136
Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192
H RTG +M+HG C S GCYAM +K+++EIY I +LR N Q ++ FPF MT KN
Sbjct: 137 RHGRTGGLIMVHGSCVSVGCYAMRDKRIEEIYTIADAALR-NGQPFFRVHIFPFEMTEKN 195
Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
M+ YQ++ + FW LK G+D FEKN P + + +YVF
Sbjct: 196 MKKYQDDDWFEFWRNLKQGYDLFEKNKTPPDADVKDGKYVFSP 238
>gi|197284252|ref|YP_002150124.1| hypothetical protein PMI0351 [Proteus mirabilis HI4320]
gi|194681739|emb|CAR40910.1| putative exported protein [Proteus mirabilis HI4320]
Length = 250
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 134/239 (56%), Gaps = 11/239 (4%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MT+ L+ L I L SL AE+ S +I KK T P I+IFK E
Sbjct: 1 MTSHAKQLIIFLTIILT------SLFVNAEN--SSKFLIKPVKKST--GEPIYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
N+LE++ D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++
Sbjct: 51 NLLELYIEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYR 110
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+IN+GFPN++D+ TG LMIHG C S GCYAM + M EIY +L+ N Q I
Sbjct: 111 AINLGFPNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALK-NGQQSIN 169
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
I FPF+MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+ + I
Sbjct: 170 IHIFPFKMTAENMKKFQYSANMDFWQQLAPAYQYVEEYKKIPSISVKNGRYLVNNREAI 228
>gi|227357845|ref|ZP_03842193.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC
29906]
gi|227161955|gb|EEI46973.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC
29906]
Length = 250
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 135/239 (56%), Gaps = 11/239 (4%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MT+ L+ L I L SL AE+ S +I KK T P I+IFK E
Sbjct: 1 MTSHAKQLIIFLTIILT------SLFVNAEN--SSKFLIKPVKKST--GEPIYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
N+LE++ D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++
Sbjct: 51 NLLELYIEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYR 110
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+IN+GFPN++D+ TG LMIHG C S GCYAM + M EIY +L+ N Q +I
Sbjct: 111 AINLGFPNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALK-NGQQNIN 169
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
I FPF+MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+ + I
Sbjct: 170 IHIFPFKMTAENMKKFQYSANMDFWQQLAPAYQYVEEYQKIPVISVKNGRYLVNNREAI 228
>gi|226328780|ref|ZP_03804298.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198]
gi|225201966|gb|EEG84320.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198]
Length = 256
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 134/239 (56%), Gaps = 12/239 (5%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
MT+ L+ L + L SL+ A++ LS M+ + S P I+IFK E
Sbjct: 1 MTSHAKQLISFLTLMLI------SLLVNADNSLS----FLMKPVKKSTGQPIYIQIFKEE 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
++LE++ +D + ++ Y IC++SG GPK GD ++PEGFY + + LNPNS+++
Sbjct: 51 SLLELYTEKLDGQLEKVRTYPICSYSGGLGPKKFQGDLKSPEGFYQVNFAQLNPNSRFYR 110
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+IN+GFPN++DK+ TG LMIHG C S GCYAM + M EIY +L+ QS I
Sbjct: 111 AINLGFPNQYDKSKGYTGDFLMIHGACKSVGCYAMTDPVMDEIYQYAELALQRG-QSTIN 169
Query: 181 IQAFPFRMTSKNMQLYQNNPNYS-FWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
I FPF+MT++NM+ +Q + + FW L + Y E + P I + + +Y
Sbjct: 170 IHIFPFKMTAENMKKHQYSKDMDFFWQQLMPAYQYVEAYKKIPSITVQDGRYFVNSTLA 228
>gi|300024685|ref|YP_003757296.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526506|gb|ADJ24975.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 318
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P L ++ K + P +IRIFK E+ LEIWK+ Y+L Y IC WSGT G
Sbjct: 42 TPNVAFLQARLRDKGVTLADPILIRIFKAESELEIWKQK-GGGYILFATYPICHWSGTLG 100
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150
PK+ GD QAPEG+Y + + ++ S+++GFPN D++ RTG+ +++HG C+S
Sbjct: 101 PKLRDGDRQAPEGYYTLSRSQTRHVGRWPRSLDLGFPNILDQSQARTGSSILVHGGCSSI 160
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210
GC+AM N EI+ + ++ G Q + + FPFRMT KN+ +P +FW LK
Sbjct: 161 GCFAMTNPVSDEIHQMTLAAMDGGEQ-IVPVHVFPFRMTDKNLAAQDASPWKAFWTNLKE 219
Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKGQ 237
G+D FE+ + P I + + +Y+F + Q
Sbjct: 220 GYDLFEQTKRPPIIGVCSGRYIFRETQ 246
>gi|312892268|ref|ZP_07751764.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
gi|311295243|gb|EFQ72416.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
Length = 234
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 93/234 (39%), Positives = 131/234 (55%), Gaps = 5/234 (2%)
Query: 3 NRYNILLFALFIFLNGCH---HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
+ ++L + F+ +N L + L + P IRIFK
Sbjct: 2 LKALLVLISFFLLINHPVTDLPDSKLAADVRAAVWPRLEKELNNGGFKAGSPIYIRIFKE 61
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ILEIW + D+ Y L K Y +C +SG FG K D ++PEGFYYI LNP S Y
Sbjct: 62 EHILEIWVKK-DSTYSLFKTYPVCYFSGGFGTKTRINDGKSPEGFYYITPWQLNPVSHYH 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
L+INIG+PN+ +K+ TG D+MIHG CAS GCYAM + ++EIY +V SL Q+ I
Sbjct: 121 LAINIGYPNQLEKSKGYTGTDIMIHGHCASIGCYAMTDPLIEEIYTVVYKSLAAG-QTAI 179
Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
+ FPF++ + NM+L + +SFWN +K G+D FE P + ++NKQY F
Sbjct: 180 PLHIFPFKLNATNMKLCAASDYFSFWNNMKAGYDLFESRRIPPVVSVVNKQYAF 233
>gi|323137985|ref|ZP_08073059.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
gi|322396704|gb|EFX99231.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
Length = 496
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 111/225 (49%), Gaps = 16/225 (7%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84
L + A P E+ K +RIFK E LE+W R + + L K + IC
Sbjct: 265 LPEPALRPAPEDAFQQPPPK-FGMGDQVFVRIFKQEGQLELWLRK-NGRFNLYKTFPICK 322
Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144
WSG GPKI+ D Q+PEGFY + LNP+S Y + N+G+PN FD+ + RTG +M+H
Sbjct: 323 WSGRLGPKIKEADYQSPEGFYSVSARQLNPHSNYHRAFNVGYPNAFDRQNGRTGGLVMVH 382
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY-------- 196
G C S GC+AM ++ ++EIY V +LR Q I + FPFRMT +
Sbjct: 383 GACKSVGCFAMTDRGIEEIYGFVEAALRAG-QKEIAVHIFPFRMTDAAIARETGGGWLAF 441
Query: 197 -----QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
SFW LK G+D FE+ + P Y F G
Sbjct: 442 VGGGGNYAQWTSFWKNLKQGYDLFERTGEPPVAFACGDHYEFDGG 486
>gi|320353230|ref|YP_004194569.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
2032]
gi|320121732|gb|ADW17278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
2032]
Length = 266
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 11/239 (4%)
Query: 6 NILLFALFIFLN------GCHHSRSLIDKAEHPLS---ENLIISMQKKRTSPFHPTVIRI 56
+L F+L + KAE ++ + +Q K + P +RI
Sbjct: 13 GLLFFSLLTLASPWPVPVATGTDLPTTPKAETAMAQTRPKIQQELQAKGFAVGQPIFVRI 72
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116
FK ILE+W + L K YK+C +SG GPKI GD QAPEGFY + LNPNS
Sbjct: 73 FKIPGILELWMNKGRG-FELFKAYKVCNYSGFPGPKISEGDWQAPEGFYSVSAEQLNPNS 131
Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
Y L+ +IG+PN FD A RTG +M+HG C S GC+AM +++++EIY + ++L Q
Sbjct: 132 GYHLAFDIGYPNAFDVAKRRTGNLIMVHGNCKSVGCFAMTDRRIEEIYLLAHEALAQG-Q 190
Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+ FPF +T +N++ + +P FW L+ G+ FE + Q P I + N +YV
Sbjct: 191 ERFDVHIFPFPLTQRNLKKFAASPWIKFWESLEPGYSAFEMSKQVPQIAVQNGEYVVTS 249
>gi|187735088|ref|YP_001877200.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC
BAA-835]
gi|187425140|gb|ACD04419.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC
BAA-835]
Length = 244
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 13 FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
+F C S A ++ L ++ P +R K +++LE+W +
Sbjct: 20 AVFNMACAEKSSNRADIARKRVTPVLNSFLEPCGARVGSPVFLRAVKEDSVLELWVKPDK 79
Query: 72 AE-YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+E Y+L K Y I AWSG GPK + GD Q PEGFY + + LNP S Y LS NIG+PN +
Sbjct: 80 SECYMLAKRYPIAAWSGKLGPKEKEGDRQTPEGFYEVEPSGLNPRSNYHLSFNIGYPNAY 139
Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
D++ NRTG+ +M+HG S GC AM + ++EIY +V +L + Q ++ +Q +PF T
Sbjct: 140 DRSLNRTGSFIMVHGRDVSIGCLAMTDSGIEEIYTMVEQALV-HGQKNVPVQIYPFVPTP 198
Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
+ +++P+ +FW + D+ E+ ++ +N + V +
Sbjct: 199 ARLSEEKDSPHAAFWADMARAWDWTERTRTPARVKAVNGRLVVVE 243
>gi|114800403|ref|YP_759185.1| hypothetical protein HNE_0455 [Hyphomonas neptunium ATCC 15444]
gi|114740577|gb|ABI78702.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 253
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 6/234 (2%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLS-----ENLIISMQKKRTSPFHPTVIRIFKNE 60
+L F L H+ ++ + A + E L ++ +K + P ++I K
Sbjct: 21 AMLAFLCLPALLAFAHADTVPETARSRAAYAAQAEPLKAALAEKGLALGSPVFLQITKEP 80
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L + ++ + ++ + + +CA SG GPKI GD QAPEGFY + +NP S + L
Sbjct: 81 AELTAYVQDTEGKFQPFRTWPVCAVSGDLGPKIREGDHQAPEGFYKVTAGQMNPASSFHL 140
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
S N+G+PN FD+A++RTG+ LM+HG CAS GC+AM ++ ++EI+ +++ + G Q +
Sbjct: 141 SFNLGYPNAFDRANDRTGSFLMVHGSCASVGCFAMTDEGIEEIWTLMQAAFEGG-QKAVD 199
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234
+ FPF MT + M + +P+ +FW LK + F + + P + + + Y
Sbjct: 200 VHIFPFPMTQQAMAGREASPHAAFWESLKPAWNKFSASGEVPTVSVRDGAYQVR 253
>gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 290
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 105/168 (62%), Gaps = 1/168 (0%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
++ + Y LLK Y I WS GPK + GD QAPEGFY I +NPNS Y+LS ++G
Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62
Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+PN D+A TG +M+HG C+SAGC+AM + M EIYA+ R++ Q Q Q++P
Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAF-NGGQRAFQFQSYP 121
Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
FRMT+ N+ ++N+PN FW LK G DYFE +EP + +YVF
Sbjct: 122 FRMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVF 169
>gi|171911100|ref|ZP_02926570.1| hypothetical protein VspiD_07990 [Verrucomicrobium spinosum DSM
4136]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKI 93
L ++++ + P IR+FK LE+W + A + K + I A SG GPK
Sbjct: 10 PGLTEELRRQGFALGDPIFIRVFKETLELELWIKAKSAPAFRKWKTWPIAAMSGELGPKT 69
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153
+ GD QAPEGFY + +LNP S Y LS NIG+PN FD+AH RTG+ +M+HG+ S GC+
Sbjct: 70 KEGDRQAPEGFYQVTTKSLNPRSSYHLSFNIGYPNAFDQAHQRTGSFIMVHGKAVSIGCF 129
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL--YQNNPNYSFWNMLKLG 211
AM + ++EIY + +L+ QS + FPFRMTS+ + ++ FW L+ G
Sbjct: 130 AMTDPVIEEIYLMAEAALKRG-QSSFGVHVFPFRMTSERLLQAGEEHPSLLKFWLDLRPG 188
Query: 212 HDYFEKNHQEPFIQIINKQYVFFKGQT 238
+ FE Q P I++ K+Y T
Sbjct: 189 YTAFESTQQPPIIKVEEKRYRVTPVGT 215
>gi|312114448|ref|YP_004012044.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219577|gb|ADP70945.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 352
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+ + F L F SR E L + K P IRI+K + LE+
Sbjct: 11 SAIAFCLASFQGASATSRDARGAVEKE--NALAAEFEGKGMKLGSPVFIRIYKQSSTLEL 68
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN-PNSKYFLSINI 124
W Y L K Y IC ++G GPK+ GD Q+PEG Y + W++L PN ++ ++NI
Sbjct: 69 WVEKGP-RYELFKTYGICKFAGGLGPKMYEGDRQSPEGLYRVEWDDLIGPNPRWHRAMNI 127
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
+PN FDK + R G+ ++IHG+C+S GC+A+ + ++E+Y VR +LRG QSH+ + A
Sbjct: 128 NYPNAFDKMNGRGGSSILIHGKCSSIGCFAIQDANVEEVYDAVRAALRGG-QSHVPVLAL 186
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
PFR +L FW+ L+ F+++ P + + +Y F
Sbjct: 187 PFRFAKYAPELDDTRKLNEFWSDLRRADLLFDRDRLPPMAYVCDNRYYF 235
>gi|284007778|emb|CBA73623.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 182
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
++K Y IC +SG GPK GD ++PEGFY I + L P+SKY+ + N+GFPNE+D+AH
Sbjct: 1 MVKSYPICNFSGGLGPKTRQGDLKSPEGFYRITRSQLKPDSKYYRAFNLGFPNEYDQAHG 60
Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
TG+ LM+HG C S GCYAM ++ + EIY V ++L N Q IQ+ +PF+MTS NM
Sbjct: 61 YTGSYLMVHGGCRSIGCYAMTDRYINEIYRYVENALH-NGQYEIQVNIYPFKMTSANMNR 119
Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237
++N+ Y+FW L+ ++YF K +Q P I I QY+ K
Sbjct: 120 HRNSRYYTFWQQLQPAYEYFTKTNQLPVINIQQGQYLVNKFP 161
>gi|254786219|ref|YP_003073648.1| hypothetical protein TERTU_2191 [Teredinibacter turnerae T7901]
gi|237686206|gb|ACR13470.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 171
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 109/172 (63%), Gaps = 2/172 (1%)
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+W + EY L K Y+IC +SG+ GPK GD QAPEGFY++ +LNP S Y LS N+
Sbjct: 1 MWVK-SGEEYELFKTYEICTFSGSLGPKTRKGDNQAPEGFYFVKPGSLNPWSSYHLSFNL 59
Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
G+PN +++ H TG+ LM+HG+C S G YAM ++ + EIYA+ + + Q ++ AF
Sbjct: 60 GYPNSYERLHGFTGSALMVHGKCVSIGSYAMTDRYINEIYAMAQGAFESG-QPFFRVHAF 118
Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236
PFR+ S+ ++ Y+NN YSFW LK G+D+F K+ P + +YVF G
Sbjct: 119 PFRLESEVLEKYKNNRWYSFWKNLKEGYDHFAKHKVPPNVDSEKGRYVFSAG 170
>gi|332664143|ref|YP_004446931.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM
1100]
gi|332332957|gb|AEE50058.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM
1100]
Length = 251
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 12/214 (5%)
Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
+ A + E L + +K P IR FK+E LE+W ++ ++ K Y IC
Sbjct: 37 VANARQLVGEKLAQELTQKGLKPGAAIFIRAFKSEQQLEVWVQD-SLQFRWFKTYHICKV 95
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---NRTGADLM 142
G GPK + GD Q PEG Y+I NP S Y LS+ I +PN D+ + G ++
Sbjct: 96 PGELGPKRKEGDLQVPEGLYWI--EVFNPQSSYHLSMGINYPNASDRILSDPKKPGGEIY 153
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ--LYQNNP 200
IHG C S GC + ++ ++E+Y + D+ + Q I + FP RMT +N L +N P
Sbjct: 154 IHGACGSVGCIPLTDEFIREVYLLALDA-KTAGQEKIPVHIFPCRMTEQNKVNLLARNQP 212
Query: 201 N-YSFWNMLKLGHDYFEKNHQEPFIQIIN--KQY 231
+ FW L +D+F + P ++ + +Y
Sbjct: 213 HLMPFWENLAEAYDFFVEKKVVPKYEVESNTGRY 246
>gi|255530608|ref|YP_003090980.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
gi|255343592|gb|ACU02918.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
Length = 244
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 9/205 (4%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKI 93
NL + + I +KNE LE+W + + Y L K Y CA SGT GPK+
Sbjct: 42 ANLQTELSAAGITRPFKLYIAAYKNEGKLELWLKTNGQKAYKLFKIYDFCAHSGTLGPKV 101
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---RTGADLMIHGECASA 150
+ GD Q PEGFYYI N NP S + LS+ + +PN+ D+ + R G D+ IHG C +
Sbjct: 102 KEGDLQTPEGFYYI--NVFNPKSSFHLSLGVNYPNKVDERRSGKERPGGDIYIHGNCVTV 159
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM--QLYQNNPNYSFWNML 208
GC + + +++E+Y + ++ + Q I + FPF+MTS N+ QL Q + W L
Sbjct: 160 GCIPLTDDKIKEVYVLAVEA-KNAGQDPIPVHIFPFKMTSVNLNIQLKQYPAQRALWTNL 218
Query: 209 KLGHDYFEKNHQEPFIQIINKQYVF 233
+ G+ YFEK++ P + +Y+F
Sbjct: 219 ETGYRYFEKHNNLPVVTEKEGKYLF 243
>gi|256424395|ref|YP_003125048.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
gi|256039303|gb|ACU62847.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
Length = 252
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 15/219 (6%)
Query: 26 IDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKIC 83
+ A E L QKK + P IR FK ++ LEIW +N A+ + L K Y++C
Sbjct: 36 VGTAYRDKEEQLREEFQKKGLAYPAKYIFIRSFKLDSELEIWVKNSVADTFRLFKSYRVC 95
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---NRTGAD 140
SG GPK + GD Q PEGFYYI N+ NPNS Y LS+ I +PN DK + G +
Sbjct: 96 TLSGKMGPKRKEGDRQVPEGFYYI--NDFNPNSSYHLSLGINYPNFADKILSDPKKPGGE 153
Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY---- 196
+ IHG C + GC + + ++E+Y + ++ + + Q I + FP + + Y
Sbjct: 154 IYIHGSCLTIGCIPLTDDIIEEVYVMAVNA-KNSGQDFIPVHVFPVKFGNIRSMEYLGNF 212
Query: 197 --QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN-KQYV 232
++N + FW LK +DYFE +H+ P + + +Y+
Sbjct: 213 TLKDNSSEKFWVDLKYAYDYFEAHHKLPVVLVDEKGKYI 251
>gi|196234486|ref|ZP_03133311.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428]
gi|196221467|gb|EDY16012.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428]
Length = 265
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
A+ + + + I A L +R K E +LE+W R+
Sbjct: 28 AVPAPASPDNDTTDRIAVARQQHEAALRQKYHAAAVGYPGEVFLRWLKREAMLELWARDP 87
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ L+ Y I A SGT GPK GD Q PEGFY I N NP S + LS+ + +PN
Sbjct: 88 GRRFRLVATYPILASSGTPGPKRREGDRQVPEGFYEI--NRFNPKSSFHLSLGLNYPNAS 145
Query: 131 DKA---HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187
D H++ G+D+ IHG S GC + + ++E+Y D+ + Q+ IQ+ FP R
Sbjct: 146 DLVLSDHDQPGSDIFIHGSNVSIGCAPLGDNAIEEVYLAALDA-QARGQARIQVHVFPSR 204
Query: 188 MTSKNMQLY-----QNNPNYS-FWNMLKLGHDYFEKNHQEPFIQII-NKQYVFFKGQT 238
M + + + P + FW L+ G ++FE++ P + + + +Y
Sbjct: 205 MNGSGWEQFATGEIRQRPELAVFWTQLRPGFEFFERHRTLPTVAVEKDGRYRVQGAAP 262
>gi|149279594|ref|ZP_01885723.1| putative inner membrane protein [Pedobacter sp. BAL39]
gi|149229630|gb|EDM35020.1| putative inner membrane protein [Pedobacter sp. BAL39]
Length = 247
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR-NVDAEYVLLKEYKICAWSGTFGPKI 93
+ + ++ + + +I +K E +LE+W + + Y L + Y CA SG GPK+
Sbjct: 43 KPMQKALLEAKIPAGSELLIMAYKKEGMLEVWMKPKGTSRYQLFRSYGFCARSGVLGPKV 102
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASA 150
+ GD Q PEGFY I NP S + LS+ + +PN D A + G ++ IHG C +
Sbjct: 103 QEGDYQTPEGFYEINA--FNPQSNFHLSLGVSYPNAVDLARSGTKKPGGEIYIHGNCVTV 160
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY--QNNPNYSFWNML 208
GC + +++++E+Y + ++ R Q I + FPFRM N + Q +FW +
Sbjct: 161 GCVPLTDEKIKEVYLLAIEA-RNAGQQRIPVYMFPFRMNEVNFEKNAKQFPQFRNFWASM 219
Query: 209 KLGHDYFEKNHQEPFIQIINKQYVFFK 235
K G+ YFE P I++ + QY K
Sbjct: 220 KTGYQYFESRKTLPQIRVKSGQYQISK 246
>gi|296125423|ref|YP_003632675.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM
12563]
gi|296017239|gb|ADG70476.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM
12563]
Length = 247
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 52 TVIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+I +K E+ILEI+ +N D Y + EYKI A SG GPK GD Q PEGFYYI
Sbjct: 61 ILITAYKQEDILEIYAKNKNDKTYKKIAEYKIAAKSGILGPKRMEGDLQVPEGFYYID-- 118
Query: 111 NLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
NP S Y+LS+ I +PNE D+ R G D+ IHG + GC M + +++EIY
Sbjct: 119 RFNPASSYYLSLGINYPNEADRKKSNAKRLGGDIFIHGANVTIGCMPMTDDKIKEIYLYA 178
Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ---NNPNYSFWNMLKLGHDYFEKNHQEPFI 224
+ + N Q+ I + FPF+MT N Y+ + FW +K G+D F+ +E I
Sbjct: 179 IYA-KDNGQNKIPVYIFPFKMTDDNFNYYKEIYESSLIDFWKNIKEGYDIFQNTKKEINI 237
Query: 225 QII-NKQYVF 233
+I N Y+F
Sbjct: 238 KIDNNGNYIF 247
>gi|124003370|ref|ZP_01688220.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina
ATCC 23134]
gi|123991468|gb|EAY30899.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina
ATCC 23134]
Length = 296
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKIETGD 97
+ Q+ + IR K E +E+W R + + L++ YK C SG GPK + GD
Sbjct: 92 LLKQQDIQTLDIELFIRAVKLEREVEVWARQKGTKPFKLVRTYKFCESSGELGPKRKDGD 151
Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT---GADLMIHGECASAGCYA 154
+Q PEGFY+I N NP SK+ LS+ + +PN DK T G D+ +HG+C + GC
Sbjct: 152 KQIPEGFYHI--NRFNPVSKFHLSLGLNYPNRSDKVLGDTTGLGGDIFLHGDCVTVGCIP 209
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM----QLYQNNPNY-SFWNMLK 209
+ + ++E+Y ++ + Q I + FP R+ + + Y+ N FW LK
Sbjct: 210 ITDNNIRELYVFAVEA-KARGQKKIPVNIFPARLDNAGFDKLKEQYKAQENLVEFWASLK 268
Query: 210 LGHDYFEKNHQEPF-IQIINKQYVF 233
G++YFE + P I + +Y+
Sbjct: 269 KGYEYFENTKELPTIIFAKSGKYIV 293
>gi|300870101|ref|YP_003784972.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000]
gi|300687800|gb|ADK30471.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000]
Length = 242
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 52 TVIRIFKNENILEIWKRN-VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+I +K E+ILEI+ +N D Y + +Y I + SG GPK GD Q PEGFYYI
Sbjct: 58 IIIIAYKEESILEIYAKNNADKTYKKIAQYNIASKSGVLGPKRMEGDLQVPEGFYYID-- 115
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR---TGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
NP S Y+LS+ I +PN+ D+ + G D+ IHG + GC M + +++EIY
Sbjct: 116 RFNPASSYYLSLGINYPNKSDQIKGKRNQLGGDIFIHGSEVTIGCIPMTDDKIKEIYLYA 175
Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQ-LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226
+ + N Q I + FPF+MT +N++ +++ +FW +K+G+D F + +E +I
Sbjct: 176 VHA-KNNGQKKIPVYIFPFKMTEENIKNRRESDKLINFWKNIKVGYDVFINSKREIIYKI 234
Query: 227 -INKQY 231
N Y
Sbjct: 235 DENGNY 240
>gi|213026129|ref|ZP_03340576.1| hypothetical protein Salmonelentericaenterica_28298 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 147
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168
N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V
Sbjct: 1 RNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVT 60
Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN 228
+L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++
Sbjct: 61 AALVFG-QPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVD 119
Query: 229 KQYVFFKGQT 238
+YV K +
Sbjct: 120 GRYVVSKPLS 129
>gi|225619280|ref|YP_002720506.1| hypothetical protein BHWA1_00333 [Brachyspira hyodysenteriae WA1]
gi|225214099|gb|ACN82833.1| conserved hypothetical protein [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 10/176 (5%)
Query: 52 TVIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+I ++K E+ILEI+ +N D+ Y + Y I A SG GPK GD Q PEGFYYI
Sbjct: 60 ILITVYKQEDILEIYAKNKSDSTYKKIASYNIAAKSGILGPKRMEGDLQVPEGFYYID-- 117
Query: 111 NLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
NP S Y+LS+ I +PNE DK +R G D+ IHG + GC M + +++EIY
Sbjct: 118 RFNPASSYYLSLGINYPNESDKKKSNASRLGGDIFIHGANVTIGCMPMTDDKIKEIYLYA 177
Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN---YSFWNMLKLGHDYFEKNHQ 220
+ + N Q+ I + FPF+MT +N Y+ N +FW+ +K G+D F+ + +
Sbjct: 178 VYA-KDNGQNKIPVYIFPFQMTDRNFDYYKKYYNESLINFWDNIKKGYDIFQNSKK 232
>gi|290476303|ref|YP_003469207.1| hypothetical protein XBJ1_3325 [Xenorhabdus bovienii SS-2004]
gi|289175640|emb|CBJ82443.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 180
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
+ L L +F C +E + P I+IFK E +
Sbjct: 2 KKTAFYLSLLLLFHMSCSALAQSTPSWLQSPNERRPLK------QPGAEIFIQIFKEEKV 55
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
LE++ ++ Y L + Y IC +SG GPK TGD ++PEGFY++ L PNS+Y+ +I
Sbjct: 56 LELYTKDNTDHYQLAQSYPICNYSGGLGPKTLTGDFKSPEGFYHVNLKQLKPNSRYYRAI 115
Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
N+GFPNEFDK +G +LMIHG C S GCYAM ++ + EIY ++ Q I+I
Sbjct: 116 NLGFPNEFDKFRGYSGNNLMIHGGCKSIGCYAMTDRYIDEIYRYAESAISYG-QDEIKIN 174
Query: 183 A 183
Sbjct: 175 I 175
>gi|294054888|ref|YP_003548546.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614221|gb|ADE54376.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis
DSM 45221]
Length = 235
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 1 MTNRYNILLFA--LFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQ-KKRTSPFH 50
M R+ ILL L + L C S + + + + + S +
Sbjct: 1 MRQRFCILLIGTILLVLLYLCGRSIWYPVYIKLRGGRTVSEVVHEIKSTQSFNDDFSQWK 60
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+ FK E +E+W ++++ +SG GPK+ GD Q PEG Y I +
Sbjct: 61 SLHLLCFKEERKIEVWVSGQSGT-KEIRQFDFTGYSGELGPKLRQGDGQIPEGIYEIEY- 118
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIY 164
LNPNS Y LS+ I +PNEFD+ R G D+ IHG+ A+ GC + + ++E++
Sbjct: 119 -LNPNSSYHLSMKISYPNEFDRLKGREDRREKLGYDIFIHGKSATVGCIPIGDDGIEELF 177
Query: 165 AIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGH-DYFEKNHQEP 222
+V + + +Q + I + R + +++ + + +++++ Y K+ EP
Sbjct: 178 LMVSEFGKDRVQ--VIISPYDMRQGRRALEITEISWENELYDIIEAASMKYAPKDSTEP 234
>gi|218678022|ref|ZP_03525919.1| hypothetical protein RetlC8_03792 [Rhizobium etli CIAT 894]
Length = 262
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/112 (49%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186
PN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QAFPF
Sbjct: 1 PNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKGG-QATVQLQAFPF 59
Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
RMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YVF + T
Sbjct: 60 RMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVFNQQAT 111
>gi|300723899|ref|YP_003713210.1| hypothetical protein XNC1_3038 [Xenorhabdus nematophila ATCC 19061]
gi|297630427|emb|CBJ91092.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 121
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/120 (49%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAM 155
GD ++PEGFY++ L PNS Y+ +IN+GFPNEFDK+ +G +LMIHGEC S GCYAM
Sbjct: 3 GDLKSPEGFYHVSLKQLKPNSHYYRAINLGFPNEFDKSKGYSGNNLMIHGECKSIGCYAM 62
Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF 215
N+ M EIY + + Q I+I +PFRMT +NM+ Y+NN N+ FW L+ ++Y+
Sbjct: 63 TNRYMDEIYQYAESAFY-HGQLAIKINIYPFRMTPQNMRRYKNNDNFLFWKQLQHAYEYY 121
>gi|213421922|ref|ZP_03354988.1| hypothetical protein Salmonentericaenterica_31013 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 119
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++
Sbjct: 1 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYK 59
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
+INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q
Sbjct: 60 AINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALVFG-QPSVQ 118
Query: 181 I 181
+
Sbjct: 119 V 119
>gi|302185720|ref|ZP_07262393.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae 642]
Length = 187
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLLALFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|289677908|ref|ZP_06498798.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae FF5]
gi|330969039|gb|EGH69105.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 187
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|330950757|gb|EGH51017.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae Cit 7]
Length = 187
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSVR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARSAGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
gi|63255226|gb|AAY36322.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
Length = 187
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY+I W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|330895915|gb|EGH28200.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330936942|gb|EGH41053.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. pisi str. 1704B]
gi|330975932|gb|EGH75998.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 187
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +M+HG + GC A+ N M+E
Sbjct: 113 MHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|298488264|ref|ZP_07006297.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298157203|gb|EFH98290.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 187
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ F + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLFAFFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSVR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +VRD
Sbjct: 173 IWDLVRDG 180
>gi|71736308|ref|YP_273601.1| hypothetical protein PSPPH_1343 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487172|ref|ZP_05641213.1| hypothetical protein PsyrptA_28111 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289625953|ref|ZP_06458907.1| hypothetical protein PsyrpaN_12636 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647895|ref|ZP_06479238.1| hypothetical protein Psyrpa2_09102 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71556861|gb|AAZ36072.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323189|gb|EFW79278.1| hypothetical protein PsgB076_19577 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329540|gb|EFW85529.1| hypothetical protein PsgRace4_12078 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330867514|gb|EGH02223.1| hypothetical protein PSYAE_09719 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330874811|gb|EGH08960.1| hypothetical protein Pgy4_06879 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330894520|gb|EGH27181.1| hypothetical protein PSYMO_39125 [Pseudomonas syringae pv. mori
str. 301020]
gi|330985037|gb|EGH83140.1| hypothetical protein PLA107_08431 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009210|gb|EGH89266.1| hypothetical protein PSYTB_05857 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 187
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ F + F+ L+ +++++ K +E + N +I+ + + P + + K+
Sbjct: 2 RWLFAFFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSVR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|237800073|ref|ZP_04588534.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806402|ref|ZP_04593106.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022928|gb|EGI02985.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027515|gb|EGI07570.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 187
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + F + F+ L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 2 RWLLAFFCMSFLPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ ++ LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISDGEALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC AM N M+E
Sbjct: 113 MHISYPNITDSARARNEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIAMKNNDMRE 172
Query: 163 IYAIVRDS 170
++ +V+D
Sbjct: 173 VWDLVKDG 180
>gi|330872830|gb|EGH06979.1| hypothetical protein PSYMP_01409 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330968074|gb|EGH68334.1| hypothetical protein PSYAC_26222 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 187
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 2 RWLLALFCMSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y++ G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|167032069|ref|YP_001667300.1| hypothetical protein PputGB1_1056 [Pseudomonas putida GB-1]
gi|166858557|gb|ABY96964.1| conserved hypothetical protein [Pseudomonas putida GB-1]
Length = 184
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P+ S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PVPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRK--QSDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRDS 170
+ +VRD
Sbjct: 171 WELVRDG 177
>gi|170723329|ref|YP_001751017.1| hypothetical protein PputW619_4168 [Pseudomonas putida W619]
gi|169761332|gb|ACA74648.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 184
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 31/187 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ LF L + ++ + ++I K + PL S + P V+ + K+E
Sbjct: 2 RWLFALFCLCVTSVSQAAFTETIIRKPQPPLPAQ---SQSQAAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ LS+
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWRK--QSDRFNLSM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N M+E+
Sbjct: 111 HITYPNISDAARATREGWSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNSDMREV 170
Query: 164 YAIVRDS 170
+ +V D
Sbjct: 171 WDLVPDG 177
>gi|213972051|ref|ZP_03400145.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301385883|ref|ZP_07234301.1| hypothetical protein PsyrptM_24748 [Pseudomonas syringae pv. tomato
Max13]
gi|302063774|ref|ZP_07255315.1| hypothetical protein PsyrptK_27639 [Pseudomonas syringae pv. tomato
K40]
gi|302132524|ref|ZP_07258514.1| hypothetical protein PsyrptN_14095 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923184|gb|EEB56785.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 187
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 2 RWLLALFCVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y++ G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|104783244|ref|YP_609742.1| hypothetical protein PSEEN4271 [Pseudomonas entomophila L48]
gi|95112231|emb|CAK16958.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 185
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 34/189 (17%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV--IRIFKNE 60
R+ + LF L + ++ + ++I K P S S+ +P P + + + K+E
Sbjct: 2 RWLLALFCLSVASVSQAAFTETIIRK---PASTQQPASLAM--VAPQGPQIDKVLVLKSE 56
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L++ R LK Y+I G K GD++ PEG Y++ W + + +Y L
Sbjct: 57 RRLQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKV--SDRYNL 109
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
+++I +PN D A R G+ +MIHG + GC AM N M+
Sbjct: 110 AMHISYPNITDAAKARRDGVAAGSMIMIHGTPINEEYPEWYFHTLDWTEGCIAMRNDDMR 169
Query: 162 EIYAIVRDS 170
E++++V+D
Sbjct: 170 EVWSMVKDG 178
>gi|330447689|ref|ZP_08311337.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491880|dbj|GAA05834.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 233
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSP---------------- 48
+ L L + +++ A +P + + + KR SP
Sbjct: 2 FKKALLPLLVMFTAVTDAQAASSYATYPPAGSRTVDDVMKRYSPFVEPRIKRYFESVGLT 61
Query: 49 FHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
+ P I +F K E LE+W ++ +K Y I SG GPK+ GD+Q PEG Y
Sbjct: 62 YPPKNIALFAMKEEMSLELWAEEK-GKWSYVKRYDIEKISGKKGPKLREGDKQVPEGIYR 120
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQM 160
+ LNPNS++ LS+ + +PN FD+ + R G+++ IHG+ AS GC AM + +
Sbjct: 121 VS--LLNPNSRFHLSMKLDYPNAFDRKYARLEGRTSPGSNIFIHGKQASTGCLAMGDYSI 178
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208
+E++ + + N I++ P + N P FW +
Sbjct: 179 EELFLLAERTGLDN----IEVVISPRDPKKGKLTAALNQP---FWTQI 219
>gi|330959130|gb|EGH59390.1| hypothetical protein PMA4326_11282 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 187
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF L + L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 2 RWLLALFCLSCVPLSQAAFTQTIVPKGSEQKIINNRVINTESIASKKIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQLISGS-----EALKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNITDAARARSEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
++ +V+D
Sbjct: 173 VWDLVKDG 180
>gi|148549476|ref|YP_001269578.1| hypothetical protein Pput_4270 [Pseudomonas putida F1]
gi|148513534|gb|ABQ80394.1| conserved hypothetical protein [Pseudomonas putida F1]
Length = 184
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PAPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRK--QSDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATRAGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRDS 170
+ +VRD
Sbjct: 171 WDLVRDG 177
>gi|26988184|ref|NP_743609.1| hypothetical protein PP_1451 [Pseudomonas putida KT2440]
gi|24982920|gb|AAN67073.1|AE016336_5 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313500324|gb|ADR61690.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 184
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF L + ++ + ++I K P S ++ P V+ + K+E
Sbjct: 2 RWLLALFCLCVTSVSQAAFTETIIRK---PAPAAQTPSPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRK--QSDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRDS 170
+ +VRD
Sbjct: 171 WDLVRDG 177
>gi|86139674|ref|ZP_01058241.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193]
gi|85823565|gb|EAQ43773.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193]
Length = 170
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 79/197 (40%), Gaps = 51/197 (25%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R +LL L FL+GC D E T +R++K + +L
Sbjct: 8 RRAVLLGGLAAFLSGCAGKFRSYDGPEV--------------------TRLRLYKGQRLL 47
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ D +L+ Y I G K GD + PEG Y + NP S Y LS+
Sbjct: 48 VL-----DGSDRVLQTYPIGLGFAPQGHKQFEGDGRTPEGTYIVD--KRNPESTYHLSVG 100
Query: 124 IGFPNEFDKAHN-----RTGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIV 167
I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V
Sbjct: 101 ISYPNEADIAFAAAQGLSPGGDIFIHGGPRPGIDPTDIRDWTAGCIAVTDRQIEDIYAMV 160
Query: 168 RDSLRGNMQSHIQIQAF 184
+D I F
Sbjct: 161 KDGT--------PIHIF 169
>gi|163737962|ref|ZP_02145378.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis
BS107]
gi|161388578|gb|EDQ12931.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis
BS107]
Length = 172
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 43/189 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L A + L GC S P +++++ ++ H
Sbjct: 1 MDRRTFGLGAAATLGLAGCSSGPSKFRSYNGPEVTSVVVNKGARKVYLLH---------- 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L+EY + G K GD + PEG Y I NPNS+Y L
Sbjct: 51 ------------HEDVLREYDMELGFAPLGHKQIEGDGKTPEGTYLIDRR--NPNSRYHL 96
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
SI I +PN D+A + G ++ IHGE +AGC A+ N +++
Sbjct: 97 SIGISYPNGQDRAKASAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIE 156
Query: 162 EIYAIVRDS 170
EIYA+VRD
Sbjct: 157 EIYAMVRDG 165
>gi|163742642|ref|ZP_02150028.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
gi|161384227|gb|EDQ08610.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
Length = 172
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 43/189 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L A + L GC S P +++++ ++ H
Sbjct: 1 MDRRTFGLGAAATLGLAGCSSGPSKFRSYNGPEVTSVVVNKGARKVYLLH---------- 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L+EY + G K GD + PEG Y I NPNS+Y L
Sbjct: 51 ------------HEDVLREYDMELGFAPLGHKQIEGDGKTPEGTYLIDRR--NPNSRYHL 96
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
SI I +PN D+A + G ++ IHGE +AGC A+ N +++
Sbjct: 97 SIGISYPNGQDRAKAAAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIE 156
Query: 162 EIYAIVRDS 170
EIYA+VRD
Sbjct: 157 EIYAMVRDG 165
>gi|159046034|ref|YP_001534828.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
gi|157913794|gb|ABV95227.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
Length = 166
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 68/161 (42%), Gaps = 32/161 (19%)
Query: 42 QKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99
K P V RI FK E + + E +L+ + I G K GD +
Sbjct: 21 SSKFLDYEGPEVTRIVVFKGERRMYLM-----NEDRVLRGFDIDLGFAPEGHKQVEGDGK 75
Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------- 147
PEG Y I NPNS + LS+ I +PN D A R G ++ IHG+
Sbjct: 76 TPEGRYRIDRR--NPNSSFHLSLGISYPNTADVARARAMGQSPGGNIFIHGQPNLLGPQT 133
Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+AGC A+ N +M+EIYA+V D I +P
Sbjct: 134 EENWTAGCIAVTNAEMEEIYAMVEDGTV--------IDIYP 166
>gi|325273813|ref|ZP_08140000.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51]
gi|324101053|gb|EGB98712.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51]
Length = 184
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + +F L + ++ + ++I K S ++ P V+ + K+E
Sbjct: 2 RWLLAIFCLCVTSVSQAAFTETIIRKPVQAAPSP---SPSQQAMQPLIDKVL-VIKSERR 57
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++
Sbjct: 58 LQLISRGEP-----LKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWRK--QSDRFNLAM 110
Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A G+ +MIHG + GC AM N+ MQE+
Sbjct: 111 HINYPNSNDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170
Query: 164 YAIVRDS 170
+ +VRD
Sbjct: 171 WNLVRDG 177
>gi|167947682|ref|ZP_02534756.1| hypothetical protein Epers_14537 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 249
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 37/237 (15%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQ--------------KKRTSPF 49
R+ ++L F + G +L A PLS ++ ++ ++ +
Sbjct: 2 RFAVILLC-FTLIAG-----TLPVAANEPLSPEVVQVLERLVPRLEPQLRRRFEQAGVEY 55
Query: 50 HPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P +++ K E +E+W + + + +Y++ A SG GPK+ GD Q PEGFY I
Sbjct: 56 PPARLQLISLKQEQQIEVWAADA-GPWRHIHDYQVLAASGVAGPKLREGDRQVPEGFYQI 114
Query: 108 GWNNLNPNSKYFLSINIGFPNEFD------KAHNRTGADLMIHGECASAGCYAMNNKQMQ 161
LNP+S++ LSI + FPN FD + + G+++ IHG S GC A+ ++ ++
Sbjct: 115 EA--LNPHSRFHLSIKLNFPNSFDWLNAHAEGRRQPGSNIFIHGSAWSVGCLAIGDQAVE 172
Query: 162 EIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL-YQNNPN-YSFWNMLKLGHDYFE 216
E++ +V S Q + P+ + QL P ++ L+ G F
Sbjct: 173 ELFLLVARS----WQEPASVMILPYDFRCQAPQLPAAARPWVAELYSYLQQGVARFP 225
>gi|83955789|ref|ZP_00964331.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83839794|gb|EAP78971.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
Length = 160
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 43/180 (23%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+LL L FL+GC S P L RI+K + +L +
Sbjct: 1 MLLGGLATFLSGCA---SKFRSYNGPEVTRL-----------------RIYKAQRLLVL- 39
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
D +L+ Y I G K GD + PEG Y I NP+S + LSI I F
Sbjct: 40 ----DGTDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYLIDRR--NPDSLFHLSIGISF 93
Query: 127 PNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170
PNE D A + G D+ IHG +AGC ++ ++Q+++IYA+VRD
Sbjct: 94 PNEADIAFAKAQGKSPGGDIFIHGGPRKGIDPMNKRDWTAGCISVTDRQIEDIYAMVRDG 153
>gi|331019743|gb|EGH99799.1| hypothetical protein PLA106_27216 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 187
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 2 RWLLALFYVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSAR 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y++ G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 60 QLQL-----ISGGEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 112
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 113 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 172
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 173 IWDLVKDG 180
>gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO_1461 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851907|gb|AAO54982.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 208
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+
Sbjct: 23 RWLLALFYVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSAR 80
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L++ + LK Y++ G K++ GD++ PEGFY++ W P++ Y LS
Sbjct: 81 QLQL-----ISGGEALKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWRK--PSNNYNLS 133
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162
++I +PN D A R G+ +MIHG + GC A+ N M+E
Sbjct: 134 MHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMRE 193
Query: 163 IYAIVRDS 170
I+ +V+D
Sbjct: 194 IWDLVKDG 201
>gi|163735640|ref|ZP_02143071.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149]
gi|161391068|gb|EDQ15406.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149]
Length = 170
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 51/197 (25%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R +LL L FL+GC E T +R++K + +L
Sbjct: 8 RRAVLLGGLAAFLSGCASKFRSYGGPEV--------------------TRVRLYKGQRLL 47
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ D +L+ Y + G K GD + PEG Y + NP S Y LS+
Sbjct: 48 VL-----DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGTYIVD--KRNPESTYHLSVG 100
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIV 167
I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V
Sbjct: 101 ISYPNEVDIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAVTDRQIEDIYAMV 160
Query: 168 RDSLRGNMQSHIQIQAF 184
+D I F
Sbjct: 161 KDGT--------PIHIF 169
>gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099]
gi|14026991|dbj|BAB53587.1| mlr7497 [Mesorhizobium loti MAFF303099]
Length = 163
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +L+ Y I S K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NPNS SI+I +PN D A + G +MIHG+ + GC
Sbjct: 80 NPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A+V D
Sbjct: 140 AVTDSDMDEIWAMVADG 156
>gi|319784695|ref|YP_004144171.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170583|gb|ADV14121.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 163
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +L+ Y I G K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVLRNYGIALGGDPVGHKHQEGDQRTPEGNYVLDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NPNS SI+I +PN D+A + G +MIHG+ + GC
Sbjct: 80 NPNSIAHKSIHISYPNADDEAAAKARNVGAGGMIMIHGQPNGYGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A+V D
Sbjct: 140 AVTDSDMDEIWALVADG 156
>gi|90578351|ref|ZP_01234162.1| hypothetical protein VAS14_14909 [Vibrio angustum S14]
gi|90441437|gb|EAS66617.1| hypothetical protein VAS14_14909 [Vibrio angustum S14]
Length = 233
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSP---------------- 48
+ L L + ++ + +P + + KR SP
Sbjct: 2 FKKALLPLLVMFTAVTDVQAAYSYSTYPPAGTRTVDDVMKRYSPFVEPRIKRYFEQAGLS 61
Query: 49 FHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
+ P I +F K E ++E+W ++ +K Y I SG GPK+ GD+Q PEG Y
Sbjct: 62 YPPKNIALFAMKEEMLVELWAEEK-GKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIYR 120
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQM 160
+ LNPNS++ LS+ + +PN FD+ + + G+++ IHG+ AS GC AM + +
Sbjct: 121 VS--LLNPNSRFHLSMKLDYPNAFDRKYAKLEGRTSPGSNIFIHGKQASTGCLAMGDYSI 178
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208
+E++ + + + N I++ P + + N FW +
Sbjct: 179 EELFLLAQRTGLDN----IEVVISPHDPKKGKLL---ASVNQPFWTQI 219
>gi|89074657|ref|ZP_01161122.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34]
gi|89049595|gb|EAR55155.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34]
Length = 233
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSP---------------- 48
+ L L + ++ + +P + + K SP
Sbjct: 2 FKKALLPLLVMFTAVTDVQAAYSYSTYPPAGTRTVDDVMKHYSPFVEPRMKRYFEHAGLS 61
Query: 49 FHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
+ P I +F K E +E+W ++ +K Y I SG GPK+ GD+Q PEG Y
Sbjct: 62 YPPQNIALFAMKEEMSVELWAEEK-GKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIYR 120
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQM 160
I LNPNS++ LS+ + +PN FD+ + + G+++ IHG+ AS GC AM + +
Sbjct: 121 IS--LLNPNSRFHLSMKLDYPNAFDRKYAKLEGRTFPGSNIFIHGKQASTGCLAMGDYSI 178
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208
+E++ + + + N I++ P + + N FW +
Sbjct: 179 EELFLLAQRTGLDN----IEVVISPHDPKKGKLL---ASVNQPFWTQI 219
>gi|89052763|ref|YP_508214.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1]
gi|88862312|gb|ABD53189.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1]
Length = 160
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 49/195 (25%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ ++ + L GC S + P ++ ++K E ++
Sbjct: 2 RFLLIAVLTLVALTGC----SRFIDYDGPQVTRVL-----------------VYKGERMM 40
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ N +L+ Y+I G K+E GD + PEG Y I NPNS+++LSI
Sbjct: 41 YLMHNN-----DVLESYEIELGFAPEGHKLEEGDGRTPEGEYMIDRR--NPNSQWYLSIG 93
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
I +PNE D A R G D+ IHG + GC A+ N +M++IYA+V +
Sbjct: 94 ISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENG 153
Query: 171 LRGNMQSHIQIQAFP 185
I +P
Sbjct: 154 T--------PISIYP 160
>gi|83646750|ref|YP_435185.1| hypothetical protein HCH_04045 [Hahella chejuensis KCTC 2396]
gi|83634793|gb|ABC30760.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 248
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
P+ E + + + P I + FK E LE+W D VL+ Y I A SG
Sbjct: 52 GPVVEPGLQDAFARAGVTYPPQRITLLAFKEEKRLELWAE-QDGVQVLVSAYPIQAASGV 110
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLM 142
GPK+ GD Q PEGFY I NPNS + LS+ + +P+ FD H + G D+
Sbjct: 111 AGPKLREGDRQVPEGFYRI--EGFNPNSSFHLSMKLNYPSPFDLKHAQAEGRTSPGGDIF 168
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202
IHG+ +S GC AM + +++++ + N I + P + + +
Sbjct: 169 IHGKASSVGCLAMGDPAVEDLFILANRVGVTN----IDVIIAPHDFRMRAPEATPQS--A 222
Query: 203 SFWNMLKLGHDYFEKNHQEPFIQ 225
W L + E++ + +
Sbjct: 223 PAW--LPELYQDIEQSLRPFAVS 243
>gi|85706916|ref|ZP_01038006.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
gi|85668527|gb|EAQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
Length = 166
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 39/184 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + ++ A L+ C + S P +I++ K E
Sbjct: 1 MKLKRRFVVMAGLCALSAC-GTNSKFRSYRGPEVTRVIVN-----------------KGE 42
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + N LLK YK+ G K GD + PEG Y I NPNS + L
Sbjct: 43 REMYLLHHN-----KLLKRYKVDLGFAPAGHKQFEGDGRTPEGEYVIDRR--NPNSSFHL 95
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
S+ I +PNE D A+ G D+ IHGE +AGC ++ N++M+++YA+
Sbjct: 96 SLGISYPNEADIAYAEAMGETPGGDIFIHGEPNALAVLSRDWTAGCISVKNREMEDVYAM 155
Query: 167 VRDS 170
VRD
Sbjct: 156 VRDG 159
>gi|260429237|ref|ZP_05783214.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
gi|260419860|gb|EEX13113.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
Length = 173
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 50/200 (25%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M IL+ AL L C S P +++ K+
Sbjct: 1 MRFFRLILIIALLGGLGAC---SSKFRTYNGPEVTQVVVK-----------------KST 40
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + + +L+ Y I G K GD + PEG Y+I NPNS + L
Sbjct: 41 RRMYLLHND-----KVLESYDIGLGFQPQGHKQYEGDGKTPEGLYFIDRR--NPNSNFHL 93
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC------------------ASAGCYAMNN 157
SI I +PN +D+A G D+ IHG + GC A+++
Sbjct: 94 SIGISYPNPYDRAFAASSGKSPGGDIFIHGGPPKDKKRRGGGSWRSNGRDWTWGCIAVSD 153
Query: 158 KQMQEIYAIVRDSLRGNMQS 177
++M++IYA+VRD +Q
Sbjct: 154 REMEDIYAMVRDGTPITIQP 173
>gi|89067448|ref|ZP_01154961.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516]
gi|89047017|gb|EAR53071.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516]
Length = 164
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 47/198 (23%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M +LL L C S+ P + ++++K +
Sbjct: 1 MNAIRLVLLMVGLTLLASCAPSK--FRTYNGPPVTS-----------------VQVWKTD 41
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
++ + + +LK Y G K GD + PEG YYI NPNS Y L
Sbjct: 42 RVMALM-----SGTRVLKTYDFEMGFAPQGHKYFEGDGRTPEGVYYIDRR--NPNSDYHL 94
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167
SI I +P+E D A G D+ IHG +AGC A++N ++EIYA+V
Sbjct: 95 SIGISYPDEEDIARALEAGLEPGGDIFIHGTPKLFADRTDWTAGCIAVSNDAVEEIYAMV 154
Query: 168 RDSLRGNMQSHIQIQAFP 185
+D I +P
Sbjct: 155 QDGT--------PIVIYP 164
>gi|149204465|ref|ZP_01881431.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
gi|149141964|gb|EDM30013.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
Length = 158
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 43/176 (24%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
FL+GC S P L R++K + +L +
Sbjct: 3 GFAAFLSGCA---SKFRSYNGPEVTRL-----------------RMYKGQRLLVL----- 37
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
D +L+ Y I G K GD + PEG Y I NP+S + LSI I +PNE
Sbjct: 38 DGADDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYEIDRR--NPDSLFHLSIGISYPNEA 95
Query: 131 DKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170
D A G D+ +HG +AGC A+ ++Q++EIYA+VRD
Sbjct: 96 DIAFAEAQGKSPGGDIFVHGGPRKGIDPMNVRDWTAGCIAVTDRQIEEIYAMVRDG 151
>gi|83942056|ref|ZP_00954518.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
gi|83953105|ref|ZP_00961827.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83842073|gb|EAP81241.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
gi|83847876|gb|EAP85751.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
Length = 165
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 40/183 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R IL + L C S S + P T + + K +
Sbjct: 1 MKRRNLILGGTALVALGAC--SSSKFKRYNGPQV-----------------TYVIVNKGD 41
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + + +L+ Y I G K+ GD + PEG Y I NPNS++ L
Sbjct: 42 RRMYLMHHD-----KVLESYDIKLGFAPVGHKVYEGDGRTPEGIYMIDRR--NPNSRFHL 94
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGE---------CASAGCYAMNNKQMQEIYAI 166
SI I +PNE D+A G D+ IHG+ + GC +++N +M+EIYA+
Sbjct: 95 SIGINYPNEMDRARAEALGKSPGGDIFIHGQKTAKDKNRTDWTWGCISVSNDEMEEIYAM 154
Query: 167 VRD 169
V D
Sbjct: 155 VGD 157
>gi|149377346|ref|ZP_01895091.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893]
gi|149358358|gb|EDM46835.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893]
Length = 187
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
+ SL +PLS + + T ++R K E L + + +++
Sbjct: 20 AFAFSLSLAPLYPLSASELPMGAMDETPEVSEVLVR--KEERRLYLLSGD-----QVVRS 72
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR--- 136
Y+I G K+ GD++ PEG Y + W N NS ++ SI+I +PN D+
Sbjct: 73 YRIGLGDNPSGHKLYEGDKRTPEGKYVLDWR--NSNSDFYKSIHISYPNAEDREQASAWG 130
Query: 137 --TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170
G +MIHG + GC A++N++M EI+ +V D
Sbjct: 131 LDPGGSIMIHGLPNEAGDMAFAFLGLDWTDGCIAVSNEEMDEIWQLVADG 180
>gi|85707004|ref|ZP_01038093.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
gi|85668445|gb|EAQ23317.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
Length = 158
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 43/176 (24%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
L FL+GC S P L R++K + L +
Sbjct: 3 GLAAFLSGCA---SKFRSYNGPEVTRL-----------------RMYKAQRFLVL----- 37
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
D +L+ Y I G K GD + PEG Y I NP S + LSI I +PN
Sbjct: 38 DGVDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYVIDRR--NPESLFHLSIGISYPNAA 95
Query: 131 DKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170
D A + G D+ IHG +AGC A+ ++Q++EIYA+VRD
Sbjct: 96 DIAFAQAQGKSPGGDIFIHGGPRKGIDPMNVRDWTAGCIAVTDRQIEEIYAMVRDG 151
>gi|260460299|ref|ZP_05808551.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
gi|259033944|gb|EEW35203.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
Length = 163
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++R+ K E LE+ + +++ Y I G K + GD++ PEG Y + W
Sbjct: 27 LVRVHKAERRLEL-----IGDGKVVRSYGIALGGAPVGHKHQEGDQRTPEGRYILDWR-- 79
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NPNS + SI++ +PN D A + G +MIHG+ + GC
Sbjct: 80 NPNSIAYKSIHVSYPNADDLAAAKRRNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ + M EI+A V D
Sbjct: 140 AVTDSDMDEIWAKVADG 156
>gi|84500743|ref|ZP_00998992.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
gi|84391696|gb|EAQ04028.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
Length = 165
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 42/185 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M IL+ A+ + L+GC S P ++ ++K +
Sbjct: 1 MRFLSLILMIAIGLGLSGCA---SKFKTYYGPEVTQVL-----------------VYKAD 40
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + + +LK Y+I G K GD + PEG Y I NP+S++ L
Sbjct: 41 RRMYLMHHD-----EVLKSYRIGLGFAPVGHKQFEGDGRTPEGTYRIDRR--NPDSEFHL 93
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC----------ASAGCYAMNNKQMQEIYA 165
S+ + +PN D A G D+ IHG +AGC A+ N ++++IYA
Sbjct: 94 SVGLSYPNTRDVAFATSQGKSPGGDIFIHGLPNRFKKSGSRDWTAGCIAVRNHEIEDIYA 153
Query: 166 IVRDS 170
+V+D
Sbjct: 154 MVKDG 158
>gi|84514894|ref|ZP_01002257.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53]
gi|84511053|gb|EAQ07507.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53]
Length = 160
Score = 164 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I++FK + +++ + LL++Y + K + GD + PEG Y I N
Sbjct: 29 TRIQVFKEQRKMQLLHND-----KLLRQYDVALGFNPRDHKQQEGDGRTPEGAYVI--NR 81
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNK 158
NPNS++ LSI I +PN D A R G D+ IHG + GC A++N
Sbjct: 82 QNPNSRFHLSIGISYPNAVDVARARAMGVHPGGDIFIHGTPAPWIGMPDWTWGCIAVSNT 141
Query: 159 QMQEIYAIVRDSLR 172
+M E+Y++V+ +
Sbjct: 142 EMDEVYSMVQLGTK 155
>gi|259417350|ref|ZP_05741269.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
gi|259346256|gb|EEW58070.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
Length = 203
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 44/189 (23%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R + GC ++ P++ I I K
Sbjct: 33 MHRRTFGAGILATLGAAGCSSGPNIRRYNGPPVTS------------------IVINKGS 74
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + E +LKEY++ G K GD + PEG Y I NP S+++L
Sbjct: 75 RRMYLL-----NETKVLKEYEVGLGFAPVGHKQIEGDGRTPEGTYRIDRR--NPRSQFYL 127
Query: 121 SINIGFPNEFDKAH-----NRTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
S+ I +PN D+A+ G D+ IHGE +AGC A++N++++
Sbjct: 128 SLGISYPNAADRAYASSLGASPGGDIFIHGEPNDRADRRRAARTQDWTAGCIAVSNEEIE 187
Query: 162 EIYAIVRDS 170
EI+++V D
Sbjct: 188 EIWSMVNDG 196
>gi|146278672|ref|YP_001168831.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556913|gb|ABP71526.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
17025]
Length = 164
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 77/195 (39%), Gaps = 48/195 (24%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I L L + L C S+ I K E P + +++ K E +
Sbjct: 4 LKITLIILALGLTACGDSK--IRKYEGPPVTS-----------------VQVHKAERKMY 44
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ +L++Y I G K GD + PEG Y+I NP S Y LS+ I
Sbjct: 45 LLSGA-----KVLRQYDIGLGFKPTGHKQYEGDGRTPEGVYFID--RQNPRSSYHLSLGI 97
Query: 125 GFPNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYAIVRDS 170
+PN D+ + G D+ IHG +AGC A+ +++++EIYA+VR
Sbjct: 98 SYPNTADQKMAFLEGKKPGGDIFIHGRGKYNGPNKRDWTAGCIAVTDQEVEEIYAMVRVG 157
Query: 171 LRGNMQSHIQIQAFP 185
I P
Sbjct: 158 T--------PIYILP 164
>gi|254487420|ref|ZP_05100625.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
gi|214044289|gb|EEB84927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
Length = 166
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R IL + L+ C KR S T + + K +
Sbjct: 1 MKRRNFILGGTALVALSACSGDSKF------------------KRYSGPQVTYVVVNKGD 42
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + ++ +L+ Y I G K GD + PEG Y+I NPNSK+ L
Sbjct: 43 RRMYLMHQD-----KVLEAYDIRLGFAPVGHKAHEGDGRTPEGRYWIDRR--NPNSKFHL 95
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGE---------CASAGCYAMNNKQMQEIYAI 166
S+ I +PN+ D+A+ + G D+ IHG+ + GC +++N+++++IYA+
Sbjct: 96 SLGISYPNDNDRANAAALGKQPGGDIFIHGQKAADKKNINDWTWGCISVSNQEIEDIYAM 155
Query: 167 VRDS 170
V
Sbjct: 156 VGTG 159
>gi|126738470|ref|ZP_01754175.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
gi|126720269|gb|EBA16975.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
Length = 174
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 45/191 (23%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
M R L A + L GC + S P +++++ ++ +
Sbjct: 1 MDRRVFGLSVAASLTLAGCGSTNYASRFKTYNGPEVTSVVVNKGARKIYLLN-------- 52
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
E+IL +EYK+ G K GD + PEG Y I NPNS Y
Sbjct: 53 GESIL--------------REYKMDLGFAPLGHKQIEGDGKTPEGLYRIDRR--NPNSSY 96
Query: 119 FLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQ 159
LSI I +PN D A+ R G ++ IHGE +AGC A+ N +
Sbjct: 97 HLSIGISYPNASDVAYARSIGKRPGGEIFIHGEPNERKARKRASRVSDWTAGCIAVKNSE 156
Query: 160 MQEIYAIVRDS 170
++EIYA+VRD
Sbjct: 157 IEEIYAMVRDG 167
>gi|86136792|ref|ZP_01055370.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
gi|85826116|gb|EAQ46313.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
Length = 174
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P V + N+ +++ + + +L+EYK+ G K GD + PEG Y I
Sbjct: 32 GGPEVTSVVVNKGARKVYLLHGE---DILREYKMDLGFAPLGHKRVEGDGKTPEGLYRID 88
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------AS 149
NPNS + LSI I +PN D+AH R G ++ IHGE +
Sbjct: 89 RR--NPNSAFHLSIGISYPNAEDRAHARALGKRPGGEIFIHGEPNNEKDRKRAARVSDWT 146
Query: 150 AGCYAMNNKQMQEIYAIVRDS 170
AGC A+ N +++EIYA+VRD
Sbjct: 147 AGCIAVKNDEIEEIYAMVRDG 167
>gi|269104655|ref|ZP_06157351.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161295|gb|EEZ39792.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 239
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 18/189 (9%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAW 85
K P+ E + + + P I +F KNE +E+W D + L+K Y I
Sbjct: 43 KRYQPIVEPRLKIDFARAEVSYPPKKIALFAMKNEQKMELWAEEGD-TWHLIKNYPITKL 101
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN------RTGA 139
SG GPK GD+Q PEG Y + + LNPNS+Y LS+ + +PN+FD + + G
Sbjct: 102 SGVMGPKKREGDKQIPEGIYQVEF--LNPNSQYHLSMKLNYPNDFDLKYAKLEGRTKPGT 159
Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199
++ IHG+ +S GC A+ + ++E++ + +++ N I + P+ ++ + +
Sbjct: 160 NIFIHGKESSVGCLAIGDVAIEELFVLAKNTGIDN----IDVVISPYDPRTRTLVPTLSE 215
Query: 200 PNYSFWNML 208
P W +
Sbjct: 216 PY---WTSI 221
>gi|262371690|ref|ZP_06064969.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
gi|262311715|gb|EEY92800.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
Length = 179
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 30/163 (18%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ L ++ T I +FK + W+ + +++ Y I G
Sbjct: 17 APIHPALSAQEIEEINKTKPVTTIEVFKQQ-----WQLKLKHHDQIIRSYPIRLGFNPMG 71
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG 145
K GD + PEG Y I W NP S Y+ S++I +PN D + + G D+MIHG
Sbjct: 72 HKQFEGDGKTPEGTYTIDWR--NPQSAYYKSLHISYPNPNDLTYAKQRQKSAGGDVMIHG 129
Query: 146 E------------------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N M EI+ +V++
Sbjct: 130 TVPTPATALPASSTYMPRKDWTLGCIAVTNADMDEIWQLVKNG 172
>gi|90411123|ref|ZP_01219136.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK]
gi|90327969|gb|EAS44290.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK]
Length = 238
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAW 85
K P+ E I M ++ + P + +F K E +E+W ++ +A +V +K Y I
Sbjct: 46 KRYSPILEPRISLMFEQVGVQYPPEQVALFALKEEMQVELWAKDGEA-WVYIKRYDIAKI 104
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN------RTGA 139
SG GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD + R GA
Sbjct: 105 SGKSGPKLREGDHQVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGA 162
Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
++ IHG+ S GC AM + ++E++ +V + N+Q I
Sbjct: 163 NIFIHGKAKSVGCLAMGDIAIEELFLLVERAKIQNVQVVIS 203
>gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9]
gi|46915612|emb|CAG22384.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9]
Length = 246
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAW 85
K P+ E I M ++ + P I +F K E +E+W ++ +A +V +K Y I
Sbjct: 54 KRYSPILEPRISLMFEQVGVQYPPEQIAMFALKEEMQVELWAKDGEA-WVYIKRYDIAKI 112
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN------RTGA 139
SG GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD + R GA
Sbjct: 113 SGKSGPKLREGDHQVPEGIYQVI--GLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRPGA 170
Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180
++ IHG+ S GC AM + ++E++ +V + N+Q I
Sbjct: 171 NIFIHGKAKSVGCLAMGDIAIEELFLLVERAQIQNVQVVIS 211
>gi|149912912|ref|ZP_01901446.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
gi|149813318|gb|EDM73144.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
Length = 165
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 51 PTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P V RI K E + + +L+ + I G K GD + PEG Y+I
Sbjct: 30 PEVTRIIVNKGEREMHLLH-----HGRVLRSFDIHLGFAPEGHKQVEGDGKTPEGEYFID 84
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC---------ASAGCYA 154
NPNS + LSI I +PNE D A G D+ IHG + GC A
Sbjct: 85 RR--NPNSSFHLSIGISYPNEMDVARAASMGMSPGGDIFIHGAPQTVRRHRPDWTEGCIA 142
Query: 155 MNNKQMQEIYAIVRDS 170
+ +K+M+ IYA+V+D
Sbjct: 143 VTDKEMEIIYAMVKDG 158
>gi|187251137|ref|YP_001875619.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191]
gi|186971297|gb|ACC98282.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191]
Length = 189
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 37/177 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+L FAL G ++ + + + EN +I I I K + I+E+
Sbjct: 19 GVLFFALRGNAAGIPLTKEEQENLKKEIPENAVIDK------------IVILKEKRIMEV 66
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
++ LLK YKI G K + GD + PEG Y + NP+S+Y+ ++ +
Sbjct: 67 SQKE-----ELLKSYKISLGFEPKGHKEQQGDGKTPEGIYKVDGK--NPHSRYYKNLGVS 119
Query: 126 FPNEFDKAHNR-----TGADLMIHG-------------ECASAGCYAMNNKQMQEIY 164
+PN+ D+A + G D+ IHG + GC A+ N ++ EIY
Sbjct: 120 YPNDKDRAAAKAKGINPGGDIKIHGIGKDYWHIKENILGDWTLGCIAVTNAEIDEIY 176
>gi|319957168|ref|YP_004168431.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
16511]
gi|319419572|gb|ADV46682.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
16511]
Length = 182
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 35/190 (18%)
Query: 1 MTNRYNILL-FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
MT R +L F IF G +++ + + +S+ KK + P V+ I K+
Sbjct: 1 MTLRLLLLFAFGSLIFAAGPSAFKAVSETVQS-------LSVSKKPSIPKAQKVL-IIKS 52
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E L + + +EY I GPK D++ PEG Y + + +S Y+
Sbjct: 53 ERKLYLLRNGKP-----YREYHIALGKHPVGPKRREHDQKTPEGNYTLDFKK--ADSSYY 105
Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160
+I++ +PN DKA + G +MIHG+ +AGC A++N M
Sbjct: 106 RAIHVSYPNSTDKARAKRLGVNPGGAIMIHGQPNWFGWLSIIRQRFYWTAGCIAVSNGDM 165
Query: 161 QEIYAIVRDS 170
EI+ V
Sbjct: 166 DEIWQAVDPG 175
>gi|52841744|ref|YP_095543.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|30577829|emb|CAD90960.1| LssA protein [Legionella pneumophila]
gi|52628855|gb|AAU27596.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 243
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 16/221 (7%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWK 67
LFA+ LN I + + LI K S P + FK+E +E+W
Sbjct: 26 LFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEIALLAFKSERKVELWA 85
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127
+N + E+ + +Y + +SG GPK+ D+Q PEG Y + N NP S LS+ I +P
Sbjct: 86 KNPNQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NFNPFSSMHLSMMINYP 143
Query: 128 NEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181
N FD+ G ++ IHG+ S GC A+ + + +++ + R N IQ+
Sbjct: 144 NSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFILARRVGLKN----IQV 199
Query: 182 QAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
P + + Q + + F+K
Sbjct: 200 IIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTK 240
>gi|148359048|ref|YP_001250255.1| lipoprotein [Legionella pneumophila str. Corby]
gi|296107097|ref|YP_003618797.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy]
gi|148280821|gb|ABQ54909.1| lipoprotein [Legionella pneumophila str. Corby]
gi|295648998|gb|ADG24845.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy]
Length = 233
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52
M ++IL LFA+ LN I + + LI K S P
Sbjct: 1 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 60
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N
Sbjct: 61 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 118
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166
NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ +
Sbjct: 119 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 178
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
R N IQ+ P + + Q + + F+K
Sbjct: 179 ARRVGLKN----IQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTK 230
>gi|54297427|ref|YP_123796.1| secretion system protein A [Legionella pneumophila str. Paris]
gi|53751212|emb|CAH12623.1| Legionella secretion system protein A [Legionella pneumophila str.
Paris]
Length = 243
Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52
M ++IL LFA+ LN I + + LI K S P
Sbjct: 11 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 70
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N
Sbjct: 71 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 128
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166
NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ +
Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
R N IQ+ P + + Q + + F+K
Sbjct: 189 ARRVGLKN----IQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQISESLKPFKKTK 240
>gi|54294442|ref|YP_126857.1| secretion system protein A [Legionella pneumophila str. Lens]
gi|30577820|emb|CAD90952.1| LssA protein [Legionella pneumophila str. Corby]
gi|53754274|emb|CAH15751.1| Legionella secretion system protein A [Legionella pneumophila str.
Lens]
Length = 243
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52
M ++IL LFA+ LN I + + LI K S P
Sbjct: 11 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 70
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N
Sbjct: 71 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 128
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166
NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ +
Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
R N IQ+ P + + Q + + F+K
Sbjct: 189 ARRVGLKN----IQVIIAPNDLRYQKPSTSTFAQPRWLPELYKQITESLKPFKKTK 240
>gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct]
Length = 167
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 49/187 (26%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F L + + SL K + + + K+E
Sbjct: 2 RWLLALLCLTFASLTQANAAPSLEGKVDK----------------------VLVLKSERK 39
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS+
Sbjct: 40 LLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSM 92
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AMNN M+E+
Sbjct: 93 HISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREV 152
Query: 164 YAIVRDS 170
+++V+D
Sbjct: 153 WSVVKDG 159
>gi|15598951|ref|NP_252445.1| hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1]
gi|107103271|ref|ZP_01367189.1| hypothetical protein PaerPA_01004340 [Pseudomonas aeruginosa PACS2]
gi|116051754|ref|YP_789407.1| hypothetical protein PA14_15840 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889966|ref|YP_002438830.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58]
gi|254236665|ref|ZP_04929988.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719]
gi|254242447|ref|ZP_04935769.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192]
gi|296387735|ref|ZP_06877210.1| hypothetical protein PaerPAb_06264 [Pseudomonas aeruginosa PAb1]
gi|313109166|ref|ZP_07795136.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa
39016]
gi|9949925|gb|AAG07143.1|AE004794_8 hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1]
gi|115586975|gb|ABJ12990.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168596|gb|EAZ54107.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719]
gi|126195825|gb|EAZ59888.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192]
gi|218770189|emb|CAW25951.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58]
gi|310881638|gb|EFQ40232.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa
39016]
Length = 166
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 49/187 (26%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F L + + SL K + + + K+E
Sbjct: 2 RWLLALLCLTFASLTQANAAPSLEGKVDK----------------------VLVLKSERK 39
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS+
Sbjct: 40 LLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSM 92
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AMNN M+E+
Sbjct: 93 HISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREV 152
Query: 164 YAIVRDS 170
+++V+D
Sbjct: 153 WSVVKDG 159
>gi|254436867|ref|ZP_05050361.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307]
gi|198252313|gb|EDY76627.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307]
Length = 163
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 40/180 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M NR A L C + + P ++++ K
Sbjct: 1 MMNRRTFTSAAALFALTACSNKFRV---YNGPAVTSVVVQ-----------------KGR 40
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + N +L++Y+ G K GD + PEG YYI NPNS+++L
Sbjct: 41 RKMFLLHNN-----KVLEQYEFELGFAPTGHKKTEGDGRTPEGAYYIDRK--NPNSRFYL 93
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167
SI I +PN+ D+A R G D+ IHG +AGC A+ +++M++IYA+V
Sbjct: 94 SIGISYPNDADRARARAMGKSPGGDIFIHGTPRLSLNRDDWTAGCLAVTDREMEDIYAMV 153
>gi|84685767|ref|ZP_01013663.1| ErfK/YbiS/YcfS/YnhG family protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84665860|gb|EAQ12334.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
HTCC2654]
Length = 222
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 79/203 (38%), Gaps = 51/203 (25%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R + A F+ L C ++ P I +FK
Sbjct: 2 MNRRVMLASTAAFVGLTACSKFKT----YNGPEVTE-----------------IFVFKEN 40
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + L EY + +G K + GD + PEG Y I N NP+S + L
Sbjct: 41 RKMYLMHHQTA-----LAEYDVHLGFSPYGHKQQKGDGRTPEGSYRI--NRRNPDSAFHL 93
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYA 165
S+ + +PN+ D+ + G D+ IHG +AGC A+ NK++++IYA
Sbjct: 94 SVGLDYPNDTDRKIAKEVGVSPGGDIFIHGGPTRKEDKNKADWTAGCIAVTNKEIEDIYA 153
Query: 166 IVRDSLRGNMQSHIQIQAFPFRM 188
+VRD I FP +
Sbjct: 154 MVRDGT--------PIHIFPAKQ 168
>gi|116626039|ref|YP_828195.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076]
gi|116229201|gb|ABJ87910.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076]
Length = 140
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I ++K+ + + + +L+ Y+I G K + GD + PEG Y I N
Sbjct: 11 IVVYKSRREMLLLRGES-----ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRR--N 63
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------ECASAGCYAMNNKQM 160
P SKY LS++I +P D R G D+MIHG + GC A++N++M
Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFP 185
EI+++V D I+ P
Sbjct: 124 DEIWSLVPDGT--------PIEILP 140
>gi|163732991|ref|ZP_02140435.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
gi|161393526|gb|EDQ17851.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
Length = 159
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
KR S T + + K + + LLK Y I G K GD + PEG
Sbjct: 19 KRYSGPEVTFVVVNKGARRMHLLHNES-----LLKSYDIHLGFAPVGHKQFEGDGKTPEG 73
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE---------CAS 149
Y I NPNS + LS+ I +PN D A + G D+ IHG+ +
Sbjct: 74 LYRIDRR--NPNSDFHLSLGISYPNVNDYAAAKAVGKSAGGDIFIHGQKSPFRNDDPDWT 131
Query: 150 AGCYAMNNKQMQEIYAIVRD 169
GC A+ N +M+EIYA+V++
Sbjct: 132 WGCIAVTNPEMEEIYAMVQN 151
>gi|99082736|ref|YP_614890.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
gi|99039016|gb|ABF65628.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
Length = 162
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 24/139 (17%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V I N+ +++ N +L EYK+ G K GD + PEG Y I
Sbjct: 22 PPVTSIVVNKGSRKMYLLNES---KVLTEYKVGLGFAPVGHKQVEGDGRTPEGTYLIDRR 78
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAG 151
NP S+++LS+ I +PN D+AH R G D+ IHGE +AG
Sbjct: 79 --NPRSQFYLSLGISYPNSADRAHARSLGASPGGDIFIHGEPNDRADRRRAARVRDWTAG 136
Query: 152 CYAMNNKQMQEIYAIVRDS 170
C A+ N +++EI+++V +
Sbjct: 137 CIAVTNDEIEEIWSMVNNG 155
>gi|226946005|ref|YP_002801078.1| ErfK/YbiS/YcfS/YnhG-like protein [Azotobacter vinelandii DJ]
gi|226720932|gb|ACO80103.1| ErfK/YbiS/YcfS/YnhG-related protein [Azotobacter vinelandii DJ]
Length = 168
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 45/186 (24%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ + L + G + L E + + I + K+E L
Sbjct: 2 RWLLASLCLSVV--GLSQASVLSPGEEQRIVDK-----------------ILVVKSERKL 42
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ R LK YK+ GPK GD++ PEG Y+I W + KY LS++
Sbjct: 43 MLLSRGQP-----LKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWRK--ASDKYNLSMH 95
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIY 164
I +PN D+A R G +M+HG + GC AM N ++E++
Sbjct: 96 ISYPNIRDQAQARAEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEGCIAMRNDDIREVW 155
Query: 165 AIVRDS 170
++V+D
Sbjct: 156 SLVKDG 161
>gi|146308430|ref|YP_001188895.1| hypothetical protein Pmen_3411 [Pseudomonas mendocina ymp]
gi|145576631|gb|ABP86163.1| conserved hypothetical protein [Pseudomonas mendocina ymp]
Length = 167
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97
+++ S + + K+E L + +R +K Y+I G K GD
Sbjct: 16 VLASTTPAISSHAVDKVLVLKSERKLHLQRRGET-----IKSYRISLGKQPNGAKQREGD 70
Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----- 147
+ PEGFY+I W P+ KY LS++I +PN D A + G+ +MIHG
Sbjct: 71 LRTPEGFYWIDWRK--PSDKYQLSLHISYPNARDLARAKEAGVPPGSMIMIHGTPLDEEY 128
Query: 148 ---------ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC AM N M+E++++V+D
Sbjct: 129 PEWFFHTLDWTEGCIAMKNDDMREVWSLVKDG 160
>gi|225024431|ref|ZP_03713623.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC
23834]
gi|224942812|gb|EEG24021.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC
23834]
Length = 200
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 78/214 (36%), Gaps = 43/214 (20%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLS---------ENLIISMQKKRTSPFHP 51
M + + LF + L G + L +Q+ P
Sbjct: 1 MNKKPLLALFGTILLLLGGYVFLRHSSNPPGSLPNTGNSAGLSPRQQSLLQQPALPPGSE 60
Query: 52 TV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+ + K E ++ + DA+ LLK Y I G K GD + PEG Y I N
Sbjct: 61 IAKLVVRKAEREMDAY----DAQGNLLKTYPIALGFSPVGHKQFEGDGKTPEGRYTI--N 114
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAG 151
+ NP+S + ++ I +PN D+ H G D+ IHG + G
Sbjct: 115 DRNPHSSHHKNLGISYPNAADRTHASAQGKNPGGDIKIHGLRNGLGLIGAQHLRRDWTHG 174
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
C A+ + ++ E+Y V+ +I+ P
Sbjct: 175 CIAVTDGEIDELYIHVK--------PQAEIEILP 200
>gi|83952906|ref|ZP_00961635.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83835697|gb|EAP74997.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 158
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 43/176 (24%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
L FL+GC E T +R++K + +L +
Sbjct: 3 GLAAFLSGCASKFRSYGGPEV--------------------TRVRLYKGQRLLVL----- 37
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
D +L+ Y + G K GD + PEG Y + NP S Y LS+ I +PNE
Sbjct: 38 DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGAYVVD--KRNPESTYHLSVGISYPNEA 95
Query: 131 DKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170
D A G D+ IHG +AGC A+ ++Q+++IYA+V+D
Sbjct: 96 DIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAVTDRQIEDIYAMVKDG 151
>gi|126724610|ref|ZP_01740453.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium
HTCC2150]
gi|126705774|gb|EBA04864.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium
HTCC2150]
Length = 166
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 51 PTVIR--IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
PTV R +FK L I+ +L +++ G K GD + PEG Y+I
Sbjct: 31 PTVTRLAVFKESRKLYIFHNET-----VLAAHEVELGFAPVGHKEVEGDGKTPEGRYFID 85
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---------CASAGCYA 154
NPNS + LS+ I +PN+ D+ G D+ IHG+ +AGC +
Sbjct: 86 RR--NPNSSFHLSLGISYPNDADRKAAAELGESPGGDIFIHGQKSLTNRGGDDWTAGCIS 143
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ N +M++IYA+V + + I +P
Sbjct: 144 VTNDEMEDIYAMVPNG--------VPIDIYP 166
>gi|255261385|ref|ZP_05340727.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62]
gi|255103720|gb|EET46394.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62]
Length = 175
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 76/199 (38%), Gaps = 49/199 (24%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + +F LF L GC S P I ++K
Sbjct: 12 MRLFRVLSVFLLFFVLVGCG---SKFKTYNGPEVTR-----------------IAVYKEA 51
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+ + N +L++Y G K GD + PEG Y+I NPNS++ L
Sbjct: 52 RTMYLMHNN-----EVLEKYDFALGFEPVGRKQVEGDGKTPEGNYFIDRR--NPNSRFHL 104
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
S+ I +PN D R G D+ IHG + GC A+ +++M++IYA+
Sbjct: 105 SLGISYPNANDVEVARALGMPPGGDIFIHGTPKRFRNSDDDWTWGCIAVKDREMEQIYAM 164
Query: 167 VRDSLRGNMQSHIQIQAFP 185
V++ I +P
Sbjct: 165 VKNGTV--------ISIYP 175
>gi|254509663|ref|ZP_05121730.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
KLH11]
gi|221533374|gb|EEE36362.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
KLH11]
Length = 172
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 43/189 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L + L+ C ++ P +L+I+ ++ H NE
Sbjct: 1 MDRRAFGLGAVATLGLSACASAKPRFLSYRGPEVTSLVINKGARKMYLLH--------NE 52
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L+EY++ G K GD + PEG Y I NP S+Y L
Sbjct: 53 --------------QILREYEVDLGFAPKGTKTRKGDGRTPEGTYLIDRR--NPRSRYHL 96
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
S+ I +PN D+A + G D+ IHG+ +AGC A+ N++M+
Sbjct: 97 SLGISYPNSADRAQAKAAGVDPGGDIFIHGQPNLRSELKRAKKTPDWTAGCIAVKNEEME 156
Query: 162 EIYAIVRDS 170
EIYA+V +
Sbjct: 157 EIYAMVNEG 165
>gi|163747598|ref|ZP_02154946.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
gi|161379123|gb|EDQ03544.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
Length = 157
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 42/175 (24%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
L + L GC S + P L ++FK++ L ++
Sbjct: 3 GLALGLAGCA---SKFRTYDGPAVTRL-----------------QMFKSDRNLFLFNNTS 42
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+LK Y+I GPK GD + PEG Y + NP+S + LSI I +PNE
Sbjct: 43 -----VLKAYRIDLGFAAEGPKQFEGDGKTPEGTYTVDRR--NPDSLFHLSIGISYPNEA 95
Query: 131 DKAHN-----RTGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170
D A+ G D+ IHG +AGC A++++++++IYA+VRD
Sbjct: 96 DIAYAAAQGQEPGGDIFIHGGPRPGIDAIKPDWTAGCIAVSDREIEDIYAMVRDG 150
>gi|255066178|ref|ZP_05318033.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256]
gi|255049723|gb|EET45187.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256]
Length = 194
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 38/170 (22%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
S+ + +E PL EN +I + + K++ + + + LL
Sbjct: 35 ATSGESSVAEPSETPLPENAVID------------RLVVHKSKRTMSAYSQG-----KLL 77
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-- 135
K Y I G K GD + PEG Y I N+ NPNS Y ++ + +PNE DKA+
Sbjct: 78 KTYPIALGKQPVGHKHFEGDGKTPEGKYRI--NDRNPNSAYHKNLGVSYPNEADKAYAAA 135
Query: 136 ---RTGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168
G + IHG + GC A+ ++++ E+Y V+
Sbjct: 136 QGKSPGGLIKIHGIKNGWGSIGKRHLQRDWTDGCIAVTDEEIDELYRSVK 185
>gi|153874627|ref|ZP_02002774.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152068908|gb|EDN67225.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 172
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 48 PFHPTVIRI--FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P+ P + + FK E LE+W + ++ Y I A SG GPK+ GD Q PEG Y
Sbjct: 2 PYPPQRLALLGFKAEKRLEVWAEQQT-TWQFIRNYPILAASGVAGPKLREGDRQVPEGIY 60
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHN----RT--GADLMIHGECASAGCYAMNNKQ 159
I + LNPNS+Y LS+ I +PNEFD+ RT G ++ IHG+ S GC A+ ++
Sbjct: 61 RINF--LNPNSRYHLSMQINYPNEFDRRKAALENRTDLGGEIFIHGKAVSIGCLAIGDEA 118
Query: 160 MQEIYAIV 167
++E++ +V
Sbjct: 119 IEELFVLV 126
>gi|85859827|ref|YP_462029.1| hypothetical protein SYN_00443 [Syntrophus aciditrophicus SB]
gi|85722918|gb|ABC77861.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
Length = 313
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIR--IFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
P +E I +K P+ + + K E LE+W R D +V ++ Y I A SG+
Sbjct: 60 GPRAEARIKPFFEKAGLPYPSRRLAFVVLKEEKKLEVWTR-YDGNWVHVRTYDILAASGS 118
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT------GADLM 142
GPK + GD Q PEG Y I +LNP S++ LS+ I +PN +D R G D+
Sbjct: 119 RGPKRKKGDYQVPEGIYQIV--SLNPASRFHLSMKINYPNAYDLQMARNEQRSNLGGDIF 176
Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195
IHG+ S GC AM NK ++E++ +V + N +++ P + + L
Sbjct: 177 IHGKTRSHGCLAMGNKAIEELFVLVAKTRPRN----VKVVIAPHDLRKSDPAL 225
>gi|254476164|ref|ZP_05089550.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11]
gi|214030407|gb|EEB71242.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11]
Length = 175
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L A + + GC S ++K + P V I N+
Sbjct: 1 MDRRAFGLGIAATLGVAGCSSSTGPVNKF----------------LAYNGPEVTSIVVNK 44
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+++ + + +L+EYK+ G K GD + PEG Y+I NPNS Y L
Sbjct: 45 GARKVYLMH---DQDILREYKMDLGFAPAGHKAVEGDGKTPEGTYFIDRR--NPNSAYHL 99
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
SI I +PN D+A + G ++ IHGE +AGC A+ N +++
Sbjct: 100 SIGISYPNAEDRAKAAAMGKKPGGEIFIHGEPNSAKARKRAARVDDWTAGCIAVKNHEIE 159
Query: 162 EIYAIVRDS 170
EIYA+V D
Sbjct: 160 EIYAMVADG 168
>gi|222053244|ref|YP_002535606.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221562533|gb|ACM18505.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 323
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
E L + I I K + L ++ + +LK Y+I G
Sbjct: 165 QKKIEGLEQKISALTIQKVTADRILIEKKQRRLTLFSKG-----EVLKTYRIALGGNPDG 219
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG 145
PK GD + PEG Y+I + N +S+Y L+++I +PNE DK + G ++MIHG
Sbjct: 220 PKERQGDNKTPEGTYFID--SRNRDSRYHLALHISYPNERDKRRAKELGVAPGGNIMIHG 277
Query: 146 --------------ECASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ ++++ EI V +
Sbjct: 278 LKNGFSYVGDLHTKADWTKGCIAVTDEEIAEIAKAVPNG 316
>gi|330504649|ref|YP_004381518.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01]
gi|328918935|gb|AEB59766.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01]
Length = 167
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E L + +R +K Y+I G K GD + PEGFY+I W
Sbjct: 32 VLVLKSERKLHLQQRGET-----IKSYRISLGKQPDGAKQREGDLRTPEGFYWIDWRK-- 84
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154
P+ KY LS++I +PN D A + G+ +MIHG + GC A
Sbjct: 85 PSDKYQLSLHISYPNARDLAKAKEAGVPPGSMIMIHGTPLDEEYPEWFFHTLDWTEGCIA 144
Query: 155 MNNKQMQEIYAIVRDS 170
M N M+E++++V+D
Sbjct: 145 MKNDDMREVWSLVKDG 160
>gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB]
gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB]
Length = 314
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 34/151 (22%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K + L + R+ +LK YKI GPKI GD + PEG Y I + N
Sbjct: 179 ILIEKRKRRLTLIARD-----KVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIID--SRN 231
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCYA 154
+S+Y L+++I +PN+ D+ R G ++MIHG + GC A
Sbjct: 232 RDSRYHLALHISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIA 291
Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ N++++EI +VR+ + P
Sbjct: 292 VTNEEIEEIARLVRNGTI--------VHILP 314
>gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath]
gi|53758776|gb|AAU93067.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 292
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P V+ K E LE+W R+ ++Y L++ Y I A SG+ GPK+ GD+Q PEG Y I
Sbjct: 105 PPREVVLVGLKQEKKLELWARD-GSDYRLIRHYDIQAASGSAGPKLRQGDKQVPEGVYRI 163
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHN------RTGADLMIHGECASAGCYAMNNKQMQ 161
LNPNS Y LS+ + +PN+FD H + G+D+ IHG SAGC AM ++ ++
Sbjct: 164 V--GLNPNSNYHLSMKLNYPNDFDLYHAQLEGRTQPGSDIFIHGRAVSAGCLAMGDEAIE 221
Query: 162 EIYAIVRDSLRGNMQSHI 179
E++ + + N++ I
Sbjct: 222 ELFVLTAQVGKENVKVVI 239
>gi|83649037|ref|YP_437472.1| hypothetical protein HCH_06401 [Hahella chejuensis KCTC 2396]
gi|83637080|gb|ABC33047.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 178
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 41/194 (21%)
Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72
F+FL G + S + + + +P +++ K +L + K
Sbjct: 5 FLFLTGVLFACSAGAEQAQ----TSLALSESAYMAPLVDK-VQVKKASRLLILLKEGKP- 58
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
+ Y I G K GDE+ PEG Y + W NPNS + SI++ +PN+ D
Sbjct: 59 ----FRVYPIALGDKPLGHKQFEGDERTPEGTYSLDWR--NPNSAFHKSIHVSYPNDQDI 112
Query: 133 AHNR-----TGADLMIHGEC----------------ASAGCYAMNNKQMQEIYAIVRDSL 171
+ + G +MIHG + GC A+NN+ M EI+++V D
Sbjct: 113 EYAKSQGREPGGMIMIHGWPNGFNHDRDSIWLYEFDWTDGCIAVNNQAMDEIWSLVPDGT 172
Query: 172 RGNMQSHIQIQAFP 185
I+ P
Sbjct: 173 --------PIEILP 178
>gi|118579010|ref|YP_900260.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
gi|118501720|gb|ABK98202.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
Length = 334
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 23 RSLIDKAEHPLSENLIISMQKK----RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
+ ++E I +++K T I I K + L ++ RN LK
Sbjct: 164 EAADKESEIAALRRTIADLERKVLECAVKTRAVTRILIEKGDRRLTLFSRN-----EALK 218
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136
Y+I GPK GD + PEG Y I N NS+Y LS++I +PNE DK +
Sbjct: 219 SYRIALGGAPSGPKEREGDNKTPEGAYVIDSK--NGNSQYHLSLHISYPNERDKKRAQEL 276
Query: 137 ---TGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVRDS 170
G D+MIHG + GC A+++++++EIY +V+
Sbjct: 277 GVSPGGDIMIHGIKNGFSWVGDSQADADWTRGCVAVSDEEIEEIYKLVQIG 327
>gi|110677799|ref|YP_680806.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
114]
gi|109453915|gb|ABG30120.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
114]
Length = 153
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
KR S T + + K + + L+ Y I G K GD + PEG
Sbjct: 13 KRYSGPEVTFVVVNKGARRMHLLHNETA-----LRSYDIHLGFAPVGHKQFEGDGKTPEG 67
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE---------CAS 149
Y I NPNS + LS+ I +PN D A + G D+ IHG+ +
Sbjct: 68 LYRIDRR--NPNSDFHLSLGISYPNVNDYAAAKAVGKSPGGDIFIHGQKSPFRKDEPDWT 125
Query: 150 AGCYAMNNKQMQEIYAIVRD 169
GC A+ N +++EIYA+V++
Sbjct: 126 WGCIAVTNPEIEEIYAMVQN 145
>gi|119386750|ref|YP_917805.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
gi|119377345|gb|ABL72109.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
Length = 169
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 30/152 (19%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V ++ N+ ++ N + +LK Y+I + G K GD + PEG YYI
Sbjct: 31 PPVTQVVVNKGARQMLLLNGN---TVLKAYRIGLGNEPLGHKQFEGDGKTPEGLYYIDRR 87
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHG------------ECASAGCY 153
NP+S+Y LSI I +PN D G+D+ IHG + +AGC
Sbjct: 88 --NPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCI 145
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ + ++++IYA+VRD I P
Sbjct: 146 AVTDAEVEDIYAMVRDGT--------PIMITP 169
>gi|163745086|ref|ZP_02152446.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
gi|161381904|gb|EDQ06313.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
Length = 160
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
KR + T + + K++ + + N +L++Y I G K GD + PEG
Sbjct: 20 KRYNGPEVTYVVVNKSQRRMMLLHHN-----RVLEDYPIKLGFAPVGHKTVEGDGRTPEG 74
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE---------CAS 149
Y I NPNS++ LSI I +PN+ D + R G D+ IHG+ +
Sbjct: 75 LYRIDRR--NPNSRFHLSIGIDYPNQLDVEYARSMGKSPGGDIFIHGQKDPRQKEKNDWT 132
Query: 150 AGCYAMNNKQMQEIYAIVRDS 170
GC A+ NK+++++YA+VRD
Sbjct: 133 WGCIAVTNKEIEDVYAMVRDG 153
>gi|152986155|ref|YP_001346746.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7]
gi|150961313|gb|ABR83338.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7]
Length = 166
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 49/187 (26%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + + L F L + + +L K + + + K+E
Sbjct: 2 RWLLAVLCLTFASLIQANAAPTLDGKVDK----------------------VLVLKSERK 39
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS+
Sbjct: 40 LLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLSM 92
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AMNN M+E+
Sbjct: 93 HISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMREV 152
Query: 164 YAIVRDS 170
+++V+D
Sbjct: 153 WSVVKDG 159
>gi|327479744|gb|AEA83054.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 167
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 48/187 (25%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F + + + SL SP + + K+E
Sbjct: 2 RWLLALLCLTFTAFSHANATPSL-------------------GGSPIDKVL--VIKSERK 40
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L + LK Y+I G K GD + PEGFY+I W + KY LS+
Sbjct: 41 LHLVSAGQT-----LKSYRISLGKQPNGAKQREGDMRTPEGFYWIDWRKT--SDKYNLSM 93
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A + G+ +M+HG + GC A+ N M+EI
Sbjct: 94 HISYPNARDLARAQQEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREI 153
Query: 164 YAIVRDS 170
+ +V+D
Sbjct: 154 WGLVKDG 160
>gi|308535397|ref|YP_002140778.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
bemidjiensis Bem]
gi|308052742|gb|ACH40982.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
domain-containing protein [Geobacter bemidjiensis Bem]
Length = 335
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 33 LSENLIISMQKKRTSPFHPT----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
+ + I + +++ + P PT + I K E L + + ++K YKI
Sbjct: 175 VLQQEIAAQEEEISPPPVPTGPADKVLIEKKERRLTLLSKG-----EVIKSYKISLGENP 229
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMI 143
GPK GD + PEG Y I + N +S+Y LS++I +PNE DK + G ++MI
Sbjct: 230 NGPKERQGDNKTPEGIYRID--SRNNDSQYHLSLHISYPNEQDKKRAKQLGVAPGGNIMI 287
Query: 144 HGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
HG + GC A+ ++++QEI +V
Sbjct: 288 HGMRNGFSWFGEHHTLIDWTKGCIAVTDEEIQEIAELVPIG 328
>gi|288941780|ref|YP_003444020.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
gi|288897152|gb|ADC62988.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
Length = 210
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 37/154 (24%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K++ LE+ + ++++Y++ G K GD++ PEG Y + W N
Sbjct: 72 VVVKKSQRRLELL-----SGGKVVRQYRVALGGAPVGHKYREGDQRTPEGRYTLNWR--N 124
Query: 114 PNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGEC----------------ASAG 151
P S ++ +I+I +P D+A +R G +MIHG + G
Sbjct: 125 PKSNFYKAIHISYPTAKDRATSRQLGYSNPGGMIMIHGLPNYIQSASLRQQYANRDWTQG 184
Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
C A+ N +M EI+++V+D IQ P
Sbjct: 185 CIAVQNHEMDEIWSLVKDGT--------PIQIMP 210
>gi|261379335|ref|ZP_05983908.1| putative lipoprotein [Neisseria subflava NJ9703]
gi|284797774|gb|EFC53121.1| putative lipoprotein [Neisseria subflava NJ9703]
Length = 186
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 38/183 (20%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ + +F F + ++ +E L EN +I + + K++ +
Sbjct: 14 LSAVAALVFWFAAPIRSTTTVATPSEAALPENAVID------------RLVVHKSKRTMS 61
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ + LLK Y I G K GD + PEG Y I N NPNS Y ++ +
Sbjct: 62 AYSQG-----RLLKTYPISLGKQPVGHKQFEGDGKTPEGKYRI--NERNPNSGYHKNLGV 114
Query: 125 GFPNEFDKAHN-----RTGADLMIHG--------------ECASAGCYAMNNKQMQEIYA 165
+PNE DKA+ G + IHG + + GC A+ ++++ E+Y
Sbjct: 115 SYPNEADKAYAAAQGKSPGGLIKIHGMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYR 174
Query: 166 IVR 168
V+
Sbjct: 175 SVK 177
>gi|254464093|ref|ZP_05077504.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
gi|206685001|gb|EDZ45483.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
Length = 135
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
I K+ L + + +L+EY + G K GD + PEG Y I NPN
Sbjct: 2 INKSSRKLYLLHKE-----EVLREYDVDLGFAPQGHKQFEGDGKTPEGTYVIDRR--NPN 54
Query: 116 SKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMN 156
S+Y LS+ I +PN D+A + G ++ IHG+ +AGC A++
Sbjct: 55 SRYHLSVGISYPNVEDRATAEAAGKKPGGEIFIHGQPNNPKERKRAARVSDWTAGCIAVS 114
Query: 157 NKQMQEIYAIVRDS 170
N ++EIYA+V+D
Sbjct: 115 NDDIEEIYAMVQDG 128
>gi|126463622|ref|YP_001044736.1| hypothetical protein Rsph17029_2862 [Rhodobacter sphaeroides ATCC
17029]
gi|332559675|ref|ZP_08413997.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N]
gi|126105286|gb|ABN77964.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
gi|332277387|gb|EGJ22702.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N]
Length = 164
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 48/195 (24%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I L L + L GC S+ I K + P + +++ K + +
Sbjct: 4 LKITLIVLALGLAGCGDSK--IRKYDGPPVTS-----------------VQVHKADRKMY 44
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ +L++Y + G K GD + PEG Y+I NP S Y LS+ I
Sbjct: 45 LL-----NGSKVLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFID--RQNPRSTYHLSLGI 97
Query: 125 GFPNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYAIVRDS 170
+PN D+ + G D+ IHG +AGC A+ + +++E+Y++VR
Sbjct: 98 SYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYSMVRLG 157
Query: 171 LRGNMQSHIQIQAFP 185
I P
Sbjct: 158 T--------PIYILP 164
>gi|77464780|ref|YP_354284.1| hypothetical protein RSP_1201 [Rhodobacter sphaeroides 2.4.1]
gi|221640697|ref|YP_002526959.1| hypothetical protein RSKD131_2598 [Rhodobacter sphaeroides KD131]
gi|77389198|gb|ABA80383.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|221161478|gb|ACM02458.1| Hypothetical Protein RSKD131_2598 [Rhodobacter sphaeroides KD131]
Length = 166
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 48/195 (24%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I L L + L GC S+ I K + P + +++ K + +
Sbjct: 6 LKITLIVLALGLAGCGDSK--IRKYDGPPVTS-----------------VQVHKADRKMY 46
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ +L++Y + G K GD + PEG Y+I NP S Y LS+ I
Sbjct: 47 LL-----NGSKVLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFID--RQNPRSTYHLSLGI 99
Query: 125 GFPNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYAIVRDS 170
+PN D+ + G D+ IHG +AGC A+ + +++E+Y++VR
Sbjct: 100 SYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYSMVRLG 159
Query: 171 LRGNMQSHIQIQAFP 185
I P
Sbjct: 160 T--------PIYILP 166
>gi|226954427|ref|ZP_03824891.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
gi|226834776|gb|EEH67159.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
Length = 198
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 30/139 (21%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I +FK++ IL++ N +++EY + G K GD + PEG Y I W N
Sbjct: 59 IEVFKHQRILQLKHHN-----EIIREYPMRLGFNPLGHKQFEGDGKTPEGTYSIDWR--N 111
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------------CASA 150
PNS Y+ S++I +PNE D A+ + G D+MIHG +
Sbjct: 112 PNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGSVPKEYLNLPTSMTYFPQGDWTL 171
Query: 151 GCYAMNNKQMQEIYAIVRD 169
GC A+ N M EI+ +V +
Sbjct: 172 GCIAVRNIDMDEIWQLVDN 190
>gi|148264213|ref|YP_001230919.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
gi|146397713|gb|ABQ26346.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
Length = 337
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K E L + + +LK YKI GPK GD + PEG Y+I + N
Sbjct: 202 ILIEKKERRLMLISKG-----EVLKTYKIALGGNPNGPKERQGDNKTPEGTYFID--SRN 254
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCYA 154
+S Y LS++I +PNE DK + TG ++MIHG + GC A
Sbjct: 255 KDSHYHLSLHISYPNERDKKRAKELGVSTGGNIMIHGIKNGFSWVGDFHTEVDWTKGCIA 314
Query: 155 MNNKQMQEIYAIVRDS 170
+ +++++EI + +
Sbjct: 315 VTDEEIEEIAKLAPNG 330
>gi|77457235|ref|YP_346740.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens Pf0-1]
gi|77381238|gb|ABA72751.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 171
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 44/187 (23%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ + LF L + + + PL E +++ +
Sbjct: 2 RWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVLVLKSAHQLQLIA------------- 48
Query: 64 EIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+ LK Y+I G GPK+ GD++ PEGFY+I W + K+ LS+
Sbjct: 49 ---------DGKPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKTSE--KFNLSM 97
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AM N M+E+
Sbjct: 98 HISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMREV 157
Query: 164 YAIVRDS 170
+ +V D
Sbjct: 158 WNLVPDG 164
>gi|308050605|ref|YP_003914171.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
gi|307632795|gb|ADN77097.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
Length = 248
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103
+ P ++ I K + +E+W + D ++ L+ Y I SG+ PK+ GD PEG
Sbjct: 51 EGFKPVAMKLVAI-KADRRMEVWLQGADGQWGELRSYPILEASGSLRPKMRQGDFLVPEG 109
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGECASAGCYAMNN 157
Y I NPNS Y LS+ I +PN D+ G D+ IHG S GC AM +
Sbjct: 110 VYRIEAA--NPNSLYHLSLKIDYPNAMDQHYGAMEQRGDLGGDIFIHGRDVSQGCLAMGD 167
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQ 180
+ ++E++ + D N++ I
Sbjct: 168 RYIEELFVLAHDIGLENIEVVIS 190
>gi|294651441|ref|ZP_06728755.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822687|gb|EFF81576.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
19194]
Length = 212
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 30/139 (21%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I +FK++ IL++ N +++EY + G K GD + PEG Y I W N
Sbjct: 73 IEVFKHQRILQLKHHN-----EIIREYPMRLGFNPLGHKQFEGDGKTPEGTYSIDWR--N 125
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------------CASA 150
PNS Y+ S++I +PNE D A+ + G D+MIHG +
Sbjct: 126 PNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGSVPKEYLNLPTSMTYFPQGDWTL 185
Query: 151 GCYAMNNKQMQEIYAIVRD 169
GC A+ N M EI+ +V +
Sbjct: 186 GCIAVRNIDMDEIWQLVDN 204
>gi|330811494|ref|YP_004355956.1| hypothetical protein PSEBR_a4539 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379602|gb|AEA70952.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 168
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 47/187 (25%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ ++LF L S + + E +++ +
Sbjct: 2 RWLLVLFCLSFT---AMSQASAVGTYNGKVIEKVLVLKSAHQLQLI-------------- 44
Query: 64 EIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+ LK Y+I G GPK+ GD++ PEGFY+I W + N Y+LS+
Sbjct: 45 --------NDGKPLKTYRISLGRGAKKGPKLIEGDKRTPEGFYWIDWRKTSEN--YYLSM 94
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AM N M+E+
Sbjct: 95 HISYPNISDAARARREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMREV 154
Query: 164 YAIVRDS 170
+ +V D
Sbjct: 155 WNLVPDG 161
>gi|150395748|ref|YP_001326215.1| hypothetical protein Smed_0524 [Sinorhizobium medicae WSM419]
gi|150027263|gb|ABR59380.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 180
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
FL GC ++ A ++ + + +FK +L++++
Sbjct: 6 FLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGE----- 60
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD--K 132
LL+EY + GPK GD++ PEG Y + W NP S ++ SI+I +P D +
Sbjct: 61 KLLREYPVVLGGNPVGPKRREGDQKTPEGSYVLDWR--NPGSSFYKSIHISYPAPKDLEE 118
Query: 133 AHNR---TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRD 169
A R G +MIHG+ + GC A+ N +M EI+ +V +
Sbjct: 119 AAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTNAEMDEIWDMVPN 172
>gi|315267942|gb|ADT94795.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
Length = 170
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
++S + ++ I K+E+ + + + + +LK+Y+I G K++
Sbjct: 17 AALVSPVLHASGMGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKE 71
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---- 146
GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 72 GDQRTPQGRYTLDYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKS 129
Query: 147 ----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ +V + I+ +P
Sbjct: 130 PLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 170
>gi|270160116|ref|ZP_06188772.1| Legionella secretion system protein A [Legionella longbeachae
D-4968]
gi|269988455|gb|EEZ94710.1| Legionella secretion system protein A [Legionella longbeachae
D-4968]
Length = 264
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 23/236 (9%)
Query: 1 MTNRYNILLF-------ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52
M + +++ A+ LN + + + L + S P
Sbjct: 32 MKRVFALIMIVFSFNSYAMAPKLNWDQAVDRAVQRYGLRVEPQLKSYFSRAGVSYPPREL 91
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y + N
Sbjct: 92 ALLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NF 149
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166
NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ +
Sbjct: 150 NPFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 209
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
R N I++ P + K Q + + F+K++
Sbjct: 210 ARRVGLNN----IKVIIAPNDLRKKKPSTSTFAQPRWLPELYKQIAESLKPFDKSN 261
>gi|160875753|ref|YP_001555069.1| hypothetical protein Sbal195_2641 [Shewanella baltica OS195]
gi|160861275|gb|ABX49809.1| conserved hypothetical protein [Shewanella baltica OS195]
Length = 188
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
++S + ++ I K+E+ + + + + +LK+Y+I G K++
Sbjct: 35 AALVSPVLHASGMGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKE 89
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---- 146
GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 90 GDQRTPQGRYTLDYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKS 147
Query: 147 ----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ +V + I+ +P
Sbjct: 148 PLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 188
>gi|256823749|ref|YP_003147712.1| hypothetical protein Kkor_2536 [Kangiella koreensis DSM 16069]
gi|256797288|gb|ACV27944.1| conserved hypothetical protein [Kangiella koreensis DSM 16069]
Length = 243
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNV 70
L+I + G ++ ++ + +S P + K E LE+W +
Sbjct: 31 LYIKVAGARTVEDVVQTYGEEARNRMVPYFEAAGSSYPPGSVALIAIKEEATLELWDTSA 90
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
A V +++Y + A SG GPK+ GD Q PEG Y I + LNPNS Y LS+ + +PN+F
Sbjct: 91 -ANPVFIRKYSVLAQSGVAGPKLREGDMQVPEGIYRIEY--LNPNSSYHLSMKLNYPNDF 147
Query: 131 DKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
D H R G ++ IHG+ S GC AM ++ +E++ + D +I +
Sbjct: 148 DLTHARAEGRSEPGTNIFIHGKAVSIGCLAMGDEVAEELFVLASDI----GHRNIDVAIA 203
Query: 185 PFRMTSKNMQLYQNNPN-YSFWNMLKLGHDYFE 216
P + +Q P + L YF
Sbjct: 204 PKDPRKEQLQPISELPWTEELYQDLTA---YFA 233
>gi|56694959|ref|YP_165304.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
Length = 202
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 43/189 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R+ L A + L+ C S + P +++I+ ++
Sbjct: 31 MDRRHFGLGAAAALGLSACGSQDSKFRRYYGPAVTSIVINKGARKMYLL----------- 79
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+LKEYK+ G K GD + PEG Y I NPNS + L
Sbjct: 80 -----------NNEKVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLIDRR--NPNSAFHL 126
Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
S+ I +PN D A+ + G ++ IHGE +AGC A+ N +++
Sbjct: 127 SLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWTAGCIAVKNDEIE 186
Query: 162 EIYAIVRDS 170
EIYA+VRD
Sbjct: 187 EIYAMVRDG 195
>gi|78223705|ref|YP_385452.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
gi|78194960|gb|ABB32727.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
Length = 175
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 34/158 (21%)
Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
SP + ++K++ +LE+ + L++ Y++ GPK+ GD + PEG Y
Sbjct: 33 SPPTVDRVVVYKSKRLLEL-----RSGQNLIRSYRVALGRNPVGPKVRAGDFRTPEGIYR 87
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC-------------- 147
+ +L S++F SI+I +PN D A R G D+MIHG
Sbjct: 88 LDRRSL--QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFD 145
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M EI+ +VR+ I+ P
Sbjct: 146 WTKGCIAVTNAEMTEIWHLVRNGT--------PIEILP 175
>gi|149204353|ref|ZP_01881320.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035]
gi|149142238|gb|EDM30285.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035]
Length = 167
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P V R+ N+ E++ + + L+ YK+ G K GD + PEG Y+I
Sbjct: 32 PDVTRVIVNKGEREMFLLHHN---RTLERYKVDLGFSPSGHKQFEGDGRTPEGEYHIDRR 88
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMN 156
NPNS + LS+ I +PNE D A+ + G D+ IHGE +AGC ++
Sbjct: 89 --NPNSAFHLSLGISYPNEADIAYAKALGKSPGGDIFIHGEPNALAFLSPDWTAGCISVK 146
Query: 157 NKQMQEIYAIVRDS 170
N++M+++YA+VRD
Sbjct: 147 NREMEDVYAMVRDG 160
>gi|294675749|ref|YP_003576364.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
gi|294474569|gb|ADE83957.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
Length = 167
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 46/183 (25%)
Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVL 76
C + P I++FK + + ++ + +
Sbjct: 17 AACGGDSAKFRNYSGPRVTQ-----------------IQVFKRKRKMFLFVGD-----DV 54
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN- 135
+++YKI G K GD + PEG Y+I + NPNS Y LS+ + +PNE D A+
Sbjct: 55 VRKYKIALGGNPVGKKRFEGDGKTPEGLYHISMH--NPNSAYHLSLRVSYPNEADTAYAE 112
Query: 136 ----RTGADLMIHGE---------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
+ G D+MIHG+ +AGC A+ + +++EI+A+V + I
Sbjct: 113 AHGRKPGGDIMIHGQGRKYRGTRGDWTAGCIAVKDDEIEEIFAMVPNGT--------PIF 164
Query: 183 AFP 185
FP
Sbjct: 165 IFP 167
>gi|254496466|ref|ZP_05109343.1| secretion system protein A [Legionella drancourtii LLAP12]
gi|254354322|gb|EET12980.1| secretion system protein A [Legionella drancourtii LLAP12]
Length = 243
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 34 SENLIISMQKKRTSPFHP--TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
E + S KK + P + FK+E +E+W +N D + + Y + +SG GP
Sbjct: 50 VEPQLKSYFKKAGVSYPPRNIALLAFKSERKVELWAKNQDQGWKHVHNYPLTGFSGRLGP 109
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHG 145
K+ D+Q PEG Y + N NP S LS+ I +PN +D+ G ++ IHG
Sbjct: 110 KLRENDKQIPEGVYKLV--NFNPFSSMHLSMMINYPNNYDRQKGYQDGRRNLGNNIFIHG 167
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNY 202
+ S GC A+ + + +++ + R R ++ HIQ+ P + +K Q
Sbjct: 168 KNLSVGCLAIGDLAIDQLFILAR---RVGLE-HIQVIIAPNDLRNKKPSTSTFAQPRWLP 223
Query: 203 SFWNMLKLGHDYFEKN 218
+ + F+K+
Sbjct: 224 ELYKQIAESLKPFDKS 239
>gi|298506428|gb|ADI85151.1| lipoprotein, putative [Geobacter sulfurreducens KN400]
Length = 174
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 38/164 (23%)
Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85
+ E+PL N + I K++ L + +N LK Y++
Sbjct: 23 ARRLENPLPANATADK------------VLIEKSKRQLTLLNKNTP-----LKTYEVSLG 65
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGAD 140
G K E GD + PEG Y I LN SKY ++++ +P+ D A + G D
Sbjct: 66 KEPVGKKTEEGDGRTPEGIYSIDRRKLN--SKYHRALHVSYPSAEDTAQAKARGVSPGGD 123
Query: 141 LMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170
+MIHG + GC A+ N +++EI+ +V D
Sbjct: 124 IMIHGLPNGIGFIGKLHTKRDWTLGCIAVTNPEIEEIWRVVPDG 167
>gi|146281566|ref|YP_001171719.1| hypothetical protein PST_1182 [Pseudomonas stutzeri A1501]
gi|145569771|gb|ABP78877.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 167
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 48/187 (25%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F + + + SL SP + + K+E
Sbjct: 2 RWLLALLCLTFTAFSHANATPSL-------------------GGSPIDKVL--VIKSERK 40
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L + LK Y+I G K GD + PEG Y+I W + KY LS+
Sbjct: 41 LHLVSAGQT-----LKSYRISLGKQPNGAKQREGDMRTPEGLYWIDWRKT--SDKYNLSM 93
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A + G+ +M+HG + GC A+ N M+EI
Sbjct: 94 HISYPNARDLARAQQEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREI 153
Query: 164 YAIVRDS 170
+ +V+D
Sbjct: 154 WGLVKDG 160
>gi|260431994|ref|ZP_05785965.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415822|gb|EEX09081.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 192
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 43/189 (22%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L + L+ C S + P +++++ ++ H
Sbjct: 21 MDRRAFGLGALATLSLSACGTSGPRFLTYDGPEVTSIVVNKGARKMYLLH---------- 70
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L+EY I G K GD + PEG Y I NP S+Y L
Sbjct: 71 ------------HEQILREYDIDLGFAPNGTKTRRGDGRTPEGTYLIDRR--NPRSRYHL 116
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
S+ I +PN D A + G D+ IHG+ +AGC A+ N +++
Sbjct: 117 SVGISYPNAQDIAKAKAMGVDPGGDIFIHGQPNLRKELKRAKKTPDWTAGCIAVKNHEIE 176
Query: 162 EIYAIVRDS 170
EIYA+V++
Sbjct: 177 EIYAMVKEG 185
>gi|212634603|ref|YP_002311128.1| ErfK/YbiS/YcfS/YnhG protein [Shewanella piezotolerans WP3]
gi|212556087|gb|ACJ28541.1| ErfK/YbiS/YcfS/YnhG [Shewanella piezotolerans WP3]
Length = 137
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 34/152 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+E+ L + + E +LK Y+I G K+ GD++ PEG Y + +
Sbjct: 1 MVVVTKSESSLSLLR-----EGKVLKSYRIAMGDNPVGHKLTEGDQRTPEGRYLLDYKK- 54
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S Y+ SI+I +PN+ D+ G +MIHGE + GC
Sbjct: 55 -SDSAYYRSIHISYPNDEDRLRANALGIEPGGQIMIHGENPNSSLSPIEAQQYNWTDGCI 113
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ N +M E++ + + I+ +P
Sbjct: 114 AVTNAEMDELWRAIDEGT--------PIEIWP 137
>gi|304409118|ref|ZP_07390739.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
gi|307303121|ref|ZP_07582876.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
gi|304352939|gb|EFM17336.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
gi|306913481|gb|EFN43903.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
Length = 188
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 26/154 (16%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
++S + ++ I K+E+ + + + + +LK+Y+I G K++
Sbjct: 35 AALVSPVLHASGMGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKE 89
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---- 146
GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 90 GDQRTPQGRYTLDYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKS 147
Query: 147 ----------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N +M E++ +V +
Sbjct: 148 PLSPEQAQQYNWTDGCIAITNAEMDEVWKVVDEG 181
>gi|253559443|gb|ACT32405.1| hypothetical protein [Pseudomonas fluorescens]
Length = 168
Score = 154 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 47/187 (25%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ ++LF L S + + E +++ +
Sbjct: 2 RWLLVLFCLSFT---TVSQASAVGTYNGKVIEKVLVLKSAHQLQLI-------------- 44
Query: 64 EIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+ LK Y+I G GPK+ GD++ PEGFY++ W + +++LS+
Sbjct: 45 --------NDGKPLKTYRISLGKGAKKGPKLIEGDKRTPEGFYWLDWRKT--SDRFYLSM 94
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G +MIHG + GC AM N M+E+
Sbjct: 95 HISYPNISDAARARREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMREV 154
Query: 164 YAIVRDS 170
+ +V D
Sbjct: 155 WNLVPDG 161
>gi|289165107|ref|YP_003455245.1| Legionella secretion system protein A [Legionella longbeachae
NSW150]
gi|288858280|emb|CBJ12148.1| Legionella secretion system protein A [Legionella longbeachae
NSW150]
Length = 243
Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 23/236 (9%)
Query: 1 MTNRYNILLF-------ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52
M + +++ A+ LN + + + L + S P
Sbjct: 11 MKRVFALIMIVFSFNSYAMAPKLNWDQAVDRAVQRYGLRVEPQLKSYFSRAGVSYPPREL 70
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y + N
Sbjct: 71 ALLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NF 128
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166
NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ +
Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188
Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQ---LYQNNPNYSFWNMLKLGHDYFEKNH 219
R N I++ P + K Q + + F+K++
Sbjct: 189 ARRVGLNN----IKVIIAPNDLRKKKPSTSTFAQPRWLPELYKQIAESLKPFDKSN 240
>gi|126174741|ref|YP_001050890.1| hypothetical protein Sbal_2528 [Shewanella baltica OS155]
gi|153001040|ref|YP_001366721.1| hypothetical protein Shew185_2521 [Shewanella baltica OS185]
gi|217973000|ref|YP_002357751.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
gi|125997946|gb|ABN62021.1| conserved hypothetical protein [Shewanella baltica OS155]
gi|151365658|gb|ABS08658.1| conserved hypothetical protein [Shewanella baltica OS185]
gi|217498135|gb|ACK46328.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
Length = 188
Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 26/154 (16%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
++S + ++ I K+E+ + + + + +LK+Y+I G K++
Sbjct: 35 AALVSPVLHASGMGKVDLVVITKSESSMALLR-----DGKILKQYRIAMGDLPAGHKLKE 89
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---- 146
GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 90 GDQRTPQGRYTLDYKK--PDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKS 147
Query: 147 ----------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N +M E++ +V +
Sbjct: 148 PLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEG 181
>gi|126730073|ref|ZP_01745885.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37]
gi|126709453|gb|EBA08507.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37]
Length = 165
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 32/152 (21%)
Query: 51 PTVIRIF--KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P V ++ K E L + + +LK Y + G K GD + PEG Y+I
Sbjct: 29 PEVTQVVVNKGERRLHLLHHD-----KVLKSYNVGLGFAPQGHKFIEGDGKTPEGNYFID 83
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE----------CASAGCY 153
NPNSK++LSI I +PN D+ + G D+ IHG+ +AGC
Sbjct: 84 RR--NPNSKFYLSIGISYPNPVDRMTAQELGKSPGGDIFIHGQGPNYRKGSPRDWTAGCI 141
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ +KQM++IYA+V+D IQ P
Sbjct: 142 AVTDKQMRDIYAMVQDGT--------PIQINP 165
>gi|241667037|ref|YP_002985121.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862494|gb|ACS60159.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M N++ IL + +++ + + + Q R IR++K E
Sbjct: 1 MRNKFVILAAVVVSLFA---YTKLMARIGAGSPPPDAPLEQQADR--------IRVYKTE 49
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
+ + K + + Y+I GPK GDE+ PEG Y I W NP S
Sbjct: 50 RRMVLLKGDTP-----ISTYRISLGQAADEGPKQREGDEKTPEGRYEIDWR--NPKSMAH 102
Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160
LS++I +P+ D+ + G ++MIHG + GC A+ N +M
Sbjct: 103 LSLHISYPDPDDRRNAEAGGFPPGGNIMIHGLPNGWGLFGNAHQLWDWTDGCIAVTNAEM 162
Query: 161 QEIYAIVRD 169
+EI+A V +
Sbjct: 163 REIWARVPN 171
>gi|86358120|ref|YP_470012.1| hypothetical protein RHE_CH02508 [Rhizobium etli CFN 42]
gi|86282222|gb|ABC91285.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 189
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201
M+HG C+S+GC+A+ ++ + EIYA+V +LRG Q Q+QA+PFRMT +N+ ++++PN
Sbjct: 1 MVHGACSSSGCFALTDQGVGEIYAVVEKALRGGQQ-AFQVQAYPFRMTPQNLAAHRDDPN 59
Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235
++FW LK G+D FE +EP + +++Y+F
Sbjct: 60 FAFWKNLKEGYDIFEVRRREPRVAACSRKYIFDA 93
>gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.]
Length = 337
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K E L + +N +LK YKI GPK GD + PEG Y+I + N
Sbjct: 202 ILIEKKERRLTLMSKN-----KVLKTYKIALGENPDGPKERQGDYKTPEGIYFID--SRN 254
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154
+ +Y LS++I +PNE DK + G D++IHG + GC A
Sbjct: 255 NSRRYHLSLHISYPNENDKKRAKALGISPGGDIVIHGIKNGFSWVGDLHTKFNWTKGCIA 314
Query: 155 MNNKQMQEIYAIVRDS 170
+ + +++EI +V +
Sbjct: 315 VTDDEIEEIDKLVPNG 330
>gi|311696719|gb|ADP99592.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15]
Length = 187
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 38/192 (19%)
Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72
+ + L+ KA+ + + + V+R K E L + +D
Sbjct: 15 CMAAAPTAVATELLAKADTRMPVATM--YEPAEIQNVSRVVVR--KGERRLYL----MDG 66
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
E +++ Y+I G K+ GDE+ PEG Y + W N S ++ SI+I +P+E D+
Sbjct: 67 E-DVVRSYRISLGDNPEGHKLYEGDERTPEGDYTLDWR--NAESDFYKSIHISYPSERDR 123
Query: 133 AHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDSLRG 173
G +MIHG + GC A+ N++M EI+ +V +
Sbjct: 124 ELASAWGLDPGGSIMIHGLPNNVGDMAFAYTGLDWTDGCIAVTNEEMDEIWQLVSNGT-- 181
Query: 174 NMQSHIQIQAFP 185
I P
Sbjct: 182 ------PISIHP 187
>gi|119385305|ref|YP_916361.1| hypothetical protein Pden_2578 [Paracoccus denitrificans PD1222]
gi|119375072|gb|ABL70665.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 171
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 40 SMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
S+Q +T P I + K + + + ++K YK+ + FGPK GD
Sbjct: 25 SLQPSKTYQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDG 79
Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHG-------- 145
+ PEG Y+I NP S+Y LS+ I +P+ D A R G D+ IHG
Sbjct: 80 RTPEGMYFID--RFNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRAL 137
Query: 146 --ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+AGC A+ +++++EI+ ++R + I +P
Sbjct: 138 NRADWTAGCIAVTDEEIEEIFTMLRPG--------VPIFIYP 171
>gi|78224670|ref|YP_386417.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
gi|78195925|gb|ABB33692.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
Length = 341
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 26/155 (16%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
E L ++ I I K + + + +LK Y+I GPK
Sbjct: 187 EALEKNVFAYAIRKPSLDKILIEKQARRMMLISKG-----AVLKTYRIALGGDPIGPKER 241
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIH----- 144
GD + PEG Y I N +S+Y +++I +PNE D+ R G ++MIH
Sbjct: 242 QGDNKTPEGAYTIDAR--NRDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNG 299
Query: 145 ---------GECASAGCYAMNNKQMQEIYAIVRDS 170
G + GC A+ +++++EI + +
Sbjct: 300 FSWVGDAHAGVDWTKGCIAVTDEEIEEIDTLAPNG 334
>gi|260576138|ref|ZP_05844131.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
gi|259021618|gb|EEW24921.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
Length = 165
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I++ K + + + +L++Y I G K GD + PEG Y I +
Sbjct: 33 TSIQVHKAARKMYLLHND-----KVLEQYDIALGFAPIGHKQFEGDGKTPEGAYQINFR- 86
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG---------ECASAGCYAMNN 157
NP+S Y LS+ I +P+E D+A TG D+ IHG +AGC A+ +
Sbjct: 87 -NPDSDYHLSLKISYPDENDRAFADEAGKPTGGDIFIHGHSNWKGRNKGDWTAGCIAVTD 145
Query: 158 KQMQEIYAIVRDS 170
++M+ IY++VR
Sbjct: 146 REMEVIYSMVRVG 158
>gi|253702667|ref|YP_003023856.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
gi|251777517|gb|ACT20098.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
Length = 331
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 33 LSENLIISMQKKRTSPFHPT----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
+ + I++ +++ + P PT I I K L + + ++K YKI
Sbjct: 171 VLQQEIVAQEEEVSPPAVPTGPADKILIEKKARRLTLLSKG-----EVIKSYKISLGENP 225
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMI 143
GPK GD + PEG Y I + N +S+Y LS++I +PNE DK + G ++MI
Sbjct: 226 NGPKERQGDNKTPEGIYRID--SRNNDSQYHLSLHISYPNEQDKRRAKQLGVSPGGNVMI 283
Query: 144 HGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
HG + GC A+ ++++QEI +V
Sbjct: 284 HGMRNGFSWFGEHHTSIDWTKGCIAVTDEEIQEIAELVPIG 324
>gi|93005670|ref|YP_580107.1| hypothetical protein Pcryo_0840 [Psychrobacter cryohalolentis K5]
gi|92393348|gb|ABE74623.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5]
Length = 187
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 38/185 (20%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
+ ++ F+L I + + + + + + N++I + + K+ L+
Sbjct: 15 FIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDK------------VFVDKSARTLQ 62
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ N ++K Y I G K + GD++ P G Y + + N SK++ SI++
Sbjct: 63 LLSDN-----KVIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYK--NEKSKFYRSIHV 115
Query: 125 GFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYA 165
+PN DKA + G D+MIHG+ + GC A+ + +M EI A
Sbjct: 116 SYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGCIAVTDNEMDEIMA 175
Query: 166 IVRDS 170
V
Sbjct: 176 AVEIG 180
>gi|120598543|ref|YP_963117.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
gi|146293378|ref|YP_001183802.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
gi|120558636|gb|ABM24563.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
gi|145565068|gb|ABP76003.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
gi|319426681|gb|ADV54755.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200]
Length = 171
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 34/152 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ I K+E+ + + + + +LK+Y+I G K++ GD++ P+G Y + +
Sbjct: 35 LVVITKSESNMALLR-----DGKVLKQYRIAMGDLPAGHKLKEGDQRTPQGRYILDYKK- 88
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
P+S Y+ SI+I +PNE DK + G +MIHG+ + GC
Sbjct: 89 -PDSAYYKSIHISYPNEEDKLRAKALGIKPGGMIMIHGQDPKSPLSPAQAQQFNWTNGCI 147
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ N +M E++ V + I+ +P
Sbjct: 148 ALTNAEMDELWKAVDEGT--------PIEIWP 171
>gi|85373228|ref|YP_457290.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594]
gi|84786311|gb|ABC62493.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594]
Length = 169
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 43/186 (23%)
Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R+ I L F+ C + + P+ + + K++
Sbjct: 2 IRFRIPALMLGLAFVASCAPTPQPVSVEAPPV------------------DFLLVDKSDR 43
Query: 62 ILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L +++ + ++ Y + G K GDE+ PEG Y I NPNS Y+L
Sbjct: 44 TLALYRDGAE-----VRRYTGLQFGDAPLGHKRFEGDERTPEGRYTIDTR--NPNSAYYL 96
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIY 164
S+ + +PN D+A+ G D+ +HG+ + GC A N +M E++
Sbjct: 97 SLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELW 156
Query: 165 AIVRDS 170
+VRD
Sbjct: 157 RLVRDG 162
>gi|120553064|ref|YP_957415.1| hypothetical protein Maqu_0121 [Marinobacter aquaeolei VT8]
gi|120322913|gb|ABM17228.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 185
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 30/189 (15%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R +LL I + L+ +A+ + + + ++ K E
Sbjct: 1 MIVR--VLLTIALIASPLLASASELLARADTRMMPSAPEPALMEGLLEITQVLVN--KGE 56
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L + + +++Y+I G K+ GDE+ PEG Y + W N +S ++
Sbjct: 57 RRLYLLSGDEP-----VRQYRISLGDNPVGHKLYEGDERTPEGDYVLDWR--NASSDFYK 109
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161
SI+I +P+ D+ G +MIHG + GC A++N+ M
Sbjct: 110 SIHISYPSPRDRELAEAWGLDPGGSIMIHGLPNNAGDMAFAYTGLDWTNGCIAVSNEAMD 169
Query: 162 EIYAIVRDS 170
EI+ +V++
Sbjct: 170 EIWQLVQNG 178
>gi|327192576|gb|EGE59525.1| hypothetical protein RHECNPAF_213007 [Rhizobium etli CNPAF512]
Length = 179
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 38/189 (20%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + +L A + + P++ + +IR++K+E
Sbjct: 1 MRTKIIVLAVATGSLFVYTKVMARIGSGSPPPVAPTEQRA-----------DLIRVYKSE 49
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
+ + + + + Y+I S GPK GDE+ PEG Y I W NP S
Sbjct: 50 RRMVLLRGDAP-----IATYQISLGSAADAGPKQREGDEKTPEGRYEIDWR--NPKSMAH 102
Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160
LS++I +PN ++ G +MIHG + GC A+ N +M
Sbjct: 103 LSLHISYPNPKERRAAEANGFPPGGSIMIHGLPNGWGLLGQAHRLWDWTDGCIAVTNTEM 162
Query: 161 QEIYAIVRD 169
+EI+A V D
Sbjct: 163 REIWARVPD 171
>gi|117921827|ref|YP_871019.1| hypothetical protein Shewana3_3390 [Shewanella sp. ANA-3]
gi|117614159|gb|ABK49613.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 157
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 26/159 (16%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+I+SM + ++++ K+E+ + + +D E ++KEY + + G K + G
Sbjct: 5 VILSMMISNLAFAEVDLVKVDKSESKMYL----LDGE-QVIKEYHVAFGANPKGHKQKEG 59
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE----- 146
DE+ PEG Y + + +S ++ +++I +PN D+A+ + G +M+HG+
Sbjct: 60 DEKTPEGSYTLDYKK--EDSSFYRAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLG 117
Query: 147 ---------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ GC A+ N +M E +V + +Q
Sbjct: 118 WLSFITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQ 156
>gi|294140531|ref|YP_003556509.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
gi|293327000|dbj|BAJ01731.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
Length = 185
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 44/207 (21%)
Query: 1 MTNRYNILLF---ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M+ + + LF A+ IF G S + ++ LS + ++++ K ++ +
Sbjct: 1 MSCYFPMRLFFSVAILIFFAGISLPVSAVSSMQNSLSSSTLVNIGKID-------LVVVT 53
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K+ + + + + +L+ Y I G K + GD++ PEG Y + + +S
Sbjct: 54 KSTSSMALMRNG-----KVLRRYHIALGDRPRGHKTQEGDQRTPEGRYTLDYKKF--DSA 106
Query: 118 YFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCYAMNNK 158
Y+ +I+I +PNE D+ + G +MIHG+ + GC A+ N
Sbjct: 107 YYRAIHISYPNEEDRLRASALGIQPGGQIMIHGQNPRSSLSAEEAQKYNWTDGCIAITNP 166
Query: 159 QMQEIYAIVRDSLRGNMQSHIQIQAFP 185
QM E++ + + I+ P
Sbjct: 167 QMDELWRAIDEGT--------PIEILP 185
>gi|262403345|ref|ZP_06079905.1| hypothetical protein VOA_001335 [Vibrio sp. RC586]
gi|262350844|gb|EEY99977.1| hypothetical protein VOA_001335 [Vibrio sp. RC586]
Length = 160
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y++ + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 77 IDDSSFYRSIHISYPNARDQQLAQLRGVNPGGDIKIHGLKNSDEREPAFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q I IQ
Sbjct: 137 AITNQEMDEFLSLV--------QPGIPIQI 158
>gi|126665583|ref|ZP_01736565.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17]
gi|126630211|gb|EBA00827.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17]
Length = 187
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
LF L L ++L L T + + K E L++
Sbjct: 6 LFVLCSLLLTLLTPQALASDLLARADTRLPFPHSSDIDQLPSITKVLVQKGERSLQLLSG 65
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
++++Y+I G K+ GD + PEG Y + W N S ++ SI+I +P+
Sbjct: 66 E-----QVIRQYRISLGDNPLGHKLYEGDSRTPEGEYSLDWR--NAGSSFYKSIHISYPS 118
Query: 129 EFDKAHNR-----TGADLMIHGEC---------------ASAGCYAMNNKQMQEIYAIVR 168
D+ G +MIHG + GC A++N+++ EI+ +V
Sbjct: 119 AKDREMAENWGLNPGGSIMIHGLPNGTDDDFAFAFFGLDWTDGCIAVSNQEIDEIWQLVS 178
Query: 169 DSLRGNMQSHIQIQAFP 185
D I+ P
Sbjct: 179 DGT--------PIEILP 187
>gi|310817141|ref|YP_003965105.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
gi|308755876|gb|ADO43805.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
Length = 142
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 29/152 (19%)
Query: 47 SPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P P + +K L + + +++ Y G K GD + PEG Y
Sbjct: 5 DPNTPVTHLLAYKGNRSLYLMANDT-----VVRSYNFGLGFQPVGHKQFEGDGKTPEGIY 59
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGC 152
+ NP S Y LS+ I +PN D+ + + G D+ IHG + GC
Sbjct: 60 TMDRR--NPRSAYHLSVGISYPNLADREYAKQYNRSPGGDIFIHGTPQRFVGAGDWTVGC 117
Query: 153 YAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184
A+ N +++EIY +V R I F
Sbjct: 118 MAVTNAEVEEIYRLVPLGAR--------IHIF 141
>gi|148266084|ref|YP_001232790.1| hypothetical protein Gura_4074 [Geobacter uraniireducens Rf4]
gi|146399584|gb|ABQ28217.1| Uncharacterized protein-like protein [Geobacter uraniireducens Rf4]
Length = 171
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+E ++++ K E ++K Y+I G K + GD++ PEG Y + N
Sbjct: 36 VVVIKSERVMKLLK-----EGTVVKSYEIALGKEPVGAKAQKGDKKTPEGTYILDRR--N 88
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154
NSK++ SI++ +PN D + + G D+MIHG + GC A
Sbjct: 89 SNSKFYRSIHVSYPNRSDLENAQKYGVSPGGDIMIHGLPKGLERVGELHTLINWTKGCIA 148
Query: 155 MNNKQMQEIYAIVRDSLRGNMQS 177
+ N QM EI+ +V +Q
Sbjct: 149 VTNAQMDEIWQMVPVGTPIEIQP 171
>gi|297579707|ref|ZP_06941634.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535353|gb|EFH74187.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 194
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|254225243|ref|ZP_04918856.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622342|gb|EAZ50663.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 194
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNSDEREPSFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|327485387|gb|AEA79793.1| Uncharacterized protein conserved in bacteria [Vibrio cholerae
LMA3894-4]
Length = 187
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 51 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 103
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 104 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 163
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 164 AITNQEMDEFLSLV--------QPGVPIHI 185
>gi|83950747|ref|ZP_00959480.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83838646|gb|EAP77942.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 161
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 42/180 (23%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
++ + L+GC S P +++++ K + +
Sbjct: 2 LMVALIGAVALSGC---SSKFKTYNGPEVTHVLVN-----------------KGARRMYL 41
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
N +LK Y I G K GD + PEG Y I NPNS + LSI +
Sbjct: 42 LHHN-----QVLKAYDIDLGFAPEGHKQFQGDGKTPEGRYVIDRR--NPNSDFHLSIGLD 94
Query: 126 FPNEFDKAHN-----RTGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170
+PN D+A+ G D+ IHG +AGC ++ ++++++IYA+V++
Sbjct: 95 YPNMRDRAYALAQGKTPGGDIFIHGRPNTKKKGNGPDWTAGCISVKDREIEDIYAMVKNG 154
>gi|325123406|gb|ADY82929.1| hypothetical protein BDGL_002343 [Acinetobacter calcoaceticus
PHEA-2]
Length = 193
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 34 SENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
S + + + + P I +FKN+ +L + K N D ++++Y I G K
Sbjct: 33 SHQALSNEEIQEIIKTKPVTSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHK 87
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG-- 145
D + PEG Y I W N S Y+ S++I +P+ D A+ + TG D+MIHG
Sbjct: 88 HFENDGRTPEGIYSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSV 145
Query: 146 ----------------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ + GC A+ N + EI+ +V + + I +P
Sbjct: 146 PKSLLSMPFSSTYMPHKDWTLGCIAVRNVDIDEIWQLVPNHTK--------IIIYP 193
>gi|126734435|ref|ZP_01750182.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
gi|126717301|gb|EBA14165.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
Length = 121
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
LL YKI G K++ GD + PEG Y + NPNS + LS+ I +P+ D A
Sbjct: 8 TLLSSYKIDLGFAPVGHKVQEGDGRTPEGGYRVDRR--NPNSSFHLSLGISYPDANDIAS 65
Query: 135 NR-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
R G D+ IHG + GC A+ N QM E+YA+V
Sbjct: 66 ARAKGVNPGGDIFIHGTPAVWERTPDWTWGCIAVTNDQMDEVYAMVNTG 114
>gi|153816794|ref|ZP_01969461.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227811790|ref|YP_002811800.1| hypothetical protein VCM66_A0162 [Vibrio cholerae M66-2]
gi|229506670|ref|ZP_04396179.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286]
gi|298500021|ref|ZP_07009827.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126512597|gb|EAZ75191.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227010932|gb|ACP07143.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229357021|gb|EEO21939.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286]
gi|297542002|gb|EFH78053.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 194
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|153214388|ref|ZP_01949359.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115337|gb|EAY34157.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 194
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|87200697|ref|YP_497954.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
gi|87136378|gb|ABD27120.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
Length = 167
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY-KICAWSGTFGPKIET 95
+ S P +R+ K+ L + +DA+ L+ + I G K
Sbjct: 16 VQASASANEIRPEDIASVRVEKSARRLLL----LDADGATLRSFSNIQLGDAPLGHKRFE 71
Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--- 147
GDE+ PEG Y I + N S Y LS++I +P+ D+A+ G + IHG+
Sbjct: 72 GDERTPEGRYVID--HGNARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSL 129
Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A++N ++ EI+A+V D
Sbjct: 130 ASGRIEGDWTDGCIALSNAEIDEIWALVGDG 160
>gi|167623553|ref|YP_001673847.1| hypothetical protein Shal_1622 [Shewanella halifaxensis HAW-EB4]
gi|167353575|gb|ABZ76188.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 169
Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 34/159 (21%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
+ ++ + K+E + + ++ + K+Y+I G K+ GD++ PEG Y
Sbjct: 26 MANGKADLVIVTKSEASMTLLRQG-----KVFKKYRIAMGDNPVGHKLTEGDQRTPEGRY 80
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-------------- 146
+ + +S Y+ +I+I +PN+ D+ G +MIHGE
Sbjct: 81 LLDYKK--SDSAYYRAIHISYPNDEDRLRADALGISPGGQIMIHGENPNSSLSPEEAQMY 138
Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ + + I+ +P
Sbjct: 139 NWTDGCIAVTNAEMDELWRAIDEGT--------PIEIWP 169
>gi|257454799|ref|ZP_05620050.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
gi|257447732|gb|EEV22724.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
Length = 185
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 32/184 (17%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
++LFA FL G ++ M + + + + K+ I+++
Sbjct: 8 LVILFAWLYFL-GLPKPEKIVKANNSDKPT-----MNYLAQNKIYADKVYVKKSARIMQL 61
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
N +++EY I G K + GDE+ PEG+Y + W N S + S+++
Sbjct: 62 LHNNS-----VIREYNIALGDNPKGHKQQEGDERTPEGWYTLDWA--NEQSAAYRSLHVS 114
Query: 126 FPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAI 166
+PN D+A+ + G +MIHG+ + GC A+ N +M EI +
Sbjct: 115 YPNSKDRANAKMLGVSPGGAIMIHGQMNGTELLTAFNQKRDWTNGCIAVTNSEMDEIMTL 174
Query: 167 VRDS 170
V+
Sbjct: 175 VKVG 178
>gi|189499065|ref|YP_001958535.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides
BS1]
gi|189494506|gb|ACE03054.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides
BS1]
Length = 192
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 34/147 (23%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K E +L ++ + +K Y+I G K+ GD + PEG Y I NP S
Sbjct: 61 KGERLLHLY-----SGGAAVKSYRIALGFNPVGAKLRQGDGKTPEGRYSIS--ERNPQSS 113
Query: 118 YFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNK 158
Y LS+ I +P+ D+ G D+ IHG + GC A+ N
Sbjct: 114 YHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGCIAVTND 173
Query: 159 QMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+++E++ V + +P
Sbjct: 174 EIEELWKAVPVGT--------PVIIYP 192
>gi|293611082|ref|ZP_06693381.1| predicted protein [Acinetobacter sp. SH024]
gi|292826734|gb|EFF85100.1| predicted protein [Acinetobacter sp. SH024]
Length = 178
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 34 SENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
S + + + + P I +FKN+ +L + K N D ++++Y I G K
Sbjct: 18 SHQALSNEEIQEIIKTKPVTSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHK 72
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG-- 145
D + PEG Y I W N S Y+ S++I +P+ D A+ + TG D+MIHG
Sbjct: 73 HFENDGRTPEGIYSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSV 130
Query: 146 ----------------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ + GC A+ N + EI+ +V + + I +P
Sbjct: 131 PKSLLSMPFSSTYMPHKDWTLGCIAVRNVDIDEIWQLVPNHTK--------IIIYP 178
>gi|229526209|ref|ZP_04415613.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis
VL426]
gi|229527855|ref|ZP_04417246.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)]
gi|229334217|gb|EEN99702.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)]
gi|229336367|gb|EEO01385.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis
VL426]
Length = 160
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 137 AITNQEMDEFLSLV--------QPGVPIHI 158
>gi|85707820|ref|ZP_01038886.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1]
gi|85689354|gb|EAQ29357.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1]
Length = 193
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 25/172 (14%)
Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVDAEY 74
G + + + P + I K+E +L ++
Sbjct: 22 GGTAQQAAATSSFPTQIVPAATRGNASRSIPSRPPVADYLLIDKSERLLVAYQNGRP--- 78
Query: 75 VLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
+K Y+ + G K GDE+ PEG Y I NP S++ LS+ I +PN D+A
Sbjct: 79 --IKAYRGLQFGDTPMGHKRFEGDERTPEGLYTIDTR--NPQSRFHLSLRISYPNRQDRA 134
Query: 134 HN-----RTGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170
G D+ IHG+ + GC A++N +++E++ +V D
Sbjct: 135 FAAQYGRSPGGDIFIHGQPTGRPGRMRGDWTDGCIALSNTEIEELWQLVPDG 186
>gi|157961382|ref|YP_001501416.1| hypothetical protein Spea_1556 [Shewanella pealeana ATCC 700345]
gi|157846382|gb|ABV86881.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345]
Length = 171
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99
+ + ++ + K+E + I ++ +LK+Y+I G K+ GD++
Sbjct: 22 ATFASAMASGKADLVVVTKSEASMAILRQG-----KVLKKYRIAMGDNPVGHKLTEGDQR 76
Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-------- 146
PEG Y + + +S Y+ +I+I +PN+ DK G +MIHGE
Sbjct: 77 TPEGRYILDYKK--SDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTP 134
Query: 147 ------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N +M E++ +
Sbjct: 135 EEAQMYNWTDGCIAITNAEMDELWRAIEPG 164
>gi|121587991|ref|ZP_01677744.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121547789|gb|EAX57878.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
Length = 197
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N ++ EY+I G K + GD++ PEG Y + + +
Sbjct: 61 LVKVDKSKRRMYLLQGN-----EVISEYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 113
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 114 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 173
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 174 AITNQEMDEFLSLV--------QPGVPIHI 195
>gi|227821108|ref|YP_002825078.1| lipoprotein, putative [Sinorhizobium fredii NGR234]
gi|227340107|gb|ACP24325.1| lipoprotein, putative [Sinorhizobium fredii NGR234]
Length = 200
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 26/135 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K +L++++ LL+E+ I G K++ GD + PEG Y + W N
Sbjct: 65 VVVHKERRVLQLFQGE-----RLLREFPIALGGNPVGDKLQEGDRRTPEGLYVLDWR--N 117
Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYA 154
S ++ S+++ +P D G +MIHG+ + GC A
Sbjct: 118 DASSFYRSMHVSYPAPEDVQAAAAKVVDPGGMIMIHGQPNYLGWLAFLTQMFDWTDGCIA 177
Query: 155 MNNKQMQEIYAIVRD 169
+ N +M EI+ +V +
Sbjct: 178 VTNAEMDEIWDMVPN 192
>gi|147672199|ref|YP_001215949.1| hypothetical protein VC0395_1113 [Vibrio cholerae O395]
gi|262167801|ref|ZP_06035502.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27]
gi|146314582|gb|ABQ19122.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014791|gb|ACP11000.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262023709|gb|EEY42409.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27]
Length = 160
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 137 AITNQEMDEFLSLV--------QPGVPIHI 158
>gi|153830346|ref|ZP_01983013.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148874189|gb|EDL72324.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 194
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|121728201|ref|ZP_01681235.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|254286657|ref|ZP_04961612.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|121629524|gb|EAX61948.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|150423241|gb|EDN15187.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 194
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 171 AITNQEMDEFLSLV--------QPGVPIHI 192
>gi|312962870|ref|ZP_07777357.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6]
gi|311282897|gb|EFQ61491.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6]
Length = 167
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 48/187 (25%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F L+ ++L K + + K+ +
Sbjct: 2 RWLLALICLSFATLSPASTPQTLGGKTVEK---------------------VLVLKSAHQ 40
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ + K Y+I G K+ GD + PEG Y+I W + ++ L++
Sbjct: 41 LQL-----INDGKPFKTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWRKT--SDRFNLAM 93
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G+ +MIHG + GC M N M+E+
Sbjct: 94 HISYPNISDAARARREGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMREV 153
Query: 164 YAIVRDS 170
+ +V+D
Sbjct: 154 WNLVKDG 160
>gi|24373740|ref|NP_717783.1| hypothetical protein SO_2183 [Shewanella oneidensis MR-1]
gi|24348116|gb|AAN55227.1|AE015660_7 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 171
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 39/172 (22%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
+S ++ S + ++ I K+E+ + + + + +LK+Y+I G K
Sbjct: 20 ISPQVLASSGIGKVD-----LVVITKSESNMALLR-----DGKVLKQYRIAMGDLPTGHK 69
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146
+ GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 70 LTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 127
Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ V + I+ +P
Sbjct: 128 PRSPLPPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 171
>gi|113970547|ref|YP_734340.1| hypothetical protein Shewmr4_2210 [Shewanella sp. MR-4]
gi|113885231|gb|ABI39283.1| conserved hypothetical protein [Shewanella sp. MR-4]
Length = 171
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 39/183 (21%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
+ ++ +S ++ S + ++ I K+E+ + + + + +LK+Y+
Sbjct: 9 TITVAMTVAALISPQVLASSGIGKVD-----LVVITKSESNMALLR-----DGKILKQYR 58
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----R 136
I G K+ GD++ P+G Y + + +S Y+ SI+I +PNE DK R
Sbjct: 59 IAMGDLPTGHKLTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLRAKALGIR 116
Query: 137 TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182
G +MIHG+ + GC A+ N +M E++ V + I+
Sbjct: 117 PGGMIMIHGQNPRSPLSPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIE 168
Query: 183 AFP 185
+P
Sbjct: 169 IWP 171
>gi|114562765|ref|YP_750278.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
400]
gi|114334058|gb|ABI71440.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
400]
Length = 167
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 36/171 (21%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S +L ++ + T+ V+ K+E+ L + + + ++K Y I G K+
Sbjct: 14 SPSLAVASSSQTTAKVDLVVVN--KSESRLSVMR-----DGRVVKSYLIAMGDVPSGHKL 66
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-- 146
+ GD++ P+G Y + + +S ++ SI+I +PNE DK R G +MIHGE
Sbjct: 67 KEGDQRTPQGRYVLDYKK--SDSAFYKSIHISYPNEEDKLRADALGIRAGGMIMIHGENP 124
Query: 147 ------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ NK+M E++ ++ I+ +P
Sbjct: 125 RSTLPPEEAQKYNWTNGCIAVTNKEMDELWQMIDAGT--------PIEIWP 167
>gi|229592409|ref|YP_002874528.1| hypothetical protein PFLU5023 [Pseudomonas fluorescens SBW25]
gi|229364275|emb|CAY52000.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 167
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 48/187 (25%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + L L F+ L+ +L K + + K+ +
Sbjct: 2 RWLLALICLSFVTLSSASTVETLGGKTVEK---------------------VLVLKSAHQ 40
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
L++ + K Y+I G K+ GD + PEG Y+I W + ++ L++
Sbjct: 41 LQL-----INDGKPFKTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWRKTSE--RFNLAM 93
Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163
+I +PN D A R G+ +MIHG + GC M N M+E+
Sbjct: 94 HISYPNISDAARARREGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMREV 153
Query: 164 YAIVRDS 170
+ +V+D
Sbjct: 154 WTLVKDG 160
>gi|209546383|ref|YP_002278273.1| hypothetical protein Rleg2_6003 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539240|gb|ACI59173.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 41/185 (22%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
I++ +LF + S + PL++ IR++K+E +
Sbjct: 8 LAIVIVSLFTYTKLMARIGSGSPPPDAPLAQQADS--------------IRVYKSERRMV 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
+ K +V + Y+I GPK GDE+ PEG Y I W NP S LS++
Sbjct: 54 LLKGDVP-----ISTYRISLGKAADAGPKQREGDEKTPEGHYEIDWR--NPKSMAHLSLH 106
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIY 164
I +P+ D+ + G ++MIHG + GC A+ N +M++I+
Sbjct: 107 ISYPSPDDQRNAAAGSFPPGGNIMIHGLPNGWGLFRQAHRLWDWTDGCIAVTNAEMRDIW 166
Query: 165 AIVRD 169
A V D
Sbjct: 167 ARVPD 171
>gi|114047782|ref|YP_738332.1| hypothetical protein Shewmr7_2287 [Shewanella sp. MR-7]
gi|113889224|gb|ABI43275.1| conserved hypothetical protein [Shewanella sp. MR-7]
Length = 171
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 39/172 (22%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
+S ++ S + ++ I K+E+ + + + + +LK+Y+I G K
Sbjct: 20 ISPQVLASSGIGKVD-----LVVITKSESNMALLR-----DGKILKQYRIAMGDLPTGHK 69
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146
+ GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 70 LTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 127
Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ V + I+ +P
Sbjct: 128 PRSPLSPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 171
>gi|117920863|ref|YP_870055.1| hypothetical protein Shewana3_2420 [Shewanella sp. ANA-3]
gi|117613195|gb|ABK48649.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 186
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 39/172 (22%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
+S ++ S + ++ I K+E+ + + + + +LK+Y+I G K
Sbjct: 35 ISPQVLASSGIGKVD-----LVVITKSESNMALLR-----DGKILKQYRIAMGDLPTGHK 84
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146
+ GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+
Sbjct: 85 LTEGDQRTPQGRYILDYKK--SDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 142
Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N +M E++ V + I+ +P
Sbjct: 143 PRSPLTPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 186
>gi|257459222|ref|ZP_05624341.1| protein erfk [Campylobacter gracilis RM3268]
gi|257443607|gb|EEV18731.1| protein erfk [Campylobacter gracilis RM3268]
Length = 186
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 38/199 (19%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-IRIFKNENILEIW 66
+L L I G + +L + + E + + K+ IR++K++ ILEI
Sbjct: 5 ILLPLIIIAAG--LAWALDNYLSYKNIETINSEIPLKQALDGEQISKIRVYKSKRILEIL 62
Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
+ K YKI G K GD + PEG Y I N NPNS Y L++ I +
Sbjct: 63 TSKG-----VAKSYKIALGREPEGHKEVQGDGKTPEGNYTI--NGKNPNSAYHLNLGISY 115
Query: 127 PNEFDKAHNRT-----GADLMIHGEC---------------ASAGCYAMNNKQMQEIYAI 166
PN+ D AH ++ G D+ IHG + GC A+ N M E++
Sbjct: 116 PNKADVAHAKSLGKSAGGDIKIHGLPNKFSYLGQSIAAFGDWTEGCIALVNDDMDELFEH 175
Query: 167 VRDSLRGNMQSHIQIQAFP 185
V+ I+ P
Sbjct: 176 VKIGT--------PIEILP 186
>gi|222055904|ref|YP_002538266.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221565193|gb|ACM21165.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 174
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 38/185 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65
+LL + I + L PL ++ + I K L +
Sbjct: 3 KLLLAFVLIIIGSVAVIWMLGKPESKPLPAGVVAD------------RVLIEKGPRRLTL 50
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+++ LK Y++ G K E GD + PEG Y I +S+Y +++I
Sbjct: 51 FRQGKR-----LKTYEVALGRNPQGKKTEEGDCRTPEGIYTIDRRK--QSSRYHRALHIS 103
Query: 126 FPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAI 166
+P+ D A + G D+MIHG + GC A+ N ++EI+ +
Sbjct: 104 YPSSADVAQAKARSVSPGGDVMIHGLPNALGFVGKVHLIRDWTLGCVAVTNPDIEEIWRV 163
Query: 167 VRDSL 171
V D +
Sbjct: 164 VPDGV 168
>gi|241760216|ref|ZP_04758312.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114]
gi|241319327|gb|EER55792.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114]
Length = 182
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIR--IFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
P+ ++ + P + R + K++ + + + LLK Y I
Sbjct: 22 APIRSTTTVTTPSETPLPEDAVIDRLVVHKSKRTMSAYSQG-----RLLKTYPISLGKQP 76
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMI 143
G K GD + PEG Y I N NPNS Y ++ + +PNE DKA+ G + I
Sbjct: 77 VGHKQFEGDGKTPEGKYRI--NERNPNSGYHKNLGVSYPNEADKAYAAAQGKSPGGLIKI 134
Query: 144 HG--------------ECASAGCYAMNNKQMQEIYAIVR 168
HG + + GC A+ ++++ E+Y V+
Sbjct: 135 HGMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYRSVK 173
>gi|94970797|ref|YP_592845.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
gi|94552847|gb|ABF42771.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
Length = 174
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K+ + + +++ + L+ +YK+ GPK GD + PEG Y+I N
Sbjct: 39 IVIEKSAHRMALYRSGL-----LVHQYKVSLGGQPVGPKTRQGDHRTPEGQYFI--EGRN 91
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154
+S Y+ S+ I +PN D R G D+MIHG + GC A
Sbjct: 92 EHSHYYKSLRISYPNATDLQRAREQKVSPGGDIMIHGLPNGERFIGKLHLLHDWTEGCIA 151
Query: 155 MNNKQMQEIYAIVRDS 170
+ +++M EI+A+VR
Sbjct: 152 VTDEEMDEIWALVRVG 167
>gi|119775248|ref|YP_927988.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
gi|119767748|gb|ABM00319.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
Length = 165
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 39 ISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97
S+Q P ++ + K E ++++ R L+K Y+I G K++ GD
Sbjct: 14 ASVQANAIKPGQKVDLVVVNKAEAQMQVFYRG-----ELIKSYRIAMGDNPKGHKLKEGD 68
Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------ 146
++ P+G Y + + +S Y+ SI+I +PN+ D + G +MIHG+
Sbjct: 69 QRTPQGRYLLDFKK--ADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPL 126
Query: 147 --------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N+ M E++ ++
Sbjct: 127 SAEEAQKYNWTNGCIAVTNRDMDELWQLIDPG 158
>gi|153802363|ref|ZP_01956949.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124122082|gb|EAY40825.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 194
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D+ + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ N++M E ++V+ +
Sbjct: 171 AITNQEMDEFLSLVQPGV 188
>gi|229522834|ref|ZP_04412248.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80]
gi|229340051|gb|EEO05059.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80]
Length = 160
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 34/150 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
A+ N++M E ++V Q + I
Sbjct: 137 AITNQEMDEFLSLV--------QPGVPIHI 158
>gi|218672529|ref|ZP_03522198.1| hypothetical protein RetlG_13267 [Rhizobium etli GR56]
Length = 179
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 32/160 (20%)
Query: 35 ENLIISMQKKRTSPFHPT-----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-T 88
++ + SP P +IR++K+E + + + + + Y+I
Sbjct: 19 TKVMARIGSGSPSPDAPLEQRADLIRVYKSERRMVLLRADAP-----IATYRISLGRAAD 73
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMI 143
GPK GDE+ PEG Y I W NP S LS++I +P ++ + G ++MI
Sbjct: 74 AGPKQREGDEKTPEGRYEIDWR--NPKSMAHLSLHISYPKPEEQRAAQVNGFPPGGNIMI 131
Query: 144 HGEC--------------ASAGCYAMNNKQMQEIYAIVRD 169
HG + GC A+ N +M++I+A V D
Sbjct: 132 HGLPNGWGLLGDVHRLLDWTDGCIAVTNAEMRDIWARVPD 171
>gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5]
gi|68342764|gb|AAY90370.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 167
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 46/186 (24%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R+ + L + + C S ++ + + E +++ +
Sbjct: 2 RWLLALLCCSV-VAVCQ--ASTVETLDGKVIEKVLVLKSAHQLQLI-------------- 44
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
LK Y+I GPK+ GD++ PEG Y++ W + +Y L+++
Sbjct: 45 --------NGGKPLKTYRISLGKKPKGPKLMEGDKRTPEGLYWLDWRKT--SDRYNLAMH 94
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIY 164
I +PN D A +R G +MIHG + GC AM N M+E++
Sbjct: 95 ISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFHTLDWTDGCIAMRNVDMREVW 154
Query: 165 AIVRDS 170
+V+D
Sbjct: 155 GLVKDG 160
>gi|119382801|ref|YP_913857.1| hypothetical protein Pden_0044 [Paracoccus denitrificans PD1222]
gi|119372568|gb|ABL68161.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 188
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNL 112
I + K + + + + + +LK Y+I S G K GDE+ PEG Y I W
Sbjct: 48 IVVSKGDKTMYLLRGD-----RILKTYRIAMGSNWNQGHKQREGDERTPEGTYRIDWR-- 100
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153
NP S LS+++ +PN D R G ++MIHG + GC
Sbjct: 101 NPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAMGRLHRLLDWTDGCI 160
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N +M+EI+++ +
Sbjct: 161 AVTNDEMREIWSLTPNG 177
>gi|260777335|ref|ZP_05886229.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607001|gb|EEX33275.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 154
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + ++KE++I G K + GD + PEG YY+ + +
Sbjct: 18 LVKVDKSKRRMYLIDNG-----QVVKEFRIALGKHPKGHKTQEGDHRTPEGRYYLDF--V 70
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
NS+++ SI+I +PN D A+ G D+ IHG + GC
Sbjct: 71 IDNSEFYRSIHISYPNPRDIAYAAKLRVDPGGDIKIHGLRNGEKRPAKFVQSFDWTNGCI 130
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E+ +V+
Sbjct: 131 AITNEEMDELLTLVKTG 147
>gi|114762228|ref|ZP_01441696.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis
HTCC2601]
gi|114545252|gb|EAU48255.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601]
Length = 133
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 27/121 (22%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
+LK Y I G K GD + PEG Y+I NPNS + LS+ I +PN D+A
Sbjct: 8 KVLKSYDIGLGFQPQGHKQFEGDGKTPEGLYFIDRR--NPNSSFHLSLGISYPNPNDRAF 65
Query: 135 N-----RTGADLMIHGEC--------------------ASAGCYAMNNKQMQEIYAIVRD 169
G D+ IHG + GC A+++ Q++ IYA+V+
Sbjct: 66 AAAAGKSPGGDIFIHGGPPKDRKRLGGGDWMTKGNSVDWTWGCIAVSDDQIEHIYAMVKT 125
Query: 170 S 170
Sbjct: 126 G 126
>gi|259415196|ref|ZP_05739118.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B]
gi|259349106|gb|EEW60860.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B]
Length = 186
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + K+ L + ++ ++ Y I + G K GDE+ PEG Y I W N
Sbjct: 49 ILVIKSTRALHLLRQGET-----IRSYDISLGAAPEGHKQSEGDERTPEGRYKIDWR--N 101
Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------------ASAGCYA 154
PNS LS++I +PN A G ++MIHG + GC A
Sbjct: 102 PNSVAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMRDWTDGCIA 161
Query: 155 MNNKQMQEIYAIVRDS 170
+ N +M+EI+++V +
Sbjct: 162 VTNAEMREIWSLVPNG 177
>gi|99078481|ref|YP_611739.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040]
gi|99035619|gb|ABF62477.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040]
Length = 186
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + K+ L + + + ++ Y I + G K GDE+ PEG Y I W N
Sbjct: 49 ILVIKSTRALHLLR-----DGETIRSYDISLGAAPEGHKQSEGDERTPEGRYEIDWR--N 101
Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------------ASAGCYA 154
PNS LS++I +PN A G ++MIHG + GC A
Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161
Query: 155 MNNKQMQEIYAIVRDS 170
+ N +M+EI+++V D
Sbjct: 162 VTNAEMREIWSLVPDG 177
>gi|262281096|ref|ZP_06058878.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257327|gb|EEY76063.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus
RUH2202]
Length = 181
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 38/157 (24%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I +FKN+ IL + K N D +++ Y I G K D + PEG Y I W
Sbjct: 40 TSIEVFKNQRIL-LLKSNQD----VIRRYPIRLGFNPEGHKHFENDGKTPEGVYSIDWR- 93
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG------------------ECA 148
N S Y+ S++I +P+ D A+ + TG D+MIHG +
Sbjct: 94 -NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSVPKSLISMPFSSTYMPHKDW 152
Query: 149 SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N + EI+ V + + I +P
Sbjct: 153 TLGCIAVRNADIDEIWQFVPNHTK--------IIIYP 181
>gi|206889453|ref|YP_002248809.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741391|gb|ACI20448.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 160
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 34/152 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K++ + + K E ++K YK+ G K+ GD + PEG YYI
Sbjct: 24 LVVVIKSKRAMFLMK-----EGKIVKAYKVALGKTPVGKKVSQGDGKTPEGRYYII--GR 76
Query: 113 NPNSKYFLSINIGFPNEFD-----KAHNRTGADLMIHG--------------ECASAGCY 153
NPNS ++ ++ I +PNE D K H G +MIHG + + GC
Sbjct: 77 NPNSNFYKALKISYPNEQDIEQAIKLHVNPGGGIMIHGLSKHVEYLGKYHIIDDWTEGCI 136
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ N++M EI+ +V D I+ P
Sbjct: 137 AVTNEEMDEIWKLVPDGT--------PIEILP 160
>gi|254505691|ref|ZP_05117837.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
gi|219551344|gb|EED28323.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
Length = 159
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 26/134 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + +++EY++ G K + GD++ PEG YY+ + +
Sbjct: 23 LVKVDKSKRRMYLMDGK-----EVVREYRVALGQSPKGHKRQEGDQKTPEGRYYLDF--V 75
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S+Y+ SI+I +PN D+ + R G D+ IHG + GC
Sbjct: 76 IEDSQYYKSIHISYPNLRDRTYARVHNLDPGGDIKIHGLKNGERRPANYVQSFDWTDGCI 135
Query: 154 AMNNKQMQEIYAIV 167
A+ N++M E+ ++V
Sbjct: 136 AITNQEMDELLSLV 149
>gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153822669|ref|ZP_01975336.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254850432|ref|ZP_05239782.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|9657554|gb|AAF96077.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126519826|gb|EAZ77049.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254846137|gb|EET24551.1| conserved hypothetical protein [Vibrio cholerae MO10]
Length = 194
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 58 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 110
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 111 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 170
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ N++M E ++V+ +
Sbjct: 171 AITNQEMDEFLSLVQPGV 188
>gi|323499297|ref|ZP_08104274.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326]
gi|323315685|gb|EGA68719.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326]
Length = 159
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ L + +D + +++EY+I G K + GD++ PEG YY+ + +
Sbjct: 23 LVKVDKSKRRLYL----LDGQ-QVVREYRIALGKSPKGHKQQEGDQKTPEGRYYLDF--V 75
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S+++ SI+I +PN D+ G D+ IHG + GC
Sbjct: 76 LNDSQFYRSIHISYPNLKDRTQAMSNKVDPGGDIKIHGLKNGETRPANYVQSFDWTDGCI 135
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M ++ ++V
Sbjct: 136 ALTNQEMDDLLSLVSTG 152
>gi|299768812|ref|YP_003730838.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1]
gi|298698900|gb|ADI89465.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1]
Length = 193
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 38/208 (18%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R I+ L + L + P + L T I +FK++
Sbjct: 1 MKIRPIIICTLLIVPLGITFYKYEKYLPTFTPSHQALSREEISDLIKTKPVTSIEVFKSQ 60
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
IL + K N D +++ Y I G K D + PEG Y I W N S ++
Sbjct: 61 RIL-LLKSNQD----VIRRYPIRLGLNPKGHKHFENDGKTPEGIYSIDWR--NSQSVFYK 113
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHG------------------ECASAGCYAMNN 157
S++I +P+ D A+ + TG D+MIHG + + GC A+ N
Sbjct: 114 SLHISYPDMKDIAYAKQHNQPTGGDIMIHGSVPKSFLSMPFSSTYMPHKDWTLGCIAVRN 173
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ EI+ V + + I +P
Sbjct: 174 TDIDEIWQFVPNHTK--------IIIYP 193
>gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100]
gi|39575740|emb|CAE79907.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 204
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 29/188 (15%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI---RIFKNENI 62
+ LFA F G + + ++ ++ + RI +++
Sbjct: 10 ALSLFATNSFAAGSKALDKSFRYCQDISQVDKLLDRSRESVDRLQAEELKVERIVVSKDR 69
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
E++ + + LLK Y + G K GD + PEG Y I + NP S+Y ++
Sbjct: 70 KELYLISGE---TLLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDYK--NPQSQYTKAL 124
Query: 123 NIGFPNEFD----KAHNRT-GADLMIHGEC----------------ASAGCYAMNNKQMQ 161
++ +PN+ D KA ++ G D+MIHG + GC A+ N +++
Sbjct: 125 HVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQGCVAVTNPEIE 184
Query: 162 EIYAIVRD 169
EIY++V++
Sbjct: 185 EIYSLVKE 192
>gi|127512419|ref|YP_001093616.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
gi|126637714|gb|ABO23357.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
Length = 194
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101
++ ++ + K+E + + ++ +L+ YKI G K++ GD++ P
Sbjct: 47 STSKSQIGKVDLVVVNKSEASMLLMRQG-----KVLRRYKIALGDRPVGHKLQEGDQRTP 101
Query: 102 EGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE---------- 146
EG Y + + +S Y+ +I+I +PN+ DK G +MIHG+
Sbjct: 102 EGRYILDYKK--ADSAYYRAIHISYPNDEDKLRAAALGINPGGQIMIHGQNPNSSLTPDE 159
Query: 147 ----CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ N+++ E++ V I+ +P
Sbjct: 160 AQRLNWTDGCIAIKNEEIDELWRAVDTGT--------PIEIWP 194
>gi|153825032|ref|ZP_01977699.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2]
gi|149741357|gb|EDM55391.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2]
Length = 160
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNSDEREPGFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ N++M E ++V+ +
Sbjct: 137 AITNQEMDEFLSLVQPGV 154
>gi|170727112|ref|YP_001761138.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
gi|169812459|gb|ACA87043.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
Length = 179
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 34/152 (22%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+E + + + ++++Y+I G K++ GD++ PEG Y + +
Sbjct: 43 LVVVTKSEAKMVLMRNG-----KVMRQYRIAMGDRPKGHKLKEGDQRTPEGRYILDYKK- 96
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S Y+ +I+I +PN+ DK + G +MIHG+ + GC
Sbjct: 97 -SDSAYYRAIHISYPNDEDKLRAKALGISPGGQIMIHGQNPNSSLTPEEAQKFNWTDGCI 155
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
A+ N+QM E++ G+++ I+ +P
Sbjct: 156 AITNRQMDELW--------GSIEPGTPIEIWP 179
>gi|229510533|ref|ZP_04400013.1| hypothetical protein VCE_001941 [Vibrio cholerae B33]
gi|229517335|ref|ZP_04406780.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9]
gi|229605146|ref|YP_002875850.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236]
gi|255746022|ref|ZP_05419969.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101]
gi|262162139|ref|ZP_06031154.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1]
gi|229345371|gb|EEO10344.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9]
gi|229352978|gb|EEO17918.1| hypothetical protein VCE_001941 [Vibrio cholerae B33]
gi|229371632|gb|ACQ62054.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236]
gi|255735776|gb|EET91174.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101]
gi|262028214|gb|EEY46872.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1]
Length = 160
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ N++M E ++V+ +
Sbjct: 137 AITNQEMDEFLSLVQPGV 154
>gi|229514664|ref|ZP_04404125.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21]
gi|229348644|gb|EEO13602.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21]
Length = 160
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + N +++EY+I G K + GD++ PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDF--I 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PN D + G D+ IHG + GC
Sbjct: 77 IEDSSFYRSIHISYPNTRDHQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDSL 171
A+ N++M E ++V+ +
Sbjct: 137 AITNQEMDEFLSLVQPGV 154
>gi|260769479|ref|ZP_05878412.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972]
gi|260614817|gb|EEX40003.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972]
Length = 159
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + +++E++I G K + GD++ PEG YY+ + +
Sbjct: 23 LVKVDKSKRRMYLID-----DGHVIREFRIALGKAPKGHKQQEGDQRTPEGRYYLDF--I 75
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +PN D+ H G ++ IHG + GC
Sbjct: 76 TEHSNFYRSMHISYPNLRDQRHAESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCI 135
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQ 176
A+ N++M E +V+ +Q
Sbjct: 136 AITNQEMDEFLRLVKIGTPIEIQ 158
>gi|119945545|ref|YP_943225.1| hypothetical protein Ping_1849 [Psychromonas ingrahamii 37]
gi|119864149|gb|ABM03626.1| conserved hypothetical protein [Psychromonas ingrahamii 37]
Length = 166
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K++ + + K+ V+ +EY I G K + GD++ PEG Y I + N
Sbjct: 31 VVVEKSKRKMYLIKQG-----VVYREYPIALGYRPIGHKGKEGDKRTPEGRYIIDYR--N 83
Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYA 154
P S+++LS++I +P+E D G ++ IHG+ + GC A
Sbjct: 84 PESRFYLSLHINYPSEKDLQSAADNNVSPGGEIFIHGQPNNTKHHPSKFRGRDWTDGCIA 143
Query: 155 MNNKQMQEIYAIVRDS 170
+ N+ +++ + +V+D
Sbjct: 144 ITNQDIKQFWTLVKDG 159
>gi|258624844|ref|ZP_05719772.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262173004|ref|ZP_06040681.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451]
gi|258582842|gb|EEW07663.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|261890362|gb|EEY36349.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451]
Length = 160
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S L++ + S ++++ K++ + + + N +++EY+I G K
Sbjct: 5 STVLVLLLFFPNFSFAQIDLVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQ 59
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-- 146
+ GD++ PEG Y++ + + S ++ SI+I +PN+ D+ + G D+ IHG
Sbjct: 60 QEGDQRTPEGHYFLDF--VTQESHFYRSIHISYPNQQDEQYAALLGVSPGGDIKIHGLKN 117
Query: 147 ------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ GC A+ N +M E ++V N++
Sbjct: 118 GETADPAFIQSFDWTNGCIALTNLEMDEFLSLVLPGTPINIE 159
>gi|301167780|emb|CBW27364.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 171
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 33/146 (22%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+ + K+ ++E+ +D + +++ Y + GPK++ GD + PEG Y I W
Sbjct: 25 VRVEVRKSNRVMEL----IDHKGEVIRTYDVMLGQSPIGPKVQRGDNKTPEGKYKINWR- 79
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------------------- 147
NP S YFLS++I +PN+ D+ ++R G ++ IHG
Sbjct: 80 -NPKSSYFLSLHISYPNKEDRQNSRDLGVDPGDNIFIHGLPNKIQRLSSFERRIAESILL 138
Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A++NK MQEI+ +V +
Sbjct: 139 STDWTNGCIAVSNKDMQEIWDLVPNG 164
>gi|237751635|ref|ZP_04582115.1| ERFK [Helicobacter bilis ATCC 43879]
gi|229373001|gb|EEO23392.1| ERFK [Helicobacter bilis ATCC 43879]
Length = 174
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 39/182 (21%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
+LLF + L + + LS ++ I + K + ILE++
Sbjct: 1 MLLFCILTLLYQISIATERGQEYPIDLSLKGRVAK------------IVVHKQKRILELY 48
Query: 67 KRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
D + LLK Y I G K GD + PEG YYI NP S+YFL++ I
Sbjct: 49 ----DDKNKLLKSYPHIALGKNPQGHKEFEGDSKTPEGLYYIDSK--NPKSRYFLNLGIS 102
Query: 126 FPNEFDKAHNR-----TGADLMIHGEC---------------ASAGCYAMNNKQMQEIYA 165
+PN+ D A+ + G D+ IHG + GC A++N M+E+Y
Sbjct: 103 YPNKLDIANAKKHNKNAGGDIKIHGLPNGMNIAKELFKQYGDWTDGCIALDNASMKELYE 162
Query: 166 IV 167
++
Sbjct: 163 VI 164
>gi|258622323|ref|ZP_05717349.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585647|gb|EEW10370.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 160
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S L++ + S ++++ K++ + + + N +++EY+I G K
Sbjct: 5 STVLVLLLFFPNFSFAQIDLVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQ 59
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-- 146
+ GD++ PEG Y++ + + S ++ SI+I +PN+ D+ + G D+ IHG
Sbjct: 60 QEGDQRTPEGHYFLDF--VTQESHFYRSIHISYPNQQDERYAALLGVSPGGDIKIHGLKN 117
Query: 147 ------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ GC A+ N +M E ++V N++
Sbjct: 118 GETADPAFIQSFDWTNGCIALTNLEMDEFLSLVLPGTPINIE 159
>gi|315182009|gb|ADT88922.1| hypothetical protein vfu_B00702 [Vibrio furnissii NCTC 11218]
Length = 159
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + +++E++I G K + GD++ PEG YY+ + +
Sbjct: 23 LVKVDKSKRRMYLID-----DGHVIREFRIALGKSPKGHKQQEGDQRTPEGRYYLDF--I 75
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +PN D+ H G ++ IHG + GC
Sbjct: 76 TEHSNFYRSMHISYPNLRDQRHAESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCI 135
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQ 176
A+ N++M E +V+ +Q
Sbjct: 136 AITNQEMDEFLRLVKIGTPIEIQ 158
>gi|254466238|ref|ZP_05079649.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
gi|206687146|gb|EDZ47628.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I]
Length = 175
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 33/174 (18%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
+FL G + A P+ + R I I K+ L + E
Sbjct: 11 VFLTGAAW-MAWQAFAPRPVPPQATAVDRIDR--------ILIEKSARRL---TASRGGE 58
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
VL E+ I G KI+ GD + PEG + I NPNS Y LS+ I +P D+A
Sbjct: 59 TVL--EFPIALGFEPAGDKIQEGDGKTPEGTFRIDRR--NPNSAYHLSLGIDYPQPGDRA 114
Query: 134 HNR-----TGADLMIHGEC------------ASAGCYAMNNKQMQEIYAIVRDS 170
R G D+ IHG+ +AGC A++N QM+ ++ +
Sbjct: 115 RARAAGVSPGGDIFIHGQPNSLGTLITLPGDWTAGCIAVSNDQMETLWRLAEIG 168
>gi|116255215|ref|YP_771048.1| hypothetical protein pRL110015 [Rhizobium leguminosarum bv. viciae
3841]
gi|115259863|emb|CAK02957.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 165
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNN 111
+IR++K E + + K + + Y+I GPK GDE+ PEG Y I W
Sbjct: 28 LIRVYKAERRMILLKGDTP-----ISTYRISLGQAADEGPKQREGDEKTPEGRYEIDWR- 81
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGC 152
NP S LS++I +P D+ + G ++MIHG + GC
Sbjct: 82 -NPKSMAHLSLHISYPGSDDRRNADAGGFPPGGNIMIHGLPNGWGLFGNAHQLWDWTDGC 140
Query: 153 YAMNNKQMQEIYAIVRD 169
A+ N +M++I+A V +
Sbjct: 141 IAVTNSEMRDIWARVPN 157
>gi|163751492|ref|ZP_02158715.1| hypothetical protein KT99_14104 [Shewanella benthica KT99]
gi|161328613|gb|EDP99763.1| hypothetical protein KT99_14104 [Shewanella benthica KT99]
Length = 127
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 29/132 (21%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132
+ +L+ Y I G K++ GD++ PEG Y + + +S Y+ +I+I +PNE D+
Sbjct: 6 DGKVLRRYHIALGDRPLGHKLQEGDQRTPEGRYTLDYKK--SDSAYYRAIHISYPNEEDQ 63
Query: 133 AHNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRG 173
R G +MIHG+ + GC A+ N QM E++ + +
Sbjct: 64 LRARALGIQPGGQIMIHGQNPRSSLSAAEAQQYNWTDGCIAITNPQMDELWRAIDEGT-- 121
Query: 174 NMQSHIQIQAFP 185
I+ P
Sbjct: 122 ------PIEILP 127
>gi|157374959|ref|YP_001473559.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
gi|157317333|gb|ABV36431.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
Length = 179
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 37/191 (19%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL C SL A ++ S TS ++ + K+++ + + +
Sbjct: 7 FFLLACTIGFSLQSVA---VTSLQSASYSSSNTSIGKIDLVVVDKSQSSMALMRNGQT-- 61
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133
L++Y+I G K+ GD++ PEG Y + + +S Y+ +I+I +PNE D
Sbjct: 62 ---LRKYRIAMGDRPVGHKVTEGDQRTPEGRYLLDYKK--SDSAYYRAIHISYPNEEDSL 116
Query: 134 HNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRGN 174
+ G +MIHG+ + GC A+ N QM E++ + +
Sbjct: 117 RAKALGLDPGGQIMIHGQNPNSSLSPEEAQRFNWTDGCIAITNAQMDELWRAIDEGT--- 173
Query: 175 MQSHIQIQAFP 185
I+ +P
Sbjct: 174 -----PIEIWP 179
>gi|167644675|ref|YP_001682338.1| hypothetical protein Caul_0707 [Caulobacter sp. K31]
gi|167347105|gb|ABZ69840.1| conserved hypothetical protein-like protein [Caulobacter sp. K31]
Length = 178
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 69/200 (34%), Gaps = 53/200 (26%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LL +L + C P + I I K + +
Sbjct: 13 RAALLGSLCAGIAACT----------RPAPAPAVE---------GSVDHILIEKAAHRMT 53
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124
+ + L+ Y+I G PK GD + PEG Y I NP S Y LS+ I
Sbjct: 54 LLAGHRP-----LRTYRISLGRGGLAPKAREGDGRTPEGDYRI--AGRNPKSAYHLSLRI 106
Query: 125 GFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYA 165
G+P A R G D+MIHG + GC A+ + +++EI+
Sbjct: 107 GYPTPAQTADARGRGVDPGGDIMIHGLPNGRGALARYYAGRDWTDGCVAVTDAEVEEIWR 166
Query: 166 IVRDSLRGNMQSHIQIQAFP 185
+ +D R + P
Sbjct: 167 LTQDDAR--------VHIAP 178
>gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100]
gi|39574683|emb|CAE78525.1| unnamed protein product [Bdellovibrio bacteriovorus HD100]
Length = 220
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 26/136 (19%)
Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114
RI +++ +++ + D LL+ Y + G K GD + PEG Y I + NP
Sbjct: 77 RIVVSKDKRQLYLVSGD---TLLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK--NP 131
Query: 115 NSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCY 153
S++ S+++ +PN+ D A+ + G D+MIHG + GC
Sbjct: 132 KSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLGCI 191
Query: 154 AMNNKQMQEIYAIVRD 169
A+ NK+++EIYA+V++
Sbjct: 192 AVTNKEIEEIYALVKE 207
>gi|29654462|ref|NP_820154.1| putative lipoprotein [Coxiella burnetii RSA 493]
gi|153211349|ref|ZP_01947691.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154707148|ref|YP_001424614.1| hypothetical protein CBUD_1254 [Coxiella burnetii Dugway 5J108-111]
gi|161830363|ref|YP_001597027.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|212218590|ref|YP_002305377.1| hypothetical protein CbuK_1024 [Coxiella burnetii CbuK_Q154]
gi|29541729|gb|AAO90668.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|120575062|gb|EAX31686.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154356434|gb|ABS77896.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
gi|161762230|gb|ABX77872.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|212012852|gb|ACJ20232.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 233
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 5 YNILLFALFIFLNGCHHS-----RSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFK 58
+ ILL F HH S I K +NL ++ S P + +FK
Sbjct: 15 FTILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPYFKRAGVSYPPKDISLLVFK 74
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
N + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++
Sbjct: 75 NSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPASRF 131
Query: 119 FLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
LS+ + +PN D+ + R G D+ IHG AS GC + NK +++++ +
Sbjct: 132 DLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA----Y 187
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNP-NYS-FWNMLKLG 211
+ HI++ P + +P + ++
Sbjct: 188 LVGERHIKVIIAPDDLRYHAPIYGAVHPRWLPQLYAQIRQA 228
>gi|190895329|ref|YP_001985621.1| hypothetical protein RHECIAT_PA0000012 [Rhizobium etli CIAT 652]
gi|190699274|gb|ACE93358.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 173
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W
Sbjct: 36 LIRVYKSERRMVLLKGDAP-----IAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWR- 89
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGC 152
N S LS++I +P ++ G ++MIHG + GC
Sbjct: 90 -NAKSTEHLSLHISYPKPEEQRAAEVNGFPAGGNIMIHGLPNGWGLLGKAHRLWDWTDGC 148
Query: 153 YAMNNKQMQEIYAIVRD 169
A+ N +M++I+A V D
Sbjct: 149 IAVTNAEMRDIWARVPD 165
>gi|114769815|ref|ZP_01447425.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255]
gi|114549520|gb|EAU52402.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255]
Length = 169
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 43/184 (23%)
Query: 5 YNILLFALFIFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+NILLF FIF +GC +S ++ I P ++++ K++
Sbjct: 4 FNILLFMAFIF-SGCFNSSTVYKSIPNYNGPKITKIVVN-----------------KSQR 45
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L ++ + +++++K+ K + GD + PEG Y+I N NSKYFLS
Sbjct: 46 KLFLFHND-----KIIRKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLS 98
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAI 166
+ I +PN DK + + G D+ IHG +AGC ++++K M+ IY++
Sbjct: 99 LGISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSM 158
Query: 167 VRDS 170
V+
Sbjct: 159 VKAG 162
>gi|262275516|ref|ZP_06053326.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886]
gi|262220761|gb|EEY72076.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886]
Length = 139
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K+ + + + + ++K Y I + G K+ GD++ PEG Y + + +
Sbjct: 3 LVKVDKSARKMYLIQGD-----RIVKRYHISLGANPKGHKLREGDQRTPEGHYLLDF--I 55
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
N S+++ SI I +PNE D + G +MIHG+ + GC
Sbjct: 56 NEKSRFYRSIRINYPNENDVKRAQKLGVNPGGQIMIHGQKNNNDSLPGSGRSKDWTDGCI 115
Query: 154 AMNNKQMQEIYAIVR 168
A+ N+++ E +V+
Sbjct: 116 AITNEEIDEFLRLVK 130
>gi|212212447|ref|YP_002303383.1| hypothetical protein CbuG_0852 [Coxiella burnetii CbuG_Q212]
gi|212010857|gb|ACJ18238.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 233
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 5 YNILLFALFIFLNGCHHS-----RSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFK 58
+ ILL F HH S I K +NL ++ S P + +FK
Sbjct: 15 FTILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPCFKRAGVSYPPKDISLLVFK 74
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
N + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++
Sbjct: 75 NSHRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIV--GFNPASRF 131
Query: 119 FLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
LS+ + +PN D+ + R G ++ IHG AS GC + NK +++++ +
Sbjct: 132 DLSLMLNYPNSADRYYARLDHRHDLGDNIFIHGSDASIGCIPIGNKAIEQLFVLA----Y 187
Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNP-NYS-FWNMLKLG 211
+ HI++ P + +P + ++
Sbjct: 188 LVGERHIKVIIAPDDLRYHAPIYGAVHPRWLPQLYAQIRQA 228
>gi|161170313|gb|ABX59283.1| uncharacterized protein conserved in bacteria [uncultured marine
bacterium EB000_55B11]
Length = 190
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 43/184 (23%)
Query: 5 YNILLFALFIFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
+NILLF FIF +GC +S ++ I P ++++ K++
Sbjct: 25 FNILLFMAFIF-SGCFNSSTVYKSIPNYNGPKITKIVVN-----------------KSQR 66
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L ++ + +++++K+ K + GD + PEG Y+I N NSKYFLS
Sbjct: 67 KLFLFHND-----KIIRKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLS 119
Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAI 166
+ I +PN DK + + G D+ IHG +AGC ++++K M+ IY++
Sbjct: 120 LGISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSM 179
Query: 167 VRDS 170
V+
Sbjct: 180 VKAG 183
>gi|291279132|ref|YP_003495967.1| hypothetical protein DEFDS_0732 [Deferribacter desulfuricans SSM1]
gi|290753834|dbj|BAI80211.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 168
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ + K+++ + + K +LK + I G K + GDE+ PEG Y++ +
Sbjct: 32 YVLVKKSKHKIYLLKSG-----KILKSFHIALGGNPKGAKQKQGDEKTPEGIYFLDYK-- 84
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
N S+Y+ SI+I +PN D + G D+MIHG+ + GC
Sbjct: 85 NERSRYYKSIHISYPNTSDVKRAKKMGVSPGGDIMIHGQKKGWGWLSFISQKFDWTKGCI 144
Query: 154 AMNNKQMQEIYAIVRDS 170
A++NK M I+ +V+
Sbjct: 145 AVSNKDMDVIWKMVKVG 161
>gi|27367809|ref|NP_763336.1| hypothetical protein VV2_1455 [Vibrio vulnificus CMCP6]
gi|27359382|gb|AAO08326.1|AE016813_78 Uncharacterized protein conserved in bacteria [Vibrio vulnificus
CMCP6]
Length = 161
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+++ K++ L + +++EY+I G K++ GD++ PEG Y + + +
Sbjct: 26 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 78
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154
S ++ S++I +PN D + G D+ +HG + GC A
Sbjct: 79 EESAFYRSVHISYPNPIDSLLAKEKGLSPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 138
Query: 155 MNNKQMQEIYAIVRDS 170
+ N++M E +V+
Sbjct: 139 LTNQEMDEFIRLVKMG 154
>gi|37675934|ref|NP_936330.1| hypothetical protein VVA0274 [Vibrio vulnificus YJ016]
gi|37200474|dbj|BAC96300.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
YJ016]
Length = 161
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+++ K++ L + +++EY+I G K++ GD++ PEG Y + + +
Sbjct: 26 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 78
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154
S ++ S++I +PN D + G D+ +HG + GC A
Sbjct: 79 EESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 138
Query: 155 MNNKQMQEIYAIVRDS 170
+ N++M E +V+
Sbjct: 139 LTNQEMDEFIRLVKMG 154
>gi|320158079|ref|YP_004190457.1| hypothetical protein VVM_00523 [Vibrio vulnificus MO6-24/O]
gi|319933391|gb|ADV88254.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
MO6-24/O]
Length = 160
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+++ K++ L + +++EY+I G K++ GD++ PEG Y + + +
Sbjct: 25 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 77
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154
S ++ S++I +PN D + G D+ +HG + GC A
Sbjct: 78 EESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 137
Query: 155 MNNKQMQEIYAIVRDS 170
+ N++M E +V+
Sbjct: 138 LTNQEMDEFIRLVKMG 153
>gi|261414486|ref|YP_003248169.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370942|gb|ACX73687.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326024|gb|ADL25225.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 174
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 29/153 (18%)
Query: 40 SMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
+ + P I + K + + + ++K YKI G K+++GD
Sbjct: 22 EKESPKVMLTSPVDNILVEKAKRQMHLRSGEN-----IVKTYKISLGKNPVGAKVKSGDN 76
Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG-------- 145
+ PEG Y I NP S + LS+ + +PN + G D+MIHG
Sbjct: 77 KTPEGNYTI--ERHNPKSIFHLSLKVSYPNAEQIKAAKEGNYEPGGDIMIHGYPNKIPAF 134
Query: 146 --------ECASAGCYAMNNKQMQEIYAIVRDS 170
+ +AGC A+ N +++EIY V+D
Sbjct: 135 LFKFWHKWKDWTAGCIAVTNDEIEEIYDAVKDG 167
>gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H]
gi|71146873|gb|AAZ27346.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H]
Length = 171
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+++I K+E + + + +KEY + G K + GDE+ PEG Y + +
Sbjct: 35 LVKIDKSERRMYLLENGKT-----IKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYKK- 88
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ +++I +PN+ D + + G +MIHG+ + GC
Sbjct: 89 -EDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGCI 147
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQ 176
A+ N +M + ++V+ + +++
Sbjct: 148 ALTNSEMDQFMSLVKVGTKIHIE 170
>gi|149909260|ref|ZP_01897917.1| lipoprotein, putative [Moritella sp. PE36]
gi|149807784|gb|EDM67730.1| lipoprotein, putative [Moritella sp. PE36]
Length = 162
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+I+S+ + + + K++ L +++ N L+K Y+I G K + G
Sbjct: 11 VILSLNSYASQLLQADYVLVKKSDRTLFLFRNN-----QLIKSYRISLGKNPIGAKTQRG 65
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC---- 147
D++ PEG Y I + N SKY LS++I +PN+ DK + G + IHG
Sbjct: 66 DKKTPEGLYNIDFK--NRQSKYHLSLHITYPNKRDKERSFERNLNPGDSIYIHGLPNKNK 123
Query: 148 ---------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A++N +++I V D IQ P
Sbjct: 124 NAGLLIGSDWTNGCIAVSNNAIRDIAKYVPDGT--------PIQITP 162
>gi|310780465|ref|YP_003968797.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
gi|309749788|gb|ADO84449.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926]
Length = 164
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K+ + + N ++K Y I G K ++GD + PEG Y + +
Sbjct: 33 LVKVDKSSKKMFLMSGN-----QVIKIYDISLGIDPIGHKGKSGDNKTPEGIYTLDYK-- 85
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------ASAGCYAMNNKQ 159
N S Y+ SI+I +PNE DKA G D+ IHG+ + GC + N++
Sbjct: 86 NSQSIYYKSIHISYPNEKDKAAAAQKGWDPGGDITIHGQKKGSLSKEEWTEGCIGVTNEE 145
Query: 160 MQEIYAIVR 168
M EI+ +++
Sbjct: 146 MDEIWELLQ 154
>gi|326389097|ref|ZP_08210679.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
gi|326206697|gb|EGD57532.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
Length = 174
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ I K L + +DAE ++ Y I GPK GD + PEG Y I W
Sbjct: 41 VLIEKGARRLTL----LDAEGGAVRVYDHIRLGWEPVGPKRFEGDGRTPEGHYRIDWGL- 95
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNN 157
+S Y LS++I +P D+A+ R G + IHG +AGC A++N
Sbjct: 96 -ESSAYHLSLHISYPGPSDQAYARSRGRSPGGAIFIHGWPNGARDAPEGDWTAGCIALDN 154
Query: 158 KQMQEIYAIVRDS 170
+++EI+ +V D
Sbjct: 155 AEIEEIWGLVGDG 167
>gi|153834888|ref|ZP_01987555.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01]
gi|148868659|gb|EDL67741.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01]
Length = 160
Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + ++KEY+I + G K E GD + PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLMDNG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDY--V 76
Query: 113 NPNSKYFLSINIGFPNEFDK--AHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D+ AH R G + IHG + GC
Sbjct: 77 INDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V+
Sbjct: 137 AITNEEMDEFIRLVKMG 153
>gi|323493533|ref|ZP_08098655.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546]
gi|323312356|gb|EGA65498.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546]
Length = 158
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I++ K++ + + + N ++KE++I G KI GD++ PEG Y++ + +
Sbjct: 22 LIKVDKSKRRMYLIENN-----EVVKEFRIALGKRPKGHKIHEGDQRTPEGRYFLDF--V 74
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S+++ SI+I +PN D A+ G ++ IHG + GC
Sbjct: 75 LEDSEFYRSIHISYPNAQDMAYAMNRNLDPGGNIKIHGLKNGETRPANYVQSFDWTDGCI 134
Query: 154 AMNNKQMQEIYAIVRDS 170
A++N++M ++ +V
Sbjct: 135 AISNQEMDQLLQLVEVG 151
>gi|269961393|ref|ZP_06175758.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833944|gb|EEZ88038.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 168
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + ++KEY+I + G K E GD + PEG Y + + +
Sbjct: 32 LVKVDKSKRRMYLMENG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDY--V 84
Query: 113 NPNSKYFLSINIGFPNEFDK--AHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D+ AH R G ++ IHG + GC
Sbjct: 85 INDSAFYRSVHISYPDAIDRLEAHRRGVSPGGEIKIHGLKNGETQSPQFIQSFDWTNGCI 144
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V+
Sbjct: 145 AITNEEMDEFIKLVKMG 161
>gi|91793728|ref|YP_563379.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
gi|91715730|gb|ABE55656.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
Length = 181
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+ + + I + + +K Y I G K++ GD++ P+G Y++ +
Sbjct: 45 LVVVNKSASRMSIIR-----DGKTIKSYLIAMGDAPNGHKLKEGDQRTPQGRYFLDYKK- 98
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S ++ SI+I +PNE DK G +MIHGE + GC
Sbjct: 99 -SDSAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPKSTLPPEEAQKYNWTNGCI 157
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ NK+M E++ ++
Sbjct: 158 AVTNKEMDELWRMIEPG 174
>gi|91228120|ref|ZP_01262162.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01]
gi|91188238|gb|EAS74538.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01]
Length = 160
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + ++ +LKEY+I + G K E GD + PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLMEQG-----AVLKEYRIALGANPQGHKQEEGDNRTPEGEYTLDY--V 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D + G ++ IHG + GC
Sbjct: 77 IEDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V
Sbjct: 137 AITNEEMDEFIQLVEMG 153
>gi|329120497|ref|ZP_08249162.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327461955|gb|EGF08285.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 235
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 34/173 (19%)
Query: 33 LSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
LS +Q+ P + + K+ ++ + D LLK Y + G
Sbjct: 77 LSPRRQTLLQQPALPPDTEIAKLVVRKSAREMDAY----DHSGRLLKTYPVALGRAPVGH 132
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN----EFDKAHNR-TGADLMIHG- 145
K GD + PEG Y I NP+S Y ++ + +PN A R G D+ IHG
Sbjct: 133 KQFEGDGKTPEGRYTIS--GRNPHSGYHKNLGVSYPNRADRARAAAQGRSPGGDIKIHGL 190
Query: 146 -------------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ ++++ E+YA+V + + I P
Sbjct: 191 KNGLGAIGAQHLRRDWTDGCIAVTDREIDELYALV--------EPNAPIDILP 235
>gi|254227859|ref|ZP_04921289.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25]
gi|262396152|ref|YP_003288005.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25]
gi|151939355|gb|EDN58183.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25]
gi|262339746|gb|ACY53540.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25]
Length = 153
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + ++ +LKEY+I + G K E GD + PEG Y + + +
Sbjct: 17 LVKVDKSKRRMYLMEQGT-----ILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDY--V 69
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D + G ++ IHG + GC
Sbjct: 70 IEDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCI 129
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V
Sbjct: 130 AITNEEMDEFIQLVEMG 146
>gi|170727585|ref|YP_001761611.1| hypothetical protein Swoo_3246 [Shewanella woodyi ATCC 51908]
gi|169812932|gb|ACA87516.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 160
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K+E+ + + ++KEY + + G K++ GDE+ PEG Y + +
Sbjct: 24 LVKVDKSESKMYLLDSG-----QIVKEYDVAFGANPKGHKVQEGDEKTPEGTYTLDYKK- 77
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S ++ +++I +PN+ D + G +M+HG+ + GC
Sbjct: 78 -EDSSFYRAMHISYPNKQDIENAAKRGVSPGGFIMVHGQRNWLGWFAPITQSFNWTNGCI 136
Query: 154 AMNNKQMQEIYAIV 167
A++N +M E +V
Sbjct: 137 ALSNSEMDEFMDLV 150
>gi|156977970|ref|YP_001448876.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116]
gi|156529564|gb|ABU74649.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116]
Length = 146
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + ++KEY+I + G K E GD + PEG Y + + +
Sbjct: 10 LVKVDKSKRRMYLMDNG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVY--V 62
Query: 113 NPNSKYFLSINIGFPNEFDK--AHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D+ AH R G + IHG + GC
Sbjct: 63 INDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 122
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQ 176
A+ N++M E +V+ N++
Sbjct: 123 AITNEEMDEFIRLVKMGTPINIE 145
>gi|163803216|ref|ZP_02197097.1| hypothetical protein 1103602000599_AND4_11960 [Vibrio sp. AND4]
gi|159172971|gb|EDP57807.1| hypothetical protein AND4_11960 [Vibrio sp. AND4]
Length = 160
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + ++KE++I S G K E GD + PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLIENG-----EVVKEFRIALGSNPKGHKQEEGDNRTPEGDYTLNY--V 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153
NS ++ S++I +P+ D+ + G + IHG + GC
Sbjct: 77 INNSAFYRSVHISYPDAIDRLEAQRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V+
Sbjct: 137 AITNQEMDEFIRLVQMG 153
>gi|149188458|ref|ZP_01866751.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1]
gi|148837676|gb|EDL54620.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1]
Length = 167
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ + K+ + + + +++EY+I G KI+ GD + PEG YY+ + +
Sbjct: 32 VEVKKSARRMYLMDGDT-----VIREYRIALGKNPRGHKIQEGDNRTPEGKYYLDF--VM 84
Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154
+S ++ S++I +PN DK + G ++ IHG + GC A
Sbjct: 85 DDSAFYRSMHISYPNLRDKNRAKSLGVAPGGNIKIHGLKNNNTKPPQFVQSFDWTNGCIA 144
Query: 155 MNNKQMQEIYAIVRDS 170
+ N +M E+ ++V+
Sbjct: 145 ITNDEMDELVSLVKIG 160
>gi|119713560|gb|ABL97612.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured marine bacterium
EB0_39F01]
Length = 160
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 42/177 (23%)
Query: 12 LFIFLNGCHHSRSL---IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
+ +GC +S ++ I P ++++ K++ L ++
Sbjct: 1 MAFIFSGCFNSSTVYKSIPNYNGPKITKIVVN-----------------KSQRKLFLFHN 43
Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128
+ ++K++K+ K + GD + PEG Y+I N NSKYFLS+ I +PN
Sbjct: 44 D-----KIIKKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLSLGISYPN 96
Query: 129 EFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170
DK + + G D+ IHG +AGC ++++K M+ IY++V+
Sbjct: 97 TEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSMVKAG 153
>gi|119383401|ref|YP_914457.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
gi|119373168|gb|ABL68761.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
PD1222]
Length = 209
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 29/157 (18%)
Query: 36 NLIISMQKKRTSPFHPT-----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
L Q+ P P I + K+ + +++ + + ++I G
Sbjct: 53 TLPPIFQRPPVQPEAPIASPVRRILVEKSARRMTVYQESGPP-----RTFRIALGFSPEG 107
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG 145
K GD + PEG + I LN S Y LS+ I +P + + R G D+MIHG
Sbjct: 108 DKSREGDGRTPEGIFRID--RLNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHG 165
Query: 146 EC------------ASAGCYAMNNKQMQEIYAIVRDS 170
+ +AGC A++N +++EI+A R
Sbjct: 166 QPNQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHARIG 202
>gi|239831254|ref|ZP_04679583.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG
3301]
gi|239823521|gb|EEQ95089.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG
3301]
Length = 224
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 45/205 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + + + I L G + I AE PL+ IR+ K
Sbjct: 45 MFKKTLFAVVLIAIALFGYTKVMARISLAEPPLAAPSEQQADA----------IRVEKAN 94
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFG-PKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
+ + + + + Y+I S G K GDE+ PEG Y I W NP S
Sbjct: 95 RQMTLLR-----DGRTIGTYRISLGSNGDGGHKQREGDEKTPEGHYVIDWR--NPRSMAH 147
Query: 120 LSINIGFPNEFDKA-----HNRTGADLMIHGEC--------------ASAGCYAMNNKQM 160
LS++I +PNE DK + G ++MIHG + GC A+ + +M
Sbjct: 148 LSLHISYPNENDKQAAAAAGHAPGGNIMIHGLPNGWGWLKSAHRLWDWTDGCIAVTDAEM 207
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFP 185
++I+A V I+ P
Sbjct: 208 RDIWARVPTGT--------PIEILP 224
>gi|254452444|ref|ZP_05065881.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
gi|198266850|gb|EDY91120.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
Length = 162
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 40/178 (22%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
NR A L C S P ++++ K
Sbjct: 2 NRRIFTSAAALFALTAC---SSEFRVYTGPAVTSVVVQ-----------------KGRRK 41
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+ ++ N +L++Y G K GD + PEG Y+I NPNS ++LSI
Sbjct: 42 MFLFHNN-----EVLEQYDFELGFAPTGHKEVEGDGRTPEGAYFIDRK--NPNSSFYLSI 94
Query: 123 NIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167
I +PN G D+ IHG +AGC A+ +++M++IYA+V
Sbjct: 95 GISYPNAADRARARAMGKSPGGDIFIHGTPRASLNRDDWTAGCLAVKDREMEDIYAMV 152
>gi|260362135|ref|ZP_05775130.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
gi|260896320|ref|ZP_05904816.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
Peru-466]
gi|308094839|ref|ZP_05892934.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
AN-5034]
gi|308126143|ref|ZP_05908130.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
gi|308085138|gb|EFO34833.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
Peru-466]
gi|308091743|gb|EFO41438.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
AN-5034]
gi|308110411|gb|EFO47951.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
gi|308114649|gb|EFO52189.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
gi|328469985|gb|EGF40896.1| hypothetical protein VP10329_04277 [Vibrio parahaemolyticus 10329]
Length = 160
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + + ++LKEY+I + G K E GD + PEG Y + + +
Sbjct: 24 LVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--V 76
Query: 113 NPNSKYFLSINIGFPNEFD--KAHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D +AH R G ++ IHG + GC
Sbjct: 77 IEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 136
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V
Sbjct: 137 ALTNEEMDEFIQLVTMG 153
>gi|153838809|ref|ZP_01991476.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810]
gi|149747789|gb|EDM58683.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810]
Length = 148
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + + ++LKEY+I + G K E GD + PEG Y + + +
Sbjct: 12 LVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--V 64
Query: 113 NPNSKYFLSINIGFPNEFD--KAHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D +AH R G ++ IHG + GC
Sbjct: 65 IEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 124
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V
Sbjct: 125 ALTNEEMDEFIQLVTMG 141
>gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633]
gi|28808283|dbj|BAC61488.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 165
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ + + + + ++LKEY+I + G K E GD + PEG Y + + +
Sbjct: 29 LVKVDKSKRRMYLIE-----DGIILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDY--V 81
Query: 113 NPNSKYFLSINIGFPNEFD--KAHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ S++I +P+ D +AH R G ++ IHG + GC
Sbjct: 82 IEDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 141
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N++M E +V
Sbjct: 142 ALTNEEMDEFIQLVTMG 158
>gi|152991674|ref|YP_001357395.1| hypothetical protein SUN_0078 [Sulfurovum sp. NBC37-1]
gi|151423535|dbj|BAF71038.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 196
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 44/203 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRS---------LIDKAEHPLSENLIISMQKKRTSPFHP 51
+ N + + +F++GC R+ I + LS + K
Sbjct: 2 IKNIVLLSILGTAVFISGCGEPRAYGKVDNTPYAIGECRQELSHGTDVDQGKLADK---- 57
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIETGDEQAPEGFYYIGWN 110
I ++K + L ++++ LL KI G G KI+ GD + PEG Y+I
Sbjct: 58 --IVVYKKKRKLSMYRQG-----KLLYACKISLGKNGDKGNKIQAGDYRTPEGSYWIVRK 110
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------AS 149
+P + + S+ I +PNE DKA R G + IHG+ +
Sbjct: 111 KCDP--RLYKSLMISYPNEADKARARAHGAKPGGYITIHGQPKWNADGHADRYTLAHDWT 168
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC A+ NK + ++ V++ ++
Sbjct: 169 EGCMAVPNKAIDTLWRSVKNGVK 191
>gi|323144996|ref|ZP_08079556.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT
12066]
gi|322415275|gb|EFY06049.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT
12066]
Length = 212
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 36/196 (18%)
Query: 9 LFALFIFLNGCHHSRSLIDKAE-------HPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
LFA+ F++ C + ++ P+ + P + ++
Sbjct: 12 LFAVGFFVSSCSTYTKIDRSSDLYYEALTEPVIYDRDYDYVNLGRFANLPIYPKGYRGPK 71
Query: 62 IL--EIWKRNVDAE------YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
L + + + +++ Y I G K GD++ PEG Y + + +N
Sbjct: 72 KLIDHVIVNKANHQMFLMKKDKVIRSYWIALSDKPVGDKQYEGDKRTPEGTYTLDY--IN 129
Query: 114 PNSKYFLSINIGFPNEFD-----KAHNRTGADLMIHGEC--------------ASAGCYA 154
NS Y+ S +I +PN+ D K R G +MIHG+ + GC A
Sbjct: 130 YNSNYYKSFHISYPNDQDIEEAKKLGKRPGGMIMIHGQPYNSSEYHATVQRSDWTDGCIA 189
Query: 155 MNNKQMQEIYAIVRDS 170
+ N +M E ++V
Sbjct: 190 ILNPEMDEFISLVDPG 205
>gi|90022704|ref|YP_528531.1| hypothetical protein Sde_3062 [Saccharophagus degradans 2-40]
gi|89952304|gb|ABD82319.1| ErfK/YbiS/YcfS/YnhG family protein [Saccharophagus degradans 2-40]
Length = 158
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ L + K ++K+Y + + G K + GDE+ PEG Y + +
Sbjct: 22 LVKVVKSKGALYLMKGET-----VVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYKK- 75
Query: 113 NPNSKYFLSINIGFPNEFD--KAHNR---TGADLMIHGE--------------CASAGCY 153
+S ++ +++I +PN D KA R G +M+HG+ + GC
Sbjct: 76 -EDSAFYRAMHISYPNAEDVRKAKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCI 134
Query: 154 AMNNKQMQEIYAIVRDS 170
A+ N M E V+
Sbjct: 135 ALTNSDMDEFMDKVKVG 151
>gi|39995292|ref|NP_951243.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|307634660|gb|ADI83018.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR
domain-containing [Geobacter sulfurreducens KN400]
Length = 309
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 54/140 (38%), Gaps = 26/140 (18%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
L + T I I K + L + +++ YK+ GPK G
Sbjct: 157 LEQKVFAIATRKGAVDKILIEKKDRRLSLLSMG-----EVIRTYKVALGGNPVGPKERQG 211
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG------ 145
D + PEG Y I N S+Y LS+ I +PNE DK R G D+MIHG
Sbjct: 212 DNKTPEGSYVI--EGRNKGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLS 269
Query: 146 --------ECASAGCYAMNN 157
+ GC A+ +
Sbjct: 270 QVGAAHAEVDWTQGCIAVTD 289
>gi|117619935|ref|YP_855158.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561342|gb|ABK38290.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 163
Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + K+ L + K + +K Y I G K GD++ PEG Y + +
Sbjct: 29 MVVVKKSSYSLTLMK-----DGKEVKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKT 83
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAM 155
N S Y+ +I+I +PN D R G +MIHG+ + GC AM
Sbjct: 84 N--SNYYKAIHINYPNLDDIKAANEMGVRPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAM 141
Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177
NK + E++ + +Q
Sbjct: 142 LNKDLDEVWNAIEPGTPIVIQP 163
>gi|148978670|ref|ZP_01815073.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3]
gi|145962208|gb|EDK27491.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3]
Length = 242
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 26/171 (15%)
Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78
S + +A S + T++++ K++ + + K + +++
Sbjct: 72 AQGSSQRLPQASLLEPYMAPDSFSEIDPLLQVVTLVKVDKSKRRMYLLKGD-----EVVQ 126
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136
E++I G K GD + PEG Y + + + S+++ S++I +P D+
Sbjct: 127 EFRIALGKEPKGHKRFEGDNRTPEGEYTLDY--IMERSEFYRSVHINYPRSSDRQWAEEN 184
Query: 137 ---TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
G ++ IHG + GC A+ N+ M E +V+
Sbjct: 185 DVDPGGNIKIHGIKNGERRSPGFIQSFDWTDGCIALTNQDMDEFIQLVKMG 235
>gi|218676977|ref|YP_002395796.1| hypothetical protein VS_II1218 [Vibrio splendidus LGP32]
gi|218325245|emb|CAV27216.1| conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 257
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 26/170 (15%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
S ++ S L + + T++++ K++ + + K + +++E
Sbjct: 88 QGSSKRPPQSSSQQSYTLTGPSSEADSLSQVVTLVKVDKSKRRMYLLKGD-----EVIQE 142
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR--- 136
++I G K GD + PEG Y + + + S + S++I +P D
Sbjct: 143 FRIALGKQPKGHKRFEGDNRTPEGEYQLDY--VMEESDFHRSVHISYPQPSDMQWAEEND 200
Query: 137 --TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
G ++ IHG + GC A+ N+ M E +V+
Sbjct: 201 VDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCIALTNQDMDEFLQLVKMG 250
>gi|86145077|ref|ZP_01063409.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
gi|85837976|gb|EAQ56088.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
Length = 257
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 26/170 (15%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
S ++ S L + + T++++ K++ + + K + +++E
Sbjct: 88 QGSSKRPPQSSSQQSYTLTGPSSEADSLSQVVTLVKVDKSKRRMYLLKGD-----EVIQE 142
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR--- 136
++I G K GD + PEG Y + + + S + S++I +P D
Sbjct: 143 FRIALGKQPKGHKRFEGDNRTPEGEYQLDY--VMEESDFHRSVHISYPQPSDMQWAEEND 200
Query: 137 --TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
G ++ IHG + GC A+ N+ M E +V+
Sbjct: 201 VDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCIALTNQDMDEFLQLVKMG 250
>gi|163852564|ref|YP_001640607.1| hypothetical protein Mext_3148 [Methylobacterium extorquens PA1]
gi|163664169|gb|ABY31536.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 182
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 2 TNRYNILLFALFIFLNGCH--HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
R ++ L + G S + + E PL + + + + K
Sbjct: 4 RGRIAAVIGGLAVLGAGAVVLADFSQVGRTEPPLVAQAERADR-----------VLVEKA 52
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
L + + E +L Y I G K GD + PEG Y + NP S
Sbjct: 53 ARRLTLLR-----EGRVLATYPISLGFAPEGHKAREGDGRTPEGVYTTAFR--NPRSVAH 105
Query: 120 LSINIGFPNEFD----KAHNR-TGADLMIHG--------------ECASAGCYAMNNKQM 160
LS+ + +P+ D +A G D+MIHG + + GC + N +M
Sbjct: 106 LSLKVSYPSPADAAAVQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEM 165
Query: 161 QEIYAIV 167
+ IYA V
Sbjct: 166 RAIYARV 172
>gi|126664087|ref|ZP_01735081.1| protein ERFK [Flavobacteria bacterium BAL38]
gi|126624036|gb|EAZ94730.1| protein ERFK [Flavobacteria bacterium BAL38]
Length = 170
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 38/158 (24%)
Query: 29 AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88
E PL ++ I + ++K+++ L + + L+K Y I
Sbjct: 22 PEQPLPKDSKID------------AMIVYKSKHQLLAFSKG-----KLIKTYTISLGRNP 64
Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMI 143
G K GD++ PEG Y I ++ NPNS + ++ I +PN+ D A + G ++ I
Sbjct: 65 VGAKEYEGDQKTPEGTYSI--HDKNPNSGWHKNLGISYPNQNDMAKAKRLGKPAGGNIKI 122
Query: 144 HG--------------ECASAGCYAMNNKQMQEIYAIV 167
HG + + GC A+ N ++ E+YA V
Sbjct: 123 HGLKNGKGYIGKFHRWQDWTLGCIAVTNAEIDELYAAV 160
>gi|330831248|ref|YP_004394200.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565]
gi|328806384|gb|AEB51583.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565]
Length = 141
Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125
+ + + LK Y I G K + GD++ PEG Y + + N S Y+ +I+I
Sbjct: 15 YSLTLMKDGKELKRYWIALGPAPKGHKQQEGDQRTPEGRYTLDYKKTN--SGYYKAIHIN 72
Query: 126 FPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAMNNKQMQEIYAIVR 168
+PN D R G +MIHG+ + GC AM N ++ E++ +
Sbjct: 73 YPNLDDIKRANELGVRPGGMIMIHGQRNSIGNRRVQPSNWTNGCIAMLNHELDEVWDAID 132
Query: 169 DS 170
Sbjct: 133 PG 134
>gi|145297687|ref|YP_001140528.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850459|gb|ABO88780.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 173
Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I + K+ L + K + +K Y I G K GD++ PEG Y + +
Sbjct: 39 MIVVKKSSYSLTLMK-----DGKEVKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKT 93
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAM 155
N S Y+ +I+I +PN D G +MIHG+ + GC AM
Sbjct: 94 N--SNYYKAIHINYPNLDDIKTANEMGVNPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAM 151
Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177
N + E++ + +Q
Sbjct: 152 LNHDLDEVWNAIEPGTPIIIQP 173
>gi|261250849|ref|ZP_05943423.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891]
gi|260937722|gb|EEX93710.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891]
Length = 127
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134
++KE++I G K+ GD++ PEG YY+ + + +S ++ SI+I +PN D A+
Sbjct: 8 QVIKEFRIALGKRPKGHKVYEGDQRTPEGRYYLDF--VMDSSDFYRSIHISYPNPNDVAY 65
Query: 135 N-----RTGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170
G ++ IHG + GC A+ N++M E+ +V+
Sbjct: 66 ANKLNVSPGGNIKIHGLKNGETRPAKYIQSFDWTDGCIAITNQEMDELLKLVKVG 120
>gi|86137252|ref|ZP_01055830.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
gi|85826576|gb|EAQ46773.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
Length = 178
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 29/154 (18%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P + ++ Q R I I K++ L + + VL +Y I G
Sbjct: 27 APKPSPVNLADQVDRID-----YILIEKSKRRLS---AHRKGQQVL--QYSIALGFAPIG 76
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG 145
K GD + PEG + I N N NS + LS+ I +P D A G D+ IHG
Sbjct: 77 DKSREGDGKTPEGLFKI--NRRNSNSSFHLSLGIDYPRPEDIARAEALGLNPGGDIFIHG 134
Query: 146 EC------------ASAGCYAMNNKQMQEIYAIV 167
+ +AGC A++N +M ++ +
Sbjct: 135 QPNRLGNHLMLPGDWTAGCIAISNSEMVALWRLA 168
>gi|152991672|ref|YP_001357393.1| hypothetical protein SUN_0076 [Sulfurovum sp. NBC37-1]
gi|151423533|dbj|BAF71036.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 215
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 32/189 (16%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-VIRIFKNENIL 63
+ I L +F +GC S K ++ LSE M + S I + K E +
Sbjct: 32 FLIYSIVLVLFFSGCEPSG---PKNQYNLSECKKELMTAEDYSEADAIDRIVVVKKERKM 88
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
++K + + + I G K + GD + PEG ++I +P KY+ S+
Sbjct: 89 YLYK-----DGKVKGTFPISLGRNPVGHKQQKGDYRTPEGEFFIHRKLCSP--KYYRSLC 141
Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCYAMNNKQMQE 162
I +P DKA R G D+ IH + + GC A+ N M++
Sbjct: 142 ISYPRPEDKARARARGVNPGGDITIHAQPKWNADGKGDKYTLNRNWTQGCVAVTNSSMKK 201
Query: 163 IYAIVRDSL 171
++ VR+ +
Sbjct: 202 LWYAVREGV 210
>gi|84393864|ref|ZP_00992608.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
12B01]
gi|84375511|gb|EAP92414.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
12B01]
Length = 259
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T++++ K++ + + K +++E++I G K GD + PEG Y + +
Sbjct: 122 TLVKVDKSKRRMYLLKGE-----EVVQEFRIALGKQPKGHKRFEGDNRTPEGKYQLDY-- 174
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGC 152
+ S ++ S++I +P D + G ++ IHG + GC
Sbjct: 175 VMEESDFYRSVHINYPQSSDMQWAQKNDVDPGGNIKIHGIKNGERRSPSFIQSFDWTDGC 234
Query: 153 YAMNNKQMQEIYAIVRDS 170
A+ N+ M E +V+
Sbjct: 235 IALTNQDMDEFIQLVKMG 252
>gi|119477590|ref|ZP_01617740.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium
HTCC2143]
gi|119449093|gb|EAW30333.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium
HTCC2143]
Length = 163
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 58/152 (38%), Gaps = 26/152 (17%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
P + + K E L + K V E+ I G K E GDE+ PEG
Sbjct: 19 AQYPELADRVLVAKAEKKLYLIKDGVP-----FLEFPIALSPKPRGHKREQGDERTPEGR 73
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------------ 147
Y + + N +S ++ SI I +PN+ D G +MIHG
Sbjct: 74 YILDFK--NQDSDFYKSIRISYPNQQDLHRAELNGVDPGGAIMIHGMPNESSLPASLIQQ 131
Query: 148 --ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
+ GC A+ N M EI+A V +Q
Sbjct: 132 FNWTDGCIAVTNGAMDEIWAAVETGTPIEIQP 163
>gi|312892133|ref|ZP_07751631.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
gi|311295384|gb|EFQ72555.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
18603]
Length = 173
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 21/138 (15%)
Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
P P I I K I + V A+ L+K Y I S G K D + P+G Y+
Sbjct: 26 EPKLPAHITIDKMIAIKSRRQLLVYAQGKLIKTYAISLGSCPAGKKQFEHDGKTPDGVYF 85
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------C 147
I NPNS ++ I +PN+ D + TG D+ IHG
Sbjct: 86 INAK--NPNSVCHKNLGISYPNQADVQQAKKFKLPTGGDIKIHGLTNGLGFIGKFHRWYN 143
Query: 148 ASAGCYAMNNKQMQEIYA 165
+AGC A+ N ++ ++Y+
Sbjct: 144 WTAGCIALTNAEIDDLYS 161
>gi|237807104|ref|YP_002891544.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
gi|237499365|gb|ACQ91958.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
Length = 162
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
L L++ T ++ + K++ L ++ + V LK Y + GPK
Sbjct: 6 LISGLLLGFSVNATIMPKADLVVVKKSQYSLTLYSKGVP-----LKRYWVALGPNPRGPK 60
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE- 146
I GD + PEG Y + + + +S Y+ + +I +P+ D + G +++HG+
Sbjct: 61 IREGDNKTPEGRYLLDYRKM--DSNYYKAFHISYPSLNDMKRAQHLGVEPGGQILLHGQR 118
Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N M E++ V
Sbjct: 119 KGSVMSDETLQRSNWTNGCIALINADMDELWESVSPG 155
>gi|261212665|ref|ZP_05926949.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341]
gi|260837730|gb|EEX64407.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341]
Length = 119
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 29/127 (22%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135
+++EY+I G K + GD++ PEG YY+ + + +S ++ +I+I +P+ D+ H
Sbjct: 1 MVREYRIALGKSPKGHKQQEGDQRTPEGNYYLDF--ITQDSHFYRAIHISYPSPQDERHA 58
Query: 136 -----RTGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
G D+ IHG + GC A+ N +M + ++V Q
Sbjct: 59 AQLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCIALTNSEMDDFLSLV--------Q 110
Query: 177 SHIQIQA 183
I
Sbjct: 111 PGTPIHI 117
>gi|83951624|ref|ZP_00960356.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83836630|gb|EAP75927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 185
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 32/188 (17%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R L + + L G RS +S +I + K+E
Sbjct: 8 RRRLIRLTALMLVVLIGVALWRS--------VSIAPPPPPAPLPPLTGTIDLIELDKSER 59
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
+ +++ E L+ Y++ G K GD + PEG + I N S++ LS
Sbjct: 60 RMTVYR-----EGEALRSYEVALGFAPEGDKQIEGDGKTPEGEFRIDRR--NDQSQFHLS 112
Query: 122 INIGFP-----NEFDKAHNRTGADLMIHGEC------------ASAGCYAMNNKQMQEIY 164
+ I +P G D+ HG+ +AGC A+ N +++E++
Sbjct: 113 LGINYPRAEDRARAAAQGVSPGGDIFFHGQPNKLPDILRRKGDWTAGCIALTNAEIEELW 172
Query: 165 AIVRDSLR 172
+ R
Sbjct: 173 RVTPIGTR 180
>gi|126738023|ref|ZP_01753744.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6]
gi|126720520|gb|EBA17225.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6]
Length = 177
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 34/189 (17%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R L G + P L+ Q+ I I K+
Sbjct: 1 MLRRALQLSALCLTAALGWGLWHAFAP---APSIPTLVEDAQRVDQ-------IVIDKSA 50
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L + E VL E+ I G K E GD + PEG + + N N NS + L
Sbjct: 51 RRL---LASRQGETVL--EFDIALGFEPVGDKAEEGDGKTPEGIFRV--NRRNANSSFHL 103
Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC------------ASAGCYAMNNKQMQEI 163
S+ + +P D G D+ IHG+ +AGC A++N +M+ +
Sbjct: 104 SLGLDYPQAEDLQRAEDAGIDPGGDIFIHGQPNAVGGALTLPGDWTAGCIAISNSEMERL 163
Query: 164 YAIVRDSLR 172
+ +V +
Sbjct: 164 WQLVDIGTK 172
>gi|254562322|ref|YP_003069417.1| hypothetical protein METDI3936 [Methylobacterium extorquens DM4]
gi|254269600|emb|CAX25571.1| conserved hypothethical protein [Methylobacterium extorquens DM4]
Length = 182
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSL--IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
R L+ L + G + + + E PL + + + + K
Sbjct: 4 RGRIAALIGGLAVLGAGAVVLADVFQVGRTEPPLVAEAERADR-----------VLVEKA 52
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
L + + E +L Y I G K GD + PEG Y + + NP S
Sbjct: 53 ARRLTLLR-----EGRVLATYPISLGFAPEGHKAREGDGRTPEGVYAVAFR--NPRSVAH 105
Query: 120 LSINIGFPNEFDKAHN-----RTGADLMIHG--------------ECASAGCYAMNNKQM 160
LS+ + +P+ D A G D+MIHG + + GC + N +M
Sbjct: 106 LSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEM 165
Query: 161 QEIYAIV 167
+ IYA V
Sbjct: 166 RAIYARV 172
>gi|218510701|ref|ZP_03508579.1| hypothetical protein RetlB5_26713 [Rhizobium etli Brasil 5]
Length = 164
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 38/176 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + +L A + + P++ M+++ +IR++K+E
Sbjct: 1 MRTKIIVLAVATSSLFVYTKVMARIGSGSPPPVAP-----MEQRA------DLIRVYKSE 49
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
+ + + + + Y+I GPK GDE+ PEG Y I W NP S
Sbjct: 50 RRMVLLRGDAP-----IATYQISLGGAADAGPKQREGDEKTPEGLYEIDWR--NPKSMAH 102
Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMN 156
LS++I +PN ++ G +MIHG + GC A++
Sbjct: 103 LSLHISYPNPKEQRAAEANGFPPGGSIMIHGLPNGWGLLGQAHRLWDWTDGCIAVS 158
>gi|240139898|ref|YP_002964375.1| hypothetical protein MexAM1_META1p3361 [Methylobacterium extorquens
AM1]
gi|240009872|gb|ACS41098.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 182
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 2 TNRYNILLFALFIFLNGCH--HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
R ++ L + G S + + E PL + + + + K
Sbjct: 4 RGRIAAVIGGLAVLGAGAVVLADFSQVGRTEPPLVAEAERADR-----------VLVEKA 52
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
L + + E +L Y I G K GD + PEG Y I + NP S
Sbjct: 53 ARRLTLLR-----EGRVLATYPISLGFVPEGHKAREGDGRTPEGVYAIAFR--NPRSVAH 105
Query: 120 LSINIGFPNEFDKAHN-----RTGADLMIHG--------------ECASAGCYAMNNKQM 160
LS+ + +P+ D A G D+MIHG + + GC + N +M
Sbjct: 106 LSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEM 165
Query: 161 QEIYAIV 167
+ IYA V
Sbjct: 166 RAIYARV 172
>gi|218531404|ref|YP_002422220.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
gi|218523707|gb|ACK84292.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
Length = 182
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 2 TNRYNILLFALFIFLNGCH--HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59
R ++ L + G S + + E PL + + + + K
Sbjct: 4 RGRIAAVIGGLAVLGAGAVVLADVSQVGRTEPPLVAEAERADR-----------VLVEKA 52
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
L + + E +L Y I G K GD + PEG Y + + NP S
Sbjct: 53 ARRLTLLR-----EGRVLATYPISLGFAPEGHKARDGDGRTPEGVYAVAFR--NPRSVAH 105
Query: 120 LSINIGFPNEFDKAHN-----RTGADLMIHG--------------ECASAGCYAMNNKQM 160
LS+ + +P+ D A G D+MIHG + + GC + N +M
Sbjct: 106 LSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEM 165
Query: 161 QEIYAIV 167
+ IYA V
Sbjct: 166 RAIYARV 172
>gi|312881783|ref|ZP_07741557.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370534|gb|EFP98012.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 157
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++++ K++ L + + + E++I G K E GD++ PEG YY+ + +
Sbjct: 21 LVKVDKSKRRLYLIENE-----RITHEFRIALGKQPKGHKSEQGDQRTPEGRYYLQF--I 73
Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153
+S+++ SI+I +P+ D+ G ++ IHG + GC
Sbjct: 74 LEDSEFYRSIHISYPSLDDRLGAMIFNRDPGGNIKIHGLRNGENRPAQFVQSFDWTNGCI 133
Query: 154 AMNNKQMQEIYAIVRDS 170
A++N+ M ++V++
Sbjct: 134 ALSNQDMDTFLSLVKEG 150
>gi|152982143|ref|YP_001352557.1| hypothetical protein mma_0867 [Janthinobacterium sp. Marseille]
gi|151282220|gb|ABR90630.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 393
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+SL ++ + + I+ M++ + + V+ + + L ++ + V+ ++ L +Y I
Sbjct: 104 KSLRERPDPDMVPRAILQMREDQKN-----VLLVDAKRSRLYVY-QRVNGQFKLTSDYYI 157
Query: 83 CAWSGTFG-PKIETGDEQAPEGFYYIGWNNLNPN-SKYFL--SINIGFPNEFDKAHNRTG 138
G G K + GD++ P G YYI +++ ++ I +PNE+DKA+ R+G
Sbjct: 158 S--QGRLGVNKFKEGDQKTPLGVYYITARLPGARLPEFYGPGALPINYPNEWDKANGRSG 215
Query: 139 ADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDS 170
+ + +HG +S GC + N ++E+ A V
Sbjct: 216 SGIWLHGTPSDSYSRPPLSSDGCVVLTNPDLKELSASVEIG 256
>gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100]
gi|39575459|emb|CAE79627.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 27/133 (20%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ + K +L + + +L Y + G K GD++ PEG Y+ ++
Sbjct: 72 FVLVDKKRRMLHVMR-----HGQVLATYAVALGGNPQGHKKNEGDQRTPEGRYF--FDLK 124
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGEC--------------ASAGC 152
S+Y L + I +PN D A + G ++IHG + GC
Sbjct: 125 KAKSEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIHGLPNSWVKRKVIRHPRDWTKGC 184
Query: 153 YAMNNKQMQEIYA 165
A+ N +++EIYA
Sbjct: 185 MAVRNYEIEEIYA 197
>gi|134094136|ref|YP_001099211.1| hypothetical protein HEAR0900 [Herminiimonas arsenicoxydans]
gi|133738039|emb|CAL61084.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 420
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+SL ++ + L + + M+ + ++ + + L +++R+ D + L+ +Y +
Sbjct: 130 KSLRERPDPNLIPRVFLQMRADQKK-----LLLVDAKRSRLYVYERSKD-QVKLVSDYYV 183
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFL--SINIGFPNEFDKAHNRTGA 139
K++ GD++ P G YYI +++ ++ I +PNE+DKA+ R G+
Sbjct: 184 SQGKLGV-DKLKEGDQKTPLGVYYITARLDGARLPEFYGPGALPINYPNEWDKANGRGGS 242
Query: 140 DLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDS 170
+ +HG +S GC + N ++E+ A V
Sbjct: 243 GIWLHGTPSDSYSRPPLSSDGCVVLTNPDLKELSASVEIG 282
>gi|329906069|ref|ZP_08274352.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547344|gb|EGF32175.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium
IMCC9480]
Length = 416
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
SL ++ + L ++ ++ + F + + L ++ +N + LL +Y I
Sbjct: 131 SLRERPDPELVPRALLKLRDDQRFAF-----VVDTKRSRLYVY-QNTRGQLKLLSDYYIT 184
Query: 84 AWSGTFG-PKIETGDEQAPEGFYYIGWN-NLNPNSKYFLS--INIGFPNEFDKAHNRTGA 139
G G K+ GD++ P G YYI N ++ + + I +PNE+D+ R+G+
Sbjct: 185 --QGKLGSNKLTEGDQKTPVGVYYITGRLGRNRLPDFYGAGALPINYPNEWDRMKGRSGS 242
Query: 140 DLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
+ +HG + S GC + N +++++ V
Sbjct: 243 GIWLHGTPSTSYSRPPLASDGCVVLTNPDLEKLFRSVEPG 282
>gi|116750933|ref|YP_847620.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB]
gi|116699997|gb|ABK19185.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB]
Length = 157
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 39/154 (25%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
S I ++K++ L + VL++EY I G K GD + PEG +
Sbjct: 1 MSLVSNPKIYVYKSDRRLLL-----VNNGVLVREYPIGLGFSPNGDKFMRGDGRTPEGQF 55
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHN----------------------RT------ 137
+I NPNS+++ S+ + +P+ R
Sbjct: 56 FICAK--NPNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVL 113
Query: 138 GADLMIH----GECASAGCYAMNNKQMQEIYAIV 167
G D+ IH G + GC A+ N M E+++IV
Sbjct: 114 GGDIFIHGGGAGRDWTWGCVAVRNSAMDELFSIV 147
>gi|162451714|ref|YP_001614081.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56']
gi|161162296|emb|CAN93601.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56']
Length = 178
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 34/165 (20%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
L+ + + P T IRI K+E+ L++ +++ Y++ G GPK
Sbjct: 18 LTHTVPSLTAAQGGGP-PVTEIRIDKSEHTLDLVA-----GGKIVRSYRVALGPGGPGPK 71
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH------------NRT-GA 139
GD + P G Y + N + + + +PNE D+A R G
Sbjct: 72 RYEGDRRTPVGTYRVAGRI---NGLFHRFLIVSYPNEEDRARFAELKRRGEVPPGRGVGH 128
Query: 140 DLMIHG------------ECASAGCYAMNNKQMQEIYAIVRDSLR 172
+ IHG + GC A+++ ++ EI D +
Sbjct: 129 SIGIHGVGSAQLAGVHKESDWTLGCIALDDDEIDEIARRTPDGAK 173
>gi|319795776|ref|YP_004157416.1| erfk/ybis/ycfs/ynhg family protein [Variovorax paradoxus EPS]
gi|315598239|gb|ADU39305.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus EPS]
Length = 508
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + + + L + N D L+ +Y I K+ GD + P G YYI + L+
Sbjct: 250 IAVDASRSRLYLL-ENSDKGLKLVADYYISVGKSGT-DKLAEGDARTPLGVYYIT-SRLD 306
Query: 114 PNS--KYFLS--INIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160
P S ++ + + I +PN +D RTG+ + +HG AS GC M N +
Sbjct: 307 PKSLKDFYGAGALPINYPNPYDVRRGRTGSGIWLHGTPPQQFARAPLASDGCVVMANPDL 366
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194
+++ +QI A P +T++++Q
Sbjct: 367 KQLLR------------KVQIGATPV-VTARSLQ 387
>gi|308272917|emb|CBX29521.1| hypothetical protein N47_J05020 [uncultured Desulfobacterium sp.]
Length = 233
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 28/156 (17%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
+ + I +KK P +I + K+E L ++K V + Y +
Sbjct: 68 QKMVDETIAESKKKGI----PAII-VNKSERTLVLYKNGVP-----VWTYNVGLGRNGSL 117
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK-------------AHNRT 137
K +GD PEG Y I S+Y ++ + +PNE D+ A
Sbjct: 118 DKQRSGDNSTPEGKYRIT--QKKSESRYHKALLLNYPNEEDRKNFILAKKNGLIPAKAGI 175
Query: 138 GADLMIHGECA---SAGCYAMNNKQMQEIYAIVRDS 170
G + IHG + GC AM+N ++ I+ IV
Sbjct: 176 GGLIEIHGGGRNSMTYGCIAMDNSKIDHIFKIVPVG 211
>gi|82703004|ref|YP_412570.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
gi|82411069|gb|ABB75178.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
Length = 413
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80
+R+ + + P+ ++ + P I + L ++K NVD L +Y
Sbjct: 120 EARARLQRHLAPIPLDMTPKY-LLQMPPEQKYAIIADTGRSRLYLYK-NVDGSPRYLADY 177
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYF--LSINIGFPNEFDKAHNRT 137
I K++ GD++ P G Y++ N S ++ ++ I +PNE+DK H R+
Sbjct: 178 YISTGKNGS-QKLKEGDKKTPIGVYFVTDNLPRQRLSDFYGGMAFPINYPNEWDKRHGRS 236
Query: 138 GADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDSL 171
G + +HG AS GC + N + + + ++ +
Sbjct: 237 GYGIWLHGTPPDTYSRPPRASDGCVVLANDDLNALASTLQVGI 279
>gi|239817408|ref|YP_002946318.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
gi|239803985|gb|ACS21052.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
Length = 374
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 16/150 (10%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+ Q S I + + + L + N D L+ +Y + G K
Sbjct: 94 PPAGTVPSQFLALSTRSRYAIAVDASRSRLYLL-ENSDKGLQLVADYYVSVGKSGIG-KA 151
Query: 94 ETGDEQAPEGFYYIGWNNLNPNS--KYFLS--INIGFPNEFDKAHNRTGADLMIHGEC-- 147
GD + P G YY+ ++L+P S ++ + + I +PN +D +TG+ + +HG
Sbjct: 152 TEGDARTPLGVYYVT-SSLDPKSLRDFYGAGALPINYPNPYDVRRGKTGSGIWLHGTPPQ 210
Query: 148 -------ASAGCYAMNNKQMQEIYAIVRDS 170
AS GC M N ++++ V+
Sbjct: 211 QFSRAPLASDGCVVMANPDLKQLLRKVQIG 240
>gi|308270997|emb|CBX27607.1| hypothetical protein N47_H24290 [uncultured Desulfobacterium sp.]
Length = 166
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136
Y G K + GD + PEG Y I + +S+++ S+++ +PN D ++
Sbjct: 52 SYNAALGR-KSGRKAQKGDNRTPEGLYIIV--QHDADSRFYKSLHLSYPNRSDIIRSQKS 108
Query: 137 ---TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170
G L IHG + GC A++N++M EI+ +V +
Sbjct: 109 GYPPGNALAIHGLPEGFEDLGTFQSKRNWTKGCIAVSNEEMDEIWELVENG 159
>gi|213028217|ref|ZP_03342664.1| hypothetical protein Salmonelentericaenterica_40310 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 99
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
L + L C L+ + +S + K+ P I+IFK E L+++ + +
Sbjct: 2 LAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MG 56
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114
+Y LL YKIC +SG GPK GD ++PEGFY + N L P
Sbjct: 57 EQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKP 99
>gi|297537707|ref|YP_003673476.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
gi|297257054|gb|ADI28899.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
Length = 408
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVDAEYVLLKEY 80
+ E LS + + +P +I + +++ L ++K N + +Y
Sbjct: 116 AEARVRIERYLSNENLDKLPNLLLAPNDQQSHLIVVDTDKSRLYLYKNN-GGNLSYVADY 174
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTG 138
+ G K GD++ P G Y+ P + + + + +PNE+D HNR+G
Sbjct: 175 YVTVGKNGVG-KQTEGDKRTPIGVYFASQKLTKPLADMYGNGAYPLNYPNEWDMQHNRSG 233
Query: 139 ADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
+ + +HG + S GC + N+ + I I++
Sbjct: 234 SGIWLHGTPSNTYSRPPNASDGCVVLTNQDLNAIAPILQTG 274
>gi|307720793|ref|YP_003891933.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM
16294]
gi|306978886|gb|ADN08921.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM
16294]
Length = 330
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPN 115
K+++ L I+ ++ + Y L KEY A++G G K + GD + P G Y I +
Sbjct: 79 DKSKSELLIYSKDSNNTYKLRKEY--SAFTGKLKGDKRKEGDLKTPIGVYDIIKKISKVD 136
Query: 116 SKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA-------SAGCYAMNNKQMQ 161
S Y ++ +PN +D+ +TG + IHG + GC A+NNK ++
Sbjct: 137 SFYGPMAFVTSYPNLYDRYEGKTGQGIWIHGLPTNQERDAFTKGCIAINNKSIE 190
>gi|268679011|ref|YP_003303442.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM
6946]
gi|268617042|gb|ACZ11407.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM
6946]
Length = 365
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I K E+++ + D L+K + + G KI+ GD + P G Y I
Sbjct: 110 LIVCEKERKRCEVYRNSEDEGLELIKGHDVIMGKN--GDKIKRGDLKTPVGVYEIT-KRF 166
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQ 161
P+ ++ L+ ++ +PN FD + G+ + IHG S GC M N +Q
Sbjct: 167 KPSDPFYGPLAFSLSYPNLFDVLRGKNGSGIWIHGMPLDGKDREDLSKGCVVMENDAIQ 225
>gi|254459078|ref|ZP_05072501.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
gi|207084349|gb|EDZ61638.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
Length = 322
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNNLNPN 115
K ++ L ++ ++ + Y KEY A++G G KI+ GD + P G Y I N
Sbjct: 68 DKEKSTLNLYVKDNNNSYGFKKEY--SAYTGKIKGDKIKEGDLKTPIGIYQITKKLSTEN 125
Query: 116 --SKYF--LSINIGFPNEFDKAHNRTGADLMIHGECA-------SAGCYAMNNKQMQ 161
++ L+ +PN +D + G + IHG + GC A+NN ++
Sbjct: 126 KLDSFYGPLAFVTSYPNVYDTYRGKNGHGIWIHGLPTEQDRDEFTKGCIAINNPNIE 182
>gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228]
gi|57019237|gb|EAL55943.1| conserved hypothetical secreted protein [Campylobacter coli RM2228]
Length = 325
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 58 KNENILEIW-----KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
K + IL ++ K D E + G G K GD + P GFY +G
Sbjct: 72 KTDKILRVYSYSDGKIKQDFEQKAIIT-------GLMGDKQVEGDLKTPVGFYELG-RKF 123
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
NP Y+ + +PN DK +TG + IHG + GC A+ N+ ++
Sbjct: 124 NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIALFNENLE 183
Query: 162 EIYAIVRD 169
E +V+D
Sbjct: 184 EFAKVVQD 191
>gi|305432036|ref|ZP_07401203.1| conserved hypothetical secreted protein [Campylobacter coli JV20]
gi|304445120|gb|EFM37766.1| conserved hypothetical secreted protein [Campylobacter coli JV20]
Length = 325
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 58 KNENILEIW-----KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
K + IL ++ K D E + G G K GD + P GFY +G
Sbjct: 72 KTDKILRVYSYSDGKIKQDFEQKAIIT-------GLMGDKQVEGDLKTPVGFYELG-RKF 123
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
NP Y+ + +PN DK +TG + IHG + GC A+ N+ ++
Sbjct: 124 NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIALFNENLE 183
Query: 162 EIYAIVRD 169
E +V+D
Sbjct: 184 EFAKVVQD 191
>gi|117926285|ref|YP_866902.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1]
gi|117610041|gb|ABK45496.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1]
Length = 415
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIG--- 108
VI + + L ++ N + L+ +Y I SG G KI+ GD++ P G YY+
Sbjct: 154 VIAVDLTRSRLFLFD-NREGMPKLIADYYIS--SGKKGAEKIKQGDKRTPAGLYYVTEYI 210
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCYAMNNKQ 159
P+ ++ I +PNE+D+ H RTG + +HG + S GC A+ N
Sbjct: 211 PGEKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCVALTNLD 270
Query: 160 MQEI 163
+E+
Sbjct: 271 FEEL 274
>gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
gi|71846177|gb|AAZ45673.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
Length = 431
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 57/152 (37%), Gaps = 17/152 (11%)
Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV--DAEYVLLKEYKI 82
+ KA + + P I + + L +++ + D + +Y I
Sbjct: 140 VRLKAYREKPPADFVPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYI 199
Query: 83 CAWSGTFGP-KIETGDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138
G G K+ GD++ P G Y++ + + + +PNE+DK R G
Sbjct: 200 TH--GKLGAEKLVEGDKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGG 257
Query: 139 ADLMIHGECA---------SAGCYAMNNKQMQ 161
+ + +HG + S GC + N+ +
Sbjct: 258 SGIWLHGTPSNTFARPPRASDGCVVLTNQDLD 289
>gi|86360290|ref|YP_472178.1| hypothetical protein RHE_PE00012 [Rhizobium etli CFN 42]
gi|86284392|gb|ABC93451.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 196
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 19/136 (13%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71
+ + + + S M+++ +IR++K+E + K +
Sbjct: 1 MLAIAAVSLFAYTKVMARIGSGSPPPAAPMEQRA------DLIRVYKSERRMVFLKGDAP 54
Query: 72 AEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130
+ Y+I S GPK GDE+ PEG Y I W NP S LS++I +P
Sbjct: 55 -----IAAYEISLGSAADAGPKQREGDEKTPEGPYEIDWR--NPKSTAHLSLHISYPKPE 107
Query: 131 DKAHNR-----TGADL 141
++ G ++
Sbjct: 108 EQRAAEVNGFPPGGNI 123
>gi|260221390|emb|CBA29904.1| hypothetical protein Csp_A14490 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 367
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 16/166 (9%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
L L A I Q + + I + + L ++ N +A
Sbjct: 71 LQALRAESQLRIAAIKEPPPADRIPAQFVALAKRNKHAIAVDTAKARLYLF-ENTEAGPR 129
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL----SINIGFPNEFD 131
LL Y I G K GD++ P G Y+I +NL+P S L ++ + +PN D
Sbjct: 130 LLANYYISVGKAGVG-KNVEGDQRTPLGAYFIT-SNLDPTSLKDLYGSGALPVNYPNVLD 187
Query: 132 KAHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168
+TG + +HG + + GC A+ N + I V
Sbjct: 188 LRRGKTGGGIWLHGTPSTQFTRAPQATDGCVAVANPDLLRIINTVE 233
>gi|171058352|ref|YP_001790701.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6]
gi|170775797|gb|ACB33936.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6]
Length = 642
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 14/150 (9%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
SL +A L Q + +P ++ + + + L + N L+ + +
Sbjct: 353 ASLRLQALRDLPPAGAWPKQVLQLAPSVRHLVAVDTSRSRLYVL-ENQPGGPRLIAHHYV 411
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFLS--INIGFPNEFDKAHNRTGA 139
S G K E GD++ P G YYI ++ + + + +PN+ D+ RTGA
Sbjct: 412 SIGSQGVG-KREEGDQRTPLGTYYITSKLDGKQLGDFYGAGALPLNYPNDHDRHLGRTGA 470
Query: 140 DLMIHGECA---------SAGCYAMNNKQM 160
++ +HG + + GC + N +
Sbjct: 471 NIWLHGTPSAQFARAPRATNGCIVLANDDL 500
>gi|213418318|ref|ZP_03351384.1| hypothetical protein Salmonentericaenterica_10609 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 76
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238
+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K +
Sbjct: 1 MSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKPLS 58
>gi|301166890|emb|CBW26468.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 190
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 63/180 (35%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICA---WSGTF--GP-KIETGDEQAPEGFYYI 107
I + K++ +++W N + K Y I ++ K GD Q P GFY I
Sbjct: 26 IVVLKDKREMQLWSGN-----EIYKVYNIKLSIAYNNPLFRAHEKRREGDNQTPVGFYKI 80
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNR--------TGADLMIHGEC------------ 147
N + S+ I +PN DK + + G ++IHG
Sbjct: 81 SKKRQRTN--FPKSLLINYPNWKDKHNAKIRGIPEDEIGGMILIHGNPYRVNKTVRDYAA 138
Query: 148 ----------------------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ +++M EI+ +V I +P
Sbjct: 139 KLGIEADTVERWARDYFYPFFDWTNGCVAVTDEEMDEIFELVD--------KDTPINIYP 190
>gi|255322067|ref|ZP_05363215.1| 60 kDa chaperonin [Campylobacter showae RM3277]
gi|255300880|gb|EET80149.1| 60 kDa chaperonin [Campylobacter showae RM3277]
Length = 311
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 26/196 (13%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIF 57
M +L+F + F + + +L D + L + + +I +
Sbjct: 1 MKKLLGLLIF--YAFFSQILLAEALADANLTGAKYWLKKLGAADVRYGYYEAKTKIIVVN 58
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + L+ ++ A + + +G G K + GD + P G Y + + P+
Sbjct: 59 KAQKTLQSFEYAGGALKEIFSQ---SVITGKSGDKFKEGDLKTPVGVYDVT-DKFTPSDP 114
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
++ L++++ +PN DKA +TG + IHG + GC A NN A+
Sbjct: 115 FYGPLAMSLSYPNAHDKAAQKTGGGIWIHGLPMKGKRDDEVKTRGCVAFNND------AL 168
Query: 167 VRDSLRGNMQSHIQIQ 182
V+ + + I
Sbjct: 169 VKFGKLIGSEGVVIIS 184
>gi|319957804|ref|YP_004169067.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
16511]
gi|319420208|gb|ADV47318.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
16511]
Length = 188
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 35/193 (18%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M+ L AL ++L GC K S + + VI+ + E
Sbjct: 1 MSKIVIGLTAALALWLGGCGAP---TGKPGGRYSAKDCKPIPFRPDRAADKVVIK--QRE 55
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTF--GPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
+ + ++ ++K ++ T GPK++ GD P G Y I +
Sbjct: 56 HKVYVYHNG-----KVIKVFRSSLGKNTMSRGPKVQQGDFCTPVGHYRIVDKRCHA--LK 108
Query: 119 FLSINIGFPNEFDKAHN-----RTGADLMIHGEC----------------ASAGCYAMNN 157
+ ++ I +PN D A + G + HG+ + GC A+ N
Sbjct: 109 YRAMTISYPNTEDLARAKKLGVKPGDYITFHGQPYWNRDGHGDEYTLKHDWTNGCIALTN 168
Query: 158 KQMQEIYAIVRDS 170
K + +++ V+
Sbjct: 169 KDLDWLWSAVKVG 181
>gi|218516367|ref|ZP_03513207.1| hypothetical protein Retl8_23254 [Rhizobium etli 8C-3]
Length = 122
Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNN 111
+IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W
Sbjct: 35 LIRVYKSERRMVLLKGDAP-----IAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWR- 88
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR 136
N S LS++I +P ++
Sbjct: 89 -NAKSTAHLSLHISYPKPEEQRAAE 112
>gi|253995882|ref|YP_003047946.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
gi|253982561|gb|ACT47419.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
Length = 417
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86
K NLI++ ++T ++ I +++ L +++++ D + + +Y I
Sbjct: 135 AKQSQAKQPNLILAPNAQQTH-----LMLIDTSKSRLYLYEKH-DNQLKYVADYYITVGK 188
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIH 144
K GD++ P G Y+ ++ + + +PNE+DKAHNR G+ + +H
Sbjct: 189 NGV-EKQSEGDKRTPIGVYFASTKLKQQLPDFYGEGAYPLSYPNEWDKAHNRNGSGIWLH 247
Query: 145 GECA---------SAGCYAMNNKQMQEI 163
G + S GC + N+ ++ +
Sbjct: 248 GTPSSTYSRPPRASDGCVVVANQDLKAL 275
>gi|89900141|ref|YP_522612.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118]
gi|89344878|gb|ABD69081.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118]
Length = 414
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 16/171 (9%)
Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70
A L+ + KA + + Q S + I I + + L + +
Sbjct: 113 AAAPVLDQLRDESQMRLKALRERPPSGALPSQFLALSARNKHAIAIDASRSRLYLLENRP 172
Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS--KYFLS--INIGF 126
L+ +Y + K GD + P G Y+I +NL+P S ++ S + I +
Sbjct: 173 TG-LTLIADYYVSIGKSGLS-KNAEGDLRTPMGVYFIT-SNLDPKSLKDFYGSGALPINY 229
Query: 127 PNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168
PN D +TG + +HG A+ GC + N + + V
Sbjct: 230 PNVLDNLRGKTGGGIWLHGTPPGQFSRPPLATDGCVVLANPDLMALIRTVE 280
>gi|254469080|ref|ZP_05082486.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
gi|207087890|gb|EDZ65173.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
Length = 393
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
+ E L I + T P +I + N++ L +++ + EY
Sbjct: 100 DEAKKRIESHLHSATDIIKSARVTLPESIKNLIYVDTNKSRLYLFEIKNHTLIKIFDEYA 159
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGA 139
G K GD++ P G Y +G P S ++ + I +PN +DK N+TG
Sbjct: 160 -SIGKNGSG-KNFEGDKKTPLGVYTLGKKITQPLSDFYGDGAFPIDYPNVYDKLLNKTGH 217
Query: 140 DLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190
+ IHG +S GC ++N+ + + +I++D + + + ++ T+
Sbjct: 218 GIWIHGTPKDTYSRAPKSSDGCIVISNENLNILESILKD---KSTKVIVSKLSYDQYFTT 274
Query: 191 KNMQLYQNNPNYSF 204
N + + + +F
Sbjct: 275 DN----KIDNHNTF 284
>gi|86153307|ref|ZP_01071511.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612822|ref|YP_001000581.1| hypothetical protein CJJ81176_0915 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005512|ref|ZP_02271270.1| hypothetical protein Cjejjejuni_04735 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|85843033|gb|EAQ60244.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249350|gb|EAQ72310.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|315058346|gb|ADT72675.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
Length = 325
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|57237735|ref|YP_178983.1| hypothetical protein CJE0985 [Campylobacter jejuni RM1221]
gi|57166539|gb|AAW35318.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
Length = 325
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|315124402|ref|YP_004066406.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315018124|gb|ADT66217.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 303
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|89094583|ref|ZP_01167521.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
gi|89081182|gb|EAR60416.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
Length = 402
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 30 EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
E P S L M + SP VI + + L ++ N + VL++++ G
Sbjct: 116 EKPSSNMLPADMM--KLSPSQKHVIVVDTRLSRLFLF-ENQNGVPVLVEDFYASYGRGGT 172
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPN--SKY-FLSINIGFPNEFDKAHNRTGADLMIHGE 146
G K++ GD + P G Y+I + S+Y ++ I +PN +D+ +TG + +HG
Sbjct: 173 G-KVKQGDLKTPLGVYFITNRLEDEKLPSRYGSGALPINYPNVWDQRLGKTGNGIWLHGS 231
Query: 147 CA---------SAGCYAMNNKQ 159
S GC ++ N
Sbjct: 232 PVETYSRPPKASEGCISLTNPD 253
>gi|157415163|ref|YP_001482419.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni
81116]
gi|157386127|gb|ABV52442.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747806|gb|ADN91076.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
M1]
gi|315932612|gb|EFV11543.1| hypothetical protein CSU_0096 [Campylobacter jejuni subsp. jejuni
327]
Length = 325
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|119897349|ref|YP_932562.1| hypothetical protein azo1058 [Azoarcus sp. BH72]
gi|119669762|emb|CAL93675.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 398
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 18/167 (10%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
G L +A ++ + P + + L ++ RN + + +
Sbjct: 103 GLREEAILRLRAYRERPPTEVVPRYLMQMGPDQRYAVVVDTRRARLYVY-RNDNGKPRFV 161
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGW---NNLNPNSKYFLS--INIGFPNEFDK 132
+Y K+ GD + P G Y++ P+ ++ S + +PN++DK
Sbjct: 162 ADYYASHGKAGA-EKMREGDNRTPLGVYHVTSFIEPKRLPD--FYGSGAFPLNYPNDWDK 218
Query: 133 AHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
RTG + +HG + S GC + N+ + + V
Sbjct: 219 RLGRTGHGIWLHGTPSDTYSRPPKASEGCVVLTNQDFTSLSSYVEPG 265
>gi|153952096|ref|YP_001398022.1| hypothetical protein JJD26997_0906 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939542|gb|ABS44283.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 325
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIKKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|283956251|ref|ZP_06373731.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791971|gb|EFC30760.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 325
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ K + IL ++ ++ +I +G G K GD + P GFY +G
Sbjct: 67 IVLANKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKF 123
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
NP Y+ + +PN DK +TG + IHG + GC A+ N ++
Sbjct: 124 NPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLE 183
Query: 162 EIYAIVRD 169
+ +V+D
Sbjct: 184 KFAQVVQD 191
>gi|86152147|ref|ZP_01070359.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|85840932|gb|EAQ58182.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
Length = 325
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAQV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|42522629|ref|NP_968009.1| hypothetical protein Bd1075 [Bdellovibrio bacteriovorus HD100]
gi|39575161|emb|CAE79002.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100]
Length = 332
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 6 NILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
LFAL + L G + S + E L ++ + + T F VI + K + L
Sbjct: 7 GCALFALSLPVLAGPAVTPS--SQIETDLLPASLLQISE--TEAFSRYVILVDKEQRKLS 62
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKY-FL 120
+++RN + + EY G K + D + PEG Y++ P S Y L
Sbjct: 63 VFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQPKIPFSLYGAL 120
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASA-------GCYAMNNKQMQEIYAIVR 168
+ +PN FDK N+TG+ + +H S GC + N ++++ ++
Sbjct: 121 AFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKKLADYIK 175
>gi|331003021|ref|ZP_08326533.1| hypothetical protein HMPREF0491_01395 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413065|gb|EGG92440.1| hypothetical protein HMPREF0491_01395 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 206
Score = 98.4 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 79/222 (35%), Gaps = 53/222 (23%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI----RI 56
M R +I+ F +F L G S S+ +S + + P P V+ RI
Sbjct: 1 MKARKSIVAFLVFSMLIG-LMSFSVYAATVTKVSTGSVN--FESGFGPGQPKVVEPSTRI 57
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
+ ++ E+ + A+ ++ ++ G K GD P G YYI N
Sbjct: 58 YVSKMAKEL---TLIADNKVVGKWPCSLGEFSANGTKQRQGDRTTPNGDYYICVR--NDK 112
Query: 116 SKYFLSINIGFPN--EFDKA--------------------------HNRTGADLMIHGE- 146
S Y LS+ + +P+ D+ + G +MIHG
Sbjct: 113 SAYHLSLGLSYPDKAAADRGFEQGIITQEEKDSIYTAIDSKLCPPWNTALGGAIMIHGNY 172
Query: 147 ---CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+AGC A+NN M ++ Q I++ P
Sbjct: 173 QKGVPTAGCVAVNNDVMDILWPY--------GQLGIKVSVGP 206
>gi|332530129|ref|ZP_08406078.1| erfk/ybis/ycfs/ynhg family protein [Hylemonella gracilis ATCC
19624]
gi|332040399|gb|EGI76776.1| erfk/ybis/ycfs/ynhg family protein [Hylemonella gracilis ATCC
19624]
Length = 432
Score = 98.4 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 19/169 (11%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW----KRNVD 71
L H + A + Q +P I + + L ++ + N
Sbjct: 123 LAELRHESEVRLAALRERPPAGAVPTQFLALAPNVRHAIAVDASRARLYLFENQAQANEG 182
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS--KYFLS--INIGFP 127
A L+ +Y + K GD + P G Y+ + L+ S ++ + + I +P
Sbjct: 183 ARMRLIADYYVSVGKYGI-EKTTEGDARTPLGVYF-TLHRLDKRSLPNFYGAGALPINYP 240
Query: 128 NEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIV 167
N D+ +TG+ + +HG A+ GC +++ ++ + V
Sbjct: 241 NILDRRRGKTGSGIWLHGTPPNQFARAPLATNGCVVLSDPDLEHVLRTV 289
>gi|148926588|ref|ZP_01810270.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845282|gb|EDK22376.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 325
Score = 98.4 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAKV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|205356391|ref|ZP_03223156.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345776|gb|EDZ32414.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 311
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 58 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 114
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 115 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAKV 174
Query: 167 VRD 169
V+D
Sbjct: 175 VQD 177
>gi|86150191|ref|ZP_01068418.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597483|ref|ZP_01100717.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562526|ref|YP_002344305.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85839307|gb|EAQ56569.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190075|gb|EAQ94050.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360232|emb|CAL35027.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284926140|gb|ADC28492.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315929852|gb|EFV09015.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
305]
Length = 325
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKFAKV 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|221066750|ref|ZP_03542855.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
gi|220711773|gb|EED67141.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
Length = 438
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 14/165 (8%)
Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75
L G H + + E I + I I +++ L ++ N D +
Sbjct: 141 LAGLHDEIRRRVQGADSVPETGSIPSEFLMLDASVRQAIAIDASKSRLYLFA-NEDGRFR 199
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFL--SINIGFPNEFDK 132
++ + + G K E GD++ P+G Y+IG +++ ++ + +PN++D+
Sbjct: 200 VVGNFYVSVGKLGLG-KKEEGDQRTPQGLYFIGRQIPGMKLPEFYGLGALTMNYPNDWDR 258
Query: 133 AHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168
R+G+ + +HG AS GC + N + + V
Sbjct: 259 VVGRSGSGIWLHGTPPDQYARLPEASDGCVVLANPDLDFLMQTVE 303
>gi|283954467|ref|ZP_06371987.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794084|gb|EFC32833.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp.
jejuni 414]
Length = 325
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + IL ++ ++ +I +G G K GD + P GFY +G NP
Sbjct: 72 KTDKILRVYFYEDGKIRKDFEQKEI--ITGLMGNKKTEGDLKTPVGFYELG-RKFNPGDP 128
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ I
Sbjct: 129 YYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRIDEFKTRGCIALFNNNLEKFAQI 188
Query: 167 VRD 169
V+D
Sbjct: 189 VQD 191
>gi|253999957|ref|YP_003052020.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4]
gi|253986636|gb|ACT51493.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4]
Length = 404
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 18/174 (10%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+ P VI + +++ L ++ +N+ + + +Y + K GD++ P G
Sbjct: 138 QIDPTQKYVIVVDADKSRLYLY-QNIGGKPTYVADYYVTIGRNGS-EKSSEGDKRTPLGV 195
Query: 105 YYIGWNNLNPNSKYFLS--INIGFPNEFDKAHNRTGADLMIHGECA---------SAGCY 153
Y + ++ S + +PNE+D+ + G + +HG + S GC
Sbjct: 196 YTASSKLTSKLPDFYGSAAYPLSYPNEWDRQQGKKGHGIWLHGTPSNTYSRPPRASDGCV 255
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
++N ++ + I L+ I + + +T + Q W
Sbjct: 256 VISNPDLETLGPI----LQQGGTPFIIVSQLKW-VTQAAPEQPQLQKALDQWRQ 304
>gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
RM3195]
gi|57016903|gb|EAL53685.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
RM3195]
Length = 316
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 26/184 (14%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+++ KN+ IL+++ ++ ++ +G G K + GD + P GF
Sbjct: 50 GYYTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEV--ITGLMGDKEKEGDLKTPVGF 107
Query: 105 YYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCY 153
Y +G NP +Y+ + +PN DK ++TG + IHG + GC
Sbjct: 108 YELGM-KFNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCI 166
Query: 154 AMNNKQMQEIYAIV-----------RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202
A+ N ++++ IV +D++R + + A F + N
Sbjct: 167 ALFNDKLEDFAKIVAGKKVYVLTEEKDNVRAKKEEIASLMADLFAW-KYAWTVSDVNAYL 225
Query: 203 SFWN 206
+F++
Sbjct: 226 AFYD 229
>gi|313201930|ref|YP_004040588.1| erfk/ybis/ycfs/ynhg family protein [Methylovorus sp. MP688]
gi|312441246|gb|ADQ85352.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. MP688]
Length = 404
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 18/174 (10%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+ P VI + +++ L ++ +N+ + + +Y + K GD++ P G
Sbjct: 138 QIDPTQKYVIVVDADKSRLYLY-QNIGGKPTYVADYYVTIGRNGS-EKSSEGDKRTPLGV 195
Query: 105 YYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCY 153
Y + ++ + + +PNE+D+ + G + +HG + S GC
Sbjct: 196 YTASSKLTSKLPDFYGRAAYPLSYPNEWDRQQGKKGHGIWLHGTPSNTYSRPPRASDGCV 255
Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207
++N ++ + I L+ I + + +T + Q W
Sbjct: 256 VISNPDLETLGPI----LQQGGTPFIIVSQLKW-VTQAAPEQPQLQKALDQWRQ 304
>gi|300311193|ref|YP_003775285.1| hypothetical protein Hsero_1868 [Herbaspirillum seropedicae SmR1]
gi|300073978|gb|ADJ63377.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 399
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
RSL +K + L ++ + + + + V+ + + + ++ N E ++ I
Sbjct: 112 RSLQEKPDPNLIPKAVLQVGEDQKN-----VLVVDTTRSRMYVY-ENQGGELKFQTDFYI 165
Query: 83 CAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPN-SKYFL--SINIGFPNEFDKAHNRTG 138
G FG K ++GD++ P G YY+ P ++ ++ + +PNE+DK + R+G
Sbjct: 166 S--QGRFGANKSKSGDQRTPIGVYYVNNRIPGPKLPDFYGTGALPLSYPNEWDKRNGRSG 223
Query: 139 ADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDS 170
+ +HG +S GC + N +Q +Y+
Sbjct: 224 YGIWLHGTPSDNFSRPPLSSDGCVVLANPDLQSLYSTAEVG 264
>gi|326317613|ref|YP_004235285.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374449|gb|ADX46718.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 437
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + + + L +++ L+ +Y K GD++ P G Y+I
Sbjct: 178 IAVDASRSRLYLFQNTEQG-MELIADYYASVGKLGI-EKALEGDQRTPLGVYFITSRLDP 235
Query: 114 PNSK-YFLS--INIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
K ++ + + I +PN D + +TG+ + +HG ++ GC A+ N ++
Sbjct: 236 ATLKDFYGAGALPINYPNPLDVSRGKTGSGIWLHGTPPEQFSRAPLSTDGCLALANPDLE 295
Query: 162 EIYAIVR 168
I V
Sbjct: 296 RILRTVE 302
>gi|120610990|ref|YP_970668.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1]
gi|120589454|gb|ABM32894.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1]
Length = 437
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + + + L +++ L+ +Y K GD++ P G Y+I
Sbjct: 178 IAVDASRSRLYLFQNTEQG-MELIADYYASVGKLGI-EKALEGDQRTPLGVYFITSRLDP 235
Query: 114 PNSK-YFLS--INIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
K ++ + + I +PN D + +TG+ + +HG ++ GC A+ N ++
Sbjct: 236 ATLKDFYGAGALPINYPNPLDVSRGKTGSGIWLHGTPPEQFSRAPLSTDGCLALANPDLE 295
Query: 162 EIYAIVR 168
I V
Sbjct: 296 RILRTVE 302
>gi|315638692|ref|ZP_07893866.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
JV21]
gi|315481316|gb|EFU71946.1| conserved hypothetical secreted protein [Campylobacter upsaliensis
JV21]
Length = 323
Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 26/184 (14%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+++ KN+ IL+++ ++ ++ +G G K + GD + P GF
Sbjct: 57 GYYTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEV--ITGLMGDKEKEGDLKTPVGF 114
Query: 105 YYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCY 153
Y +G +P +Y+ + +PN DK ++TG + IHG + GC
Sbjct: 115 YELGM-KFSPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCI 173
Query: 154 AMNNKQMQEIYAIV-----------RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202
A+ N ++++ +V +DS+R + + A F + N
Sbjct: 174 ALFNDKLEDFAKVVAGKKVYVLTEEKDSVRAKKEEIASLMADLFAW-KYAWTVSDVNAYL 232
Query: 203 SFWN 206
+F++
Sbjct: 233 AFYD 236
>gi|157163935|ref|YP_001466517.1| 60 kDa chaperonin (protein Cpn60; groEL protein) [Campylobacter
concisus 13826]
gi|112800637|gb|EAT97981.1| putative periplasmic protein [Campylobacter concisus 13826]
Length = 321
Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 63/182 (34%), Gaps = 35/182 (19%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------------------KRTS 47
ILLF FI L C +++ + +I +++K
Sbjct: 3 KILLF--FIALAPCLFAQNYEEIYLKNGPSAVIEAIEKNILSKDYWLEKLKDKDVRYGYY 60
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
+ + K + LE+ L G G K+ GD + P G Y +
Sbjct: 61 DNEILLSVVDKTDKELEVISYKDGVTKKLFSS---SVIVGKNGDKLLEGDLKTPVGVYQL 117
Query: 108 GWNNLNPNSKY--FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156
PN +Y L+ ++ +PN DK R G+ + IHG + GC AM
Sbjct: 118 T-RRFTPNDRYLGPLAFSLSYPNLLDKLSKRNGSGIWIHGYPLDGQRTDELKTKGCVAMQ 176
Query: 157 NK 158
N
Sbjct: 177 ND 178
>gi|223038983|ref|ZP_03609275.1| 60 kDa chaperonin [Campylobacter rectus RM3267]
gi|222879956|gb|EEF15045.1| 60 kDa chaperonin [Campylobacter rectus RM3267]
Length = 313
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K + GD + P G Y I + P ++ L++++ +PN DKA +TG + IH
Sbjct: 87 GKSGDKFKEGDLKTPVGVYDI-IDKFTPPDPFYGPLAMSLSYPNAHDKAAKKTGGGIWIH 145
Query: 145 GEC---------ASAGCYAMNNKQMQEIYAIVRD 169
G + GC A +N + + ++ D
Sbjct: 146 GLPMNGKREDEVRTRGCVAFDNDALVKFGKLIGD 179
>gi|222824134|ref|YP_002575708.1| hypothetical protein Cla_1135 [Campylobacter lari RM2100]
gi|222539356|gb|ACM64457.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 323
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 32/191 (16%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ I+ ++ N + + +G G K GD + P GFY +G P
Sbjct: 71 KSDKIIRVYHYNDGKVEKKFIQKDVL--TGLAGDKEIEGDLKTPIGFYELG-KKFYPGDP 127
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166
Y+ + +PN DK +TG + IHG + GC A+ N +++ +
Sbjct: 128 YYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAVQNDLLEDFNKL 187
Query: 167 VRD-----------SLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML------K 209
V D +R N + + A F + Q + SF++ K
Sbjct: 188 VADRKSYAMTEEKNKVRANHEEVAILLANLFAW-KDSWQKSDISKYLSFYDQKIFKHNNK 246
Query: 210 LGHDYFEKNHQ 220
++ F KN Q
Sbjct: 247 FSYEQFAKNKQ 257
>gi|328953401|ref|YP_004370735.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
gi|328453725|gb|AEB09554.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
Length = 215
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 53/223 (23%)
Query: 1 MTNRYNIL-LFALFIFLNGCHHSRSLID---------------------KAEHPLSENLI 38
M + L + AL + GC + L+ +A+ + + ++
Sbjct: 1 MRRIWLFLGVAALLFVMGGCSSQKPLVTAVPPEEMEADIEEEENIDPRYRADQRVVKEVL 60
Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
R PTV+ + K L +++ LK Y + K+ GD
Sbjct: 61 QE-NHYRKRGKKPTVLLVHKESRKLTVFRGTTP-----LKTYPVVLGRNPRNDKLRQGDM 114
Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPN-------EFDKAHNR------TGADLMIH- 144
PEG Y + P++K+ I + +P K + G ++ IH
Sbjct: 115 CTPEGIYKVVCKF--PHAKWNKFILLNYPTTKNWLKFAEAKKRGKIPITADIGGEIGIHG 172
Query: 145 ---------GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
GE + GC ++ NK + EIY ++ D +Q
Sbjct: 173 TEDDLKNLTGENWTLGCVSLRNKHLDEIYPLIEDGSLVVIQRK 215
>gi|331007095|ref|ZP_08330318.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989]
gi|330419090|gb|EGG93533.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989]
Length = 312
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M NI L L + + +H + ++ + +P VI +
Sbjct: 1 MITIRNIFLGLLLFSSMVSAETPDFSLQPDHTMQPASLVDIAD-----SYPHVIISELST 55
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYF 119
L ++KR D ++LL+ +G K GD + P G Y I + ++
Sbjct: 56 GKLYVYKRQADGSFLLLETMHTSIGKKGYG-KNIEGDNKTPVGVYRITSHLTPEQLDAFY 114
Query: 120 L--SINIGFPNEFDKAHNRTGADLMIHGEC-----------ASAGCYAMNNKQMQEI 163
+ + +PN +DK + RTG + +H E S GC ++N + I
Sbjct: 115 GNAAYPVNYPNAWDKINERTGYGIWLHAEPIGLTTKTRPLLDSNGCIVLSNNDIDII 171
>gi|154174131|ref|YP_001408672.1| putative periplasmic protein [Campylobacter curvus 525.92]
gi|112802069|gb|EAT99413.1| putative periplasmic protein [Campylobacter curvus 525.92]
Length = 321
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 15/114 (13%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
+ K + LE+ + + I G G K+ GD + P G Y + P+
Sbjct: 69 VDKTDKKLEVLSYDNGKLERVFDTGVIV---GKSGDKLLEGDLKTPVGVYQLT-RRFTPS 124
Query: 116 SKY--FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNK 158
Y L+ ++ +PN DK R G + IHG + GC AM N
Sbjct: 125 DPYLGPLAFSLSYPNLLDKLAKRNGGGIWIHGYPLDGQRTDELKTKGCVAMEND 178
>gi|258406579|ref|YP_003199321.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM
5692]
gi|257798806|gb|ACV69743.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM
5692]
Length = 304
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 26/163 (15%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M +R+ +L A F+ C P+S + + K E
Sbjct: 1 MGHRFALLAGAWTTFIL-CFFPSPAPGWEVPPVSPEH-----------GPACFLVVEKAE 48
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF- 119
L +W + V ++ S G K GD PEG Y++ K +
Sbjct: 49 QRL-VWTNATSTQLV----WQCSTGSSG-GDKWREGDLATPEGVYFMTRRQTGLPEKLYG 102
Query: 120 -LSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAM 155
L+ + +PN D+ +TG + +HG + GC A+
Sbjct: 103 NLAFPLNYPNPVDRLRGKTGYGIWLHGRGKPLVPRDTRGCIAL 145
>gi|313681853|ref|YP_004059591.1| erfk/ybis/ycfs/ynhg family protein [Sulfuricurvum kujiense DSM
16994]
gi|313154713|gb|ADR33391.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfuricurvum kujiense DSM
16994]
Length = 317
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K + +LE++ + + L K Y G K GD + P G Y + +
Sbjct: 67 KEKGVLELYTPDAQKRFYLKKRYSAFTGKN-AGDKSVAGDLKTPIGIYTLVEKKKRVD-P 124
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHG-------ECASAGCYAMNNKQMQEIYA--- 165
++ ++ +PN +D+ + G + +HG + + GC A+NN + ++
Sbjct: 125 FYGPMAFVTSYPNLYDRVRGKNGTGIWVHGVPLSGTRDPFTKGCIAINNNDLIQLDQTIN 184
Query: 166 ------IVRDSLRGNMQS 177
I+ SL+ +Q
Sbjct: 185 PSNTLLIIDSSLKQGIQP 202
>gi|268316179|ref|YP_003289898.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
gi|262333713|gb|ACY47510.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
Length = 388
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 23/136 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I + K +++ + L + I G K GD PEG Y +
Sbjct: 234 LIVVDKMARQCLVYRGDRQ-----LAVFPIELGPNWMGSKHYAGDRATPEGRYRVVRKLG 288
Query: 113 NPNSKYFLSINIGFPNEFDKAH-------------NRTGADLMIHGE-----CASAGCYA 154
++Y+ ++ + +PN D+A + G + IHGE + GC A
Sbjct: 289 PGETRYYRALLLDYPNAEDRARFARARREGLLPPGAKIGGLIEIHGEGGRGADWTEGCVA 348
Query: 155 MNNKQMQEIYAIVRDS 170
++N+ M+ +Y ++
Sbjct: 349 LHNQDMRRLYEMIPVG 364
>gi|91774853|ref|YP_544609.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
gi|91708840|gb|ABE48768.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
Length = 404
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
SP + + ++ L ++ +N D++ L +Y I K GD++ P G Y
Sbjct: 137 MSPEQRYAVVVDTTKSRLYVY-QNRDSQLHHLVDYYITMGKNGS-EKFTEGDKRTPLGIY 194
Query: 106 YIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYA 154
+ ++ + + +PN DK H + G + +HG AS GC
Sbjct: 195 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 254
Query: 155 MNNKQMQEIYAIVRDS 170
+ N ++ + +++
Sbjct: 255 IANPDIKALAPVLQQG 270
>gi|224370133|ref|YP_002604297.1| putative ErfK family protein (precursor) [Desulfobacterium
autotrophicum HRM2]
gi|223692850|gb|ACN16133.1| putative ErfK family protein (precursor) [Desulfobacterium
autotrophicum HRM2]
Length = 347
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 23/162 (14%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
L+F + I G + + E + P + + K+ L ++
Sbjct: 23 LMFGVQIVFAGANEPGESDTRPEGLI------------LVPMGMNAVVVEKSSQQLFLFS 70
Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-GWNNLNPNSKYF--LSINI 124
+ Y ++ + G K+++GD++ PEG Y++ S + +
Sbjct: 71 SDSQGVYERMRV-PCSTGASP-GRKLKSGDQKTPEGVYFLTDAYEDRYLSAVYGKKAFPT 128
Query: 125 GFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQM 160
+PN D+ R G+ + +HG S GC AMNN+ +
Sbjct: 129 DYPNFIDRRKGRDGSAIWLHGTNKPLKPMDSNGCVAMNNQDI 170
>gi|319762809|ref|YP_004126746.1| erfk/ybis/ycfs/ynhg family protein [Alicycliphilus denitrificans
BC]
gi|330824889|ref|YP_004388192.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
K601]
gi|317117370|gb|ADU99858.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
BC]
gi|329310261|gb|AEB84676.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans
K601]
Length = 456
Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNNL 112
I + + + L ++ N D VL+ +Y G G K GD++ P G YYI
Sbjct: 197 IAMDASRSRLYLF-ENTDKGLVLVADYYASV--GKLGTEKQAEGDQRTPLGVYYITSRLD 253
Query: 113 NPNSK-YFLS--INIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160
K ++ + + I +PN D +TG+ + +HG A+ GC + N +
Sbjct: 254 PATLKDFYGAGALPINYPNPLDLRRGKTGSGIWLHGTPPSQFSRAPLATDGCLVLANPDL 313
Query: 161 QEIYAIVR 168
+ + V
Sbjct: 314 ERLLKTVE 321
>gi|268315962|ref|YP_003289681.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
gi|262333496|gb|ACY47293.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
Length = 241
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 47/156 (30%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG------DEQAPEGFY 105
+R+ K + L +++ L++ + + + F K G D + PEG +
Sbjct: 83 VWLRVSKRQRRLFVYRGT-----RLVRSFPVDLGTNPFSDKTRRGSVASPDDWRTPEGVF 137
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----------RT----------------- 137
Y+ N S+Y+ ++ + +P D R
Sbjct: 138 YVAAK--NARSQYYRALVLNYPTADDALRGLREGLISEAEYRAIVEAEANFRMPPMNTAL 195
Query: 138 GADLMIHGE------CASAGCYAMNNKQMQEIYAIV 167
G + IHG+ + GC A+ N+ + I+ +V
Sbjct: 196 GGWIEIHGDGTGQQVTWTQGCVALRNEDLDAIWPLV 231
>gi|256830867|ref|YP_003159595.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
4028]
gi|256580043|gb|ACU91179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
4028]
Length = 409
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 61/177 (34%), Gaps = 24/177 (13%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R IL+ A L + P + P + +
Sbjct: 1 MDTRTFILIAAFLSLLFAAPARPQSWTASLAPHPKA-------------PPLFMAVDMAR 47
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSK 117
+ RN D E +K+ G K+ GD + PEG Y++ L+ +S
Sbjct: 48 QRAFV-VRNKDGELKKMKDMSCTTGMHGGG-KLLEGDRKTPEGVYFLQGKATGGLDFDSF 105
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECAS------AGCYAMNNKQMQEIYAIVR 168
+ + +PN D+ +TG +MIHG S GC + N + + VR
Sbjct: 106 GNTAFPLNYPNPVDRIQGKTGNGIMIHGRGRSFGPRQTLGCVVLENDDVDTLDRHVR 162
>gi|118474716|ref|YP_892715.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
gi|118413942|gb|ABK82362.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
Length = 322
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K+ GD + P G Y I P Y+ ++ N+ +PN FDK +RTG + IH
Sbjct: 97 GLMGDKLLEGDLKTPVGVYEIT-RRFVPEDTYYGPVAFNLSYPNLFDKLRDRTGGGIWIH 155
Query: 145 GEC----------ASAGCYAMNNKQMQEIYAIVRD 169
G + GC M N + + +I++D
Sbjct: 156 GFPLNGNIREDVYKTKGCVVMPNDLLLNLESILKD 190
>gi|301166595|emb|CBW26171.1| putative periplasmic protein [Bacteriovorax marinus SJ]
Length = 346
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 23/136 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
V+ K+ + L ++K N + L+ +Y + G K+ GD + PEG Y + L
Sbjct: 39 VVLAEKSTHTLYLFK-NENGNPQLVNKYPMATGK-KAGDKLFQGDHRTPEGIYSFT-DFL 95
Query: 113 NPNSKYFL-----------SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGC 152
+ + +PN DK + +TG + +H S GC
Sbjct: 96 THQDLLNRHGKQGQIYGVGAFVMNYPNPIDKRNGKTGGGIWLHSTNDETRIDKGLDSRGC 155
Query: 153 YAMNNKQMQEIYAIVR 168
N + E+ +
Sbjct: 156 VVATNSNLIELSKFIE 171
>gi|255527509|ref|ZP_05394378.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
gi|255508814|gb|EET85185.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
Length = 220
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 39/163 (23%)
Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99
K+ + I+++K +LE++ + L+ +KI G K + GD +
Sbjct: 58 LFFNKKDAVAEKASIKVYKKRRVLELYSSD-----KLVGRFKIGLGRSPEGYKEKEGDNK 112
Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL------------------ 141
PEG YYI + N N+KY I I +PN D +
Sbjct: 113 TPEGSYYICYR--NGNTKYTYFIGISYPNIEDAKRGLQQGLINEAVYKRIERAINNKKQP 170
Query: 142 --------------MIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+ S GC A+ ++ + + +
Sbjct: 171 PWNTPLGGEIGLHGGGNKYDWSYGCIALTDEDINILKQYAPNG 213
>gi|292492146|ref|YP_003527585.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
gi|291580741|gb|ADE15198.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
Length = 212
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 50/163 (30%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + K++ +L + K ++K+Y + G G K GD++ PEG Y I +
Sbjct: 29 PYEIIVIKSKRLLVVKKGT-----RVIKKYHVALGQGGIGGKRVEGDKRTPEGEYEIVGS 83
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADL----MIH---------GEC---------- 147
P+ K++ I++ +P D + +IH G
Sbjct: 84 W--PSRKFYYFIHLNYPGRQDAMAGYKKGLISWEELIHIYRAHQEQNGTPPQQTRLGGFI 141
Query: 148 --------------------ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC A+ N ++ E+ +
Sbjct: 142 GIHGIGEETNQKLAIHQDFDWTRGCIALTNTEIDELRQFIGPG 184
>gi|315650366|ref|ZP_07903438.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315487477|gb|EFU77787.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 201
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 71/221 (32%), Gaps = 56/221 (25%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M R + + + L G + + + ++ P RI+ ++
Sbjct: 1 MKIRKSFVAAPVLSMLIGLMSFNAYAATVRKVTTSSYTPVSLQQSVEPS----TRIYVSK 56
Query: 61 NILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
E+ + A+ ++ ++ G K + GD P G YYI N S Y
Sbjct: 57 MSKEL---TLIADNKVVGKWPCSLGEFSANGTKKKQGDRTTPNGDYYICVR--NDKSAYH 111
Query: 120 LSINIGFPNEFDKAHNR-------------------------------TGADLMIHGEC- 147
LS+ + +P DKA G +MIHG
Sbjct: 112 LSLGLSYP---DKAAADRGFESGIISKEEKDTIYSAIDRKVCPPWDTALGGAIMIHGNYQ 168
Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+AGC A+++ M ++ Q I++ P
Sbjct: 169 KGIPTAGCVAVSDDVMDILWPY--------GQLGIKVSVGP 201
>gi|149926797|ref|ZP_01915056.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105]
gi|149824349|gb|EDM83567.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105]
Length = 422
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77
+++ D+ + L ++ + + VI + + L +++ + + L+
Sbjct: 136 AIARFKAVKDRPQRDLLPAELVELNDDQRY-----VILVDTTRSRLFLYENSFP-QPRLV 189
Query: 78 KEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNNLNPN-SKYF--LSINIGFPNEFDKA 133
++ + G G K+ GD++ P G Y I + ++ +++ I +PN +DK
Sbjct: 190 TDFYVS--QGKMGAVKVREGDKRTPIGVYTITELLPKEKLTDFYGPIALPIDYPNAWDKR 247
Query: 134 HNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIV 167
+TG + +HG S GC + N+ + + V
Sbjct: 248 LGKTGYGIWLHGMPKHYVSRPPKASDGCVVLANQDLLALKKFV 290
>gi|78486093|ref|YP_392018.1| ErfK/YbiS/YcfS/YnhG [Thiomicrospira crunogena XCL-2]
gi|78364379|gb|ABB42344.1| Hypothetical protein Tcr_1752 [Thiomicrospira crunogena XCL-2]
Length = 375
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P ++ + + L ++++N + Y + Y + G K GD + P G Y I
Sbjct: 144 EPYLVIVDSAAHRLYLYQKNENG-YEEVANYYVSIGQKGTG-KQVRGDLKTPIGIYKIEK 201
Query: 110 ---NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNN 157
++ P ++ + +PN +DK RTG+ + +HG AS GC +NN
Sbjct: 202 ELSDSKLPELYGVAALTLNYPNSWDKQKGRTGSGIWLHGTPRSTYSRPPLASRGCVVLNN 261
Query: 158 KQMQEI---YAIVRD 169
MQ + Y +
Sbjct: 262 PAMQTLIYQYRLAPA 276
>gi|237752719|ref|ZP_04583199.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376208|gb|EEO26299.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 324
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 26/171 (15%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC 147
G K + GD P G Y + +N + +Y+ L+ +PN +D+ RTG + IHG
Sbjct: 104 GHKEKEGDLATPIGVYSLNARLVNLD-QYYGPLAFATNYPNLYDRLQKRTGYGIWIHGMP 162
Query: 148 --------ASAGCYAMNNKQMQEIYAIV----------RDSLRGNMQSHIQIQAFPFRMT 189
+ GC A+ N ++ + A++ +S + + + I +
Sbjct: 163 LDGNRKELNTRGCIAIENDKLSSVDALINYRQALLITFENSFKEVKKEDLSILLADLYVW 222
Query: 190 SKNMQLYQNNPNYSFWNM--LK---LGHDYFEKNHQEPFIQIINKQYVFFK 235
+ F++ ++ +D F +N + F + K+ VF +
Sbjct: 223 KDAWKESNIEKYLEFYSKDFIRFDGNKYDDFAQNKRRIFAKNEKKEIVFSQ 273
>gi|160897527|ref|YP_001563109.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1]
gi|160363111|gb|ABX34724.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1]
Length = 499
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 16/120 (13%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG-PKIETGDEQAPEGFYYIGWNNL 112
I I +++ L ++ L+ ++ + G G K + GD++ P G Y++G +
Sbjct: 243 IAIDASKSRLYLFAHEAGG-LRLVGDFYVSV--GKLGTDKWQEGDQRTPLGIYFVGRHIP 299
Query: 113 NPN-SKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160
P +++ ++ + FPN++DKA R+G+ + +HG AS GC + N +
Sbjct: 300 GPRLPEFYGKGALTVNFPNDWDKAVGRSGSGIWLHGSPPDQFSRAPEASDGCLVLANPDL 359
>gi|325294451|ref|YP_004280965.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064899|gb|ADY72906.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 353
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72
+ + S+ + + + LI ++ P I + K IL + K +
Sbjct: 54 LLLFSYAGESKEVRKLIKKAYPKRLISNVL---ILPPSINAIIVDKTREILYVIKMDKS- 109
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY-IGWNNLNPNSKYFLSINIGFPNEFD 131
++K++ C G K+E GD + PEG Y+ + W P + + +PN D
Sbjct: 110 IPHVIKKFP-CITGKKLGDKLEEGDLRTPEGIYFPLYWRTNLPKLYGIGAFPLNYPNLID 168
Query: 132 KA-HNRTGADLMIHGEC-------ASAGCYAMNNKQMQEIYAIV 167
K R G + IHG ++ GC + N+ ++E+ ++
Sbjct: 169 KKVLKRNGHGIWIHGTNDPNRPPHSTNGCIVLKNEYLKELKKLI 212
>gi|153953429|ref|YP_001394194.1| hypothetical protein CKL_0793 [Clostridium kluyveri DSM 555]
gi|219854053|ref|YP_002471175.1| hypothetical protein CKR_0710 [Clostridium kluyveri NBRC 12016]
gi|146346310|gb|EDK32846.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567777|dbj|BAH05761.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 220
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 41/167 (24%)
Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99
KK T I+I+K + I+E++ + L+ +K+ G K GD +
Sbjct: 58 LFFKKPEKFPDTTFIKIYKEKRIMELY-----GDNKLIGRFKMALGRVPQGKKQREGDNK 112
Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL----------MIHGE--- 146
PEG YYI + +N +KY + I +PN D + I +
Sbjct: 113 TPEGNYYICY--INSKTKYKYFLGISYPNIQDAKWALDEGVIDNNTFQKIEKAIENKKQP 170
Query: 147 -------------------CASAGCYAMNNKQMQEI--YAIVRDSLR 172
+ GC A+++ M + Y VR S+
Sbjct: 171 PWNTPLGGAIGIHGGGTDYDWTYGCIAISDNDMDILKQYVFVRTSVE 217
>gi|194332931|ref|YP_002014791.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271]
gi|194310749|gb|ACF45144.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271]
Length = 122
Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M Y I + A + L H + S +S+ P + + K++
Sbjct: 3 MRVFYTIAVVATLLCLAQRAHRSKAVAAENSKSSSLQTLSL------PVEADSLVVSKDD 56
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L ++ ++ ++K Y I G K GD + PEG Y I NP S+Y L
Sbjct: 57 RLLHLY-----SDGAVVKSYTIALGFSPRGAKRYLGDGRTPEGRYTII--GRNPQSRYHL 109
Query: 121 SINIG 125
S++I
Sbjct: 110 SLSIS 114
>gi|237804047|ref|ZP_04591632.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237805685|ref|ZP_04592389.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331026028|gb|EGI06084.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331026793|gb|EGI06848.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 88
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 21/83 (25%)
Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC-------------- 147
+ W P++ Y LS++I +PN D A R G+ +MIHG
Sbjct: 1 LDWRK--PSNNYNLSMHISYPNITDSARARNEGVKPGSMIMIHGTPVDEEYPEWYFHTLD 58
Query: 148 ASAGCYAMNNKQMQEIYAIVRDS 170
+ GC AM N M+E++ +V+D
Sbjct: 59 WTNGCIAMKNNDMREVWDLVKDG 81
>gi|313673241|ref|YP_004051352.1| erfk/ybis/ycfs/ynhg family protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939997|gb|ADR19189.1| ErfK/YbiS/YcfS/YnhG family protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 471
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 61/174 (35%), Gaps = 30/174 (17%)
Query: 1 MTNRYNILLFALFIFL--NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58
MT I L I L N + S+ + + + + K IR
Sbjct: 1 MTKISRIFFSLLIILLCHNAVYASKKIFADVMAKGVDKEKVFLVDKGMKKSFLVEIR--- 57
Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118
D VL+KE+ G K+ GD++ P G YY+ P SK
Sbjct: 58 ------------DDLPVLIKEFDDVIVGEGNGDKLREGDKKTPTGVYYVI--GFIPQSKL 103
Query: 119 FL-----SINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQ 161
+ + +PN DK + +TG + IHG S GC + N+ +
Sbjct: 104 DKIYGTGAFPLNYPNFVDKLYGKTGHGIWIHGRDPLEKKQVSKGCVVLKNEDIN 157
>gi|78358053|ref|YP_389502.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220458|gb|ABB39807.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 442
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 42/227 (18%)
Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64
++L+F F L H + A L P + + K+ L
Sbjct: 22 ASLLIFLTFCILPAAHAHAGGWNAAIGELPH-------------LPPRFVAVDKSRQTLF 68
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL---- 120
++ + + Y C G K GD + PEG Y++ + ++ + L
Sbjct: 69 LY--RHSSPLEVSATYT-CTTGQATGDKQVEGDLRTPEGVYFVE-HRIDKGLDWDLYGGI 124
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGE------CASAGCYAMNNKQMQEIY--------AI 166
+ + +PN D +TG + IHG + GC A+N ++ + I
Sbjct: 125 AYTLNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADIEVLGPGLERGLPVI 184
Query: 167 VRDSLRG-NMQSHIQIQAFPFRMTSKNMQLY------QNNPNYSFWN 206
V + Q + A R+ ++ Q + +++ + F+
Sbjct: 185 VAQGVNATGAQPEAERGAATARLLAQRSQQWAAAWQARSDDFFDFYA 231
>gi|149194098|ref|ZP_01871196.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2]
gi|149136051|gb|EDM24529.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2]
Length = 319
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIH 144
G G K + GD + P G Y + N + P++ ++ L+ +PN FDK + + G + IH
Sbjct: 95 GKLGDKQKEGDLKTPIGNYTL-INKIKPSNTFYGPLAFVTSYPNLFDKLNKKNGYGIWIH 153
Query: 145 GEC-------ASAGCYAMNNKQMQEIYAIV 167
G+ S GC +NN +++ + ++
Sbjct: 154 GKPLDGERGDLSKGCIVLNNDEIKHLDTLI 183
>gi|283852469|ref|ZP_06369737.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
gi|283572077|gb|EFC20069.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
Length = 456
Score = 88.0 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 25/169 (14%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M +L A F+ + C + I+ M+ + + + K
Sbjct: 1 MKRTGRVLALACFLLVLPCRWAAGEW--------TADIVDMEASPSR-----FVAVDKKA 47
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSK 117
+ R LL CA G K + GD + PEG Y+I LN
Sbjct: 48 QSFALLSRQSP--LRLLAAIP-CATGQELGDKFKEGDLKTPEGVYFITRRKTAGLNYELY 104
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGE------CASAGCYAMNNKQM 160
L+ + FPN D ++G + IHG + GC A++ +
Sbjct: 105 GDLAFPLNFPNPADVVRRKSGHGIWIHGRGHAIIPYETQGCVALSTPDI 153
>gi|242280688|ref|YP_002992817.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM
2638]
gi|242123582|gb|ACS81278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM
2638]
Length = 424
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 56/171 (32%), Gaps = 24/171 (14%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIR-IFKN 59
M +Y +F I L S + E + P P I + K
Sbjct: 1 MGMKYFFRVFTAAILLLAGLTSLAFAKGWEPVIDPT-----------PLVPDYILAVDKE 49
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN-PNSKY 118
L + + CA G K+ GD + PEG Y+ N
Sbjct: 50 SQKLHLLVHKSPLHAE--ASFT-CATGQVAGDKVVEGDLKTPEGIYFTTGKRTGLKNYTL 106
Query: 119 F--LSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQ 161
+ ++ + FPN D+ +TG + IHG + GC A+ N M
Sbjct: 107 YGKMAFPLNFPNPVDRIKGKTGYGIWIHGRGKELVPMDTQGCVALVNSDMD 157
>gi|302343292|ref|YP_003807821.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075]
gi|301639905|gb|ADK85227.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075]
Length = 495
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVL 76
+ C +++ AE P S + + P +I + K+ ++K D
Sbjct: 33 SPCA-AQTQPAAAEQPTS-----FIYCYQGRVDDPAIIVVDKSLQRAMVFKYLGDMALQW 86
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAH 134
E+ C G K ++GD++ PEG Y+I + F ++++ +PN D
Sbjct: 87 --EFP-CGTGEKEGDKAQSGDQKTPEGVYFITHRYEDRKVTVFGDRALHLDYPNAIDCVD 143
Query: 135 NRTGADLMIHGEC------ASAGCYAMNNKQMQEIYAIVRD 169
R G + +HG +S GC ++N+ + + ++RD
Sbjct: 144 GRQGDGIYLHGTNRDLRPRSSNGCITLDNRDLARLSQMIRD 184
>gi|34557654|ref|NP_907469.1| hypothetical protein WS1291 [Wolinella succinogenes DSM 1740]
gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 322
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K + L +++ L G K GD + P G Y + +
Sbjct: 70 ADKALSELSLYQLGGKKPERLAHT--KALMGSKKGDKRIEGDLKTPIGVYDLTAKLTRLD 127
Query: 116 SKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEI 163
Y L+ +PN +D ++G+ + IHG + GC A++N+ ++ I
Sbjct: 128 QLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCIAIDNQLLKTI 183
>gi|319790530|ref|YP_004152163.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1]
gi|317115032|gb|ADU97522.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1]
Length = 355
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P I + K +L + + + +++++ G K+E GD++ PEG Y+
Sbjct: 88 PRDLHAIVVDKTNEVLYVIRMENGVPF-IVRKFPCITGKRP-GDKLEEGDQRTPEGIYFP 145
Query: 108 GWNNLNPNSKYFL-SINIGFPNEFDKA-HNRTGADLMIHGEC-------ASAGCYAMNNK 158
+ N Y + + + +PN D+ R G + IHG ++ GC + N+
Sbjct: 146 MYWETNLPPIYGIGAFPLNYPNLLDRKILKRNGHGIWIHGTNNPNRPPHSTNGCIVLKNE 205
Query: 159 QMQEIYAIV 167
++E+ ++
Sbjct: 206 YLRELKKLI 214
>gi|242309063|ref|ZP_04808218.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524487|gb|EEQ64353.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 331
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC 147
G K + GD P G Y + N + +Y+ L+ + +PN +DK RTG + IHG
Sbjct: 106 GHKQKEGDLATPIGVYSLQARLSNLD-QYYGPLAFSTSYPNLYDKLQKRTGYGIWIHGMP 164
Query: 148 --------ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 165 LNGNREELNTRGCIAIENN 183
>gi|302879533|ref|YP_003848097.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
gi|302582322|gb|ADL56333.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
Length = 387
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 28/151 (18%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP-KIETGDEQAPEGFYYIGWNN- 111
+ + + + L ++ NV E + ++ + G G K+ TGD++ P G Y+I N
Sbjct: 129 LVVDTSRSTLYVY-ENVKGEPRYVTDFYVTI--GKLGTEKVSTGDQRTPLGVYFIQANLP 185
Query: 112 LNPNSKYFLS--INIGFPNEFDKAHNRTGADLMIHGECA---------SAGCYAMNNKQM 160
N + + S + +PNE+DK +NRTG+ + +HG + S GC +NN +
Sbjct: 186 KNQLADMYGSGAFPLSYPNEWDKRNNRTGSGIWLHGTSSDTYSRPPRASNGCVVLNNDDL 245
Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
++ ++Q+ P +T+K
Sbjct: 246 NKLA------------PYLQVGITPVIITNK 264
>gi|163756857|ref|ZP_02163966.1| hypothetical protein KAOT1_10501 [Kordia algicida OT-1]
gi|161323246|gb|EDP94586.1| hypothetical protein KAOT1_10501 [Kordia algicida OT-1]
Length = 189
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 40/202 (19%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
+ LLF I L + SE + + +TS I I K++ L
Sbjct: 2 KAFTLLFVSLITLFCVQSCKRETANKNAKTSETTLKQLLPAKTS----IRILIDKSDYTL 57
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123
++ + L+K+Y + K + GD++ PEG + + + P+ + I
Sbjct: 58 SVFTADT-----LVKKYNVVFGGNPVDDKEKEGDKRTPEGVFGV--RDKYPHRSWSKFIW 110
Query: 124 IGFPNEFD-------KAHN------RTGADLMIHG------------ECASAGCYAMNNK 158
I +PN+ KA+ G ++ IHG + + GC +M N
Sbjct: 111 IDYPNKSSWKKFNQRKANGIIKEGETIGGEVGIHGVPEGMDHMIDTKQNWTLGCISMKNS 170
Query: 159 QMQEIYAIVRDSLRGNMQSHIQ 180
+ EIY + Q IQ
Sbjct: 171 DVNEIYPYIT----KKTQITIQ 188
>gi|300856075|ref|YP_003781059.1| hypothetical protein CLJU_c29090 [Clostridium ljungdahlii DSM
13528]
gi|300436190|gb|ADK15957.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 220
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 39/170 (22%)
Query: 30 EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
E + + T I+I+K + +E++ + L+ +K+
Sbjct: 48 EKDVQAEKGKLFFEAPKQKPEKTSIKIYKGKRAMELY-----GDNELIGRFKVGLGRVPS 102
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---RTGADLMI--- 143
G K + GD + PEG YYI + +NP SKY I +PN D + +
Sbjct: 103 GKKEKEGDLKTPEGTYYICY--INPKSKYDYFFGISYPNIDDAKEALDKKVIGKINYDRI 160
Query: 144 ------------HGE--------------CASAGCYAMNNKQMQEIYAIV 167
H + GC A++NK M + V
Sbjct: 161 EWAINNKEQPPWHTSLGGEIGIHGGGSKYDWTYGCIALSNKDMDILKEYV 210
>gi|116747988|ref|YP_844675.1| hypothetical protein Sfum_0541 [Syntrophobacter fumaroxidans MPOB]
gi|116697052|gb|ABK16240.1| hypothetical protein Sfum_0541 [Syntrophobacter fumaroxidans MPOB]
Length = 191
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 39/146 (26%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I ++K + L + + N VL+++Y I G K GD + PEG ++I +
Sbjct: 43 IFVYKEKRRLYVIQSN-----VLVRDYPIGLGPHPSGDKDRDGDGRTPEGDFFIIVKGSS 97
Query: 114 PNSKYFLSINIGFP-----------------------NEFDKAHNRT-----GADLMIHG 145
K S+ I +P D G + IH
Sbjct: 98 ERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSAPPSGTVLGGKIFIHA 155
Query: 146 ----ECASAGCYAMNNKQMQEIYAIV 167
+ + G A+ + M+E++ +
Sbjct: 156 GGAHKDWTDGSIALYDSDMEELFTVA 181
>gi|317154207|ref|YP_004122255.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944458|gb|ADU63509.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 419
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
P ++ + K L + +R ++ + C G K GD + PEG Y++G
Sbjct: 32 GPPRLVAVDKTAQTLIMLERQSP--LREIRRFP-CTTGQADGDKRVEGDLRTPEGVYFVG 88
Query: 109 WN--NLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQ 159
Y ++ + +PN D+ +TG + IHG + GC A+
Sbjct: 89 HRIKRKLEWGLYGDIAYALNYPNPVDRIKGKTGGGIWIHGRGKEFVPRDTQGCVALKVPD 148
Query: 160 MQEI 163
M+++
Sbjct: 149 MRDV 152
>gi|258517068|ref|YP_003193290.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257780773|gb|ACV64667.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 270
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 44/176 (25%)
Query: 31 HPLSENLIISMQKKR-TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
+++L + ++ T P+ I I K + L I +N LK Y + SG
Sbjct: 90 QSKAKSLKAILAERGITDPWSTLKIVINKTNHSLSIVYKNT-----WLKTYPVDIGSGGL 144
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS---INIGFPNEFDKAHN--------RTG 138
K GD + PEG +YI ++ + Y+L + + +PN D +TG
Sbjct: 145 ADKQVQGDLKTPEGTFYIAEKSVLSPADYYLGTRWMRLSYPNAEDAGRGVRQGLINSQTG 204
Query: 139 A---------------------------DLMIHGECASAGCYAMNNKQMQEIYAIV 167
D+ G+ + GC ++N +++ Y V
Sbjct: 205 DSIVNAINAGKIPPQRTALGGGVGIHGGDIPSFGKDWTWGCIGLSNGDVEDFYDYV 260
>gi|78777576|ref|YP_393891.1| hypothetical protein Suden_1379 [Sulfurimonas denitrificans DSM
1251]
gi|78498116|gb|ABB44656.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
1251]
Length = 321
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 69 NVDAEYVLLKEYKICAWSGT-FGPKIETGDEQAPEGFYYIGWNNLNPN--SKYF--LSIN 123
+ + + K+Y A++G G KI+ GD + P G Y I ++ +
Sbjct: 80 DENQNFKFKKKY--SAFTGKMKGDKIKEGDLRTPTGIYQITQKLSKETKLDPFYGPFAFV 137
Query: 124 IGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQ 161
+PN +D + G+ + IHG A + GC A+NN ++
Sbjct: 138 TSYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIE 181
>gi|291613141|ref|YP_003523298.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
gi|291583253|gb|ADE10911.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
Length = 388
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKR-------------TSPFHPTVI 54
LL A ++ + + L E + +Q+ + SP +
Sbjct: 71 LLLARSKPISSFGDAPNAPPNLVQDLREEANVRLQRAQEQQPIGVPKYLWQLSPQQRYAV 130
Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114
+ +++ L ++ NV+ E + ++ I K+ GD++ P G Y++ +
Sbjct: 131 VVDTSKSTLYLF-ENVNGEPRYVSDFYISVGKKGA-DKVSEGDQKTPLGVYFVNGHLGKD 188
Query: 115 N-SKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQ 161
+ ++ + + +PNE+DK G + +HG AS GC + N +
Sbjct: 189 KITDFYGPSAYPLSYPNEWDKREGHDGHGIWLHGTPPDTFSRPPRASNGCVVLANNDLN 247
>gi|239627720|ref|ZP_04670751.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517866|gb|EEQ57732.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 199
Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 32/107 (29%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT------------ 137
G K++ GD P G +Y+ N S+Y+LS+ + +PN D
Sbjct: 84 GDKVQQGDGITPSGKFYVCTK--NDQSQYYLSLGLSYPNIDDAERGLADGLINEEQYKAI 141
Query: 138 ----------------GADLMIHGEC--ASAGCYAMNNKQMQEIYAI 166
G +MIHGE +AGC A+ N M ++
Sbjct: 142 VDANKAGEQPPWDTPLGGAIMIHGEQGGGTAGCIAVTNDVMDILWEY 188
>gi|239909259|ref|YP_002956001.1| hypothetical protein DMR_46240 [Desulfovibrio magneticus RS-1]
gi|239799126|dbj|BAH78115.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 759
Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN-- 111
+ + K + R + E+ CA G K + GD + PEG Y+I
Sbjct: 40 VAVDKKSQAFFLLSRQSPVR---VAEFLPCATGQLLGDKFKEGDLRTPEGVYFIVRRKAS 96
Query: 112 -LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA------GCYAMNNKQM 160
LN L+ + FPN D +TG + IHG S GC A+N +
Sbjct: 97 GLNYELYGDLAFPLNFPNPADVVRKKTGHGIWIHGRGNSIVPYVTQGCVALNTPDL 152
>gi|253827436|ref|ZP_04870321.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510842|gb|EES89501.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 331
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC 147
G K + GD P G Y + +N + +Y+ L+ +PN +D+ RTG + IHG
Sbjct: 106 GNKQKEGDLATPIGVYTLEKRLVNLD-QYYGPLAFTTSYPNLYDRLQKRTGYGIWIHGMP 164
Query: 148 --------ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 165 LNGNREELNTRGCIAIENN 183
>gi|224373456|ref|YP_002607828.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588865|gb|ACM92601.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 319
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 49/261 (18%)
Query: 4 RYNILLFALFIFLNGC------HHSRSLIDKAEHPLSENL--IISMQKKRTSPF----HP 51
R+ IL F++ + S +L + E L + +Q K +
Sbjct: 2 RFLILFLVTFLYSANLIDIYRFNGSDALSEHIEKILGSKTYWLERLQNKDVTWGYYETQK 61
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
++ K++ IL+I+ N D+ + L+ K+ +G G K + GD + P G Y +
Sbjct: 62 DILVCVKSKKILKIF-ENNDSTFKLIDTVKVL--TGLDGDKKKEGDLKTPIGVYKLKGLI 118
Query: 112 LNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM-- 160
N +S Y + G+PN FDK +++ G + IHG + GC M+N ++
Sbjct: 119 ENVDSFYGPFAFVTGYPNLFDKINHKNGHGIWIHGVPLEGKRDDNNTKGCIVMDNNKLLQ 178
Query: 161 --QEI-----YAIVRDS--LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW------ 205
EI Y ++ ++ L + I AF ++ K +F+
Sbjct: 179 LKNEINYKDTYLLISENVPLTATKEEIASILAFIYKW-RKAWMNNDFESYKNFYDESFKK 237
Query: 206 ---NMLKLGHDY----FEKNH 219
LK DY FE
Sbjct: 238 SDGKDLKEFLDYKKRVFENKK 258
>gi|224418109|ref|ZP_03656115.1| hypothetical protein HcanM9_02416 [Helicobacter canadensis MIT
98-5491]
gi|313141644|ref|ZP_07803837.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130675|gb|EFR48292.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 331
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC 147
G K + GD P G Y + +N + +Y+ L+ +PN +D+ RTG + IHG
Sbjct: 106 GNKQKEGDLATPIGVYTLEKRLVNLD-QYYGPLAFTTSYPNLYDRLQKRTGYGIWIHGMP 164
Query: 148 --------ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 165 LNGNREELNTRGCIAIENN 183
>gi|298530698|ref|ZP_07018100.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510072|gb|EFI33976.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 421
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 17/136 (12%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK--ICAWSGTFGPKIETGDEQAPE 102
S + + K ++ KEYK + G G K GD + PE
Sbjct: 26 GDSRAPEDLFVVDKKNQTFFVFSNKSPLR----KEYKWEVTTGEG-VGDKEVEGDLKTPE 80
Query: 103 GFYY----IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGC 152
G Y+ I +L+ + + + + +PN D+A +TG + +HG + GC
Sbjct: 81 GIYFIERQIDTRHLDRDLYGEMGLTLNYPNPVDRAKGKTGFGIWLHGRGKEVVPFDTEGC 140
Query: 153 YAMNNKQMQEIYAIVR 168
AM+ K M + +V+
Sbjct: 141 VAMDMKYMHRLEDMVQ 156
>gi|218886565|ref|YP_002435886.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757519|gb|ACL08418.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 432
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN-N 111
++ + K + L I++R+ L Y +C G K GD + PEG Y++ +
Sbjct: 47 LVAVDKEDQKLHIYERHSP--LKLAASY-VCTTGQATGDKQTAGDLKTPEGIYFVVNKLS 103
Query: 112 LNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGE------CASAGCYAMNNKQMQ 161
+ + + ++ + +PN DK +TG+ + IH + + GC A+N +
Sbjct: 104 AGLDMEMYGGIAYTLNYPNPVDKLRRKTGSGIWIHSKGHDIVPRETKGCIALNRADID 161
>gi|303246802|ref|ZP_07333079.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
JJ]
gi|302491819|gb|EFL51699.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
JJ]
Length = 741
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 31/204 (15%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+ + K + R+ +L E CA G K + GD + PEG
Sbjct: 31 DMDSTPSRFVAVDKKAQSFALLSRHSP--LRVLTEIP-CATGQALGDKFKEGDLKTPEGV 87
Query: 105 YYIGWNN---LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE------CASAGCYAM 155
Y+I LN + L+ + FPN D +++G + IHG + GC A+
Sbjct: 88 YFITRRKSSGLNFDLYGDLAFPLDFPNPADVLRHKSGHGIWIHGRGHPITPYETQGCVAL 147
Query: 156 N-------NKQMQEIYAIV-RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP-NYSFWN 206
+ + ++ E +V D +R + + + ++ + W
Sbjct: 148 SMANIHRVDPELAEGMPVVIADQVRLGGKDSA-------ALREEAKEVVADTYAWAKAWQ 200
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQ 230
F H I +
Sbjct: 201 NKSPAFFDF---HDPEKFSITEGK 221
>gi|302385209|ref|YP_003821031.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum
WM1]
gi|302195837|gb|ADL03408.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum
WM1]
Length = 203
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 38/146 (26%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNL 112
+ I+ ++ + + VL+ EY + S + G K GD + P G +Y+
Sbjct: 52 VTIYVSKRTKTLSLKQNG---VLIAEYPVSLGASSSEGNKKVEGDMRTPSGEFYVCTR-- 106
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT----------------------------GADLMIH 144
N S +L++ + +P D G + IH
Sbjct: 107 NDKSVAYLALGLSYPAIKDAERGYADGIITQAQKDEIVKANLEGKQPPWDTPLGGAIEIH 166
Query: 145 G----ECASAGCYAMNNKQMQEIYAI 166
G E + GC A++N M ++
Sbjct: 167 GCRVPEGTTHGCVAVDNSAMDVLWNY 192
>gi|294338856|emb|CAZ87190.1| conserved hypothetical protein; putative exported protein
[Thiomonas sp. 3As]
Length = 434
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 14/139 (10%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
I+ +P I + + L ++++ + L Y G K
Sbjct: 173 PPTGAIAANLVALAPDVQRAIVVDTARSRLYLFEQR-NGVPQLEASYYFSQGKFGAG-KT 230
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSK-YFLS--INIGFPNEFDKAHNRTGADLMIHGEC--- 147
+ GD + P G Y+I + K + + + + +PNE+DK TG + +HG
Sbjct: 231 QIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLNYPNEWDKQQGHTGFGVWLHGTPPGS 290
Query: 148 ------ASAGCYAMNNKQM 160
AS GC ++N +
Sbjct: 291 YARVPLASDGCVVLSNPDV 309
>gi|296134919|ref|YP_003642161.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12]
gi|295795041|gb|ADG29831.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12]
Length = 447
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 14/139 (10%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
I+ +P I + + L ++++ + L Y G K
Sbjct: 186 PPTGAIAANLVALAPDVQRAIVVDTARSRLYLFEQR-NGVPQLEASYYFSQGKFGAG-KT 243
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSK-YFLS--INIGFPNEFDKAHNRTGADLMIHGEC--- 147
+ GD + P G Y+I + K + + + + +PNE+DK TG + +HG
Sbjct: 244 QIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLNYPNEWDKQQGHTGFGVWLHGTPPGS 303
Query: 148 ------ASAGCYAMNNKQM 160
AS GC ++N +
Sbjct: 304 YARVPLASDGCVVLSNPDV 322
>gi|291279367|ref|YP_003496202.1| hypothetical protein DEFDS_0974 [Deferribacter desulfuricans SSM1]
gi|290754069|dbj|BAI80446.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 413
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 25/166 (15%)
Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63
R I L + +F G S +I ++ K S TV + K++ L
Sbjct: 2 RKVIFLLIILVFYAGLSFSA-------------IIENIFSKGIS--DDTVFVVDKSQKKL 46
Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-GWNNLNPNSKYFL-- 120
+ + + ++ +Y G K GD++ PEG Y + + N S+ +
Sbjct: 47 FV-VQVKNDMPEIIWQYNNILLGEMEGDKQVEGDKKTPEGIYRVVSFIPKNQLSEIYGEG 105
Query: 121 SINIGFPNEFDKAHNRTGADLMIH------GECASAGCYAMNNKQM 160
+ + +PN DK +TG + IH G+ + GC A++N +
Sbjct: 106 AYPLNYPNPVDKIFGKTGYGIWIHGLKEDSGKKYTQGCVALHNGDL 151
>gi|291288878|ref|YP_003505694.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM
12809]
gi|290886038|gb|ADD69738.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM
12809]
Length = 418
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG----- 108
+ + KN L + K + +L +++ G K GDE+ PEG Y++
Sbjct: 37 VLVEKNGKWLHVLKV-AEGRVEVLDSFQVLTGRVD-GDKRVQGDEKTPEGVYFVTGFLSP 94
Query: 109 ---WNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHG------ECASAGCYAMNN 157
K + + + +PN D+ +TG + +HG + GC A +N
Sbjct: 95 EKLRAMYGEVGKQYGTGAYPLSYPNLKDRLQGKTGGGIWLHGIDPSRNVPVTKGCVAFDN 154
Query: 158 KQMQEIYAIVRDS 170
+++ ++ ++
Sbjct: 155 EKLTKMADYIKVG 167
>gi|303239380|ref|ZP_07325908.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
gi|302593166|gb|EFL62886.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
Length = 266
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 46/199 (23%)
Query: 20 HHSRSLIDKAEHPLSENLIIS--MQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVL 76
+++ E P+++ +S + +K + I + K++++L + L
Sbjct: 73 SDTKTAEAVQETPINQQRPLSDIINEKGIDIQTYGLEIYVDKSDHVLSLISNG-----KL 127
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN-LNPNSKYFLS--INIGFPNEFDKA 133
LK Y + G K +GD + PEG +YI + L+P +Y S + + +PN D
Sbjct: 128 LKSYHVELGDSDLGDKEISGDHKTPEGTFYISEKSILDPADEYLGSRWMRLSYPNIEDAE 187
Query: 134 HNRTGADLMIH-----------------------------------GECASAGCYAMNNK 158
+ G + GC ++N
Sbjct: 188 RGLEDGIISSSIYEEIVTAFKNFQTTPQNTSLGGGVGIHGGSTAELGSDWTWGCVGLSNS 247
Query: 159 QMQEIYAIVRDSLRGNMQS 177
+++ Y V+ + +Q
Sbjct: 248 SVEDFYDYVKVGTKVVIQK 266
>gi|114776723|ref|ZP_01451766.1| ErfK/YbiS/YcfS/YnhG [Mariprofundus ferrooxydans PV-1]
gi|114552809|gb|EAU55240.1| ErfK/YbiS/YcfS/YnhG [Mariprofundus ferrooxydans PV-1]
Length = 426
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 45 RTSPFHPTVIRIF---KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101
P V IF K + + +++ D + + + S G K GD + P
Sbjct: 147 DILQPGPDVASIFMFDKARSRMFVYQPGEDGRLKKITDEYVVTGS-VKGDKEHRGDGRTP 205
Query: 102 EGFY-YIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------AS 149
G Y +I + ++ I +PNE D+ H++ G+ + +HG +
Sbjct: 206 NGIYRFIKKLQGKQLQAIYGPIAFPIDYPNELDRLHHKDGSGIWLHGYPMDVSRRPPQDT 265
Query: 150 AGCYAMNNK---------QMQEIYAIVRDSLRGN 174
GC++++NK + + + +V ++LR
Sbjct: 266 RGCFSLSNKRLLAMAKHVSLGKTWVVVGENLRFG 299
>gi|323700390|ref|ZP_08112302.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. ND132]
gi|323460322|gb|EGB16187.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
ND132]
Length = 419
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN-- 110
+I + K L + ++ ++ + C + G K GD + P G Y++G
Sbjct: 36 IIAVDKEAQELIVLEQQSP--LHEVRRFP-CTTGQSMGDKAVEGDMRTPVGVYFVGHRIN 92
Query: 111 NLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEI 163
Y ++ ++ +PN D+ +TG+ + +HG + GC A+ M+++
Sbjct: 93 RTLDWDLYGNIAYSLNYPNPIDRIKGKTGSGIWLHGRGKTFLPRDTLGCVALKVPDMKDV 152
>gi|160938553|ref|ZP_02085907.1| hypothetical protein CLOBOL_03450 [Clostridium bolteae ATCC
BAA-613]
gi|158438540|gb|EDP16298.1| hypothetical protein CLOBOL_03450 [Clostridium bolteae ATCC
BAA-613]
Length = 192
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 55/195 (28%)
Query: 5 YNILLFALFI--FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
+L L L+ + A P + I + K +
Sbjct: 9 AGVLALCLAAAGPLSALAGQNAGPGAAYQPSVNGVNIYVSKMGNTL-------------T 55
Query: 63 LEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L+ + + + + + G K++ GDE P G +Y+ N S +L+
Sbjct: 56 LKQYAQTIG-------TWPVKLGRRSETGDKVQEGDEITPSGSFYVCTR--NDQSICYLA 106
Query: 122 INIGFPNEFDKAHN----------------------RT------GADLMIHGEC--ASAG 151
+ + +PN D + G + IHG+ ++G
Sbjct: 107 LGLSYPNAEDAERGLRDGLINEEQYNAIVEANKAGIQPPWNTPLGGAIEIHGDQGGGTSG 166
Query: 152 CYAMNNKQMQEIYAI 166
C A+ N M ++
Sbjct: 167 CIAVTNDVMDILWEY 181
>gi|302035740|ref|YP_003796062.1| hypothetical protein NIDE0357 [Candidatus Nitrospira defluvii]
gi|300603804|emb|CBK40136.1| exported protein of unknown function, contains TonB box [Candidatus
Nitrospira defluvii]
Length = 382
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 23/132 (17%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K + +L ++K + Y I S K GD PEG Y I +
Sbjct: 224 IVISKADRVLSLYKNG-----KKVLTYPIRLGSRGIRAKQHYGDGATPEGEYRIHRKRGS 278
Query: 114 PNSKYFLSINIGFPNEFDKAH----NRTG---------ADLMIHG-----ECASAGCYAM 155
+ YF ++ + +PN D+ ++G + +HG G +
Sbjct: 279 GQTPYFRALILDYPNADDRRRFEEAQQSGLIPKSQHMPGLIQLHGIAQGITDQPYGSILL 338
Query: 156 NNKQMQEIYAIV 167
+N Q+ ++ V
Sbjct: 339 DNPQIAALFDQV 350
>gi|317050283|ref|YP_004111399.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
gi|316945367|gb|ADU64843.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
Length = 474
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY-IGWN 110
I KN+ + I +R + + +L+ Y G K GDE+ P G Y+ +
Sbjct: 210 IFIWTSKNQQVTYIIQRQGEG-FTVLEAYHSSTGRIP-GEKQRRGDEKTPTGIYFPVSKM 267
Query: 111 NLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQ 159
N + + + + +PN DK RTG+ + +HG S GC +N+
Sbjct: 268 TTNQMPQRYGAYAFPVNYPNHLDKHLGRTGSGIWLHGINENDNGQIPYNSEGCVVFSNEG 327
Query: 160 M 160
+
Sbjct: 328 I 328
>gi|297171153|gb|ADI22163.1| uncharacterized protein conserved in bacteria [uncultured gamma
proteobacterium HF0200_24F15]
Length = 372
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYF-----LSINIGFPNEFDKAHNRTGADLMIHGE 146
K GD++ P G Y I P K ++ I +PN+ D+ + RTG+ + +HG
Sbjct: 169 KRREGDQKTPIGVYRIT--GFIPGRKLHERYGPGALPIDYPNDLDQIYERTGSGIWLHGT 226
Query: 147 ---------CASAGCYAMNNKQMQEIYAIVRDS 170
AS GC ++ N+ + ++ DS
Sbjct: 227 EPGSVNRAPRASDGCLSLANRDFLSLLRLIGDS 259
>gi|262199265|ref|YP_003270474.1| ErfK/YbiS/YcfS/YnhG family protein [Haliangium ochraceum DSM 14365]
gi|262082612|gb|ACY18581.1| ErfK/YbiS/YcfS/YnhG family protein [Haliangium ochraceum DSM 14365]
Length = 217
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 41/167 (24%)
Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW- 85
AE + +++ + K L +++ A +I
Sbjct: 40 RSAERDCPAQVGDLATSADPRLRAASLLVVEKGARRLGLYRGGRLAMCT-----RIALGV 94
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF-----------DKAH 134
G G K GD + P+G+Y ++ P SK+ +I + +PN D+A
Sbjct: 95 GGPEGDKEREGDRRTPQGWYR---SSDKPWSKFEGAIAVHYPNADDARAAQRAGRIDEAT 151
Query: 135 NR-----------------TGADLMIHGE----CASAGCYAMNNKQM 160
+ G +++IHG +AGC A+++ +
Sbjct: 152 AKRIVRALRRGQKPPQNTALGGEILIHGGGSRWDWTAGCIALSDTDL 198
>gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5]
gi|2982913|gb|AAC06531.1| putative protein [Aquifex aeolicus VF5]
Length = 397
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYY----IGWNNLNPNSKYF--LSINIGFPNEFDKA 133
Y + G K GD + PEG YY I L S+ + +++ + +PN +DK
Sbjct: 161 YPVTTGMN-IGDKEREGDGKTPEGVYYFTRFIPPEQL---SEIYGGIAVALNYPNPYDKL 216
Query: 134 HNRTGADLMIHGEC---------ASAGC-YAMNNKQMQEI 163
+TG+ + +HG ++ GC A + EI
Sbjct: 217 LGKTGSGIWLHGSNEKDRDKLPFSTRGCVVAQTDVLKTEI 256
>gi|296273934|ref|YP_003656565.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM
7299]
gi|296098108|gb|ADG94058.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM
7299]
Length = 320
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 87/233 (37%), Gaps = 39/233 (16%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
K+E S+ L + V+ K E++KR +L + I
Sbjct: 41 KSEKYWSKYLENIDVRYGYYESKKYVLVADKLSKKFELFKREDKKFLKILTQTMIS--GE 98
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHG 145
G K GD + P G Y + + +++ L++ +PN FDK+ N+ G + IHG
Sbjct: 99 KDGDKFLEGDLKTPIGAYKLTRKLTKLD-QFYGPLALVTNYPNTFDKSLNKEGHGIWIHG 157
Query: 146 EC-------ASAGCYAMNNKQM---------QEIYAIV--RDSLRGNMQSHIQIQAFPFR 187
+ GC A++N+ + E ++ +D + ++ AF F
Sbjct: 158 MPYEESRSDYTKGCIALDNESLVALDKSINYDESVLLISEKDIEPTTKKEMSEVLAFIFS 217
Query: 188 MTSKNMQLYQNNPNYSFW-NMLKLG----HDYFEKNHQEPFIQIINKQYVFFK 235
T ++ N S++ K D F+K+ + Y+F +
Sbjct: 218 WTD-AWRVSDTNTYLSYYSKDFKRANGQNFDAFKKHKE----------YIFSR 259
>gi|315453295|ref|YP_004073565.1| hypothetical protein HFELIS_08910 [Helicobacter felis ATCC 49179]
gi|315132347|emb|CBY82975.1| putative periplasmic protein [Helicobacter felis ATCC 49179]
Length = 335
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
I K + L ++ + + + G KI GD+ P G Y I L
Sbjct: 78 INKADPKLILYALQGEKIVKVNES--TALVGSKAGEKITEGDKATPIGVYQI-LKKLTGL 134
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162
Y+ ++ +PN FD A R G + IHG + GC A+ N +++
Sbjct: 135 DAYYGPFALETNYPNPFDVARKRNGHGIWIHGLPLDGKRDELNTKGCIAIQNPILKD 191
>gi|322378789|ref|ZP_08053218.1| conserved hypothetical secreted protein [Helicobacter suis HS1]
gi|322380638|ref|ZP_08054790.1| conserved hypothetical secreted protein [Helicobacter suis HS5]
gi|321146960|gb|EFX41708.1| conserved hypothetical secreted protein [Helicobacter suis HS5]
gi|321148819|gb|EFX43290.1| conserved hypothetical secreted protein [Helicobacter suis HS1]
Length = 309
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
I K + L ++K + + + + G K+ GD+ P G Y I N
Sbjct: 52 INKADPKLILYKMDGEKISKVNES--KALVGSKIGMKVSEGDKATPIGVYQIIKKITNL- 108
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYA 165
S Y+ L++ +PN D TG + IHG + GC A++NK +Q
Sbjct: 109 SAYYGPLALVTNYPNPLDVVLKHTGHGIWIHGMPLKGDRDNSYTKGCIAIDNKILQNYDK 168
Query: 166 IVRD 169
+VR+
Sbjct: 169 LVRN 172
>gi|317484503|ref|ZP_07943412.1| ykud domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924221|gb|EFV45398.1| ykud domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 308
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 27/204 (13%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
V+ + K+ + ++ +Y +C G K GD + PEG Y++
Sbjct: 67 LPDQAVVAVDKSRQRFFLMEKGKARDY-------LCTTGQAQGDKQVRGDLKTPEGVYFV 119
Query: 108 GWNNLNP-NSKYFL--SINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNK 158
+ + + + + +PN D+ +TG+ + +H S GC +N K
Sbjct: 120 VRKRTERLDFEEYGGEAYILDYPNPVDRLRGKTGSGIWVHSRGRAITPFESRGCVVLNLK 179
Query: 159 QMQEIYAIVRDSLRGNMQSHI--QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF- 215
+ E V L+ I +++ P R + + + W + G D F
Sbjct: 180 DIAE----VGPELKRGTPVLIGERVEIAP-RKDAVREVEERTRGWRAAWRRGEAG-DGFI 233
Query: 216 --EKNHQEPFIQIINKQYVFFKGQ 237
E+ ++ K+ G
Sbjct: 234 APERAASIRKVERQEKRVRVTFGP 257
>gi|85859285|ref|YP_461487.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85722376|gb|ABC77319.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 498
Score = 78.3 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ I K L ++ + ++ + E + G K+ +GD + PEG ++ +
Sbjct: 67 VIIDKKAQKLYVY-GTRNGQFRKVFETRCSTGKNQ-GDKLTSGDARTPEGIFFPTRKFTD 124
Query: 114 PN-SKYF--LSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQM 160
+ + L+ + +PN DK + G ++ IHG S GC ++N +
Sbjct: 125 DELTPIYGTLAFTLDYPNYLDKRTGKNGHNIWIHGTDKTLKSFQSNGCIVLDNSDI 180
>gi|147667742|gb|ABQ45837.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I L+ +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRIT-QKLDRLDQYYGVLAFVTNYPNLYDTLKKRTGYGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|317010762|gb|ADU84509.1| hypothetical protein HPSA_02490 [Helicobacter pylori SouthAfrica7]
Length = 330
Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ N D + K S G K GD P G Y I +
Sbjct: 73 ADKSKPNLEFYEIN-DNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L+ +PN +D RTG + +HG + GC A+ N+
Sbjct: 131 -QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENQ 182
>gi|147667734|gb|ABQ45833.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ N + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIN-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667746|gb|ABQ45839.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|332673691|gb|AEE70508.1| conserved hypothetical secreted protein [Helicobacter pylori 83]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667732|gb|ABQ45832.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667748|gb|ABQ45840.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667752|gb|ABQ45842.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|315586801|gb|ADU41182.1| conserved hypothetical secreted protein [Helicobacter pylori 35A]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667744|gb|ABQ45838.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667736|gb|ABQ45834.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ + + + K S G K GD P G Y I +
Sbjct: 73 ADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 131 -QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|261838238|gb|ACX98004.1| hypothetical protein KHP_0800 [Helicobacter pylori 51]
Length = 330
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ + + + K S G K GD P G Y I +
Sbjct: 73 ADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 131 -QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|147667738|gb|ABQ45835.1| conserved hypothetical secreted protein [Helicobacter pylori]
gi|317177644|dbj|BAJ55433.1| conserved hypothetical secreted protein [Helicobacter pylori F16]
Length = 330
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667740|gb|ABQ45836.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ + + + K S G K GD P G Y I +
Sbjct: 73 ADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 131 -QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601474|ref|YP_965874.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4]
gi|46450770|gb|AAS97416.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561703|gb|ABM27447.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4]
gi|311235007|gb|ADP87861.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris RCH1]
Length = 429
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 25/171 (14%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R +L LF+ S S + + ++ + KN
Sbjct: 6 IRRIPILALLFVLFAAATSSASDKG-----------WNTAIADSDLTPRRILAVDKNHQR 54
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL-- 120
I++R+ L + C G K+ GD + PEG Y+I Y L
Sbjct: 55 FLIFERHSP--LALRGTFP-CTTGQADGDKVAEGDLRTPEGIYFIE-GKRTSGLDYGLYG 110
Query: 121 --SINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEI 163
+ + +PN D+ +++G + IH + + GC A+N + +
Sbjct: 111 GIAYTLNYPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDIDAL 161
>gi|217034386|ref|ZP_03439801.1| hypothetical protein HP9810_889g31 [Helicobacter pylori 98-10]
gi|216943181|gb|EEC22651.1| hypothetical protein HP9810_889g31 [Helicobacter pylori 98-10]
Length = 321
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 42 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 99
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 100 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 158
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 159 RNELNTKGCIAIENP 173
>gi|317009506|gb|ADU80086.1| conserved hypothetical secreted protein [Helicobacter pylori
India7]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|308061845|gb|ADO03733.1| conserved hypothetical secreted protein [Helicobacter pylori Cuz20]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|317179115|dbj|BAJ56903.1| conserved hypothetical secreted protein [Helicobacter pylori F30]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667750|gb|ABQ45841.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667730|gb|ABQ45831.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|308184325|ref|YP_003928458.1| conserved hypothetical secreted protein [Helicobacter pylori
SJM180]
gi|308060245|gb|ADO02141.1| conserved hypothetical secreted protein [Helicobacter pylori
SJM180]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|208434440|ref|YP_002266106.1| conserved hypothetical secreted protein [Helicobacter pylori G27]
gi|208432369|gb|ACI27240.1| conserved hypothetical secreted protein [Helicobacter pylori G27]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|291276929|ref|YP_003516701.1| hypothetical protein HMU07090 [Helicobacter mustelae 12198]
gi|290964123|emb|CBG39967.1| putative periplasmic protein [Helicobacter mustelae 12198]
Length = 331
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG--WNNLNPN 115
K+ L ++K L + I G G K + GD+ P G Y L+P
Sbjct: 76 KDNASLILYKIENGHLTQLQQTNAIMGIGG--GAKQKKGDKVTPIGVYNFVELLEKLDP- 132
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163
Y+ ++ +PN +D NRTG+ + +HG + GC A+ N +QE
Sbjct: 133 --YYGPMAFATNYPNTYDNLLNRTGSGIWLHGLPLNGDRKDQNTKGCIAVENNLIQEF 188
>gi|297379710|gb|ADI34597.1| Hypothetical protein HPV225_0513 [Helicobacter pylori v225d]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ + + + K S G K GD P G Y I +
Sbjct: 73 ADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L++ +PN +D RTG + +HG + GC A+ N
Sbjct: 131 -QYYGVLALVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|109947439|ref|YP_664667.1| hypothetical protein Hac_0886 [Helicobacter acinonychis str.
Sheeba]
gi|109714660|emb|CAJ99668.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 330
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKI----CAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
K++ LE ++ N + +LK KI G K GD P G Y I
Sbjct: 73 ADKSKPNLEFYEINDN----MLK--KINGSKALVGSKKGDKTLEGDLATPIGVYRITQKL 126
Query: 112 LNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+ +Y+ L+ +PN +D RTG + +HG + GC A+ N+
Sbjct: 127 ERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENQ 182
>gi|298736229|ref|YP_003728755.1| hypothetical protein HPB8_734 [Helicobacter pylori B8]
gi|298355419|emb|CBI66291.1| conserved hypothetical secreted protein [Helicobacter pylori B8]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|317012334|gb|ADU82942.1| hypothetical protein HPLT_02565 [Helicobacter pylori Lithuania75]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|261839650|gb|ACX99415.1| hypothetical protein HPKB_0823 [Helicobacter pylori 52]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|217033182|ref|ZP_03438635.1| hypothetical protein HPB128_184g5 [Helicobacter pylori B128]
gi|216945091|gb|EEC23798.1| hypothetical protein HPB128_184g5 [Helicobacter pylori B128]
Length = 321
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + + K S G K GD P G Y I + +
Sbjct: 66 KSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 122
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 123 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 173
>gi|332703549|ref|ZP_08423637.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332553698|gb|EGJ50742.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 457
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL----SINIGFPNEFDKAHNRTG 138
CA G K GD + PEG Y+I L Y L + + FPN D+ +TG
Sbjct: 101 CATGQVAGDKYREGDLRTPEGVYFIQ-RKLTTGLDYQLYGDIAYTLNFPNPVDRIEGKTG 159
Query: 139 ADLMIHGE------CASAGCYAMNNKQM 160
+ IHG + GC A+N +
Sbjct: 160 YGIWIHGRGGKIVPMETRGCVALNTPDL 187
>gi|210134719|ref|YP_002301158.1| hypothetical protein HPP12_0524 [Helicobacter pylori P12]
gi|210132687|gb|ACJ07678.1| hypothetical protein HPP12_0524 [Helicobacter pylori P12]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|108562917|ref|YP_627233.1| hypothetical protein HPAG1_0492 [Helicobacter pylori HPAG1]
gi|107836690|gb|ABF84559.1| conserved hypothetical secreted protein [Helicobacter pylori HPAG1]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|317013935|gb|ADU81371.1| hypothetical protein HPGAM_02645 [Helicobacter pylori Gambia94/24]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|15611534|ref|NP_223185.1| hypothetical protein jhp0467 [Helicobacter pylori J99]
gi|4154995|gb|AAD06036.1| putative [Helicobacter pylori J99]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|307637196|gb|ADN79646.1| putative periplasmic protein [Helicobacter pylori 908]
gi|325995785|gb|ADZ51190.1| putative periplasmic protein [Helicobacter pylori 2018]
gi|325997381|gb|ADZ49589.1| putative periplasmic protein [Helicobacter pylori 2017]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|254779460|ref|YP_003057565.1| hypothetical protein HELPY_0829 [Helicobacter pylori B38]
gi|254001371|emb|CAX29356.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 330
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|147667726|gb|ABQ45829.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNNK 158
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIENP 182
>gi|188527645|ref|YP_001910332.1| conserved hypothetical secreted protein [Helicobacter pylori
Shi470]
gi|188143885|gb|ACD48302.1| conserved hypothetical secreted protein [Helicobacter pylori
Shi470]
gi|308063686|gb|ADO05573.1| conserved hypothetical secreted protein [Helicobacter pylori
Sat464]
Length = 330
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
K++ LE ++ + + K S G K GD P G Y I +
Sbjct: 73 ADKSKPSLEFYEIESN-MLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD 130
Query: 116 SKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
+Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 131 -QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|152990313|ref|YP_001356035.1| hypothetical protein NIS_0564 [Nitratiruptor sp. SB155-2]
gi|151422174|dbj|BAF69678.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 353
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI-CAWSGTFGPK 92
++ P +VI + KNE L++ + + ++ +I C G K
Sbjct: 70 PHTDDKQLENLLVHPNSFSVIVVSKNEQKLKL----IYGKNGFIQTIEIPCITGKRQGDK 125
Query: 93 IETGDEQAPEGFYYIGWNNLNPN---SKYF--LSINIGFPNEFDKA-HNRTGADLMIHGE 146
+E GD++ P G Y+ P SK + + + +PN DK +++TG + +H
Sbjct: 126 LEAGDKKTPNGVYF--PKWFIPQEKLSKIYGVGAFPLNYPNIIDKKIYHKTGDGIWLHAT 183
Query: 147 C-------ASAGCYAMNNKQMQEIYAIV 167
+S GC + N+ +I V
Sbjct: 184 NDDKRKPFSSNGCVVVTNENFTKIKPFV 211
>gi|158522215|ref|YP_001530085.1| hypothetical protein Dole_2204 [Desulfococcus oleovorans Hxd3]
gi|158511041|gb|ABW68008.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]
Length = 466
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 53 VIRIFKNENILEI---WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
VI + K L + +K ++ E K++K GPK+ GD++ PEG Y+
Sbjct: 61 VILVEKATQQLFLFSFYKNSIRKE----KQWKCSTGEN-HGPKLVMGDKKTPEGIYFFTR 115
Query: 110 NNLNPNSK--Y-FLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQM 160
+ Y L+ + +PN D + G+ + +HG S GC A+ N +
Sbjct: 116 KYTDSELAPIYGTLAFPLDYPNVLDHEAEKNGSAIWLHGTNKVLKDNDSNGCVALENGSI 175
Query: 161 Q------EIY 164
E+Y
Sbjct: 176 DALAPYIELY 185
>gi|315637664|ref|ZP_07892870.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478118|gb|EFU68845.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 323
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
VI K + ++ +N D + K+ I G K GD++ PEG + +
Sbjct: 69 VIVAEKENKKMTLFAKNGDDYKQISKDSMIV--GEKAGDKFLEGDKKTPEGAFELVQKRT 126
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEI 163
+ +++ ++ +PN FDK+ ++ G + IHG + GC A++N++++ +
Sbjct: 127 GLD-QFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPFNGDREKFTQGCLALDNEKLETL 185
>gi|317181838|dbj|BAJ59622.1| conserved hypothetical secreted protein [Helicobacter pylori F57]
Length = 330
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+E L + K++ LE ++ + + K S G K
Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKT 108
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC---- 147
GD P G Y I + +Y+ L+ +PN +D RTG + +HG
Sbjct: 109 LEGDLATPIGVYRITQKLERLD-QYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGD 167
Query: 148 ----ASAGCYAMNN 157
+ GC A+ N
Sbjct: 168 RNELNTKGCIAIEN 181
>gi|317180294|dbj|BAJ58080.1| conserved hypothetical secreted protein [Helicobacter pylori F32]
Length = 330
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|147667728|gb|ABQ45830.1| conserved hypothetical secreted protein [Helicobacter pylori]
Length = 330
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|15645145|ref|NP_207315.1| hypothetical protein HP0518 [Helicobacter pylori 26695]
gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695]
Length = 330
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|308182672|ref|YP_003926799.1| hypothetical protein HPPC_02545 [Helicobacter pylori PeCan4]
gi|308064857|gb|ADO06749.1| hypothetical protein HPPC_02545 [Helicobacter pylori PeCan4]
Length = 330
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
K++ LE ++ + + K S G K GD P G Y I + +
Sbjct: 75 KSKPSLEFYEIE-NNMLKKINSSKALVGS-KKGDKTLEGDLATPIGVYRITQKLERLD-Q 131
Query: 118 YF--LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
Y+ L+ +PN +D RTG + +HG + GC A+ N
Sbjct: 132 YYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 182
>gi|220903383|ref|YP_002478695.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867682|gb|ACL48017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 822
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 12/170 (7%)
Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62
R+ + LF+L + +L+ ++ + KN
Sbjct: 4 RRFAVFLFSLCALRALPGLAAALLCVLAASGYARADNWQASLYNEGLPSHLVAVDKNRQT 63
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP-NSKYF-- 119
+++ + Y C G K D + PEG Y++ + + + K +
Sbjct: 64 FMFFEKKSPLKLRY--TYP-CTTGQLTGDKKVLNDLRTPEGVYFVEYKIASGLDFKEYGG 120
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGE------CASAGCYAMNNKQMQEI 163
++ + +PN DK +TG + IH + ++ GC A+ K++ E+
Sbjct: 121 IAYTLNYPNPVDKLRGKTGHGIWIHSKGLGIEPLSTRGCVAIGLKEIDEV 170
>gi|256419960|ref|YP_003120613.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
gi|256034868|gb|ACU58412.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
Length = 190
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 35/150 (23%)
Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
+ + K++ + +++ + L K YK+ + K + GD PEG ++I
Sbjct: 41 PDKIFLLVDKSDYRMYLYE-----DVTLRKIYKVVFGNKDQSDKRQEGDRLTPEGTFHIL 95
Query: 109 WNNLNPNSKYFLSINIGFPNE--FDK-----------AHNRTGADLMIHGE--------- 146
+ + + + + +PNE +++ A G + IHG
Sbjct: 96 SKRM--DKLWNRFMLLDYPNEASWNRFHELQSAGVLPAGATPGGGIGIHGVEWNSGIRDN 153
Query: 147 ------CASAGCYAMNNKQMQEIYAIVRDS 170
+ GC +M N + E+Y I++
Sbjct: 154 YVEGRINWTLGCVSMKNSDVSELYDIIKVG 183
>gi|86159927|ref|YP_466712.1| hypothetical protein Adeh_3509 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776438|gb|ABC83275.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 171
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 42/182 (23%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
T ++LL FL C H P P +I + E+
Sbjct: 8 TAVASLLLVPPLAFLLACAH---------RPAPPGC----------PPVDALILVDTAEH 48
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L + + A + + S K GD + P G Y +G P++ +
Sbjct: 49 RLALCEAGAAAAV-----FPVALGSAGT-EKRAEGDRRTPLGAYALGTPR--PSAGFGTF 100
Query: 122 INIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAM-NNKQMQEIYAI 166
I IG+P + RTG+++ IHG +AGC A+ ++ ++ + A
Sbjct: 101 IPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCVALGSDPEVAAVAAF 160
Query: 167 VR 168
V
Sbjct: 161 VE 162
>gi|157737873|ref|YP_001490557.1| hypothetical protein Abu_1640 [Arcobacter butzleri RM4018]
gi|157699727|gb|ABV67887.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 323
Score = 74.9 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
VI K + ++ +N D + K+ I G K GD++ PEG + +
Sbjct: 69 VIIAEKENKKMTLFAKNGDDYKQISKDSMIV--GEKAGDKFLEGDKKTPEGAFELVQKRT 126
Query: 113 NPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEI 163
+ +++ ++ +PN FDK+ ++ G + IHG + GC A++N++++ +
Sbjct: 127 GLD-QFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPFNGDREKFTQGCLALDNEKLETL 185
>gi|165924287|ref|ZP_02220119.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|165916267|gb|EDR34871.1| putative lipoprotein [Coxiella burnetii RSA 334]
Length = 107
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 114 PNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIV 167
P S++ LS+ + +PN D+ + R G D+ IHG AS GC + NK +++++ +
Sbjct: 1 PASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA 60
Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP-NYS-FWNMLKLG 211
+ HI++ P + +P + ++
Sbjct: 61 ----YLVGERHIKVIIAPDDLRYHAPIYGAVHPRWLPQLYAQIRQA 102
>gi|303326005|ref|ZP_07356448.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3]
gi|302863921|gb|EFL86852.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3]
Length = 385
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ + KN +++ + + C G K E D + PEG Y++ +
Sbjct: 40 LVAVDKNRRAFLFFEKKSPLKLKY--SFP-CVTGQLAGDKQELNDLRTPEGIYFVEYKIA 96
Query: 113 NP-NSKYF--LSINIGFPNEFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQ 161
+ + K + ++ + +PN D+ +TG + IH G + GC A+ K++
Sbjct: 97 SGLDFKEYGGIAYTLNYPNPVDRLRGKTGHGIWIHSKGFGLVPTRGCVAIGLKEID 152
>gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath]
gi|53758832|gb|AAU93123.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 177
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 41/129 (31%)
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF---------- 130
KI G D + P G Y IGW +N NSK+ + +PN
Sbjct: 45 KIAIGQHGAGVDKRRNDNKTPLGEYRIGW--INENSKFHRFFGLTYPNPEIAKRGFIRGL 102
Query: 131 -DKAHNR-----------------TGADLMIHGE-----------CASAGCYAMNNKQMQ 161
D+ R G + IHG + GC A+ N+Q+
Sbjct: 103 IDEQLVRHILRAHLVEATPPQDTPLGGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQID 162
Query: 162 EIYAIVRDS 170
++ VR
Sbjct: 163 QLTPWVRKG 171
>gi|307544800|ref|YP_003897279.1| hypothetical protein HELO_2210 [Halomonas elongata DSM 2581]
gi|307216824|emb|CBV42094.1| hypothetical protein HELO_2210 [Halomonas elongata DSM 2581]
Length = 214
Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 48/212 (22%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNE 60
R+ L L + L S + + +A E++ + + I I
Sbjct: 6 RRRFGSLFAGLCLALLMPSLSHAGLMEAIQTRDESMDELLTHAGQPRYSNEVWILIDNEA 65
Query: 61 NILEIWKRNVDAEYVLLKEY-KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119
L +++ N LLK + I G P+ + G P G + + N +SK+
Sbjct: 66 ASLSLYRGNT-----LLKYFSPISLGRGGAEPQRQRGGRVTPLGEFRVT--RFNFDSKFH 118
Query: 120 LSINIGFPNE----------------FD------KAHNRT------GADLMIHGEC---- 147
+ + +P +D + H G + IHG
Sbjct: 119 TFVGLNYPTPTHARMALQSGIYSQRDYDDYFAYYRRHGNPPQDTVLGGYIGIHGVGVADP 178
Query: 148 -------ASAGCYAMNNKQMQEIYAIVRDSLR 172
+ GC A+ + Q+ + +++ R
Sbjct: 179 EIHRRFHWTDGCVAVTDGQIDTLSSMIDIGTR 210
>gi|220918755|ref|YP_002494059.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956609|gb|ACL66993.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 171
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 42/182 (23%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
T ++LL FL C H + P + +I + E+
Sbjct: 8 TAVVSLLLVPPLAFLLACAH------RPARPGCPPVDA-------------LILVDTAEH 48
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L + + A + + S K GD + P G Y +G P++ +
Sbjct: 49 RLALCEAGAAAAV-----FPVALGSAGT-EKRAEGDRRTPLGAYALGTPR--PSAGFGTF 100
Query: 122 INIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAM-NNKQMQEIYAI 166
I IG+P + RTG+++ IHG +AGC A+ +++++ + A
Sbjct: 101 IPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCVALGSDREVAAVAAF 160
Query: 167 VR 168
V
Sbjct: 161 VE 162
>gi|225850906|ref|YP_002731140.1| hypothetical protein PERMA_1371 [Persephonella marina EX-H1]
gi|225645444|gb|ACO03630.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 361
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 11/155 (7%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
++ K +SE ++ P I + K+ L++ K D +L+ I
Sbjct: 68 KAEAQKLFSKISEKNKGVLENVIYIPEGSYAIVVSKSRQRLKVIKFVNDLPVEVLELRSI 127
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL-SINIGFPNEFDKA-HNRTGAD 140
G K++ GD++ P G Y+ Y + + + +PN D+ N+TG
Sbjct: 128 T-GKRP-GDKLKEGDQRTPNGVYFPVKYLTKLAPMYGVGAFPLNYPNILDRKFLNKTGNG 185
Query: 141 LMIHGEC-------ASAGCYAMNNKQMQEIYAIVR 168
+ IH +S GC +NN+ ++ ++
Sbjct: 186 IWIHASDKPDRPYFSSNGCVVLNNEDFNKLKRFIK 220
>gi|197123398|ref|YP_002135349.1| hypothetical protein AnaeK_2998 [Anaeromyxobacter sp. K]
gi|196173247|gb|ACG74220.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
Length = 175
Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
E+W ++ + G K GD + P G Y + + P+++Y
Sbjct: 51 RRELWLCRGGTPAA---QFAVALGRSGVG-KRRHGDGRTPLGTYPL--GDPRPSTQYGTF 104
Query: 122 INIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAM-NNKQMQEIYAI 166
I I +P A TGA + IHG + GC A ++ + I A
Sbjct: 105 IPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCIATGTDEDVDAIAAF 164
Query: 167 VRD 169
VR
Sbjct: 165 VRA 167
>gi|220918201|ref|YP_002493505.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956055|gb|ACL66439.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 175
Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 19/121 (15%)
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
E+W ++ + G K GD + P G Y + + P+++Y
Sbjct: 53 RRELWLCRGGIPAA---QFAVALGRSGVG-KRRHGDGRTPLGTYPL--GDPRPSTQYGTF 106
Query: 122 INIGFPNEFDKAHNRTGADLMIHGEC------------ASAGCYAM-NNKQMQEIYAIVR 168
I I +P A TGA + IHG + GC A ++ + I A VR
Sbjct: 107 IPIAYPTPAQAARGFTGAAVGIHGPPRGTEGYPVTEVDWTQGCIATGTDEDVDAIAAFVR 166
Query: 169 D 169
Sbjct: 167 A 167
>gi|86159334|ref|YP_466119.1| hypothetical protein Adeh_2912 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775845|gb|ABC82682.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 175
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
E+W + A ++ + G K GD + P G Y + + P+ +Y
Sbjct: 51 RRELWLCSGGAPAA---QFTVALGRSGVG-KRRRGDGRTPLGTYPL--GDPRPSPQYGTF 104
Query: 122 INIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAM-NNKQMQEIYAI 166
I I +P A TGA + IHG + GC A + + I A
Sbjct: 105 IPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCIATGTDGDVDAIAAF 164
Query: 167 VRD 169
VR
Sbjct: 165 VRA 167
>gi|294506432|ref|YP_003570490.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
gi|294342760|emb|CBH23538.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
Length = 304
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 49/160 (30%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG-----DE-QAPEG-F 104
IR+ K + + +++ L ++ F K G D + PEG F
Sbjct: 147 VWIRVSKRKRRVYVYRGA-----ELAHAFEADMAYNAFADKKRNGGKTRPDHWRTPEGTF 201
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHN----------------------------R 136
Y + + NP S+++ ++ + +P D
Sbjct: 202 YVV---HKNPQSEFYKALVLNYPKVEDARRGLDAGLISRAQYEAIRQAQQEHRMPPMSTD 258
Query: 137 TGADLMIHG------ECASAGCYAMNNKQMQEIYAIVRDS 170
G + IHG + GC A+ N M I+ VR
Sbjct: 259 LGGWIEIHGDGTGDATAWTQGCVAIRNGAMDVIWEQVRVG 298
>gi|83816729|ref|YP_444677.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
gi|83758123|gb|ABC46236.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
Length = 304
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 49/160 (30%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG-----DE-QAPEG-F 104
IR+ K + + +++ L ++ F K G D + PEG F
Sbjct: 147 VWIRVSKRKRRVYVYRGA-----ELAHAFEADMAYNAFADKKRNGGKTRPDHWRTPEGTF 201
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHN----------------------------R 136
Y + + NP S+++ ++ + +P D
Sbjct: 202 YVV---HKNPQSEFYKALVLNYPKVEDARRGLDAGLISRAQYEAIRQAQQEHRMPPMGTD 258
Query: 137 TGADLMIHG------ECASAGCYAMNNKQMQEIYAIVRDS 170
G + IHG + GC A+ N M I+ VR
Sbjct: 259 LGGWIEIHGDGTGDATAWTQGCVAIRNGAMDVIWEQVRVG 298
>gi|290476305|ref|YP_003469209.1| hypothetical protein XBJ1_3327 [Xenorhabdus bovienii SS-2004]
gi|289175642|emb|CBJ82445.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 67
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233
MT +NMQ Y+NN NYSFW L+ ++YF KN + + +I+ QY+
Sbjct: 1 MTQQNMQRYRNNDNYSFWIQLQPAYEYFAKNSKPTTVNVIDGQYIV 46
>gi|255022097|ref|ZP_05294101.1| hypothetical protein ACA_2578 [Acidithiobacillus caldus ATCC 51756]
gi|254968455|gb|EET26013.1| hypothetical protein ACA_2578 [Acidithiobacillus caldus ATCC 51756]
Length = 276
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 63/256 (24%)
Query: 2 TNRYNILLFALF-IFLNGCHHSRSL---------IDKAEHPLSENLIISMQKKRTSPFHP 51
T + L F + L GC P+ + Q + +P
Sbjct: 5 TLWWRALWLCAFPMLLVGCTTQAPAPQVHSVAWYAAHIPPPVIPTVSAPTQSVQPAPAPQ 64
Query: 52 TV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
+ I + ++ L ++K + LL+ + + P+ GD+ P G Y IG+
Sbjct: 65 ELHIVVDTSDRQLRVYKGD-----ALLETFPVAIGFNGAAPRRTRGDDITPVGKYRIGYV 119
Query: 111 NLNPNSKYFLSINIGFPN-----------------------EFDKAHNRT-----GADLM 142
++Y + + +PN D+ G +
Sbjct: 120 RFG--TRYGPFMLLTYPNRDDARWGLREGIITQRQYDAIISALDRGEAPPQNTPLGGYIG 177
Query: 143 IHG---------------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ--AFP 185
IHG +AGC A++N +++ +VR ++ + P
Sbjct: 178 IHGMGPQFADDPDSKVFPGRWTAGCVALSNWDARQLATLVRVGTPVDIVGEVPGYRRGTP 237
Query: 186 FRMTSKNMQLYQNNPN 201
+ +Q +NP
Sbjct: 238 AQRRPAGLQSVADNPE 253
>gi|197123988|ref|YP_002135939.1| hypothetical protein AnaeK_3597 [Anaeromyxobacter sp. K]
gi|196173837|gb|ACG74810.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
Length = 171
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 18/104 (17%)
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
+ + S G K GD + P G Y +G P++ + I I +P + TG+
Sbjct: 62 FPVALGSAGTG-KRVEGDRRTPLGAYALGAPR--PSAGFGTFIPIAYPTAEQRRAGFTGS 118
Query: 140 DLMIHG--------------ECASAGCYAM-NNKQMQEIYAIVR 168
++ IHG +AGC A+ ++ ++ + A
Sbjct: 119 NVGIHGPSRATRWAGRLNTWTDWTAGCVALGSDPDVRAVAAFAE 162
>gi|77165191|ref|YP_343716.1| ErfK/YbiS/YcfS/YnhG [Nitrosococcus oceani ATCC 19707]
gi|254434430|ref|ZP_05047938.1| hypothetical protein NOC27_1361 [Nitrosococcus oceani AFC27]
gi|76883505|gb|ABA58186.1| ErfK/YbiS/YcfS/YnhG [Nitrosococcus oceani ATCC 19707]
gi|207090763|gb|EDZ68034.1| hypothetical protein NOC27_1361 [Nitrosococcus oceani AFC27]
Length = 213
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 50/156 (32%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
I K++ +L + K ++K+Y G G K GD+ PEG Y I P+
Sbjct: 35 IIKSKRLLIVKK-----GGQIIKKYHAALGQGGGGGKRIEGDKHTPEGEYEIV--GFWPS 87
Query: 116 SKYFLSINIGFPNEFDKAHNRTGADL---------------------------------- 141
K+ I++ +P+ D +
Sbjct: 88 HKFHYFIHLDYPSRGDALAGYKEGLISWDELVHIYRAQQEKNGIPPQQTRLGGFIGIHGI 147
Query: 142 --------MIHGE-CASAGCYAMNNKQMQEIYAIVR 168
MIH + GC A+ N+++ E+ ++
Sbjct: 148 GEETRKKLMIHRNFNWTRGCVALTNREIDELRQFIQ 183
>gi|270159738|ref|ZP_06188394.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289165491|ref|YP_003455629.1| hypothetical protein LLO_2163 [Legionella longbeachae NSW150]
gi|269988077|gb|EEZ94332.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288858664|emb|CBJ12559.1| putative conserved hypothetical proteins [Legionella longbeachae
NSW150]
Length = 162
Score = 69.9 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNL 112
I + + IL I K ++K +K+ + G K + GD + P G Y +
Sbjct: 31 INVHTTKRILNICKNGT-----VIKTFKVALGNKGIG-KKKAGDNKTPIGLYGLAHPRKS 84
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-N 157
N + I I +P +A TG D+ IHG ++ GC A+ N
Sbjct: 85 NQFKVF---IPILYPTTKQRAAGYTGRDVGIHGPTQSSNSFGWLNNLPYSTRGCIAVGKN 141
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQI 181
+ V + ++ N + + I
Sbjct: 142 NYID----YVANWVKANPGAKVLI 161
>gi|224437280|ref|ZP_03658252.1| hypothetical protein HcinC1_04867 [Helicobacter cinaedi CCUG 18818]
Length = 335
Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC------- 147
D P G Y + + +Y+ L+ + +PN +D++ +TG + IHG
Sbjct: 116 DLTTPIGSYDLNARLTGLD-QYYGPLAFSTSYPNVYDQSLKKTGGGIWIHGLPLNGNREE 174
Query: 148 -ASAGCYAMNNK 158
+ GC A++N+
Sbjct: 175 LNTRGCIAIDNE 186
>gi|313143735|ref|ZP_07805928.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128766|gb|EFR46383.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 321
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC------- 147
D P G Y + + +Y+ L+ + +PN +D++ +TG + IHG
Sbjct: 102 DLTTPIGSYDLNARLTGLD-QYYGPLAFSTSYPNVYDQSLKKTGGGIWIHGLPLNGNREE 160
Query: 148 -ASAGCYAMNNK 158
+ GC A++N+
Sbjct: 161 LNTRGCIAIDNE 172
>gi|163782557|ref|ZP_02177554.1| hypothetical protein HG1285_16775 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882130|gb|EDP75637.1| hypothetical protein HG1285_16775 [Hydrogenivirga sp. 128-5-R1-1]
Length = 395
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 26/161 (16%)
Query: 24 SLIDKAEHPLS-ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE--- 79
+LI K ++P S + + R S P ++ N + ++ ++Y+L+
Sbjct: 97 ALIRKVDNPESFRKKMTDIIWSRFSIPPPVIVE---NPDDKYVFLVEKMSQYLLIYRGKV 153
Query: 80 ----YKICAWSGTFGPKIETGDEQAPEGFYY----IGWNNLNPNSKYFLSINIGFPNEFD 131
Y + K GD++ PEG YY I L P +++ + +PN D
Sbjct: 154 LENLYPVTTGQDWE-DKWVEGDKRTPEGIYYFTEFIPPRRL-PKMYGGIAVVLNYPNPVD 211
Query: 132 KAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEI 163
+ + G+ + +HG ++ GC +N ++ I
Sbjct: 212 RLLGKGGSGIWLHGSDEENRNNIPFSTRGCVVADNNDLRSI 252
>gi|32265806|ref|NP_859838.1| hypothetical protein HH0307 [Helicobacter hepaticus ATCC 51449]
gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 313
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC------- 147
D P G Y + + +Y+ L+ + +PN +D++ +TG + IHG
Sbjct: 94 DLTTPIGSYDLNARLTGLD-QYYGPLAFSTNYPNVYDQSLKKTGGGIWIHGLPLNGNRED 152
Query: 148 -ASAGCYAMNNK 158
+ GC A++N+
Sbjct: 153 INTRGCIAIDNE 164
>gi|198282860|ref|YP_002219181.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667021|ref|YP_002425061.1| ErfK/YbiS/YcfS/YnhG family [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247381|gb|ACH82974.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519234|gb|ACK79820.1| ErfK/YbiS/YcfS/YnhG family [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 281
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 45/142 (31%)
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF- 130
+L Y + PK GD+ P G Y IGW + ++Y + + +PN
Sbjct: 81 KGGTVLATYPVAIGFHGAAPKRMRGDDVTPVGRYRIGWVSRG--TRYGPFMGLTYPNREN 138
Query: 131 ----------DKAHNRT-----------------GADLMIHG---------------ECA 148
++A R G ++ IHG
Sbjct: 139 AEWGLREGIINRAQYRAIVDAIDAGQTPPQNTPLGGEIGIHGMGPQFSDDPQSKVFPGRW 198
Query: 149 SAGCYAMNNKQMQEIYAIVRDS 170
+AGC A++N Q+I A+VR
Sbjct: 199 TAGCVALSNWDAQQIAALVRVG 220
>gi|254496265|ref|ZP_05109158.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354522|gb|EET13164.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 162
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 24/126 (19%)
Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNLNPNSKYFLSINIGFPNEF 130
++K +K+ + G K GD + P G Y + N + I I +P
Sbjct: 44 KHGTVIKTFKVALGNKGVG-KKRAGDNKTPIGLYGLAHPRKSNQFKVF---IPILYPTTK 99
Query: 131 DKAHNRTGADLMIHG--------------ECASAGCYAMN-NKQMQEIYAIVRDSLRGNM 175
A TG D+ IHG ++ GC A+ N ++ V + ++ N
Sbjct: 100 QLAAGYTGRDVGIHGPTQSSNWFSWLNNLPNSTRGCIAVGKNNHIE----YVANWIKANP 155
Query: 176 QSHIQI 181
+ + I
Sbjct: 156 GAKVLI 161
>gi|307610960|emb|CBX00579.1| hypothetical protein LPW_22971 [Legionella pneumophila 130b]
Length = 154
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNL 112
I + + IL I K ++K +K+ G K + GD + P G Y +
Sbjct: 23 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 76
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-N 157
N + I I +P + A TG D+ IHG ++ GC A+ N
Sbjct: 77 NQFKVF---IPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKN 133
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQI 181
++ V + ++ N + + I
Sbjct: 134 NYIE----YVANWVKANPGAKVLI 153
>gi|54298010|ref|YP_124379.1| hypothetical protein lpp2067 [Legionella pneumophila str. Paris]
gi|148359657|ref|YP_001250864.1| hypothetical protein LPC_1575 [Legionella pneumophila str. Corby]
gi|296107703|ref|YP_003619404.1| putative protein conserved in bacteria [Legionella pneumophila
2300/99 Alcoy]
gi|53751795|emb|CAH13219.1| hypothetical protein lpp2067 [Legionella pneumophila str. Paris]
gi|148281430|gb|ABQ55518.1| conserved hypothetical protein [Legionella pneumophila str. Corby]
gi|295649605|gb|ADG25452.1| putative protein conserved in bacteria [Legionella pneumophila
2300/99 Alcoy]
Length = 162
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNL 112
I + + IL I K ++K +K+ G K + GD + P G Y +
Sbjct: 31 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-N 157
N + I I +P + A TG D+ IHG ++ GC A+ N
Sbjct: 85 NQFKVF---IPILYPTKKQLAAGYTGRDVGIHGPTQSPGVFSWLNNLPGSTRGCVAVGKN 141
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQI 181
++ V + ++ N + + I
Sbjct: 142 NYIE----YVANWVKANPGAKVLI 161
>gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens]
gi|53754810|emb|CAH16297.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens]
Length = 162
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNL 112
I + + IL I K ++K +K+ G K + GD + P G Y +
Sbjct: 31 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-N 157
N + I I +P + A TG D+ IHG ++ GC A+ N
Sbjct: 85 NQFKVF---IPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKN 141
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQI 181
++ V + ++ N + + I
Sbjct: 142 NYIE----YVANWVKANPGAKVLI 161
>gi|194332934|ref|YP_002014794.1| hypothetical protein Paes_0087 [Prosthecochloris aestuarii DSM 271]
gi|194310752|gb|ACF45147.1| hypothetical protein Paes_0087 [Prosthecochloris aestuarii DSM 271]
Length = 93
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 27/80 (33%)
Query: 125 GFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYA 165
+P+ D+ R G D+ IHG + GC A+ N +M E++
Sbjct: 22 DYPDPTDRMRARKAGLHPGGDICIHGWPDSVGQRGAVPLTGDWTLGCIAVTNDEMDELWH 81
Query: 166 IVRDSLRGNMQSHIQIQAFP 185
V + +P
Sbjct: 82 AVPVGT--------PVIIYP 93
>gi|254489736|ref|ZP_05102931.1| hypothetical protein MDMS009_67 [Methylophaga thiooxidans DMS010]
gi|224464821|gb|EEF81075.1| hypothetical protein MDMS009_67 [Methylophaga thiooxydans DMS010]
Length = 187
Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 49/159 (30%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ I ++E L I + +L+ + + SG K+++GD P G Y+I +
Sbjct: 29 LVIKRSEKRLLI-----QKDGEVLRSFHVALGSGGRKAKMKSGDRLTPLGKYHIT--QVR 81
Query: 114 PNSKYFLSINIGFPNEFD-----------KAHNR-------------------------- 136
+ ++ + I + +P+ D KA R
Sbjct: 82 DSDRFHMFIQLDYPSVRDAITALKEDRISKAQYRKILDAHIFGNLPPQNTPLGGAIGIHG 141
Query: 137 ----TGADLMIHG-ECASAGCYAMNNKQMQEIYAIVRDS 170
T + IH + GC A+ N +++++ +
Sbjct: 142 IGVETKDKIEIHEIADWTKGCIALRNDEIEQLTKYISKG 180
>gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629452|gb|AAU28193.1| hypothetical protein lpg2127 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 162
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-WNNL 112
I + + IL I K ++K +K+ G K + GD + P G Y +
Sbjct: 31 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGLAHPRKS 84
Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-N 157
N + I I +P + A +G D+ IHG ++ GC A+ N
Sbjct: 85 NQFKVF---IPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKN 141
Query: 158 KQMQEIYAIVRDSLRGNMQSHIQI 181
++ V + ++ N + + I
Sbjct: 142 NYIE----YVANWVKANPGAKVLI 161
>gi|307824797|ref|ZP_07655020.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
SV96]
gi|307734155|gb|EFO05009.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
SV96]
Length = 180
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 41/122 (33%)
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT--- 137
I G G K GD P G Y IGW + +S + + +P+ D
Sbjct: 48 DIAIGRGGAGFKSHQGDNVTPFGSYRIGW--VGESSSFRKFFGLTYPSAEDAQKALEEGV 105
Query: 138 -------------------------GADLMIHG-----------ECASAGCYAMNNKQMQ 161
G + IHG + GC A+ N Q+
Sbjct: 106 INQVAYNSIITAHRFHQVPPQNTPLGGRIGIHGLGRADEKIHKSMNWTHGCIALTNGQID 165
Query: 162 EI 163
+
Sbjct: 166 HL 167
>gi|92113689|ref|YP_573617.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
gi|91796779|gb|ABE58918.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
Length = 212
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 45/167 (26%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
+ + I E L+I++ + + + + G + G P G
Sbjct: 25 AMAADDEIWVLIDDREATLDIYR----GDTRIERFEPVSLGRGGTARVRKQGSNMTPTGE 80
Query: 105 YYIGWNNLNPNSKYFLSINIGFP-----------------------NEFDKAHNRT---- 137
++I N +N SK+ + + + +P + + +
Sbjct: 81 FHI--NRINRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRNGAPPQDTV 138
Query: 138 -GADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDSLR 172
G + IHG + GC A+ N Q++E+ +V R
Sbjct: 139 LGGYIGIHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLVSIGTR 185
>gi|261884737|ref|ZP_06008776.1| putative periplasmic protein [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 200
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 114 PNSKYF--LSINIGFPNEFDKAHNRTGADLMIHGEC----------ASAGCYAMNNKQMQ 161
P Y+ +S N+ +PN FDK +RTG + IHG + GC M N +
Sbjct: 1 PEDTYYGPVSFNLSYPNLFDKLRDRTGGGIWIHGFPLSGNIREDVYKTKGCVVMPNDLLL 60
Query: 162 EIYAIVRD 169
+ +I++D
Sbjct: 61 NLESILKD 68
>gi|295111271|emb|CBL28021.1| Uncharacterized protein conserved in bacteria [Synergistetes
bacterium SGP1]
Length = 263
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 35/180 (19%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV------IRIFKNEN 61
L A +++ + E P E ++ S P I I K +
Sbjct: 81 ALLADEALDAASSEPGAVLPEVEEPEDETPQMTEPTPTPSALRPPRDAGKYWILINKGQY 140
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121
L +++ L+K Y + G K GD + PEG + + ++ S +
Sbjct: 141 RLSLYRGR-----DLVKTYNVAIGKNP-GNKRRVGDNRTPEGQFRVL--SIENASGWKHD 192
Query: 122 INIGFPNEFDKAHNR--------TGA--DLMIH--------GECASAGCYAMNNKQMQEI 163
G + + A TG + IH G AS GC MNN +++++
Sbjct: 193 FGDG---KGEIAGAYGPWFIRLDTGGWKGIGIHGTHAPDSLGTMASEGCIRMNNDEIRDL 249
>gi|310641373|ref|YP_003946131.1| erfk/ybis/ycfs/ynhg family protein [Paenibacillus polymyxa SC2]
gi|309246323|gb|ADO55890.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa SC2]
Length = 476
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 52/180 (28%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P I + K+++ L + N+ L++ Y I E+ PEG + I
Sbjct: 329 LEQPLRIVVDKSKHRLALVSGNI-----LIRNYPIGLGG-----------ERTPEGKFVI 372
Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA--------DLMIHGECA--------SAG 151
+NPN K++ G+ + IHG S G
Sbjct: 373 TDKVVNPNG---------------KSNGEFGSRGMQLSATNYAIHGTNEPESIGKNESLG 417
Query: 152 CYAMNNKQMQEIYAIVRDS---LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF-WNM 207
C M + ++E++A+V + GN Q+ R TS+ Q Q NP+ ++ W
Sbjct: 418 CVRMGKEDVEELFALVPSGTEVVIGNGGLPDQVLVPSSRFTSE-PQHDQTNPHKTYHWLN 476
>gi|300114070|ref|YP_003760645.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
gi|299540007|gb|ADJ28324.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
Length = 213
Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 50/161 (31%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P + I K++ +L + K ++K Y G G K GD+ PEG Y +
Sbjct: 30 PYELIIIKSKRLLIVKKGR-----QIIKRYHAAFGRGGVGGKRVEGDKHTPEGNYEVV-- 82
Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADL----------------------------- 141
P+ K+ I++ +P+ D +
Sbjct: 83 GFWPSHKFHYFIHLDYPSRGDALVGYKKGLISRQELLHIYRAQQEKNGIPPQQTRLGGFI 142
Query: 142 -------------MIHGE-CASAGCYAMNNKQMQEIYAIVR 168
MIH + GC A+ N ++ E+ ++
Sbjct: 143 GIHGIGVETRKKLMIHRNFDWTRGCVALTNTEIDELRQFIQ 183
>gi|308068492|ref|YP_003870097.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
gi|305857771|gb|ADM69559.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
Length = 474
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 52/194 (26%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
S L+ S R P I + K+++ L + N VL++ Y I
Sbjct: 313 SSPLLASSLHGRPFLGQPLRIVVDKSKHRLALVSGN-----VLIRNYPIGLGG------- 360
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA--------DLMIHG 145
E+ PEG + I +NPN K++ G+ + IHG
Sbjct: 361 ----ERTPEGKFVITDKVVNPNG---------------KSNGEFGSRGMQLSATNYAIHG 401
Query: 146 ECA--------SAGCYAMNNKQMQEIYAIVRDS---LRGNMQSHIQIQAFPFRMTSKNMQ 194
S GC M + ++E++A+V + GN Q+ R TS+ Q
Sbjct: 402 TNKPDSIGKNESLGCVRMGKEDVEELFALVPSGTEVVIGNGGLPDQVLVPGSRFTSE-PQ 460
Query: 195 LYQNNPNYSF-WNM 207
Q NP ++ W
Sbjct: 461 HDQMNPRKTYHWLN 474
>gi|312880800|ref|ZP_07740600.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
12260]
gi|310784091|gb|EFQ24489.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
12260]
Length = 156
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 42/154 (27%)
Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
+ P ++I K ++ L +++ + + + S G K GD + PE
Sbjct: 16 SEAAEPAGEVWLKIEKGQHRLVVFR-----GQAVWDAFPVALGSNP-GQKQRRGDRRTPE 69
Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR---TGAD-------------LMIHGE 146
G + + +S+ + D + GA + IHG
Sbjct: 70 GEFSVVRIQ---DSRAW---------THDFRDGKGEIPGAYGPWFIRLKTGWDGIGIHGT 117
Query: 147 --------CASAGCYAMNNKQMQEIYAIVRDSLR 172
+ GC + N +Q++ +VR R
Sbjct: 118 HDPSSVGKDVTEGCIRLRNADLQKLRPLVRRGTR 151
>gi|227825038|ref|ZP_03989870.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905537|gb|EEH91455.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 224
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 33/172 (19%)
Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81
+ + A P + I + K + L + + +++ Y
Sbjct: 56 PQKAPEPAISPEKAKEADRKESISLDASKSYHIIVEKKAHRLSLLLGDT-----VVRSYG 110
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR----- 136
G G K GD P G + + ++ S + G + A
Sbjct: 111 CAIGKGGLGQKQRRGDNMTPVGTFTVD--EIDDASSWPHDFGDG---RGEIAGAYGPWFI 165
Query: 137 -------TGA---DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDS 170
+G + IHG AS GC ++N+ +QE+ ++V+
Sbjct: 166 SLDTEALSGGAWDGIGIHGTHDPQSIGTDASEGCIRLHNEDLQELRSVVKVG 217
>gi|284049125|ref|YP_003399464.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
20731]
gi|283953346|gb|ADB48149.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
20731]
Length = 241
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 45/187 (24%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFH----PTV------IRIFKNENILEIWKRNVDAE 73
+L +K E P+ + K+ +P P V + + K+++ L + D +
Sbjct: 65 ALPEKKETPVESLQKKQKEPKQVAPQPAAEQPLVPGKKYAVLVDKSDHKLYL----KDGD 120
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW----------------NNLNPNSK 117
+++ + G G K GD P G + I
Sbjct: 121 -TVVRTWGCAIGKGGLGQKERRGDNMTPVGTFRIDEIDDASGWTHDFGDGNGEIQGAYGP 179
Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIH--------GECASAGCYAMNNKQMQEIYAIVRD 169
+FLS++ D + + IH G AS GC ++N ++E+ +
Sbjct: 180 WFLSLDT-----EDLSQGNWDG-IGIHGTHDPASIGTDASEGCVRLDNANLRELEKVAYV 233
Query: 170 SLRGNMQ 176
+ +Q
Sbjct: 234 GMPVTIQ 240
>gi|255593471|ref|XP_002535877.1| conserved hypothetical protein [Ricinus communis]
gi|223521663|gb|EEF26508.1| conserved hypothetical protein [Ricinus communis]
Length = 197
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVRDS 170
+ + +PNE+DK + G + +HG + S GC + N + + ++++
Sbjct: 6 AYPLSYPNEWDKHRGKNGHGIWLHGTPSNTYSRPPRASDGCVVLTNPDISALAPVLQEG 64
>gi|312879709|ref|ZP_07739509.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
12260]
gi|310783000|gb|EFQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
12260]
Length = 198
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 37/143 (25%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----G 108
I++ K+ L +++ + L+K Y + G K + D PEG + +
Sbjct: 36 IKVDKSRLRLYLFQ----GKDTLVKSYPVAVGRGVGDVKKDRLDLITPEGVFKVRRVLQD 91
Query: 109 WNNLNPNSKY-----------FLSINIGFPNEFDKAHNRTGADLMIHGECA--------S 149
+ L + + + S I F N + + IHG + +
Sbjct: 92 ASQLVYDPAWFDEPGEPQKGVYGSKLISFYNPW---------QIAIHGTNSPRSVGRRAT 142
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC M N+ + + A V+ ++
Sbjct: 143 HGCIRMKNRDINTLVAYVKPGMK 165
>gi|304403864|ref|ZP_07385526.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
YK9]
gi|304346842|gb|EFM12674.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
YK9]
Length = 469
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 41/149 (27%)
Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101
Q K + P I + K+ + L + + VL++ YKI G + P
Sbjct: 316 QSKLSLSNEPLRIIVDKSVHRLAVVSGD-----VLVRSYKIGLGGG-----------RTP 359
Query: 102 EGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL-----MIHGECA-------- 148
EG + I NPN + D G L IHG
Sbjct: 360 EGEFNISEKVENPNGR------------SDGPFGSRGMTLSNTRYAIHGTDEPQSLGGDE 407
Query: 149 SAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
S GC M+ + ++E+Y +V R +Q
Sbjct: 408 SLGCIRMSREDVEELYDLVPLGTRVTIQK 436
>gi|88811972|ref|ZP_01127225.1| hypothetical protein NB231_06266 [Nitrococcus mobilis Nb-231]
gi|88790856|gb|EAR21970.1| hypothetical protein NB231_06266 [Nitrococcus mobilis Nb-231]
Length = 186
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 43/129 (33%)
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTG- 138
I G P GDE P G Y I + +S++ + + + +P D+A R G
Sbjct: 55 ISWGRGGVAPVHTAGDETTPLGHYRIT--RIKYHSRFHVFLELNYPTLTHLDRAF-RDGI 111
Query: 139 ----------ADLMIHGEC---------------------------ASAGCYAMNNKQMQ 161
+ HG+ + GC A+ + Q+
Sbjct: 112 VDTMTYQDLLNYALAHGQLPQATELGGHIGIHGLGRADPAMHARFHWTQGCIALTDNQID 171
Query: 162 EIYAIVRDS 170
+ V+
Sbjct: 172 RLLDYVQVG 180
>gi|28275296|ref|NP_783551.1| hypothetical protein SO_4656.3 [Shewanella oneidensis MR-1]
Length = 67
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 14/49 (28%)
Query: 137 TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSL 171
G +MIHG+ + GC A+ N +M EI+ V +
Sbjct: 13 PGGLIMIHGQHNGLGWLSFASQFFNWTNGCIAVTNSEMDEIWQAVDVGV 61
>gi|317473568|ref|ZP_07932858.1| ykud domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316898970|gb|EFV20994.1| ykud domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 226
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 65/228 (28%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57
M R+ ++ + + + + A S+ I + + IF
Sbjct: 2 MKKRWMAIVL-MAVLIWNMAGTNLETRTAYA-ASKQTIWQKKFSQYRYNKSVNQLIFVKY 59
Query: 58 --KNENILEIWKRNVDAEYVLLKEYKICAWS-GTFG-PKIETGDEQAPEG---------- 103
K++ + ++++ +LK C G G K GD + P G
Sbjct: 60 KKKSKATVYMYQKRDHKWKRILK----CKGYVGKKGIHKKREGDLKTPSGTFGFTGAFGI 115
Query: 104 ----------------FYY----------IGWNNLNPNSK----------YFLSINIGFP 127
Y+ I + Y+ + + +
Sbjct: 116 KKNPGAKMNYTRVNKYLYWCGDKKYYNRLIDVRKKKHRCRGEHLIDYKPHYYYGMFLNY- 174
Query: 128 NEFDKAHNRTGADLMIH---GECASAGCYAMNNKQMQEIYAIVRDSLR 172
N K G+ + +H + +AGC A++ K M++I R
Sbjct: 175 NPKHKYKK--GSAIFLHCKGKKPYTAGCIAVSRKNMKKIIKNAESGAR 220
>gi|307826415|ref|ZP_07656615.1| hypothetical protein MettuDRAFT_4462 [Methylobacter tundripaludum
SV96]
gi|307732533|gb|EFO03410.1| hypothetical protein MettuDRAFT_4462 [Methylobacter tundripaludum
SV96]
Length = 138
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
Y I LNPNS Y LS+ + +PN FD H R G
Sbjct: 97 YRIV--ELNPNSHYHLSMKLNYPNGFDLLHARQGG 129
>gi|227872445|ref|ZP_03990787.1| LamB/YcsF family protein [Oribacterium sinus F0268]
gi|227841705|gb|EEJ51993.1| LamB/YcsF family protein [Oribacterium sinus F0268]
Length = 253
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 77/239 (32%), Gaps = 84/239 (35%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN- 59
+T+ + LF L + L K ++ + ++ + T IRI K
Sbjct: 17 LTSVLILSLFCLSMIFTAFAGPGELYQK-----------KLESQTSTSNNDTEIRIGKKL 65
Query: 60 ----------------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK----IETGDEQ 99
++ L +W + D Y+ K Y + G G K + GD
Sbjct: 66 FQTEVGKKEDQLLVMLDHELSLWNKGEDRYYLQWKTY---SGYGRNGLKEGTERKEGDGT 122
Query: 100 APEGFYYIGWNNLNPNSK------------------------------------------ 117
P G Y I + P+S
Sbjct: 123 TPLGAYPISFAFGFPSSVNTKLPYKQIQKTSYWSGEKNTYNTWVESPTKIAGERLYSYKI 182
Query: 118 -YFLSINIGFPNEFDKAHNRTGADLMIHGECA----SAGCYAMNNKQMQEIYAIVRDSL 171
Y ++ IGF N+ R G+ + +H + S+GC + + M+++ ++++ L
Sbjct: 183 CYEKALAIGF-NQNPVVFGR-GSAIFLHIKAPDTWESSGCITIEKQAMEDLLPLLKEKL 239
>gi|114330567|ref|YP_746789.1| hypothetical protein Neut_0550 [Nitrosomonas eutropha C91]
gi|114307581|gb|ABI58824.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length = 181
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 49/162 (30%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
I I +E+ L + +++ +L + + GD Q P G + I W
Sbjct: 24 VWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQISW- 77
Query: 111 NLNPNSKYFLSINIGFPNEF--DKAHNRTG-------ADLM------------------- 142
+ + +++ I +PN D A + G ++M
Sbjct: 78 -VKQHDRFYRFYGINYPNREVADLALSE-GRISRQVWENIMNAIESTGLSPQDTSLGGYI 135
Query: 143 -----------IHGE-CASAGCYAMNNKQMQEIYAIVRDSLR 172
+H + GC A+ N Q+ ++ V+ R
Sbjct: 136 GIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQLNPWVKLGTR 177
>gi|295798113|emb|CAX68938.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured bacterium]
Length = 267
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 45/136 (33%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I++ K+EN L +++ + L+K Y++C P G + I +
Sbjct: 147 IKVDKSENKLRLYQ-----DDALIKTYRVCTGEK----------NSTPVGTFTIETKLED 191
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLM-------------IHGEC--------ASAGC 152
P ++ S + P +T +++ IHG AS+GC
Sbjct: 192 P--TWYKSPGVAIP-------PKTPENILGTRWMGFSLASYGIHGTTLPETIGTQASSGC 242
Query: 153 YAMNNKQMQEIYAIVR 168
M NK ++E+Y+IV
Sbjct: 243 IRMLNKDVEELYSIVP 258
>gi|34498927|ref|NP_903142.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472]
gi|34104776|gb|AAQ61133.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472]
Length = 208
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 70/219 (31%), Gaps = 69/219 (31%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M ++ +LL L +L+ +A+ + + P V K++
Sbjct: 1 MRAKFAVLLACLVQPCLAAVDDAALVLQAQTDGP---LQATHPNARHYGAPWVWVGVKSQ 57
Query: 61 --NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY------------ 106
+L+ W + KE+ + G +G Q P G++
Sbjct: 58 TLRLLDDW-------GRIQKEFTVSTAKNGVG--ETSGSYQTPRGWHAVCEKLGAGAEAN 108
Query: 107 --IGWNNLNPNSKYFLSINIGFPNE-------------------------FDKAHNRTGA 139
I + P KY +++ +PN+ +D+A
Sbjct: 109 TIIFRRQVTPW-KYTPELHVQYPNKDWILTRILWLCGQEPGLNQGGNVDSYDRA------ 161
Query: 140 DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDS 170
+ IHG +S GC M N+ + E++ V +
Sbjct: 162 -IYIHGAGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNG 199
>gi|167747918|ref|ZP_02420045.1| hypothetical protein ANACAC_02648 [Anaerostipes caccae DSM 14662]
gi|167652649|gb|EDR96778.1| hypothetical protein ANACAC_02648 [Anaerostipes caccae DSM 14662]
Length = 226
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 66/228 (28%), Gaps = 64/228 (28%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57
M + + + + + + + A S+ I + + IF
Sbjct: 1 MVKKRWMAIVLMAVLIWNMAGTNLETRTAYA-ASKQTIWQKKFSQYRYNKSVNQLIFVKY 59
Query: 58 --KNENILEIWKRNVDAEYVLLKEYKICAWS-GTFG-PKIETGDEQAPEG---------- 103
K++ + ++++ +LK C G G K GD + P G
Sbjct: 60 KKKSKATVYMYQKRDHKWKRILK----CKGYVGKKGIHKKREGDLKTPSGTFGFTGAFGI 115
Query: 104 ----------------FYY----------IGWNNLNPNSK----------YFLSINIGFP 127
Y+ I + Y+ + + +
Sbjct: 116 KKNPGAKMNYTRVNKYLYWCGDKKYYNRLIDVRKKKHRCRGEHLIDYKPHYYYGMFLNY- 174
Query: 128 NEFDKAHNRTGADLMIH---GECASAGCYAMNNKQMQEIYAIVRDSLR 172
N K G+ + +H + +AGC A++ K M++I R
Sbjct: 175 NPKHKYKK--GSAIFLHCKGKKPYTAGCIAVSRKNMKKIIKNAESGAR 220
>gi|121996921|ref|YP_001001708.1| ErfK/YbiS/YcfS/YnhG [Halorhodospira halophila SL1]
gi|121588326|gb|ABM60906.1| ErfK/YbiS/YcfS/YnhG [Halorhodospira halophila SL1]
Length = 195
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 41/119 (34%)
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-TG------------- 138
GD P G + I N +N S+Y L + + +P+ + R G
Sbjct: 75 RRRGDRTTPLGKFRI--NRINEQSEYHLFLGLDYPSLENARKARDAGTINQEEYLEFLDD 132
Query: 139 ------------------------ADLMIH-GECASAGCYAMNNKQMQEIYAIVRDSLR 172
D+ H + GC A+ + Q++ + ++V R
Sbjct: 133 FARLGRPPQGTALGGHIGIHGVGDGDVQFHRNVNWTDGCVALEDDQIEALASLVGIGTR 191
>gi|304313392|ref|YP_003812990.1| hypothetical protein HDN1F_37850 [gamma proteobacterium HdN1]
gi|301799125|emb|CBL47368.1| Hypothetical protein HDN1F_37850 [gamma proteobacterium HdN1]
Length = 248
Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 67/223 (30%)
Query: 5 YNILLFALFIFLNG-----CHHSRSLIDKAEHPLS------ENLIISMQKKRTSPFHPTV 53
+ L F + +FL+ + S+ + P Q + +P +
Sbjct: 24 FAALAFLIALFLSNSIRAEVQFTTSIRYTPQTPPPVQHTDAAQSSTPPQTSQQAPEAQPL 83
Query: 54 ---------IRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEG 103
+ + + L + + +K + + P GD P G
Sbjct: 84 PWVSPHQRWLLVDASSQTLSVMRGA-----QAVKRFDNVSLGRRGTQPIHYQGDTSTPLG 138
Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNE----------------------FDKAHNRT---- 137
YI ++ +S Y L ++ +P ++ +
Sbjct: 139 EMYID--DIRKSSNYTLFFSLNYPTAKHALIALKAGKITTLDYLDIFNAEREGRKPPYRT 196
Query: 138 --GADLMIHGE-----------CASAGCYAMNNKQMQEIYAIV 167
G ++ IHG + GC A++N+Q++ + V
Sbjct: 197 PLGGEIGIHGLGHAKQEMHREFNWTRGCVALDNQQIRTLAHYV 239
>gi|256004227|ref|ZP_05429210.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
2360]
gi|255991817|gb|EEU01916.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
2360]
gi|316939606|gb|ADU73640.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
1313]
Length = 289
Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 37/131 (28%)
Query: 48 PFHPTVIRIFKNE--NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P P+ +RI + L +++ + L+K Y + P P G +
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGK-PTTP--------TPRGTF 221
Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156
I +NP + + + P + IHG S GC M
Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP-----HYG-------IHGTNNPASIGTAASNGCIRMY 269
Query: 157 NKQMQEIYAIV 167
N+ + E++ +V
Sbjct: 270 NEDVNELFNLV 280
>gi|224536863|ref|ZP_03677402.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521529|gb|EEF90634.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus
DSM 14838]
Length = 181
Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 24/131 (18%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I I K E L + + + G K + GD + PEG + +
Sbjct: 39 IILISKQEMKLRLIDYKGQEIFCA----PVATGKN-VGDKRKQGDMRTPEGVFQVSDIQR 93
Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-------TG-ADLMIH--------GECASAGCYAMN 156
+ K+ G E D A+ G + IH G AS GC M
Sbjct: 94 ATDWKHDFGDGKG---EIDGAYGDFFIRLLVPGHKGIGIHGTHLPESIGTRASEGCIRMY 150
Query: 157 NKQMQEIYAIV 167
N+ ++++ +++
Sbjct: 151 NEDLKKLVSLI 161
>gi|281419482|ref|ZP_06250496.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
gi|281406888|gb|EFB37152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
Length = 289
Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 37/131 (28%)
Query: 48 PFHPTVIRIFKNE--NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P P+ +RI + L +++ + L+K Y + P P G +
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGK-PTTP--------TPRGTF 221
Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156
I +NP + + + P + IHG S GC M
Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP-----HYG-------IHGTNNPASIGTAASNGCIRMY 269
Query: 157 NKQMQEIYAIV 167
N+ + E++ +V
Sbjct: 270 NEDVNELFNLV 280
>gi|253573319|ref|ZP_04850662.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846847|gb|EES74852.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 486
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 33/146 (22%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN---SKYFLSINIGFPNEFD 131
VL++ Y + + PEG + I +NPN S F S + D
Sbjct: 361 VLIRSYPVGLGGS-----------RTPEGTFVISEKVINPNGRDSGEFGSRGM---QLSD 406
Query: 132 KAHNRTGAD----LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI-----QIQ 182
+ G + + G+ S GC M K ++E++ +V R + I +
Sbjct: 407 TNYAIHGTNEPDSI---GKDESLGCIRMGKKDVEELFDLVPKGTRVRIGKGILPKLKNVP 463
Query: 183 AFPFRMTSKNMQLYQNNPNYSF-WNM 207
A F + + Q NP+ ++ W
Sbjct: 464 AERFALGDR---QDQTNPHRTYHWLN 486
>gi|121535699|ref|ZP_01667503.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
Nor1]
gi|121305730|gb|EAX46668.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
Nor1]
Length = 238
Score = 51.4 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 34/157 (21%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95
L + T+P I I E ILE++ + L K+Y++ P
Sbjct: 40 ELAAIPNQPTTAPTGTVSIIIKVPERILEVY-----NDGQLYKKYRVAVGKSKT-P---- 89
Query: 96 GDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA------ 148
P G + + W + N S + + + P G IHG
Sbjct: 90 ----TPVGEWKVVWKDYNWGSGFGTRWMGLNVP------WGVYG----IHGTNNPWSIGR 135
Query: 149 --SAGCYAMNNKQMQEIYAIVRDSLRGN-MQSHIQIQ 182
S GC M NK ++E++ V + +++Q
Sbjct: 136 FASHGCIRMRNKDVEELFEWVPIGTEVKIVGPKVKVQ 172
>gi|125975485|ref|YP_001039395.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
gi|125715710|gb|ABN54202.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
Length = 289
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 37/131 (28%)
Query: 48 PFHPTVIRIFKNE--NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
P P+ +RI + L +++ + L+K Y + P P G +
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYR-----DGRLVKSYPVATGK-PTTP--------TPRGTF 221
Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156
I +NP + + + P + IHG S GC M
Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP-----HYG-------IHGTNNPASIGTAASNGCIRMY 269
Query: 157 NKQMQEIYAIV 167
N+ + E++ +V
Sbjct: 270 NEDVNELFNLV 280
>gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718]
gi|30139103|emb|CAD85967.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 182
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 48/174 (27%), Gaps = 45/174 (25%)
Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97
+ + R+ I I E L + + + L I GD
Sbjct: 11 LALIFSFRSYANSDIWILIDTLEQRLSVMR----GDKAQLAFNNIAIGRYGASSSRMKGD 66
Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPN--EFDKAHNR------------------- 136
Q P G + I W + +Y+ + FPN D A
Sbjct: 67 NQTPLGSFQISWIKQHH--RYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSR 124
Query: 137 -----------------TGADLMIHGE-CASAGCYAMNNKQMQEIYAIVRDSLR 172
D +H + GC A+ N Q+ E+ + ++ +
Sbjct: 125 LPPQDTPLGGYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIKIGTK 178
>gi|296133608|ref|YP_003640855.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
gi|296032186|gb|ADG82954.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
Length = 318
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 40/188 (21%)
Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
L ++ + + P + + L ++ + + K Y++ P
Sbjct: 117 LPLATKTRTKGPKGEVRLEVHIKTRTLIVYD-----DDKVFKTYRVAVGKNKT-P----- 165
Query: 97 DEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148
P G + I N + + + + P G IHG
Sbjct: 166 ---TPVGEWRIVRKAKNWGTGFGTRWLGLSVP------WGLFG----IHGTNKPWSIGSK 212
Query: 149 -SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL--YQNNPNYSFW 205
S GC M N+ ++E+Y V+ R + Q FP R + + Y+ + Y
Sbjct: 213 ASHGCIRMFNRDVEELYEWVKLGTR----VTVIGQVFPVRYEDRLVLRRGYKGSDVYQVQ 268
Query: 206 NMLKL-GH 212
L+ G+
Sbjct: 269 QKLRELGY 276
>gi|294101487|ref|YP_003553345.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM
12261]
gi|293616467|gb|ADE56621.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM
12261]
Length = 167
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 58/195 (29%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M + ILL F ++ +K + P I + K +
Sbjct: 1 MKIKNLILLTFFLCFFAAANNP----------------ALSGEKTYAHEPPDRIVVEKRK 44
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
+L +++ + + + + G K GD + P G + + ++ +S +
Sbjct: 45 FVLTLYREGKE-----VLSFPVAVGRN-KGNKQRVGDLRTPVGTFMV--ERIHDSSHW-- 94
Query: 121 SINIGFPNEFDKAHN---------------RTG-ADLMIH--------GECASAGCYAMN 156
D +TG + + IH G+ A+ GC +
Sbjct: 95 --------VHDFKDGKGPIKGAYGPWFIRLKTGWSGIGIHGTHDPGSIGQRATEGCVRLR 146
Query: 157 NKQMQEIYAIVRDSL 171
N ++ + V L
Sbjct: 147 NDHLELLVKHVEPGL 161
>gi|295394274|ref|ZP_06804504.1| possible secreted protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294972858|gb|EFG48703.1| possible secreted protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 342
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 61/156 (39%)
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPK-------IETGDEQAPEGFY-------- 105
+E+W+ D + +K FG K GD + P G Y
Sbjct: 166 GTVELWELRNDERWHRTHTFK----DARFGYKGLATASDKREGDGKTPMGQYRIPFTFGT 221
Query: 106 -------YIGWNNLNPNSKY---FLSIN----IGFPN----EFD---------------- 131
I + + N ++ S++ + PN D
Sbjct: 222 KAKPKGTRIEYRRADHNDQWCSRSGSLHYNTWMSVPNRSCPAKDAEVFSTIPQYSHVAVV 281
Query: 132 -----KAHNRTGADLMI--HGECASAGCYAMNNKQM 160
+ R G+ + + HG+ ++AGC ++ KQM
Sbjct: 282 DYNSARKAGR-GSAIFVHKHGKGSTAGCVSVTGKQM 316
>gi|269792192|ref|YP_003317096.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099827|gb|ACZ18814.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 228
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 38/143 (26%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI------ 107
I+I K++ L + K +K + + G K + D PEG + +
Sbjct: 36 IKIDKSKLRLYLMKGEEQ-----VKSFPVAIGRGKGDVKKDRLDLITPEGVFKVRRIVQD 90
Query: 108 ------GWNNLN----PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------S 149
+ N P + S I F N + + IHG + +
Sbjct: 91 ARNMVFDPSWFNEPGEPQKGVYGSKLISFYNPW---------QIAIHGTNSPSSIGKRVT 141
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC M N+ ++ + + R
Sbjct: 142 HGCIRMRNRDIETLVTYIGKGTR 164
>gi|52080005|ref|YP_078796.1| peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC
14580]
gi|52785379|ref|YP_091208.1| YkuD [Bacillus licheniformis ATCC 14580]
gi|319646218|ref|ZP_08000448.1| spore protein ykuD [Bacillus sp. BT1B_CT2]
gi|81385713|sp|Q65K99|YKUD_BACLD RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
protein YkuD homolog
gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC
14580]
gi|52347881|gb|AAU40515.1| YkuD [Bacillus licheniformis ATCC 14580]
gi|317391968|gb|EFV72765.1| spore protein ykuD [Bacillus sp. BT1B_CT2]
Length = 165
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 47/146 (32%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + N L +++R+ L+K Y I KI T Q P G + I
Sbjct: 56 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVG------KILT---QTPRGEFVIVNR 101
Query: 111 NLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
NP Y+LS+ + + IHG S GC M+N+
Sbjct: 102 QPNPGGPFGAYWLSL-------SKQHYG-------IHGTNNPSSIGKAVSRGCIRMHNRD 147
Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ E+ +IV + R + P
Sbjct: 148 VLELASIVPNGTR--------VSITP 165
>gi|313145199|ref|ZP_07807392.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313133966|gb|EFR51326.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 162
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ I K+E L + +D + L I +G K + GD + PEG + I
Sbjct: 21 ILLISKDEMKLRL----IDYKGQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQ- 74
Query: 113 NPNSKYFLSINIG-------FPNEFDKAHNRTGADLMIH--------GECASAGCYAMNN 157
SK+ G + N F + + IH G A+ GC + N
Sbjct: 75 -DASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKN 133
Query: 158 KQMQEIYAIVR 168
+++++ +++R
Sbjct: 134 SELEQLVSLIR 144
>gi|255007504|ref|ZP_05279630.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis
3_1_12]
Length = 184
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ I K+E L + +D + L I +G K + GD + PEG + I
Sbjct: 43 ILLISKDEMKLRL----IDYKGQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQ- 96
Query: 113 NPNSKYFLSINIG-------FPNEFDKAHNRTGADLMIH--------GECASAGCYAMNN 157
SK+ G + N F + + IH G A+ GC + N
Sbjct: 97 -DASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKN 155
Query: 158 KQMQEIYAIVR 168
+++++ +++R
Sbjct: 156 SELEQLVSLIR 166
>gi|253563984|ref|ZP_04841441.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251947760|gb|EES88042.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|301161709|emb|CBW21249.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis
638R]
Length = 183
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ I K+E L + +D + L I +G K + GD + PEG + I
Sbjct: 43 ILLISKDEMKLRL----IDYKGQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQ- 96
Query: 113 NPNSKYFLSINIG-------FPNEFDKAHNRTGADLMIH--------GECASAGCYAMNN 157
SK+ G + N F + + IH G A+ GC + N
Sbjct: 97 -DASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKN 155
Query: 158 KQMQEIYAIVR 168
+++++ +++R
Sbjct: 156 SELEQLVSLIR 166
>gi|53711980|ref|YP_097972.1| hypothetical protein BF0691 [Bacteroides fragilis YCH46]
gi|60680184|ref|YP_210328.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis
NCTC 9343]
gi|52214845|dbj|BAD47438.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis
NCTC 9343]
Length = 183
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
++ I K+E L + +D + L I +G K + GD + PEG + I
Sbjct: 43 ILLISKDEMKLRL----IDYKGQELFTADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQ- 96
Query: 113 NPNSKYFLSINIG-------FPNEFDKAHNRTGADLMIH--------GECASAGCYAMNN 157
SK+ G + N F + + IH G A+ GC + N
Sbjct: 97 -DASKWKHDFGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKN 155
Query: 158 KQMQEIYAIVR 168
+++++ +++R
Sbjct: 156 SELEQLVSLIR 166
>gi|325981386|ref|YP_004293788.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
gi|325530905|gb|ADZ25626.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
Length = 178
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 43/115 (37%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA------------------HNRTG 138
D++ P G + +GW +N S+Y+ + +PN D A ++
Sbjct: 62 DDKTPLGRFKVGW--VNEKSRYYRFFGLDYPN-LDTAKRALEENRIDEETWLSIKQAKSR 118
Query: 139 A---------------------DLMIHGE-CASAGCYAMNNKQMQEIYAIVRDSL 171
D IH + + GC A+ N+Q+ ++ ++ +
Sbjct: 119 GKTPPQDTLLGGHIGIHGIGRGDQEIHHKYNWTNGCVALTNEQIDQLGKWIKPGV 173
>gi|260593416|ref|ZP_05858874.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319]
gi|260534692|gb|EEX17309.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319]
Length = 330
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
I + K + L ++ + L+ Y CA+S G K + GD + P +
Sbjct: 98 LFIVMSKKDYYLYVY-EPQGKDTTLIARYD-CAFSLKKGQKEKEGDMRTP---------H 146
Query: 112 LNPNSKYFLSINIGFPN-EFDKAHNR---------------TG-ADLMIHGECA------ 148
++ + + + N E D R G + + IHG
Sbjct: 147 CTIDNPFHVQQIVSASNWEHDFGDGRGKIKSYGDYFLRLKTPGHSGIGIHGSTNNRESVP 206
Query: 149 ---SAGCYAMNNKQMQEIYA-IVRDSLRGNMQSHIQIQAFPFR---MTSKNMQLYQ 197
S GC + ++ ++++ + ++ +++ + +PF M + ++ +
Sbjct: 207 GRASEGCIRLKDEDIKDLSENYATEGMKVVIKAE-NVDDYPFEIHAMKRQKIERKR 261
>gi|296329732|ref|ZP_06872217.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674129|ref|YP_003865801.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153230|gb|EFG94094.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412373|gb|ADM37492.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 167
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 39/133 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + L +++ N ++K Y I KI T Q P G +YI
Sbjct: 58 PYHIAVSIGAKTLTLYQNN-----QVIKTYPIAVG------KILT---QTPIGEFYIINR 103
Query: 111 NLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
NP Y+LS+ + G IHG S GC M+NK
Sbjct: 104 QRNPGGPFGAYWLSL----------SRQHYG----IHGTNNPSSIGKAVSKGCVRMHNKD 149
Query: 160 MQEIYAIVRDSLR 172
+ E+ +IV + R
Sbjct: 150 VIELASIVPNGTR 162
>gi|91201948|emb|CAJ75008.1| hypothetical protein kuste4246 [Candidatus Kuenenia
stuttgartiensis]
Length = 314
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 45/156 (28%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
+ +++ +K T I I K+E L + + +K+Y+I
Sbjct: 171 PDSRLNIGEKLKILKGKTKILISKSEFTLTVLLND-----RYVKQYRIGTGKND------ 219
Query: 95 TGDEQAPEGFYYIGWNNLNP--NSKY---FLSINIGFPNEFDKAHNR----------TGA 139
+ PEG + + NP S Y + + +E + R G
Sbjct: 220 ----KTPEGTFEVKNKMKNPTWYSPYGGVY-----SYGDEKNILGTRWIGFKEKENLAGF 270
Query: 140 DLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167
+ HG +S GC M N ++E++ V
Sbjct: 271 GI--HGTTMPETIGTASSDGCIRMKNSDVEEVFDFV 304
>gi|284047661|ref|YP_003398000.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
20731]
gi|283951882|gb|ADB46685.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
20731]
Length = 205
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 36/143 (25%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
+ I K E L + + ++ + G K +GD + PEG + + +
Sbjct: 70 LLIKKGEFTLYLLDHGEP-----VAKWPVALGKNP-GQKQVSGDMKTPEGTFPVD--EII 121
Query: 114 PNSKYFLSIN--------------IGFPNEFDKAHNRTGA--DLMIH--------GECAS 149
S + + I D + G + IH G AS
Sbjct: 122 DASSWSHDFHDGKGVIQHAYGPWFIS----LDTRNLSKGKWDGIGIHGTHDPASIGTRAS 177
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC + N +Q++ V+ ++
Sbjct: 178 EGCIRLENGNLQKLKPYVKVGMK 200
>gi|154685816|ref|YP_001420977.1| YkuD [Bacillus amyloliquefaciens FZB42]
gi|154351667|gb|ABS73746.1| YkuD [Bacillus amyloliquefaciens FZB42]
Length = 166
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 41/134 (30%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I ++ LE+++ L++ Y I KI T P G +YI
Sbjct: 57 PYSIIVYIGAKKLELYRLG-----RLIRTYPIAVG------KILT---TTPTGEFYIVNR 102
Query: 111 NLNPNS---KYFLSI-NIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158
P Y+LS+ I + G IHG S GC M N+
Sbjct: 103 QPKPGGPFGAYWLSLSKIHY-----------G----IHGTNNPSSIGKAVSKGCIRMYNQ 147
Query: 159 QMQEIYAIVRDSLR 172
+ E+ A V + R
Sbjct: 148 DVTELAATVPNGTR 161
>gi|311029721|ref|ZP_07707811.1| hypothetical protein Bm3-1_04054 [Bacillus sp. m3-13]
Length = 166
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 41/132 (31%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I I L + +++K Y I G + P G Y I
Sbjct: 56 PYSIEISITNRKLVL-----KGNGIIIKTYPIA-----VGRMLFE----TPVGNYVIVNR 101
Query: 111 NLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
NP + +LS+ + + G IHG S GC M N+
Sbjct: 102 QPNPGGPFGAMWLSLSKLSY-----------G----IHGTNDPSSIGKAVSRGCVRMYNQ 146
Query: 159 QMQEIYAIVRDS 170
+ ++ ++V +
Sbjct: 147 DVLQLASMVPNG 158
>gi|311067920|ref|YP_003972843.1| murein transglycosylase [Bacillus atrophaeus 1942]
gi|310868437|gb|ADP31912.1| murein transglycosylase [Bacillus atrophaeus 1942]
Length = 168
Score = 48.3 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 39/133 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + + L +++ N L+K Y I KI T P G YYI
Sbjct: 59 PYHIVVSISGKTLRLFQNN-----RLIKTYPIAVG------KILT---TTPTGEYYIVNR 104
Query: 111 NLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ 159
NP SK I+ P + + G+ S GC M NK
Sbjct: 105 QPNPGGPFGAYWMSLSKLHYGIHGTNNP-----------SSI---GKAVSKGCIRMYNKD 150
Query: 160 MQEIYAIVRDSLR 172
+ E+ +IV + R
Sbjct: 151 VVELASIVPNGTR 163
>gi|78044166|ref|YP_359174.1| putative peptidoglycan-binding protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996281|gb|ABB15180.1| putative peptidoglycan-binding protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 214
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 47/147 (31%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE--GFYYIGWN 110
+I I +L +++ N L+K+Y + GD + P G + I +
Sbjct: 27 IIVIETRTRLLYLFREN-----KLVKKYPVAL-----------GDLKTPTPIGCFKITFM 70
Query: 111 NLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
N S + FL +N+ IHG S GC M N+
Sbjct: 71 RKNWGSGFGSRFLGLNV------------PWGMYGIHGTNKPGSIGSYASHGCIRMLNRH 118
Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPF 186
++E+Y V ++Q + I PF
Sbjct: 119 VEELYEKV------HLQDQVIILGNPF 139
>gi|289522182|ref|ZP_06439036.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289504018|gb|EFD25182.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 225
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 24/103 (23%)
Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI-------NIGFPNEFDKAH 134
+ G K++ GD + PEG +Y+ +S ++ S IG+ +
Sbjct: 115 VATGRNP-GQKLKVGDMRTPEGVFYV---KSIEDSSFWGSYVDKATKERIGY-GPY-FIR 168
Query: 135 NRTG-ADLMIH----------GECASAGCYAMNNKQMQEIYAI 166
TG + IH G AS GC M N + E+ ++
Sbjct: 169 LETGWKGIGIHGTDDEHLHEIGTDASHGCIRMANDDLLEVVSM 211
>gi|186682714|ref|YP_001865910.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
gi|186465166|gb|ACC80967.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
Length = 182
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 59/190 (31%), Gaps = 41/190 (21%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHP--------T 52
M + IL I + + LS N I+ Q + P
Sbjct: 1 MFLKTKILFLITIIVC----FTEGFLSGYFKKLSSNKAITQQSQSPPKIPPSKNNTTHKI 56
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
IR+ + + +++ +LK + I + P G Y + +
Sbjct: 57 SIRVKRGARQVYVYQDK-----QVLKSFPIAIGKSG---------WETPLGNYQVIYMKK 102
Query: 113 NPNSKYFLSINIGFP---NEFDKA----HNRTGADLMIHGEC--------ASAGCYAMNN 157
NP K F + NI P N K + L HG S GC M N
Sbjct: 103 NPIFKNFKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHGTNQDKLIGKAVSHGCIRMLN 162
Query: 158 KQMQEIYAIV 167
K + +Y +V
Sbjct: 163 KDVIALYELV 172
>gi|295401784|ref|ZP_06811749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976151|gb|EFG51764.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 111
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 22/112 (19%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINI 124
++ + + L+K Y I P P G Y I NP + L + +
Sbjct: 12 YQLKLYDGHRLIKVYPIAVGK-MLTP--------TPSGIYTIINKQRNPGGAFGVLWLGL 62
Query: 125 GFPNEFDKAHNRTG----ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
P + G + + G+ S GC M N + E+ ++V R
Sbjct: 63 SRP-----HYGIHGTNNPSSI---GKNVSRGCIRMYNHDVIELSSMVPVGTR 106
>gi|153954823|ref|YP_001395588.1| hypothetical protein CKL_2205 [Clostridium kluyveri DSM 555]
gi|146347681|gb|EDK34217.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 126
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 35/126 (27%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I + L ++K + K Y + P P G + I +N
Sbjct: 21 ITINRAARRLTLYKNG-----KVYKTYPVAVGKSGT-P--------TPAGTFRIINKQIN 66
Query: 114 PNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164
P Y + + A + IHG S GC M NK + E++
Sbjct: 67 PGGPYGARWMGLS-------AKG-----IGIHGTNNPHSIGSYVSNGCIRMYNKDVIELF 114
Query: 165 AIVRDS 170
IV
Sbjct: 115 NIVPVG 120
>gi|219855282|ref|YP_002472404.1| hypothetical protein CKR_1939 [Clostridium kluyveri NBRC 12016]
gi|219569006|dbj|BAH06990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 130
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 35/126 (27%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I + L ++K + K Y + P P G + I +N
Sbjct: 25 ITINRAARRLTLYKNG-----KVYKTYPVAVGKSGT-P--------TPAGTFRIINKQIN 70
Query: 114 PNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164
P Y + + A + IHG S GC M NK + E++
Sbjct: 71 PGGPYGARWMGLS-------AKG-----IGIHGTNNPHSIGSYVSNGCIRMYNKDVIELF 118
Query: 165 AIVRDS 170
IV
Sbjct: 119 NIVPVG 124
>gi|28210382|ref|NP_781326.1| hypothetical protein CTC00656 [Clostridium tetani E88]
gi|28202819|gb|AAO35263.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88]
Length = 232
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 67/220 (30%), Gaps = 61/220 (27%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M I+ LF+ L C D I K+ + I + +E
Sbjct: 1 MKRHNRIISTLLFLVLLICPKVAKASD------LNRKSIQKNKEGYN------ILVDISE 48
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-F 119
+ + ++ + ++ Y I P +P G + I + N S +
Sbjct: 49 FKMYLIEKGSNKP---IRRYPIAGGK-PETP--------SPYGTWKITSKSANWGSGFGT 96
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSL 171
+ + P + G IHG S GC M NK ++E+Y V
Sbjct: 97 RWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELYKYVDVG- 145
Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211
+ + I P+ + +F LK G
Sbjct: 146 -----TIVVIYGGPYNL-----------SWNNF-RTLKPG 168
>gi|229496449|ref|ZP_04390165.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
35406]
gi|229316677|gb|EEN82594.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
35406]
Length = 319
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 71/213 (33%), Gaps = 73/213 (34%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY------ 106
I + K + ++ R E KEY CA + +G K + GD + PEGF+Y
Sbjct: 101 FIVVDKASMRVLLYNRYGVKE----KEYT-CACARNYGHKAKKGDCRTPEGFFYAGETFD 155
Query: 107 -IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-------AD----LMIHGECA------ 148
W + N G+ + + G D + IHG CA
Sbjct: 156 STDWLYTDDN---------GYTSP---VRGQYGPRFIRIKGDKNLPVGIHGTCAPWALGR 203
Query: 149 --SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
S GC ++N + E+ V Q ++ I P K+M W
Sbjct: 204 RCSHGCVRIHNDNILELVKYV--------QPNMPIIINP---GPKDM-----------WV 241
Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239
G + P I I + V K TI
Sbjct: 242 NESEG-------REIPVITIDDNP-VVAKPHTI 266
>gi|282855703|ref|ZP_06265010.1| secreted protein [Pyramidobacter piscolens W5455]
gi|282586435|gb|EFB91696.1| secreted protein [Pyramidobacter piscolens W5455]
Length = 220
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 57/163 (34%)
Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFG---PKIETGDEQAPEGFYYI--------- 107
+ L +WK++ + K + G G K GD++ P G + I
Sbjct: 48 DRALSLWKKSDAGAWE--KTLEAPCGYGKLGLTENK-REGDKKTPVGAFPILHAFGNKPN 104
Query: 108 -----GWNNLNPNS-------------------------------KYFLSINIGFPNEFD 131
W + PNS +Y ++ +G+ N
Sbjct: 105 PGTAMKWRPVTPNSYWADDVNQPKIYNTWVESAKKIHGEHLADYYQYDYAMAVGY-NADP 163
Query: 132 KAHNRTGADLMIHGECA----SAGCYAMNNKQMQEIYAIVRDS 170
R G+ + +H + +AGC ++ + M E+ D
Sbjct: 164 AVPGR-GSAIFVHVKSRRHWTTAGCLSLERRDMIELLRQCHDG 205
>gi|312112233|ref|YP_003990549.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
gi|311217334|gb|ADP75938.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
Length = 111
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 27/124 (21%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I N++ L+++ + L+K Y I P P G Y I N
Sbjct: 5 IDISTNKHQLKLYDGH-----RLIKVYPIAVGK-MLTP--------TPSGIYTIINKQRN 50
Query: 114 PNSKY-FLSINIGFPNEFDKAHNRTG----ADLMIHGECASAGCYAMNNKQMQEIYAIVR 168
P + L + + P + G + + G+ S GC M N + E+ ++V
Sbjct: 51 PGGAFGVLWLGLSRP-----HYGIHGTNNPSSI---GKNVSRGCIRMYNHDVIELSSMVP 102
Query: 169 DSLR 172
R
Sbjct: 103 VGTR 106
>gi|225848549|ref|YP_002728712.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643366|gb|ACN98416.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 249
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 36/161 (22%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFK--NENILEIWKRNVDAEYVLLKEYKICAWSGTF 89
+ +N I + K+ P + ++ ++ L + ++ + ++ + +
Sbjct: 91 KVPKNTYIKVPLKKQLPEDFKLNTVYISTQDHRLY-YPIELEGKKYVI-TFPVGLGGE-- 146
Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE-------------FDKAHNR 136
D P+G + I +NP+ S I PN +A
Sbjct: 147 -------DFPTPKGEFKITERRVNPDWVVPPSAKINNPNLPPVVPYGSPENGLGTRALRL 199
Query: 137 TGADLMIHGECA----------SAGCYAMNNKQMQEIYAIV 167
G+ MIHG S GC + N ++ +Y V
Sbjct: 200 NGSSYMIHGTSKRSEKGVGMNISYGCIVLRNNDIERLYNFV 240
>gi|114320736|ref|YP_742419.1| ErfK/YbiS/YcfS/YnhG [Alkalilimnicola ehrlichii MLHE-1]
gi|114227130|gb|ABI56929.1| ErfK/YbiS/YcfS/YnhG [Alkalilimnicola ehrlichii MLHE-1]
Length = 187
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 45/160 (28%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
+ + L +++ + + + + +I P G + P G + I N
Sbjct: 30 IWLEVDAETARLTVYQGHRPVQ--VFE--RISVGRAGTAPFRYRGSNRTPSGEFRI--NR 83
Query: 112 LNPNSKYFLSINIGFPNEFDKAHN-RTG-----------ADLMIHGEC------------ 147
++ +S++ + + + +P +G L H
Sbjct: 84 ISHDSRFHIFLGLDYPTPRHAREALESGLFDEDDYRAYHEHLRRHRTPPQDTALGGHIGI 143
Query: 148 ---------------ASAGCYAMNNKQMQEIYAIVRDSLR 172
+ GC A+ N++++ + V R
Sbjct: 144 HGIGDGDPEIHDRFHWTQGCVAVTNEEIEALVEWVNIGTR 183
>gi|89099360|ref|ZP_01172237.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911]
gi|89085969|gb|EAR65093.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911]
Length = 170
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 54/161 (33%), Gaps = 45/161 (27%)
Query: 29 AEHPLSENLIISMQKKRTSPFHPT------VIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
A +S I ++ P P I I + L + K + L K Y +
Sbjct: 33 ANPQISNPNQIYQGQRVMIPGLPEPSAIPYSISITLSTRRLSLLKNGI-----LQKTYPV 87
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTGA 139
K+ T Q P G Y I NP + +LS+ ++ G
Sbjct: 88 GIG------KMLT---QTPPGDYVIVNREPNPGGPFGIMWLSL------------SKAGY 126
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ HG S GC MNN+ + E+ IV + R
Sbjct: 127 GI--HGTNNPASIGKAVSKGCVRMNNQDVLELSGIVPNGTR 165
>gi|295694715|ref|YP_003587953.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
gi|295410317|gb|ADG04809.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
Length = 276
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 33/125 (26%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I I +L +++R+ L++ + + P P G + I
Sbjct: 84 HIAIDTERRVLSLFQRD-----RLIRSFPVAVGK-PTTP--------TPVGDWVIVEKIA 129
Query: 113 NPNSKYFLS-INIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEI 163
NP + + + + PN G IHG S GC M+N+ + ++
Sbjct: 130 NPGGPFGAAWMRLSVPN---------GGY-GIHGTNNPGSVGRAVSHGCVRMHNEDVIQV 179
Query: 164 YAIVR 168
Y V
Sbjct: 180 YQTVP 184
>gi|321315163|ref|YP_004207450.1| murein transglycosylase [Bacillus subtilis BSn5]
gi|291483940|dbj|BAI85015.1| hypothetical protein BSNT_02352 [Bacillus subtilis subsp. natto
BEST195]
gi|320021437|gb|ADV96423.1| murein transglycosylase [Bacillus subtilis BSn5]
Length = 167
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 39/133 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + L ++ N ++K Y I KI T Q P G +YI
Sbjct: 58 PYHIAVSIGAKTLTLFLNN-----RVMKTYPIAVG------KILT---QTPTGEFYIINR 103
Query: 111 NLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
NP Y+LS+ + + IHG S GC M+NK
Sbjct: 104 QRNPGGPFGAYWLSL-------SKQHYG-------IHGTNNPASIGKAVSKGCIRMHNKD 149
Query: 160 MQEIYAIVRDSLR 172
+ E+ +IV + R
Sbjct: 150 VIELASIVPNGTR 162
>gi|119717403|ref|YP_924368.1| hypothetical protein Noca_3179 [Nocardioides sp. JS614]
gi|119538064|gb|ABL82681.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length = 220
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 16/89 (17%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG--------------WNN 111
W+R+ D + +E++ +G K GD ++P G Y I W
Sbjct: 56 WERDGDGHWSKAREFRSTIGLRGWG-KQREGDNRSPVGVYRIKVTFTTGSENPGEMPWRR 114
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGAD 140
P S S + N + +A T D
Sbjct: 115 RRPTSVVSSSAGPNY-NTWLEARGVTSGD 142
>gi|194014419|ref|ZP_03053036.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061]
gi|194013445|gb|EDW23010.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061]
Length = 166
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 47/188 (25%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT------VI 54
M RY + + + + KA +P + + P P I
Sbjct: 1 MVLRYTVKRGETLASIALDFRTTTEALKAANPSLQGREPLQNEVIIIPGLPDPNTIPYRI 60
Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114
+ + L ++ + L++ Y I P G YYI NP
Sbjct: 61 SVSISSKRLVLFSGS-----ELIRSYPIATGRIL---------NMTPTGSYYIVNRQPNP 106
Query: 115 NS---KYFLSI-NIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162
Y+LS+ + + G IHG S GC M N+ + E
Sbjct: 107 GGPFGAYWLSLSKVHY-----------G----IHGTNNPSSIGKAVSRGCIRMYNQNVIE 151
Query: 163 IYAIVRDS 170
+ +IV +
Sbjct: 152 LASIVPNG 159
>gi|221313601|ref|ZP_03595406.1| hypothetical protein BsubsN3_07732 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
Length = 167
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 34/109 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFD 131
++K Y I KI T Q P G +YI NP Y+LS+
Sbjct: 77 RVMKTYPIAVG------KILT---QTPTGEFYIINRQRNPGGPFGAYWLSL-------SK 120
Query: 132 KAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ + IHG S GC M+NK + E+ +IV + R
Sbjct: 121 QHYG-------IHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTR 162
>gi|221309274|ref|ZP_03591121.1| hypothetical protein Bsubs1_07796 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221318523|ref|ZP_03599817.1| hypothetical protein BsubsJ_07666 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322797|ref|ZP_03604091.1| hypothetical protein BsubsS_07777 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 159
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 34/109 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFD 131
++K Y I KI T Q P G +YI NP Y+LS+
Sbjct: 69 RVMKTYPIAVG------KILT---QTPTGEFYIINRQRNPGGPFGAYWLSL-------SK 112
Query: 132 KAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ + IHG S GC M+NK + E+ +IV + R
Sbjct: 113 QHYG-------IHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTR 154
>gi|16078468|ref|NP_389287.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str.
168]
gi|81342402|sp|O34816|YKUD_BACSU RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
protein YkuD
gi|2632225|emb|CAA10867.1| YkuD protein [Bacillus subtilis]
gi|2633775|emb|CAB13277.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str.
168]
Length = 164
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 34/109 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFD 131
++K Y I KI T Q P G +YI NP Y+LS+
Sbjct: 74 RVMKTYPIAVG------KILT---QTPTGEFYIINRQRNPGGPFGAYWLSL-------SK 117
Query: 132 KAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ + IHG S GC M+NK + E+ +IV + R
Sbjct: 118 QHYG-------IHGTNNPASIGKAVSKGCIRMHNKDVIELASIVPNGTR 159
>gi|323701623|ref|ZP_08113295.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
DSM 574]
gi|323533396|gb|EGB23263.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
DSM 574]
Length = 193
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 28/100 (28%)
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDK 132
L+K Y I P P G Y + +NP + + P
Sbjct: 28 GQLIKTYPIAVGK-PATP--------TPAGDYQVINKVVNPGGVLGTRWMGLNIP----- 73
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164
G + IHG S GC M+N ++E++
Sbjct: 74 -----GGNYGIHGTNNPSSIGNRVSLGCIRMHNSHVEELF 108
>gi|256839836|ref|ZP_05545345.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298375594|ref|ZP_06985551.1| ErfK/YbiS/YcfS/YnhG superfamily [Bacteroides sp. 3_1_19]
gi|256738766|gb|EEU52091.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298268094|gb|EFI09750.1| ErfK/YbiS/YcfS/YnhG superfamily [Bacteroides sp. 3_1_19]
Length = 167
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 31/116 (26%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI------------GWNNLNPNSKY-F 119
+ L + I +G K + D + PEG + I P Y
Sbjct: 34 QGDTLAVFPIACGRN-YGDKQQEWDFRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGP 92
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
+ P TG + IHG + GC ++N+ ++ +V
Sbjct: 93 RFFRLKTP-------GFTG--IGIHGTANPQVIPGRITMGCIRLSNEDLKAFSRLV 139
>gi|255013825|ref|ZP_05285951.1| hypothetical protein B2_07952 [Bacteroides sp. 2_1_7]
Length = 165
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 31/116 (26%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI------------GWNNLNPNSKY-F 119
+ L + I +G K + D + PEG + I P Y
Sbjct: 32 QGDTLAVFPIACGRN-YGDKQQEWDFRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGP 90
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
+ P TG + IHG + GC ++N+ ++ +V
Sbjct: 91 RFFRLKTP-------GFTG--IGIHGTANPQVIPGRITMGCIRLSNEDLKAFSRLV 137
>gi|150007649|ref|YP_001302392.1| hypothetical protein BDI_1004 [Parabacteroides distasonis ATCC
8503]
gi|149936073|gb|ABR42770.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 167
Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 31/116 (26%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI------------GWNNLNPNSKY-F 119
+ L + I +G K + D + PEG + I P Y
Sbjct: 34 QGDTLAVFPIACGRN-YGDKQQEWDFRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGP 92
Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167
+ P TG + IHG + GC ++N+ ++ +V
Sbjct: 93 RFFRLKTP-------GFTG--IGIHGTANPQVIPGRITMGCIRLSNEDLKAFSRLV 139
>gi|281357530|ref|ZP_06244018.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC
BAA-548]
gi|281316133|gb|EFB00159.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC
BAA-548]
Length = 422
Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 30/165 (18%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
++ + PL+ N++ ++ P P I++ K+ +L+++ A L + I
Sbjct: 260 DAIKISSRMPLANNILPLGKRLVIYPG-PWKIKVEKSARLLKLY-NEFPAGGRLYAVFDI 317
Query: 83 CAWSGTFG----------PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI-NIGFPNEFD 131
G G K++ D PEG + N YFL + G P D
Sbjct: 318 --GIGRLGRTPSADFVISTKLKNPDWYTPEGRVIKYGDPENMLGDYFLKLAPTGTP---D 372
Query: 132 KAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIVR 168
K G IHG S GC M+N ++ +Y IV
Sbjct: 373 KPLLGYG----IHGTRDDASVTKSQSNGCIRMHNADVETLYRIVP 413
>gi|282856102|ref|ZP_06265386.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455]
gi|282586029|gb|EFB91313.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455]
Length = 267
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 42/143 (29%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K L + + N ++ + + G K + GD + PEG + + +
Sbjct: 106 IYIDKAGFRLYLAEGN-----KVIDSWGVALGK-VTGNKAKAGDMRTPEGNFSVQ--QIQ 157
Query: 114 PNSKYFLSINIGFPNEFDKAHN---------------RTG-ADLMIH--------GECAS 149
S + D +TG + IH G AS
Sbjct: 158 DASSW----------THDFKDGKGVIKNAYGPWFIRLKTGWKGIGIHGTHDPDSIGTLAS 207
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC M N+ +Q++ +V ++
Sbjct: 208 EGCIRMRNEDLQKLKPLVAKGMK 230
>gi|308173372|ref|YP_003920077.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7]
gi|307606236|emb|CBI42607.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7]
gi|328553699|gb|AEB24191.1| L,D-transpeptidase [Bacillus amyloliquefaciens TA208]
Length = 166
Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 48/175 (27%)
Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69
+ L +S+I +H + NL T P+ I ++ L++++
Sbjct: 23 ISTAALLQANPSIQSVIYAGQHIIIPNLP----DPSTIPYS---IVVYIGAKKLQLYRLG 75
Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSI-NIG 125
L++ Y I KI T P G +YI P Y+LS+ +
Sbjct: 76 -----RLIRTYPIAVG------KILT---TTPTGEFYIVNRQPKPGGPFGAYWLSLSKLH 121
Query: 126 FPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172
+ G IHG S GC M+N+ + E+ A V + +
Sbjct: 122 Y-----------G----IHGTNDPSSIGKAVSKGCIRMHNQDVTELAATVPNGTK 161
>gi|226096828|dbj|BAH45270.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 474
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 43/136 (31%)
Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105
+PF P +++ + + L++ + L++ Y + PEG+Y
Sbjct: 325 VAPFEPLQLQLTTSTHTLKLISGS-----HLVRSYPVAIGKNDS----------TPEGYY 369
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG------ADLMIHGEC--------ASAG 151
I I P D + G +HG S G
Sbjct: 370 TIQQK-------------INQPRGHDNIYGTRGMVFQENGY-ALHGTNHPESIGSSVSLG 415
Query: 152 CYAMNNKQMQEIYAIV 167
C + N ++E+Y+ V
Sbjct: 416 CVRLYNAAVEELYSFV 431
>gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
gi|67857255|gb|EAM52495.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
Length = 191
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 62/202 (30%)
Query: 11 ALFIFLNGCHHSRSLID--KAEHPLSENLIISMQKKRTSPFHP-------TVIRIFKNEN 61
+L + + G + + E P +E + S ++ P P T + + E
Sbjct: 16 SLLLPIEGINKQAIASEGTTPETPPTELPVTSPVEEAAIPTAPENNQTLATHVVLNLKER 75
Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNP-- 114
+ +++ + ++ Y++ + P+G + + NP
Sbjct: 76 RVYVYQ-----DDQVIANYRVAIGRPG---------WETPKGNFSVIQMVEDPQWKNPWN 121
Query: 115 --------NSKYFLSIN---IGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYA 154
NS + IGF +R G + HG S GC
Sbjct: 122 GRVSAPGPNSP----LGERWIGF--------SREGGKYIGFHGTPGEHVMGQAVSHGCVR 169
Query: 155 MNNKQMQEIYAIVRDSLRGNMQ 176
M N+ ++E+Y +V++ + +Q
Sbjct: 170 MRNRDVKELYELVQNGIPVIVQ 191
>gi|205373543|ref|ZP_03226346.1| hypothetical protein Bcoam_09775 [Bacillus coahuilensis m4-4]
Length = 164
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 39/132 (29%)
Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
SP +P I I + ++ L ++K N + K Y I KI + + P G Y
Sbjct: 52 SPSNPFRILINRQDHTLTLYKDNT-----VYKTYPIAVG------KIAS---ETPIGNYI 97
Query: 107 IGWNNLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAM 155
I NP SK I+ P + + G+ S GC M
Sbjct: 98 IINKAPNPGGPFGAMWMSISKEHYGIHGTNNP-----------SSI---GKNVSLGCIRM 143
Query: 156 NNKQMQEIYAIV 167
NK + E+ I+
Sbjct: 144 YNKDVVELATII 155
>gi|323140901|ref|ZP_08075814.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067]
gi|322414639|gb|EFY05445.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067]
Length = 197
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 49/155 (31%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
+I I K L+++++ V+ + Y I G K TGD + P W +
Sbjct: 36 LICIHKQSYRLDVYQQGVE---QAVCSYPIAVAKNP-GDKQYTGDNRTP-----TSWGSA 86
Query: 113 NPNSKYFLSINIGFPNE----------------FDKAHNR---TGAD------------- 140
Y+ +G P+ D + + GA
Sbjct: 87 AAIPSYYTGAAVGVPSAQVPFRIEEICPAHYWTHDFSDGKGVIEGAYGPWFLSLDTGWIG 146
Query: 141 LMIH--------GECASAGCYAMNNKQMQEIYAIV 167
+ IH G AS GC + N +Q + +V
Sbjct: 147 IGIHGTHDPASIGTMASEGCIRLRNADIQSLKELV 181
>gi|268611112|ref|ZP_06144839.1| hypothetical protein RflaF_16660 [Ruminococcus flavefaciens FD-1]
Length = 160
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 41/146 (28%), Gaps = 54/146 (36%)
Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY--------------IGWN 110
++++N A +L+ I K GD P+G Y I +
Sbjct: 1 MYEKNGSAWNCVLETNGI-VGKNGVSDKSHEGDYCTPQGIYSLGFAFGTEPMNGLDIEYR 59
Query: 111 NLNP------------------------NSKYFLSINIGFPNEFDKAH----------NR 136
+N NS L I +P + +
Sbjct: 60 QINGNCYWVDDTESPLYNQWVESSNISWNSAEHL---IDYPQAYKYSVVINYNMSPVIAG 116
Query: 137 TGADLMIH--GECASAGCYAMNNKQM 160
G+ + +H +AGC A+ M
Sbjct: 117 KGSAIFLHCMTGNYTAGCVAVPENDM 142
>gi|138894958|ref|YP_001125411.1| hypothetical protein GTNG_1296 [Geobacillus thermodenitrificans
NG80-2]
gi|134266471|gb|ABO66666.1| hypothetical protein GTNG_1296 [Geobacillus thermodenitrificans
NG80-2]
Length = 191
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 54/152 (35%)
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI------------- 107
L ++++ +L ++ G K + GD + P G Y +
Sbjct: 19 GTLYLYEKQNGTWRKVLANIRVVVGKNGIG-KQKEGDGKTPAGVYPLGTAFGTAKKPAGL 77
Query: 108 ----------GWNNLNPNSK------YFL--------SI-NIGFP----------NEFDK 132
+ +P SK Y+ S + P N+
Sbjct: 78 KIPYRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRYNDSPI 137
Query: 133 AHNRTGADLMIHGECA----SAGCYAMNNKQM 160
+ G+ + +H + GC AM K +
Sbjct: 138 VKGK-GSAIFLHIWPRPSSYTLGCIAMAEKDL 168
>gi|288574492|ref|ZP_06392849.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570233|gb|EFC91790.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 135
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 39/124 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN-IGFPNEF-DK 132
L + + G K + GD + PEG + + S++ + + DK
Sbjct: 20 RLFGCWPVATGRN-IGQKRKVGDMRTPEGLFPVQ------------SVHDASYWQPYRDK 66
Query: 133 AHNRTGAD--------------LMIH----------GECASAGCYAMNNKQMQEIYAIVR 168
T + IH G AS GC M N+ + I +VR
Sbjct: 67 KTGDTVGYGPWFIRLKTPPWSGIGIHGTDEGHLSEIGTDASHGCIRMKNEDLLRIKEVVR 126
Query: 169 DSLR 172
+
Sbjct: 127 PGQK 130
>gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC
25259]
gi|74056730|gb|AAZ97170.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 164
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 44/158 (27%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
VI + L +W+R D + L++EY + + G ++G P G + + +
Sbjct: 5 VIDVDIARQRLYLWERFPDGDM-LIREYPVSTAANGAG--EQSGSYCTPRGRHRV-AQKI 60
Query: 113 NPNSKYFLSIN-------IGFPNEFDKAHNR------------------TGA-------D 140
+ + + I P + R G
Sbjct: 61 GAGAPLYAAFKARQATGEIWTPGLDAQNPGRDWILTRILWLEGLEPGRNQGGTVDSHDRY 120
Query: 141 LMIHGE--------CASAGCYAMNNKQMQEIYAIVRDS 170
+ IHG AS GC M N + E++ +V
Sbjct: 121 IYIHGTNEEHRIGTPASHGCVRMKNADVAELFELVEVG 158
>gi|225028593|ref|ZP_03717785.1| hypothetical protein EUBHAL_02872 [Eubacterium hallii DSM 3353]
gi|224954075|gb|EEG35284.1| hypothetical protein EUBHAL_02872 [Eubacterium hallii DSM 3353]
Length = 248
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 49/179 (27%)
Query: 36 NLIISMQKKRTSPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
++ +K ++ K++ + ++++ V+ ++ + G K
Sbjct: 61 TTLLQKYEKSKKVNQLIFVKYKGKSKANIVLYEK-VNGKFKKVFGCIGYVGKNGIG-KKR 118
Query: 95 TGDEQAPEGFYYIGWN---NLNPNS-----------------KYFLSI------------ 122
GD++ P G Y NP S +Y+ +
Sbjct: 119 EGDKKTPTGTYSFTKAFGIKKNPRSKIKYIKLNKYHYWSGDRRYYNQMIDIRKVKASRSG 178
Query: 123 --------NIGFPNEFDKAHN---RTGADLMIH---GECASAGCYAMNNKQMQEIYAIV 167
+ + D N + G+ + +H + GC A+ K M++I V
Sbjct: 179 EHLIDYKPHYNYALAIDYNKNCVYKKGSAIFLHCTGSNPYTGGCVAVKQKYMKKIMQTV 237
>gi|295703434|ref|YP_003596509.1| hypothetical protein BMD_1298 [Bacillus megaterium DSM 319]
gi|294801093|gb|ADF38159.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 170
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 31/145 (21%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
L +I + P I +F E LE+ + N+ K Y I A K
Sbjct: 37 LKPGQVIIIPNLPDKELIPYTIHVFIAEKQLELRRNNIIQ-----KVYPIAAG------K 85
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTG----ADLMIHG 145
+ + P G + I NP + +LS+ K++ G + + G
Sbjct: 86 MLSA---TPTGDFVIVNREPNPGGPFGTMWLSL-------SKKSYGIHGTNDPSSI---G 132
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDS 170
+ S GC M N Q+ E+ IV +
Sbjct: 133 KAVSKGCIRMYNAQVNELAQIVPNG 157
>gi|157692082|ref|YP_001486544.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032]
gi|157680840|gb|ABV61984.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032]
Length = 165
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 41/132 (31%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + + L ++ + L++ Y I P G YYI
Sbjct: 56 PYRISVSISSKRLVLFSGS-----ELIRSYPIATGRIL---------NMTPTGSYYIVNR 101
Query: 111 NLNPNS---KYFLSI-NIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158
NP Y+LS+ + + G IHG S GC M N+
Sbjct: 102 QPNPGGPFGAYWLSLSKVHY-----------G----IHGTNNPSSIGKAVSRGCIRMYNQ 146
Query: 159 QMQEIYAIVRDS 170
+ E+ +IV +
Sbjct: 147 NVIELASIVPNG 158
>gi|78042988|ref|YP_359059.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995103|gb|ABB14002.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 143
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 32/107 (29%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-----LSINIGFPNE 129
+K + + P P G Y I NP + + + P
Sbjct: 46 QKIKSWPVAVG-APSTP--------TPTGIYRIKNKISNPGGSPYGVLGSRWMGLTIP-- 94
Query: 130 FDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168
G + IHG S GC M NK ++E++ V
Sbjct: 95 --------GGNYGIHGTNNPASIGREVSRGCIRMLNKDIEELFPQVP 133
>gi|291614448|ref|YP_003524605.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
gi|291584560|gb|ADE12218.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
ES-1]
Length = 159
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 45/156 (28%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN--- 110
I I E LE++ D + L+ Y++ + G E G P G + I
Sbjct: 3 IAIHIPEQTLELF----DDDGKPLRRYRVSTGANGVG--EENGSFCTPRGKHVIRARIGA 56
Query: 111 NLNPNSKYFLSINIG--FPNEFDKA--------------------HNRTGA------DLM 142
N+ + G + E + +NR+G+ +
Sbjct: 57 GQPENTVFVKRRPTGEIYTPELGRQQPGRDWILTRILWLSGCESGYNRSGSCDTMRRYIY 116
Query: 143 IHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
IHG S GC M N M E++ +V+
Sbjct: 117 IHGTPDGTALGKPGSHGCIRMRNADMVELFELVKTG 152
>gi|205373921|ref|ZP_03226722.1| hypothetical protein Bcoam_12030 [Bacillus coahuilensis m4-4]
Length = 168
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 28/97 (28%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-----NE-------FDKAHNRTGADLM-I 143
D+ PEG + + NP Y+ ++I P N FD T + I
Sbjct: 58 DDLTPEGLFTVTVKAKNP---YYRKLDI--PGGDSNNPLGTRWIGFDAE--ETDGRIYGI 110
Query: 144 HGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172
HG S GC M N ++E++ + +
Sbjct: 111 HGTNRAESIGYYVSNGCVRMTNPSVEELFDRIPLGTK 147
>gi|253701515|ref|YP_003022704.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
gi|251776365|gb|ACT18946.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
Length = 281
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 28/125 (22%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P I + + E L ++ L + I G + P G + I
Sbjct: 111 EPKFIMVDQAEMFLGAYQYG-----KLAYSFPIALG--------IEG-KMVPNGTFRIDA 156
Query: 110 NNLNPNSKYFLSINIG--FPNEF------DKAHNRTGADLMIHGE-----CASAGCYAMN 156
+ S + IG +P + DK+ + IHG AS GC +
Sbjct: 157 ADRRHKSNLYQVEGIGRPYPMHYGLRFWVDKSKKEWPSY-WIHGRDLPGHPASHGCIGLY 215
Query: 157 NKQMQ 161
+++MQ
Sbjct: 216 DEEMQ 220
>gi|224825430|ref|ZP_03698535.1| ErfK/YbiS/YcfS/YnhG [Lutiella nitroferrum 2002]
gi|224602351|gb|EEG08529.1| ErfK/YbiS/YcfS/YnhG [Lutiella nitroferrum 2002]
Length = 183
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 51/161 (31%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I + L +++ + L+ + I G P GD P G ++I
Sbjct: 28 IEVDTAARTLTVYQGSRP-----LQRFDNISVGRGGVAPLHYHGDGSTPLGSFHI-MRIR 81
Query: 113 NPN--SKYFLSINIGFPNEFDKAHN------------------RTG----------ADLM 142
P+ ++ + +P R G +
Sbjct: 82 TPHVFGSFY---QLDYPRPEHAEQAFLDGRIDAGTRDDILLAARAGRLPPQFTALGGAIG 138
Query: 143 IHGE-----------CASAGCYAMNNKQMQEIYAIVRDSLR 172
IHG + GC A++N Q+ + + R +R
Sbjct: 139 IHGVGRGSYRIHRDFNWTNGCVALSNAQLHQFASWARLGMR 179
>gi|294498085|ref|YP_003561785.1| hypothetical protein BMQ_1318 [Bacillus megaterium QM B1551]
gi|294348022|gb|ADE68351.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 170
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 31/145 (21%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
L +I + P I +F E LE+ + N+ K Y I A K
Sbjct: 37 LKPGQVIIIPNLPDKELIPYTIHVFIAEKQLELRRNNIIQ-----KVYPIAAG------K 85
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTG----ADLMIHG 145
+ + P G + I NP + +LS+ K++ G + + G
Sbjct: 86 MLSA---TPTGDFIIVNREPNPGGPFGTMWLSL-------SKKSYGIHGTNDPSSI---G 132
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDS 170
+ S GC M N Q+ E+ IV +
Sbjct: 133 KAVSKGCIRMYNAQVNELAKIVPNG 157
>gi|50085556|ref|YP_047066.1| putative signal peptide [Acinetobacter sp. ADP1]
gi|49531532|emb|CAG69244.1| conserved hypothetical protein; putative signal peptide
[Acinetobacter sp. ADP1]
Length = 462
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 50/178 (28%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+ L KA + II + P +I K L ++ ++ ++ +
Sbjct: 300 KKLNPKASFKKAGEKIIVANVRNDLPEDIHLIIAHKGARQLYLF----NSRNQMIASFPA 355
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPNEF 130
S D +P G Y + NP Y LS+ G PN
Sbjct: 356 TIGSS---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA- 404
Query: 131 DKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
++ I HG S GC + N ++ VR +
Sbjct: 405 ------PVGNIWIGLSKKSFGIHGTPNPSAISKTASHGCIRLTNWDANDLGNKVRSGV 456
>gi|134299346|ref|YP_001112842.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
gi|134052046|gb|ABO50017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
Length = 255
Score = 44.4 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 33/125 (26%)
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN--LNPNSKYFL 120
L ++ + L+K Y + K+ PEG + I N + L
Sbjct: 137 LYLYDQGY-----LVKIYPVATGKE----KLF-----TPEGSFKIANKLPIKNADDPENL 182
Query: 121 S----INIGFPNEFDKA-----HNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163
+ + P+E DK G IHG AS GC +NN + E+
Sbjct: 183 YGPRWMGLAVPDEKDKRANNDKRAPVGHKYGIHGTNEPNSIGTHASGGCIRLNNHDILEL 242
Query: 164 YAIVR 168
Y +V
Sbjct: 243 YDMVP 247
>gi|187736183|ref|YP_001878295.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187426235|gb|ACD05514.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 156
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 53/164 (32%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN- 110
I + + E +LE +L + + + G E G + P G + I
Sbjct: 6 IRINLPRQELVLE-------KSGKILLQCPVSSGKAGTGH--EEGSGKTPTGHFRICKKI 56
Query: 111 -----------NLNPNSKYFLSINIGF------------------P-NEFDKAHNRTGAD 140
+ P +Y +I P N ++
Sbjct: 57 GDGEPEDTIFISRLPAGRYPTAIPKSLNEHSDFILTRILWLDGLEPHNANTRSR-----Y 111
Query: 141 LMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ IHG AS GC ++ + M ++A+ + + +Q
Sbjct: 112 IYIHGTNDTELLGTPASHGCIRLSPRDMMALFALAEEGMDVFIQ 155
>gi|332982349|ref|YP_004463790.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
gi|332700027|gb|AEE96968.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
Length = 266
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 61/205 (29%)
Query: 1 MTNRYNILLFALFIFLNG---------------------CHHSRSLIDKAEHPLSENLII 39
M I+LFAL + H+ + + +S+ LII
Sbjct: 1 MLRLRRIILFALIACITALSLWWHFTAPSEYTLWEERADIQHALTCEQPTQQAMSDRLII 60
Query: 40 SMQKKRTSPFHP---TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96
+ P I I +N+L + K N ++K+Y + G
Sbjct: 61 EGASYAVAVEPPGDGQQIFIDLEDNVLYLLKDN-----KVMKKYPVA-----------EG 104
Query: 97 DEQAPE--GFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC------ 147
+ P G + I + S + + + P G IHG
Sbjct: 105 KYKTPSPIGAWQIVSKRTDWGSGFGTRWLGLNVP------WGVYG----IHGTNKPDSVG 154
Query: 148 --ASAGCYAMNNKQMQEIYAIVRDS 170
+S GC+ M NK ++E++ +V+
Sbjct: 155 WSSSHGCFRMQNKHVEELFDLVKVG 179
>gi|167465780|ref|ZP_02330869.1| hypothetical protein Plarl_24988 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 488
Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 35/136 (25%)
Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
+ P I + + L + N +++ + + E+ P+
Sbjct: 334 AEDQLFEEPLRIVVDRRAYRLAVISGNT-----IIRTFPVGLGG-----------EKTPD 377
Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM--IHG--------ECASAGC 152
G + I NPN K + T +D + IHG + S GC
Sbjct: 378 GEFTITEKVRNPNGKSNGEFG---------SRGMTLSDTLYAIHGTNEPDSIGQDESKGC 428
Query: 153 YAMNNKQMQEIYAIVR 168
M + ++E++ +V
Sbjct: 429 IRMGKEDVEELFDLVP 444
>gi|121534863|ref|ZP_01666682.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
Nor1]
gi|121306462|gb|EAX47385.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
Nor1]
Length = 211
Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 21/142 (14%)
Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87
+A +S + + S I I K + L +++ N +++ +
Sbjct: 79 QAAEKISVDPAPQPPARGKSSLSRPHILITKAKRQLTLFESNTP-----FRQWPVAIGK- 132
Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADL-MIHG 145
P P G + I +NP + + D ++ G + + G
Sbjct: 133 PHTP--------TPVGNFAIAAKIMNPGGVLGTRWMGLN----HD-SYGIHGTNAPWLIG 179
Query: 146 ECASAGCYAMNNKQMQEIYAIV 167
+ S GC M+N +E++A++
Sbjct: 180 QMVSNGCIRMHNPHAEELFALI 201
>gi|322384184|ref|ZP_08057894.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321151076|gb|EFX44393.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 500
Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 35/136 (25%)
Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
+ P I + + L + N +++ + + E+ P+
Sbjct: 346 AEDQLFEEPLRIVVDRRAYRLAVISGNT-----IIRTFPVGLGG-----------EKTPD 389
Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM--IHG--------ECASAGC 152
G + I NPN K + T +D + IHG + S GC
Sbjct: 390 GEFTITEKVRNPNGKSNGEFG---------SRGMTLSDTLYAIHGTNEPDSIGQDESKGC 440
Query: 153 YAMNNKQMQEIYAIVR 168
M + ++E++ +V
Sbjct: 441 IRMGKEDVEELFDLVP 456
>gi|150392091|ref|YP_001322140.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
gi|149951953|gb|ABR50481.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
Length = 253
Score = 44.0 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 38/183 (20%)
Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKK-----RTSPFHPTV--IR 55
R +L FA+ I G + ++ P + + + +P ++
Sbjct: 5 RRLLLFFAIILIGTAGVLYIKNGSLFGGIPTPGGDVRGYNEYILWEHQMLEENPNYENVK 64
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115
I + ++ +++ N + LLK Y I + P +P G + +
Sbjct: 65 ILVDISVKKLYLLNGN---ELLKTYTIASGK-PSTP--------SPLGSWEVIQKARWGG 112
Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIV 167
+ + I P + G IHG ASAGC MNN+ ++++Y V
Sbjct: 113 AFGTRWMGINVP------WGKYG----IHGTDKPNSIGYNASAGCIRMNNRDVEDLYQYV 162
Query: 168 RDS 170
++
Sbjct: 163 KNG 165
>gi|147676430|ref|YP_001210645.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI]
gi|146272527|dbj|BAF58276.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 185
Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 28/105 (26%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKA 133
L+ Y + P P G Y I +NP + + P
Sbjct: 29 RLMNTYPVGVGK-PSTP--------TPTGKYSIIEKIMNPGGVLGTRWMGLSIP------ 73
Query: 134 HNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
G IHG S GC M N+ ++E++A V
Sbjct: 74 ----GGRYGIHGTNNPSSIGGYVSNGCIRMFNEDVEELFAKVEIG 114
>gi|114567403|ref|YP_754557.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338338|gb|ABI69186.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 332
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 27/153 (17%)
Query: 29 AEHPLSENLIIS------MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
P+ E L+ S +Q +I I L + + L+KEY +
Sbjct: 114 VNRPVWEALLFSDAGEPCLQGDSQDKRGRLLIEIDVASRKLVL-----TEDGKLVKEYPV 168
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHN--RTGA 139
P P G + + LN + + + + P H + G+
Sbjct: 169 AVGKSKT-P--------TPLGEWKVVHKGLNWGNGFGTRWMGLNVPWGIYGIHGTNKPGS 219
Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
+ G AS GC M N+ ++E+Y +V R
Sbjct: 220 -I---GSYASHGCIRMFNRHVEELYPLVPAGTR 248
>gi|207111612|ref|ZP_03245774.1| conserved hypothetical secreted protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 42
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 127 PNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
PN +D RTG + +HG + GC A+ N
Sbjct: 1 PNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 40
>gi|262278335|ref|ZP_06056120.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258686|gb|EEY77419.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 416
Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 251 AFLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 300
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 301 NQMIASFPATIGST---------DTPSPAGTYKVVGVARNPWYSYSPSNFVQGKNLKPLS 351
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 352 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 403
Query: 165 AIVRDSL 171
+ VR +
Sbjct: 404 SKVRSGV 410
>gi|295696513|ref|YP_003589751.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
gi|295412115|gb|ADG06607.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
Length = 216
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 57/213 (26%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
R P I + + + L +++ + + +++Y + D P G
Sbjct: 25 RAESGPPMRIEVDTDAHRLTVYR-----DGIAIRQYPVALGRP---------DSPTPIGH 70
Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAM 155
+ + N + + + P G IHG ASAGC M
Sbjct: 71 WKVINKYKNWGGGFGTRWLGLNVP------WGIYG----IHGTNRPHSIGWSASAGCIRM 120
Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR-MTS-----------------KNMQLYQ 197
N+ ++E+Y ++R + ++I P + M + + Y+
Sbjct: 121 RNQDVEELYEMIRVG------TPVRIIGDPLKYMRRLKDGDIGTDVWLVQDRLRRLGFYR 174
Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQ 230
N F + FE++ P +++ +
Sbjct: 175 GPCNGRFSLSTQAALKAFERSQHLPVDGVVSVR 207
>gi|258513554|ref|YP_003189776.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777259|gb|ACV61153.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 175
Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 38/130 (29%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I IL I N+ + Y P P G Y + +N
Sbjct: 8 INIHTGTRILNIKANNLS------RNYPAAVGK-PATP--------TPTGNYSVVNKIIN 52
Query: 114 PNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162
P +L +NI G IHG S GC M N+ ++E
Sbjct: 53 PGGMLGTRWLGLNI------------PGGVYGIHGTNNPDSIGKAVSNGCIRMQNQDIEE 100
Query: 163 IYAIVRDSLR 172
I+ + R
Sbjct: 101 IFPYIAIGTR 110
>gi|15644434|ref|NP_229486.1| hypothetical protein TM1686 [Thermotoga maritima MSB8]
gi|4982262|gb|AAD36753.1|AE001809_5 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 395
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 40/136 (29%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P I + + L ++ + VLLK Y + P G Y++
Sbjct: 262 NPVTIVVNLFSSKLALY-----YDGVLLKVYPVALGRSDA----------TPPGRYWVLR 306
Query: 110 NNLNPNSKY---FLS-------INIGFPNEFDKAHNRTGADLMIHGECA--------SAG 151
++P + ++S + + D + IHG S G
Sbjct: 307 KEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISHG 359
Query: 152 CYAMNNKQMQEIYAIV 167
C M N+ ++EI A
Sbjct: 360 CIRMFNRDVEEIDAFA 375
>gi|291459130|ref|ZP_06598520.1| putative secreted protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418384|gb|EFE92103.1| putative secreted protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 266
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 59/151 (39%)
Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK----IETGDEQAPEGFYYI---- 107
I K + L +W + D + + EY + G G K GD P G + I
Sbjct: 90 ILKLGHRLSLWNKEEDGRWKKVAEYY--SGHGRNGFKKAEERREGDGTTPIGSFPILFSF 147
Query: 108 ----------GWNNLNPNSKY--------------------FLSINIGFP---------- 127
+ ++ NS + L I +P
Sbjct: 148 GQGDKPETEMSYRRISRNSYWSSGRKDYNSWVESGKKIEGEHL---IEYPICYQYAMAVG 204
Query: 128 -NEFDKAHNRTGADLMIHGECA----SAGCY 153
N+ R G+ + +H + S+GC
Sbjct: 205 FNQNPAVFGR-GSAIFLHIKAPDTWESSGCI 234
>gi|94968756|ref|YP_590804.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
gi|94550806|gb|ABF40730.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
Length = 205
Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 54/177 (30%)
Query: 35 ENLIISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+ + + + PT +I + + L + + + ++K Y + + P
Sbjct: 28 AQTVQATEARPMEAPRPTRLILVSIPDRKLALLE-----DDKVVKVYPVAVGKDST-P-- 79
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF---------------LSINIGFPNEFDKAHNRTG 138
+PEG + I + NP + Y + + +K +
Sbjct: 80 ------SPEGTFTIKSHVTNP-TYYHEGKVVAPGPQNPLGSRWMGLS-----EKGYG--- 124
Query: 139 ADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR--DSLRGNMQSHIQI-QAF 184
IHG AS GC M K ++E++ +V+ D + + Q+ Q F
Sbjct: 125 ----IHGTNAPKSIGKAASHGCIRMAKKDLEELFTLVKVGDGVDIRGERDEQMAQVF 177
>gi|295400837|ref|ZP_06810813.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977100|gb|EFG52702.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 165
Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 44/151 (29%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + K +++ Y I
Sbjct: 40 PGQEIVIPHLPAKGSIPYT---IHISVSRRQLTLKKNGS-----IVRIYPIAVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC 147
K+ T P G + I NP + +LS+ I + G IHG
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAIWLSLSKIHY-----------G----IHGTN 127
Query: 148 A--------SAGCYAMNNKQMQEIYAIVRDS 170
S GC M+NK + E+ ++V +
Sbjct: 128 NPSSIGKYVSKGCIRMHNKDVLELASLVPNG 158
>gi|148270116|ref|YP_001244576.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
gi|147735660|gb|ABQ47000.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
Length = 382
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 40/136 (29%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P I + + L ++ + VLLK Y + P G Y++
Sbjct: 249 NPVTIVVNLFSSKLALY-----YDGVLLKVYPVALGRSDA----------TPPGRYWVLR 293
Query: 110 NNLNPNSKY---FLS-------INIGFPNEFDKAHNRTGADLMIHGECA--------SAG 151
++P + ++S + + D + IHG S G
Sbjct: 294 KEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRISHG 346
Query: 152 CYAMNNKQMQEIYAIV 167
C M N+ ++EI A
Sbjct: 347 CIRMFNRDVEEIDAFA 362
>gi|61680534|pdb|1Y7M|A Chain A, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A
Resolution
gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A
Resolution
Length = 164
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 34/109 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFD 131
+ K Y I KI T Q P G +YI NP Y+LS+
Sbjct: 74 RVXKTYPIAVG------KILT---QTPTGEFYIINRQRNPGGPFGAYWLSL--------- 115
Query: 132 KAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ G IHG S GC +NK + E+ +IV + R
Sbjct: 116 -SAAHYG----IHGTNNPASIGKAVSKGCIRXHNKDVIELASIVPNGTR 159
>gi|148264085|ref|YP_001230791.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
gi|146397585|gb|ABQ26218.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
Length = 278
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 25/82 (30%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT---------GAD---LMIH 144
D + P G Y + + N S + D+ GAD IH
Sbjct: 150 DHETPVGVYQVDARHRNHTSSLYK--------TEDQTAQYPMDNAIRFHVGADNVSYWIH 201
Query: 145 -----GECASAGCYAMNNKQMQ 161
G+ AS GC ++++ MQ
Sbjct: 202 ARDLPGKPASHGCVGLSDESMQ 223
>gi|294669067|ref|ZP_06734153.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309059|gb|EFE50302.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 46
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 8/40 (20%)
Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
+ GC A+ + ++ E+YA+V+ +I+ P
Sbjct: 15 RDWTHGCIAVTDGEIDELYALVK--------PQAEIEILP 46
>gi|319649778|ref|ZP_08003931.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2]
gi|317398532|gb|EFV79217.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2]
Length = 165
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 39/138 (28%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + + + L + + K Y I K+ T Q P G + I
Sbjct: 56 PYTIIVSRGKRSLTLLYNG-----AIQKVYPIAVG------KMLT---QTPIGEFVIVNR 101
Query: 111 NLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
NP Y +LS+ ++ G + HG S GC M N+
Sbjct: 102 EPNPGGPYGVMWLSL------------SKAGYGI--HGTNNPSSIGQSVSQGCIRMYNQD 147
Query: 160 MQEIYAIVRDSLRGNMQS 177
+ E+ IV + R +Q
Sbjct: 148 VLELSRIVPNGTRVRIQP 165
>gi|328911454|gb|AEB63050.1| L,D-transpeptidase [Bacillus amyloliquefaciens LL3]
Length = 160
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 41/130 (31%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I ++ L++++ L++ Y I KI T P G +YI
Sbjct: 57 PYSIVVYIGAKKLQLYRLG-----RLIRTYPIAVG------KILT---TTPTGEFYIVNR 102
Query: 111 NLNPNS---KYFLSI-NIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158
P Y+LS+ + + G IHG S GC M+N+
Sbjct: 103 QPKPGGPFGAYWLSLSKLHY-----------G----IHGTNDPSSIGKAVSKGCIRMHNQ 147
Query: 159 QMQEIYAIVR 168
+ E+ A V
Sbjct: 148 DVTELAATVP 157
>gi|218459355|ref|ZP_03499446.1| hypothetical protein RetlK5_07637 [Rhizobium etli Kim 5]
Length = 79
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 17/95 (17%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M N+ +L +++ + + + + +IR++K+E
Sbjct: 1 MRNKVVVLAIVAVGLFA---YTKVMASIGSGSPPPDAPVDQRAD--------LIRVYKSE 49
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIE 94
+ + K + + Y+I S GPK
Sbjct: 50 RRMVLLKGDAP-----IATYQISLGSAADAGPKQR 79
>gi|320162414|ref|YP_004175639.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1]
gi|319996268|dbj|BAJ65039.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1]
Length = 358
Score = 42.9 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 33/137 (24%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEY----KICAWSGTFGPKIETGDEQAPEGFY 105
P + +E+W ++ L+ Y + G K GD P+G Y
Sbjct: 209 APLAETVPPEAKRIEVWLKD-----QLVIAYENDEPVLITRAATGGKFIDGDYSTPQGRY 263
Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG---------ADLMIHGE--------CA 148
S++ S ++ PN +D G + + HG
Sbjct: 264 LTNRKRP---SRHMASGDLAAPNSYDL----PGVPWVCYLTESGISFHGTYWHNDFGKPR 316
Query: 149 SAGCYAMNNKQMQEIYA 165
S GC ++ + IY
Sbjct: 317 SHGCINLSPAAARWIYR 333
>gi|325122922|gb|ADY82445.1| ATP synthase [Acinetobacter calcoaceticus PHEA-2]
Length = 412
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 247 AFLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 296
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 297 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLS 347
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 348 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 399
Query: 165 AIVRDSL 171
VR +
Sbjct: 400 NKVRSGV 406
>gi|293609704|ref|ZP_06692006.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828156|gb|EFF86519.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 415
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 250 AFLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLS 350
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402
Query: 165 AIVRDSL 171
VR +
Sbjct: 403 NKVRSGV 409
>gi|299769283|ref|YP_003731309.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
gi|298699371|gb|ADI89936.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
Length = 412
Score = 42.9 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 247 AFLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 296
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 297 NQMIASFPATIGST---------DTPSPAGTYKVVGVARNPWYSYSPSNFVQGKNLKPLS 347
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 348 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 399
Query: 165 AIVRDSL 171
VR +
Sbjct: 400 NKVRSGV 406
>gi|294628082|ref|ZP_06706642.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292831415|gb|EFF89764.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 249
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 61/210 (29%)
Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI---------RIFKN--- 59
L L C +R+ + E P + + + P + RI +
Sbjct: 19 LLTALAACGDTRAEVRHRELPRPGGPSGTARPSPSPTVKPVHVPGVGDRLWQRIPADTRQ 78
Query: 60 ------------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
++ L ++++ + + + GDE++P G Y +
Sbjct: 79 IVTVYGDGENSPDSTLVLYEKR-GTTWQRSGSWPAHNGKRGWTTDHHEGDERSPVGVYTL 137
Query: 108 --------GWNNLNPN--------SKYF----------LSINIGF-------PNEFDKAH 134
P S Y+ I I + P++ +
Sbjct: 138 SDAGGILDDPGTRLPYTQDEDAFASPYYWDEAHWHDFDYVIAIDYNRLRGTRPDDPTRPL 197
Query: 135 NRT-GADLMIH--GECASAGCYAMNNKQMQ 161
++ G + +H + GC ++ M+
Sbjct: 198 GQSKGGGIWLHLDHGDGTLGCVSVPETAME 227
>gi|262372118|ref|ZP_06065397.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
gi|262312143|gb|EEY93228.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
Length = 402
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 52/181 (28%), Gaps = 50/181 (27%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
+ + + A + II + P +I K L ++ ++ ++
Sbjct: 237 NFLKKINPTATFKKAGEKIIVANVRNDLPEDIHLIVAHKGARQLYLF----NSRNQMIAS 292
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFP 127
+ S D +P G Y + NP Y LS+ G P
Sbjct: 293 FPATIGST---------DTPSPTGTYKVVGVAKNPWYSYSPSNFVQGNNLKPLSLPPG-P 342
Query: 128 NEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
N ++ I HG + S GC + N ++ VR
Sbjct: 343 NA-------PVGNIWIGLSKKSFGIHGTPSPSLISKTASHGCIRLTNWDANDLGNKVRSG 395
Query: 171 L 171
+
Sbjct: 396 V 396
>gi|291514044|emb|CBK63254.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL
8301]
Length = 152
Score = 42.5 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 26/103 (25%)
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139
Y I G K + GD + PEG + + + S + G + G+
Sbjct: 16 YPIACGRA-LGNKEKPGDMKTPEGLFSVQ--QIQDASAWTHDFGDG----KGEIRGAYGS 68
Query: 140 D-----------LMIH--------GECASAGCYAMNNKQMQEI 163
+ IH G A+ GC +NN + E+
Sbjct: 69 HFIRLKTPGHCGIGIHGTHDPASIGTRATEGCVRLNNSDLLEL 111
>gi|326201826|ref|ZP_08191697.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
2782]
gi|325988426|gb|EGD49251.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
2782]
Length = 123
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 51 PTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P I I ++ + L +++ + ++ K Y + P P G + I
Sbjct: 12 PVYSITINRSLHKLTLYR-----DSIVFKNYPVAVGK-PSTP--------TPVGTFRIVN 57
Query: 110 NNLNPNSKY-FLSINIGFPN-EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167
+NP + + + PN ++ + + G+ S GC M N+Q+ E+ +V
Sbjct: 58 RAINPGGPFGARWLGLNAPNCDYGIHGTNNPSSI---GKDVSNGCIRMFNEQVIELSNLV 114
>gi|322382702|ref|ZP_08056554.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153311|gb|EFX45747.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 114
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 39/132 (29%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I + + L ++ +++ Y + K T Q+P+G Y I
Sbjct: 6 THIDVDTSSKTLTLYDNG-----RVVRTYPVAVG------KQVT---QSPKGTYSIINKQ 51
Query: 112 LNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
NP SK I+ P + + G+ S GC M N+ +
Sbjct: 52 PNPGGPFGAFWMGLSKLHYGIHGTNDP-----------SSI---GKAVSHGCIRMYNQDV 97
Query: 161 QEIYAIVRDSLR 172
++ V +
Sbjct: 98 LDLEKRVPIGTK 109
>gi|167465388|ref|ZP_02330477.1| YkuD [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 112
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 39/132 (29%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111
T I + + L ++ +++ Y + K T Q+P+G Y I
Sbjct: 4 THIDVDTSSKTLTLYDNG-----RVVRTYPVAVG------KQVT---QSPKGTYSIINKQ 49
Query: 112 LNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160
NP SK I+ P + + G+ S GC M N+ +
Sbjct: 50 PNPGGPFGAFWMGLSKLHYGIHGTNDP-----------SSI---GKAVSHGCIRMYNQDV 95
Query: 161 QEIYAIVRDSLR 172
++ V +
Sbjct: 96 LDLEKRVPIGTK 107
>gi|189218234|ref|YP_001938876.1| hypothetical protein Minf_0217 [Methylacidiphilum infernorum V4]
gi|189185092|gb|ACD82277.1| Uncharacterized conserved protein [Methylacidiphilum infernorum V4]
Length = 314
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 73/226 (32%), Gaps = 64/226 (28%)
Query: 2 TNRYNIL-LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT---VIRIF 57
NR IL + L +FL L DK E L + I P +R F
Sbjct: 41 KNRVWILGITTLSVFLIFSLFLLYLADKIEKMLQKKFPIQQLITVVVPSSNVFEGYMRFF 100
Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSG----TFGPKIETGDEQAPEGFYYIG----- 108
+ E W + D VL+ + G G + + GD + P G + +G
Sbjct: 101 QRIGEGEQWIADSDFVPVLIGRNGLSWGKGLHEPQQGEQKKEGDGKTPAGIFNLGLIMGI 160
Query: 109 WNNLNPNSK---YFL--SIN--------------------IGFPNEFDKA---------- 133
+ L P S+ Y S++ P+ F+K
Sbjct: 161 ADELPPGSQWPLYHKKTSLDAWVEDPTLAHYNHLVTIQDSTSPPDWFEKQRLRIEDPHLE 220
Query: 134 ------HNRT------GADLMIHGE----CASAGCYAMNNKQMQEI 163
HN G+ + +H ++GC AM +++ E+
Sbjct: 221 WMVFIEHNYPDSIPGLGSAIFLHERYGEHVPTSGCVAMQKEKLVEL 266
>gi|170756349|ref|YP_001780527.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
Okra]
gi|169121561|gb|ACA45397.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
Okra]
Length = 125
Score = 42.5 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ K YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYKTYKVAVGK-PSTP--------TPKGTFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ +V
Sbjct: 80 ------GDYGIHGTNNPSSIGKSVSNGCIRMFNNQVIELSNLVPIG 119
>gi|288554783|ref|YP_003426718.1| murein binding protein [Bacillus pseudofirmus OF4]
gi|288545943|gb|ADC49826.1| murein binding protein [Bacillus pseudofirmus OF4]
Length = 165
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 39/138 (28%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + + L +++ L K Y I P G + I
Sbjct: 56 PYFIDVSISNRTLSLYENE-----QLQKVYPIAVGRML---------YDTPVGEFIIVNR 101
Query: 111 NLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQ 159
NP + +LS+ K++ IHG S GC M N+
Sbjct: 102 EPNPGGPFGTLWLSL-------SKKSYG-------IHGTNDPSSIGHAVSKGCIRMFNQD 147
Query: 160 MQEIYAIVRDSLRGNMQS 177
++E+ +IV + R ++
Sbjct: 148 VEELGSIVPNGTRVRIRP 165
>gi|187778003|ref|ZP_02994476.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
15579]
gi|187774931|gb|EDU38733.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
15579]
Length = 125
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ K YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYKTYKVAVGK-PSTP--------TPKGTFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ +V
Sbjct: 80 ------GDYGIHGTNTPSSIGKSVSNGCIRMFNNQVIELSNLVPIG 119
>gi|213422264|ref|ZP_03355330.1| hypothetical protein Salmonentericaenterica_32793 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 63
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67
+ F L + L C L+ + +S + K+ P I+IFK E L+++
Sbjct: 4 IAFFLAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYV 59
Query: 68 R 68
+
Sbjct: 60 K 60
>gi|212638810|ref|YP_002315330.1| erfK/srfK family protein [Anoxybacillus flavithermus WK1]
gi|212560290|gb|ACJ33345.1| Uncharacterized erfK/srfK family protein, probably secreted
[Anoxybacillus flavithermus WK1]
Length = 167
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 22/91 (24%)
Query: 100 APEGFYYIGWNNLNPNSKYFLSINI--GFPNE--------FDKAHNRTGADLMIHGECA- 148
PEG + + +NP Y+ NI G PN FD A G IHG
Sbjct: 60 TPEGLFTVTVKAVNP---YYRKKNIPGGAPNNPLGTRWIGFD-ARGTDGRTYGIHGTNRP 115
Query: 149 -------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ GC M+N+ ++ +Y V +
Sbjct: 116 ESIGRYITEGCVRMHNRDVEALYPNVPLGTK 146
>gi|308174184|ref|YP_003920889.1| hypothetical protein BAMF_2293 [Bacillus amyloliquefaciens DSM 7]
gi|307607048|emb|CBI43419.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
gi|328554128|gb|AEB24620.1| hypothetical protein BAMTA208_12285 [Bacillus amyloliquefaciens
TA208]
gi|328912519|gb|AEB64115.1| hypothetical protein LL3_02582 [Bacillus amyloliquefaciens LL3]
Length = 176
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 22/94 (23%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLMIHGE 146
D+ PEG + + +NP Y+ N+ G P N FD A G IHG
Sbjct: 58 DDLTPEGEFTVTVKAVNP---YYRKKNVEGGAPENPLGVRWIGFD-ARGTDGRIYGIHGT 113
Query: 147 C--------ASAGCYAMNNKQMQEIYAIVRDSLR 172
S GC M N+ + I+ I+ + +
Sbjct: 114 NREELIGGFVSNGCIRMKNRDVIHIFRIIPEGTK 147
>gi|301511179|ref|ZP_07236416.1| hypothetical protein AbauAB05_06353 [Acinetobacter baumannii AB058]
Length = 415
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 250 TFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 350
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402
Query: 165 AIVRDSL 171
VR +
Sbjct: 403 NKVRSGV 409
>gi|260549740|ref|ZP_05823957.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
gi|260407257|gb|EEX00733.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
Length = 418
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 50/178 (28%), Gaps = 50/178 (28%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+ L KA II + P +I K L ++ ++ ++ +
Sbjct: 256 KKLNPKATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLF----NSRNQMIASFPA 311
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPNEF 130
S D +P G Y + NP Y LS+ G PN
Sbjct: 312 TIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSLPPG-PNA- 360
Query: 131 DKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
++ I HG S GC + N ++ VR +
Sbjct: 361 ------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSGV 412
>gi|168178292|ref|ZP_02612956.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
2916]
gi|168184118|ref|ZP_02618782.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
gi|226948166|ref|YP_002803257.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
Kyoto]
gi|237794190|ref|YP_002861742.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
657]
gi|182670899|gb|EDT82873.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
2916]
gi|182672811|gb|EDT84772.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
gi|226841594|gb|ACO84260.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
Kyoto]
gi|229261214|gb|ACQ52247.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
657]
Length = 125
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ K YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYKTYKVAVGK-PSTP--------TPKGTFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ +V
Sbjct: 80 ------GDYGIHGTNNPSSIGKSVSNGCIRMFNNQVIELSNLVPIG 119
>gi|260467165|ref|ZP_05813343.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
gi|259029089|gb|EEW30387.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
WSM2075]
Length = 505
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 52/168 (30%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
II + P RI ++ E++ + L+ Y S
Sbjct: 343 PGTIIKVANFGKLVSTPVA-RIVADKGKKEVYAYDAGG--KLVAAYPATIGSA------- 392
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN--------EFDK 132
D +P G + + L+PN Y + NI F PN DK
Sbjct: 393 --DTPSPTGIHTVSRIALDPN--YTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDK 448
Query: 133 -AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
+ IHG S GC + N +E+ +V +
Sbjct: 449 PTYG-------IHGTPEPSKIGKTESHGCVRLTNWDARELAKLVSPGV 489
>gi|149180623|ref|ZP_01859127.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1]
gi|148851776|gb|EDL65922.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1]
Length = 165
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 39/133 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I + ++ L + + ++K Y I K+ + P G Y I
Sbjct: 56 PLSIHVSTSQRKLTLQRNGT-----VVKTYPIAVG------KMLSA---TPVGQYVIINK 101
Query: 111 NLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159
NP + ++S+ K + IHG S GC M N
Sbjct: 102 APNPGGPFGTMWMSL-------SKKHYG-------IHGTNNPASIGKAVSKGCIRMYNSD 147
Query: 160 MQEIYAIVRDSLR 172
++E+ + R
Sbjct: 148 VEELARTIPIGTR 160
>gi|323518861|gb|ADX93242.1| hypothetical protein ABTW07_2818 [Acinetobacter baumannii
TCDC-AB0715]
Length = 415
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 250 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 350
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402
Query: 165 AIVRDSL 171
VR +
Sbjct: 403 NKVRSGV 409
>gi|260556712|ref|ZP_05828930.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
gi|260409971|gb|EEX03271.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
Length = 418
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 253 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 302
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 303 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 353
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 354 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 405
Query: 165 AIVRDSL 171
VR +
Sbjct: 406 NKVRSGV 412
>gi|184158889|ref|YP_001847228.1| hypothetical protein ACICU_02569 [Acinetobacter baumannii ACICU]
gi|213158089|ref|YP_002320140.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
gi|215482781|ref|YP_002324982.1| hypothetical protein ABBFA_001071 [Acinetobacter baumannii
AB307-0294]
gi|239502499|ref|ZP_04661809.1| hypothetical protein AbauAB_09314 [Acinetobacter baumannii AB900]
gi|301347442|ref|ZP_07228183.1| hypothetical protein AbauAB0_14373 [Acinetobacter baumannii AB056]
gi|301596121|ref|ZP_07241129.1| hypothetical protein AbauAB059_09914 [Acinetobacter baumannii
AB059]
gi|332854140|ref|ZP_08435198.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
gi|332867906|ref|ZP_08437908.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
gi|332875748|ref|ZP_08443548.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
gi|183210483|gb|ACC57881.1| uncharacterized protein conserved in bacteria [Acinetobacter
baumannii ACICU]
gi|193077900|gb|ABO12790.2| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
gi|213057249|gb|ACJ42151.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
gi|213988538|gb|ACJ58837.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|322508867|gb|ADX04321.1| putative exported protein [Acinetobacter baumannii 1656-2]
gi|332728196|gb|EGJ59582.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
gi|332733679|gb|EGJ64837.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
gi|332736072|gb|EGJ67099.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
Length = 415
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 250 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 350
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402
Query: 165 AIVRDSL 171
VR +
Sbjct: 403 NKVRSGV 409
>gi|169795243|ref|YP_001713036.1| hypothetical protein ABAYE1105 [Acinetobacter baumannii AYE]
gi|169148170|emb|CAM86033.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
Length = 418
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 253 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 302
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 303 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 353
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 354 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 405
Query: 165 AIVRDSL 171
VR +
Sbjct: 406 NKVRSGV 412
>gi|126642408|ref|YP_001085392.1| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
Length = 396
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 231 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 280
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 281 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 331
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 332 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 383
Query: 165 AIVRDSL 171
VR +
Sbjct: 384 NKVRSGV 390
>gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 415
Score = 42.1 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 250 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S D +P G Y + NP Y LS
Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 350
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402
Query: 165 AIVRDSL 171
VR +
Sbjct: 403 NKVRSGV 409
>gi|134297972|ref|YP_001111468.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
gi|134050672|gb|ABO48643.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
Length = 192
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 45/155 (29%)
Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102
+R + I + ++ L K Y + T P P
Sbjct: 2 TERMMYRAGIELLIDPQSRQINVYIGK-----QLSKSYPVGVGKATT-P--------TPA 47
Query: 103 GFYYIGWNNLNPN----SKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SA 150
G Y + +P +++ L +NI G + IHG SA
Sbjct: 48 GNYQVVNKVTHPGGILGTRW-LGLNI------------PGGNYGIHGTSNPSSIGKLVSA 94
Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185
GC M N+ ++E++ ++ + ++I+A P
Sbjct: 95 GCIRMYNENVEELFPMIPVG------TPVEIKAVP 123
>gi|302390198|ref|YP_003826019.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
16646]
gi|302200826|gb|ADL08396.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
16646]
Length = 229
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 44/180 (24%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M ++ F + ++ S + + P P I I+ E
Sbjct: 1 MRKSIRVIAFMIIFLMSFYSPSPAYQPTSPKP------------PDKPQGDVSIVIYALE 48
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
L + K + + + D P G + I +
Sbjct: 49 RKLVVMVDGKP-----FKTFPVAVGTF---------DTPTPIGLFRITEKSKWGEGFGTR 94
Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ + P G IHG S GC M+N+ ++++Y V+ +
Sbjct: 95 WMRLSVP------WGTYG----IHGTNKPHSIGSFASHGCIRMHNRHVEQLYDWVKVGTK 144
>gi|170759637|ref|YP_001786273.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169406626|gb|ACA55037.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 125
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ K YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYKTYKVAVGK-PSTP--------TPKGNFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ +V
Sbjct: 80 ------GDYGIHGTNNPSSIGKSVSNGCIRMFNNQVIELSNLVPIG 119
>gi|299535205|ref|ZP_07048529.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1]
gi|298729326|gb|EFI69877.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1]
Length = 164
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 44/131 (33%), Gaps = 39/131 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I I N L ++K N+ L K+Y I G + P G + I
Sbjct: 55 PYHIEISTNNRWLRLYKNNI-----LQKQYPIA-----VGRMLHE----TPVGSFIIINK 100
Query: 111 NLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ 159
NP SK I+ P + + G S GC M N+
Sbjct: 101 APNPGGPFGTMWMSLSKEHYGIHGTNDP-----------SSI---GHAVSHGCIRMQNRD 146
Query: 160 MQEIYAIVRDS 170
++E+ +IV
Sbjct: 147 VEELASIVPIG 157
>gi|307304240|ref|ZP_07583992.1| hypothetical protein SinmeBDRAFT_2336 [Sinorhizobium meliloti
BL225C]
gi|307320545|ref|ZP_07599960.1| hypothetical protein SinmeDRAFT_4418 [Sinorhizobium meliloti AK83]
gi|306893821|gb|EFN24592.1| hypothetical protein SinmeDRAFT_4418 [Sinorhizobium meliloti AK83]
gi|306902708|gb|EFN33301.1| hypothetical protein SinmeBDRAFT_2336 [Sinorhizobium meliloti
BL225C]
Length = 60
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRD 169
+ H + GC A+ N +M EI +V +
Sbjct: 25 LTHMFDWTNGCIAVTNAEMDEIRDMVPN 52
>gi|327440243|dbj|BAK16608.1| uncharacterized protein [Solibacillus silvestris StLB046]
Length = 111
Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 22/103 (21%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKA 133
L+K Y I P P G Y I LNP + + L + + P
Sbjct: 21 KLIKAYPIAVGK-ILTP--------TPSGTYTIINKQLNPPAPFGVLWMGLSKP-----H 66
Query: 134 HNRTGAD----LMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
+ G + + G+ S GC M N + E+ + +
Sbjct: 67 YGIHGTNNPASI---GKNRSHGCIRMFNHDVLELSSRATIGTK 106
>gi|169830630|ref|YP_001716612.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637474|gb|ACA58980.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 266
Score = 41.7 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 33/133 (24%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K+ N L ++ E ++ Y + E PEG + +
Sbjct: 138 IIINKSANRLYFYQ---GGELAVI--YSVATGKRP---------EYTPEGTFTVVNKVSL 183
Query: 114 P-----NSKYFLS-INIGFPNEFDKAHN---RTGADLM--IHGEC--------ASAGCYA 154
P + ++ L + + P E D+ R + IHG AS GC
Sbjct: 184 PGDNDSDPRFGLRWLGLAVPCEKDRRRENDPRAPGGIKYGIHGTNEPDSIGTHASGGCVR 243
Query: 155 MNNKQMQEIYAIV 167
+ N+ + E++ +V
Sbjct: 244 LRNEDIVELFELV 256
>gi|146297696|ref|YP_001181467.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411272|gb|ABP68276.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 234
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 41/172 (23%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
+P +I + +++ L ++K + L K Y I P P G + I
Sbjct: 43 NPYLIFVSIDDSKLYVFKNGI-----LYKSYPISPGK-PSTP--------TPVGTFRIIS 88
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTG--ADLMIH--GECASAGCYAMNNKQMQEIYA 165
+ + + + + G + + G S GC M N ++E+++
Sbjct: 89 KAYWGDGFGGRWMGLN------VRYGKYGIHGTIYENYIGAHVSQGCVRMRNDDIKELFS 142
Query: 166 IVRDS------------LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFW 205
+ R ++ FP M + + F+
Sbjct: 143 YIPIGTTVILSEGAYGEFRNGFRT-----IFPGDTGDDVMAVQRRLKELGFY 189
>gi|296131671|ref|YP_003638918.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
gi|296030249|gb|ADG81017.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
Length = 126
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 33/129 (25%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
+ +IR+ +L + + N + Y + P P G Y I
Sbjct: 12 LYSNILIRVDVTNRLLYLERGNRTTQI-----YPVAVGK-PSTP--------TPPGTYSI 57
Query: 108 GWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNK 158
+NP + + P D + IHG S GC M N+
Sbjct: 58 IEKTVNPGGILGTRWMGLDIP---DGPYG-------IHGTWNRDSIGKAVSNGCIRMYNE 107
Query: 159 QMQEIYAIV 167
++E++ V
Sbjct: 108 DVEEVFRQV 116
>gi|297531502|ref|YP_003672777.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
gi|297254754|gb|ADI28200.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
Length = 165
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 44/151 (29%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + R ++ Y I
Sbjct: 40 PGQEIVIPHLPPKGSIPYT-IHISI--SRRQLTLKHRGRT-----IRTYPIGVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC 147
K+ T P G + I NP + +LS+ I + G IHG
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAMWLSLSKIHY-----------G----IHGTN 127
Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M+NK + E+ +IV +
Sbjct: 128 DPSSIGKYVSKGCIRMHNKDVLELASIVPNG 158
>gi|94496487|ref|ZP_01303064.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
gi|94424233|gb|EAT09257.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
Length = 347
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 65/211 (30%), Gaps = 65/211 (30%)
Query: 8 LLFALFIFLNGCHHSRSLIDKA--EHPLSE---------NLIISMQKKRTSPFHPTVIRI 56
L AL ++ A P+++ + S+ + P I +
Sbjct: 159 ALVALNSPTTQVGAGATIRVPAIDNQPVAQIEGDERGWGETLASLGVAKEQPQA-DHIVV 217
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNLNP 114
K+E +L+ + DA+ ++ ++ + S P G + I + NP
Sbjct: 218 DKSEGLLKAY----DADNRMIAQFPVTTGSQHDPL-----------PIGEWTIKGVSRNP 262
Query: 115 NSKYFLSINIGFPNEF-------DKAHNRTG-----ADLMI---------HGECA----- 148
Y P+ F +KA + G + I HG
Sbjct: 263 EFHYN-------PDLFWDASSKDEKAVLKPGPNGPVGVVWIDLSKDHYGIHGTPEPQTIG 315
Query: 149 ---SAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
S GC + N + +V+ ++ Q
Sbjct: 316 RTESHGCIRLTNWDAARLAQMVKTGVKAKFQ 346
>gi|150389053|ref|YP_001319102.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
gi|149948915|gb|ABR47443.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
Length = 280
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 39/145 (26%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
LS ++++ + + + I I + IL + + +L+ Y + P
Sbjct: 74 LSPDVMVDLPTEGYA------IDIDLEQRILTLKQYT-----EILQSYPVAVGK-PQTP- 120
Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--- 148
P G + I LNP + + I P G IHG A
Sbjct: 121 -------TPPGDWRIIQKTLNPGGPFGTRWMRINIP---------WGGY-GIHGTDAPES 163
Query: 149 -----SAGCYAMNNKQMQEIYAIVR 168
S GC M N+ ++ +Y IV
Sbjct: 164 IGTAASNGCIRMFNEDVEVLYDIVP 188
>gi|93006686|ref|YP_581123.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
gi|92394364|gb|ABE75639.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
Length = 171
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 58/168 (34%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG---------- 103
I I + L +++R ++ EY I G + ++G P G
Sbjct: 11 IVISIAQQTLTVYRRQ-----KVIAEYPISTAKNGIGSQQDSG--CTPLGQHIIAEKIGG 63
Query: 104 ----------------FYYIGWNNLNPNSKYFLS-------INIGFPNEFDKAHNRTGA- 139
Y LNP + LS + GF +K N G
Sbjct: 64 NAPSHTVFIGRIATGEIYNAELGALNPKRDWILSRILWLSGLEEGF----NKGSNSQGGC 119
Query: 140 -----DLMIHGECASA--------GCYAMNNKQMQEIYAIVRDSLRGN 174
+ IHG S GC M N+ + E++ + + N
Sbjct: 120 DTYHRYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEGTAVN 167
>gi|308049519|ref|YP_003913085.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
gi|307631709|gb|ADN76011.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
Length = 308
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 18/60 (30%)
Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
++ + + N + +IHG SAGC M ++E++ +VR
Sbjct: 184 HRALRLSYGN----------GEYLIHGTNHEFGIGMRVSAGCIRMRPNDIEELFELVRVG 233
>gi|315646088|ref|ZP_07899208.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
gi|315278287|gb|EFU41603.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
Length = 112
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 30/112 (26%)
Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINI 124
++ ++ ++ Y I K+ T Q P G Y I NP + + +
Sbjct: 13 YQLHLLDGDAVVHTYPIAVG------KMAT---QTPPGNYTIVTKEPNPGGPFGAYWLGL 63
Query: 125 GFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168
P + IHG S GC M N+ + ++ ++V
Sbjct: 64 SKP-----HYG-------IHGTNDPSSIGRSVSHGCIRMYNEDVVQLASLVP 103
>gi|294011303|ref|YP_003544763.1| hypothetical protein SJA_C1-13170 [Sphingobium japonicum UT26S]
gi|292674633|dbj|BAI96151.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 362
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 61/200 (30%), Gaps = 63/200 (31%)
Query: 18 GCHHSRSLIDKAEHPLSE---------NLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68
G + + A P++ + S+ + P I + K++ +L +
Sbjct: 186 GAGATIRVPAIANQPVARIEGDERGWGETLASLGVAKDQPQA-DHIVVDKSDGVLRAY-- 242
Query: 69 NVDAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126
DA+ L+ ++ S P G + I + NP+ Y
Sbjct: 243 --DAQNRLIAQFPATMGSQHDPL-----------PIGTWEIKGLSRNPDFHYN------- 282
Query: 127 PNEF-------DKAHNRTG-----ADLMI---------HGECA--------SAGCYAMNN 157
P+ F +KA + G + I HG S GC + N
Sbjct: 283 PDLFWDASSTDEKAVLKPGPNGPVGVVWIDLSKPHYGIHGTPEPQTIGRTESHGCIRLTN 342
Query: 158 KQMQEIYAIVRDSLRGNMQS 177
+ +V+ ++ Q
Sbjct: 343 WDAARLAQMVQSGVKAVFQP 362
>gi|332828623|gb|EGK01323.1| hypothetical protein HMPREF9455_02515 [Dysgonomonas gadei ATCC
BAA-286]
Length = 352
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 17/113 (15%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHP--LSENLIISMQKKRTSPFHPTVIRIFK 58
M + +L ++ F C ID + P L + Q T P +
Sbjct: 1 MKKTFFLLFASVAFF--ACSSDEQTIDNGQDPEGLVFEIAAKTQLSTTKAGTPVYSQ-DA 57
Query: 59 NENILEIWK---RNVDAEYVLLKEYKICAWSG---------TFGPKIETGDEQ 99
++++ + ++ +Y+ +K Y I W+ G K++ GD +
Sbjct: 58 SQSVTRVSVHAFKSNGTDYLYVKTYDISDWTAGSTFKRYAVPIGDKLDAGDYK 110
>gi|148378889|ref|YP_001253430.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933529|ref|YP_001383270.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
ATCC 19397]
gi|153934554|ref|YP_001386819.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
Hall]
gi|148288373|emb|CAL82450.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152929573|gb|ABS35073.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
ATCC 19397]
gi|152930468|gb|ABS35967.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
Hall]
gi|322805217|emb|CBZ02781.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065]
Length = 125
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ + YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYRTYKVAVGK-PSTP--------TPKGNFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ +V
Sbjct: 80 ------GDYGIHGTNNPSSIGKSVSNGCIRMFNNQVIELSNLVPIG 119
>gi|255318424|ref|ZP_05359657.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
gi|262378654|ref|ZP_06071811.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255304416|gb|EET83600.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
gi|262299939|gb|EEY87851.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 418
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 50/178 (28%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+ L KA + II + P +I K L ++ ++ ++ +
Sbjct: 256 KKLNPKATFKKAGEKIIVANVRNDLPEDIHLIVAHKGAKQLYLF----NSRNQMIASFPA 311
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPNEF 130
S D +P G Y + NP Y LS+ G PN
Sbjct: 312 TIGST---------DTPSPAGTYKVTGVAPNPWYSYSPSNFVQGNNKKPLSLPPG-PN-- 359
Query: 131 DKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
++ I HG S GC + N ++ VR +
Sbjct: 360 -----GPVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGKKVRSGV 412
>gi|302879426|ref|YP_003847990.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
gi|302582215|gb|ADL56226.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
ES-2]
Length = 159
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 43/157 (27%), Gaps = 47/157 (29%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW---- 109
I I+ LE+ +L+ Y + + G +G P G + I
Sbjct: 3 ISIYIKTQQLEL----RGDAEQVLRRYPVS--TALKGAGELSGSYCTPRGRHIIRAKIGT 56
Query: 110 ---------NNLNPNSKYFLSINIGFPNEFD-------------KAHNRTGA------DL 141
Y ++ +P D NR G +
Sbjct: 57 DCPENAVFVRRRPTGEIYSEALGAQYP-LRDWILTRILWLSGCEAGFNRLGKNDTMRRYI 115
Query: 142 MIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
IHG S GC M N + E+Y +V
Sbjct: 116 YIHGTPDTEPMGEARSHGCIRMRNADLVELYDLVPAG 152
>gi|153941218|ref|YP_001390250.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
Langeland]
gi|152937114|gb|ABS42612.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
Langeland]
gi|295318345|gb|ADF98722.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
230613]
Length = 125
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 32/106 (30%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDK 132
+ K YK+ P P+G + I +NP + +L +NI +
Sbjct: 35 VYKTYKVAVGK-PSTP--------TPKGTFKIINRAINPGGPFGARWLGLNIPY------ 79
Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
D IHG S GC M N Q+ E+ IV
Sbjct: 80 ------GDYGIHGTNNPSSIGKSVSNGCIRMFNNQVIELSNIVPIG 119
>gi|251794953|ref|YP_003009684.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
gi|247542579|gb|ACS99597.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
Length = 341
Score = 41.0 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 41/178 (23%)
Query: 18 GCHHSRSLIDKAEH---PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
G + S+I + P + + + T + I + +++ ++
Sbjct: 177 GVGTAASMIQAGQELQIPNPYYMAAAKSGNTVAATTSTKLSIDIDITKNKLYVKSGG--- 233
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP----------------NSKY 118
+ K + I + K P G + I NP S++
Sbjct: 234 TVKKTFDIASGK-----KA----GLTPTGTFEILTKIENPWYSAKGIPGGDPKNPLGSRW 284
Query: 119 FLSINIGFPNEFDKAHNRTG----ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172
+ I PN + G + + G ASAGC M N+ ++ +Y V +
Sbjct: 285 ---LGISVPNTQGTKYGIHGTNAPSSI---GTNASAGCIRMLNEDVEWLYNAVPTGTK 336
>gi|121606471|ref|YP_983800.1| ErfK/YbiS/YcfS/YnhG family protein [Polaromonas naphthalenivorans
CJ2]
gi|120595440|gb|ABM38879.1| ErfK/YbiS/YcfS/YnhG family protein [Polaromonas naphthalenivorans
CJ2]
Length = 344
Score = 41.0 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 61/180 (33%)
Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG----TFG- 90
+I+ +P IRI K+E++L + + + + I G
Sbjct: 194 KIIVPAPGSDKAPAGAASIRIDKSEHVLYLLDKAE----RPVAAFPISMGGASDPLPIGR 249
Query: 91 ---------------PKIETGDEQA------------PEGFYYIGWNNLNPNSKYFLSIN 123
P + G ++ P G Y++G SK I+
Sbjct: 250 MEIKNAAKDPVFTFNPALLKGTKKTDTKAIIPAGPNNPVGVYWLGL------SKAHWGIH 303
Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183
G P R G+ S GC + N + + +V+ + + A
Sbjct: 304 -GTPEPE-----RVGSS-------ESNGCIHLTNWDVLRVAQVVKPGF------AVDVHA 344
>gi|326386917|ref|ZP_08208531.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
gi|326208597|gb|EGD59400.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370]
Length = 243
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 28/126 (22%)
Query: 51 PTVIRIFKNENILEIWKRNVD-AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P VI + +L +++ + +LK Y GD+ P G + I
Sbjct: 113 PLVITVDLAARVLSVFENGHEVGATAILKGY---------------GDKPTPIGVFPITQ 157
Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA-----SAGCYAMNNKQMQEIY 164
+ + S + + P + G + IHG + GC + + ++++
Sbjct: 158 KDAHHVSNLYDA-----PMPWMMRLTNDG--VSIHGSKVERGYATNGCIGVPDAFAEKLF 210
Query: 165 AIVRDS 170
+ +
Sbjct: 211 RLAKVG 216
>gi|323357749|ref|YP_004224145.1| hypothetical protein MTES_1301 [Microbacterium testaceum StLB037]
gi|323274120|dbj|BAJ74265.1| uncharacterized protein conserved in bacteria [Microbacterium
testaceum StLB037]
Length = 252
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 24/102 (23%)
Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEF-DKAH 134
+K Y I +G P P G +++ N+ Y + + F D
Sbjct: 152 VKTYPIATGTGGT-P--------TPHGSFFLTELIEPTNAGYGPYAFGLS---AFSDVLT 199
Query: 135 NRTGA--DLMIHGEC--------ASAGCYAMNNKQMQEIYAI 166
+ G + +HG S GC M+N + E+ +
Sbjct: 200 SFGGGPGQIGLHGTDDESTIGQSVSHGCIRMSNADITELARL 241
>gi|294497318|ref|YP_003561018.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
gi|294347255|gb|ADE67584.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
Length = 256
Score = 41.0 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 38/139 (27%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ---APEGFYYIGW 109
+I I K+ N L + R L++ +K+ Q PEG + I
Sbjct: 31 LIIINKSTNTLAFYDRG-----KLVRTFKVATG------------RQMSYTPEGTFSIV- 72
Query: 110 NNLNPNSKYFL-SINIGFP-NEF-DK-----AHNRTGADLMIHGECA--------SAGCY 153
N N Y+ +I G P N D+ A G IHG S+GC
Sbjct: 73 -NKIKNRPYYKDNIRGGDPRNPLGDRWLGLNARGTYGTTYAIHGNNNPSSIGTYASSGCI 131
Query: 154 AMNNKQMQEIYAIVRDSLR 172
M +++++ ++ V+ +
Sbjct: 132 RMYDEEVRWLFDRVQTGTK 150
>gi|291085508|ref|ZP_06571091.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
youngae ATCC 29220]
gi|291071175|gb|EFE09284.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
youngae ATCC 29220]
Length = 323
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 39/186 (20%)
Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
FL + + P S I +P VI + E L ++ ++
Sbjct: 69 FLALLQANPGVDPYVPRPGSVLTIPLQTLLPDAPREGIVINL--AELRLYYYQPGTNS-- 124
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP 127
+ Y I G G GD P + NP + + I P
Sbjct: 125 --VTVYPI--GIGQLG-----GDTLTPTMVTTVSDKRANPTWTPTANIRARYKANGIDLP 175
Query: 128 --------NE---FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168
N G ++HG S+GC + + ++ ++ V+
Sbjct: 176 AVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVK 235
Query: 169 DSLRGN 174
+ N
Sbjct: 236 PGTKVN 241
>gi|197117754|ref|YP_002138181.1| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
bemidjiensis Bem]
gi|197087114|gb|ACH38385.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family
[Geobacter bemidjiensis Bem]
Length = 281
Score = 41.0 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 28/125 (22%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P I + + E L ++ L+ + I G + P G + I
Sbjct: 111 EPKFIMVDQAEMFLGAYEYG-----KLVYSFPIALG--------IQG-KMVPNGTFRIDA 156
Query: 110 NNLNPNSKYFLSINIG--FPNEF------DKAHNRTGADLMIHGE-----CASAGCYAMN 156
+ S + IG +P + DK+ IHG AS GC +
Sbjct: 157 ADRRHQSNLYQVEEIGRPYPMHYGLRFWVDKSKEDWPTY-WIHGRDLPGHPASHGCIGLY 215
Query: 157 NKQMQ 161
+++MQ
Sbjct: 216 DEEMQ 220
>gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16]
gi|81365181|sp|Q5WC42|YKUD_BACSK RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
protein YkuD homolog
gi|56911541|dbj|BAD66068.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 165
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 34/115 (29%)
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN----------SKYFLSIN 123
++K Y I K+ T Q P G + I NP SK I+
Sbjct: 74 GSVVKIYPIAVG------KMLT---QTPTGNFVIVNKAPNPGGPFGTMWMSLSKLHYGIH 124
Query: 124 -IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
P + + G+ S GC M+NK ++E+ A V R ++
Sbjct: 125 GTNDP-----------SSI---GKSVSHGCIRMHNKDVEELAATVPIGTRVRIEP 165
>gi|258514598|ref|YP_003190820.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778303|gb|ACV62197.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 411
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 39/161 (24%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I I K N L ++ N L+K + + PEG + I +N
Sbjct: 30 IIINKQNNKLAFYQNN-----QLVKIFPVATGREPS---------YTPEGSFKIINKIIN 75
Query: 114 PNSKYFLSINI--GFP-----NEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158
P Y++ + I G P N + N G IHG S GC M+N
Sbjct: 76 P---YYIKLKIDGGAPDNPLGNRW-MGLNAGGGTYGIHGNSNPASIGTYASGGCIRMSNN 131
Query: 159 QMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199
+ +Y + + ++I + + + + +
Sbjct: 132 DVIWLYERIPIG------TPVEIINYSMDFDNNLLDGERRD 166
>gi|261420721|ref|YP_003254403.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
gi|319768391|ref|YP_004133892.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
gi|261377178|gb|ACX79921.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
gi|317113257|gb|ADU95749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
Length = 165
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 42/150 (28%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + R ++ Y I
Sbjct: 40 PGQEIVIPHLPPKGSIPYT-IHISI--SRRQLTLKHRGRT-----IRTYPIGVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGAD 140
K+ T P G + I NP SK I+ P +
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAMWLSLSKLHYGIHGTNDP-----------SS 131
Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+ G+ S GC M+NK + E+ +IV +
Sbjct: 132 I---GKYVSKGCIRMHNKDVLELASIVPNG 158
>gi|262379111|ref|ZP_06072267.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262298568|gb|EEY86481.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 169
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 43/136 (31%)
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN--NLNPNSKYFLS---------- 121
L K Y I + G + Q P G++ I +P + F++
Sbjct: 23 PKLKKCYAISSGKNGVG--EQENTGQTPRGWHRIEKKIGAEHPKNSVFIARQFTDEIYSP 80
Query: 122 -INIGFPNEFDKAHNR--------TG-----------ADLMIHGECASA--------GCY 153
+ FP + D R G + IHG + GC
Sbjct: 81 ELAAQFP-QRDWILTRILWLHGLEPGFNQGEGRDTFQRYIYIHGTPDTEPMGIPMSHGCI 139
Query: 154 AMNNKQMQEIYAIVRD 169
M N+++ E++ +V +
Sbjct: 140 RMRNEEIIELFDLVPE 155
>gi|319409422|emb|CBI83068.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 169
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 50/131 (38%)
Query: 83 CAWSGTFGPKIETGDEQAP-----------EGFYYIGWNNLNP---------------NS 116
G P GD P + FY ++ P ++
Sbjct: 25 ALGRGGISPYKREGDGATPLANMRCLGGFRDNFYRPFPRSVLPFHRIRAQDGWCDASGDA 84
Query: 117 KYFLSINIGFPNEFDKAHNRT--------------------GADLMIH----GECASAGC 152
Y +++ +P +K H G+ + +H + GC
Sbjct: 85 NYNRLVHLPYPKSAEKMHREDGLYAIGLILDWNSTQRKMERGSAIFMHLARDNYAPTEGC 144
Query: 153 YAMNNKQMQEI 163
A++ + M+ +
Sbjct: 145 IALSRRDMERL 155
>gi|126649562|ref|ZP_01721803.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905]
gi|126593887|gb|EAZ87810.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905]
Length = 143
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 39/131 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I I L +++ N+ L K+Y I G + P G + I
Sbjct: 34 PYRIEISTENRWLRLYRNNI-----LQKQYPIA-----VGRMLHE----TPVGSFIIINK 79
Query: 111 NLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ 159
+ NP SK I+ P + + G S GC M N+
Sbjct: 80 DPNPGGPFGTMWMSLSKEHYGIHGTNDP-----------SSI---GHAVSHGCIRMQNQD 125
Query: 160 MQEIYAIVRDS 170
++E+ +IV
Sbjct: 126 VEELASIVPIG 136
>gi|126658355|ref|ZP_01729504.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
gi|126620287|gb|EAZ91007.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
Length = 191
Score = 40.6 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 53/183 (28%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
+ S PL E I++ ++ + V+ + E + +++ + ++
Sbjct: 36 PATPSTELPVTLPLEEAAIVTPEETIETLATRVVLNL--KERKVYVYQ-----DDQVIAN 88
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNP----------NSKYFLSIN- 123
Y + + P G + + NP NS +
Sbjct: 89 YPVAIGKPG---------WETPRGEFSVIQMVEDPQWKNPWNGRVSAAGPNSP----LGE 135
Query: 124 --IGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRG 173
IGF G + HG S GC M N+ ++ +Y +V+ +
Sbjct: 136 RWIGF-------WREGGKYIGFHGTPGEHVMGQAVSHGCVRMRNQDVKALYELVQTGIPV 188
Query: 174 NMQ 176
+Q
Sbjct: 189 IVQ 191
>gi|297192513|ref|ZP_06909911.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197718056|gb|EDY61964.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 266
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 34/95 (35%)
Query: 109 WNNLNPNSKYFLSIN--------------------IGFPNEFDKAH-----------NRT 137
W +P SK++ S++ I +P ++ KA R
Sbjct: 165 WWVQDPESKFYNSMHTEAGADFPLTESGDRGSEHLINYPTQYAKALVINFNRWPATPGR- 223
Query: 138 GADLMIH--GECASAGCYAMNNKQMQEIYAIVRDS 170
GA + +H G A+AGC ++ M++ V+ S
Sbjct: 224 GAGIFLHVNGSGATAGCVSVPRATMEQFMGWVKPS 258
>gi|296133960|ref|YP_003641207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
gi|296032538|gb|ADG83306.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
Length = 291
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 33/111 (29%)
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NEF 130
+ K + + D PEG + + +NP Y+ + I G P N
Sbjct: 54 GQVSKIFPVATGRTP--------DL-TPEGSFRVVRKVVNP---YYNKLKIPGGSPRNPL 101
Query: 131 -------DKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAI 166
D A +G IHG S GC M N+ + I+
Sbjct: 102 GARWLGID-ARGTSGGTYGIHGTNNPKSIGKYASGGCIRMFNQDV--IWLY 149
>gi|262375967|ref|ZP_06069198.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309061|gb|EEY90193.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 410
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 50/181 (27%)
Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79
+ + L A ++ + P +I K L ++ +++ ++
Sbjct: 245 NFLKKLNPNANFNKVGEKLLVSNVRNDLPEGIHLIVAHKGAKQLYLF----NSKNQMIAS 300
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFP 127
+ S D +P G Y + NP Y LS+ G P
Sbjct: 301 FPATIGSA---------DTPSPTGTYKVTGVAPNPWYSYSPSNFVQGKNLKPLSLPPG-P 350
Query: 128 NEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDS 170
N ++ I HG S GC + N ++ V+
Sbjct: 351 N-------GPVGNIWIGLSKKSFGIHGTPNPSSISKTASHGCIRLTNWDANDLGRKVKSG 403
Query: 171 L 171
+
Sbjct: 404 V 404
>gi|154686655|ref|YP_001421816.1| YqjB [Bacillus amyloliquefaciens FZB42]
gi|154352506|gb|ABS74585.1| YqjB [Bacillus amyloliquefaciens FZB42]
Length = 176
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 22/94 (23%)
Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLMIHGE 146
D+ PEG + + +NP Y+ N+ G P N FD A G IHG
Sbjct: 58 DDLTPEGEFTVTVKAVNP---YYRKKNVEGGAPENPLGVRWIGFD-AKGTDGRIYGIHGT 113
Query: 147 C--------ASAGCYAMNNKQMQEIYAIVRDSLR 172
S GC M N+ + I+ I+ +
Sbjct: 114 NREELIGGFVSNGCIRMKNRDVIRIFRIIPPGTK 147
>gi|172037339|ref|YP_001803840.1| hypothetical protein cce_2426 [Cyanothece sp. ATCC 51142]
gi|171698793|gb|ACB51774.1| unknown [Cyanothece sp. ATCC 51142]
Length = 198
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 61/224 (27%), Gaps = 74/224 (33%)
Query: 1 MTNRYNILLFALFIFLNGC---------------HHSRSLIDKAEHPLSENLIISMQKKR 45
MT L F++G + S E P + + +++
Sbjct: 1 MTTMKFTLSLLTLTFISGSILLPIEGINKQAIASEGTPSATPSTELPATSTVTPPVEEAA 60
Query: 46 TSPFHPTVIRIFK-------NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
P P + E + ++ + ++ Y +
Sbjct: 61 I-PTPPETTQTLATHLVLNLKERRVYAYQ-----DDQVIANYPVAIGKPG---------W 105
Query: 99 QAPEGFYYI-----GWNNLNP----------NSKYFLSIN---IGFPNEFDKAHNRTGAD 140
+ P G + + NP NS + IGF G
Sbjct: 106 ETPRGDFSVIQMVEDPQWKNPWNGRVSAAGPNSP----LGERWIGF-------WREGGKY 154
Query: 141 LMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ HG S GC M N+ ++ +Y +V+ + +Q
Sbjct: 155 IGFHGTPGEHVMGQAVSHGCVRMRNRDVKALYELVQTGIPVIVQ 198
>gi|237731095|ref|ZP_04561576.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906634|gb|EEH92552.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 323
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 52/186 (27%), Gaps = 39/186 (20%)
Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74
FL + + P S I +P VI + E L ++ ++
Sbjct: 69 FLALLQANPGVDPYVPRPGSVLTIPLQTLLPDAPREGIVINL--AELRLYYYQPGTNS-- 124
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP 127
+ Y I G G GD P I NP + + I P
Sbjct: 125 --VTVYPI--GIGQLG-----GDTLTPTMVTTISDKRANPTWTPTANIRARYKANGIDLP 175
Query: 128 --------NE---FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168
N G ++HG S+GC + + ++ ++ V
Sbjct: 176 AVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVT 235
Query: 169 DSLRGN 174
+ N
Sbjct: 236 PGTKVN 241
>gi|150390862|ref|YP_001320911.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
gi|149950724|gb|ABR49252.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
QYMF]
Length = 332
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 32/140 (22%)
Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104
P + I K + IL +++ + ++K+Y + PEG
Sbjct: 109 DQPPTKGKWMTINKTKRILTLYEGD-----KVMKKYPVAQGKEP---------GLTPEGK 154
Query: 105 YYIGWNNLNP-----------------NSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC 147
+ I +NP N + + I + G
Sbjct: 155 FTIVNKLVNPGWGGAGIAQPVKGGSPNNPLGYRWMGINH-GGGGSYGIHGNNNPRSIGTN 213
Query: 148 ASAGCYAMNNKQMQEIYAIV 167
AS GC M N + E++ I+
Sbjct: 214 ASLGCVRMINSDVAELFDII 233
>gi|225389541|ref|ZP_03759265.1| hypothetical protein CLOSTASPAR_03289 [Clostridium asparagiforme
DSM 15981]
gi|225044405|gb|EEG54651.1| hypothetical protein CLOSTASPAR_03289 [Clostridium asparagiforme
DSM 15981]
Length = 256
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 66 WKRNVDAEYVL-LKEYKICAWSGTFGPKIETGDEQAPEGFYY 106
++++ + + L KE I G + GD + PEG Y
Sbjct: 88 YRKDENGAWQLAWKEAGI-VGRGGITDEKREGDGKTPEGTYR 128
>gi|114777595|ref|ZP_01452576.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1]
gi|114552066|gb|EAU54583.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1]
Length = 154
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Query: 140 DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
+ IHG AS GC M N + E++A VR + R N++
Sbjct: 109 YIYIHGTHAEALAGTPASHGCIRMRNADIIELFAHVRINERVNIRP 154
>gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099]
gi|14023713|dbj|BAB50318.1| mll3427 [Mesorhizobium loti MAFF303099]
Length = 505
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 52/168 (30%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
II + P RI ++ E++ + L+ Y S
Sbjct: 343 PGTIIKVANFGKLVSTPVA-RIVADKTKKEVYAYDASG--KLVAAYPATIGSA------- 392
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN--------EFDK 132
D +P G + + L+PN Y + NI F PN DK
Sbjct: 393 --DTPSPTGIHAVSRIALDPN--YTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIALDK 448
Query: 133 -AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
+ IHG S GC + N +E+ +V +
Sbjct: 449 PTYG-------IHGTPEPSKIGKTESHGCVRLTNWDARELAKLVSPGV 489
>gi|119897880|ref|YP_933093.1| hypothetical protein azo1589 [Azoarcus sp. BH72]
gi|119670293|emb|CAL94206.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 159
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 45/163 (27%), Gaps = 59/163 (36%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
IRI L ++ + ++ Y + + GP G P G + I
Sbjct: 3 IRIDLGSQTLALF----GDDGACIRRYPVSTAAN--GPGEREGSGCTPRGRHRIRAAIG- 55
Query: 114 PNSKYFLSINIGF-------------PNEFDKAHNR--------------TGA------- 139
++ IG P A R G
Sbjct: 56 ------RAMPIGTVFRGRRPTGEIWTPALAAAAPGRDWILSRILWLCGEEPGRNRLGEVD 109
Query: 140 ----DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDS 170
+ IHG S GC M N+++ E++ +VR
Sbjct: 110 TMRRYVYIHGTGDDQPMGTPRSHGCIRMRNREVVELFDLVRPG 152
>gi|302848221|ref|XP_002955643.1| hypothetical protein VOLCADRAFT_66117 [Volvox carteri f.
nagariensis]
gi|300259052|gb|EFJ43283.1| hypothetical protein VOLCADRAFT_66117 [Volvox carteri f.
nagariensis]
Length = 767
Score = 40.2 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFLSINIGFPNEFDKAHNRTG 138
G P+I+ D PEG Y + NS + + + N D++ TG
Sbjct: 655 GGGVYPEIKEPDYLTPEGDYRVDARGTKTMLNSLMYK---LSYYNFADESQLSTG 706
>gi|288555862|ref|YP_003427797.1| hypothetical protein BpOF4_14280 [Bacillus pseudofirmus OF4]
gi|288547022|gb|ADC50905.1| Uncharacterized erfK/srfK family protein, probably secreted
[Bacillus pseudofirmus OF4]
Length = 164
Score = 40.2 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 31/110 (28%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NE 129
+ + + Y++ + + G + PEG + + NP Y+ ++I G P N
Sbjct: 39 DGQVQRVYRVASG--------KEG-AETPEGEFTVVVKAENP---YYRKLDIKGGDPHNP 86
Query: 130 -------FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIY 164
FD A G IHG +AGC + N+++++++
Sbjct: 87 LGTRWIGFD-AEGTDGRIYGIHGTNRPDSIGSHVTAGCVRLPNEEVEQLF 135
>gi|168211908|ref|ZP_02637533.1| cell wall binding repeat protein [Clostridium perfringens B str.
ATCC 3626]
gi|170710148|gb|EDT22330.1| cell wall binding repeat protein [Clostridium perfringens B str.
ATCC 3626]
Length = 454
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 354 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 413
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 414 ATGGCVSMPREKMIEI 429
>gi|315646099|ref|ZP_07899219.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
gi|315278298|gb|EFU41614.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
Length = 146
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 47/134 (35%), Gaps = 34/134 (25%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I I K+ N L +++ ++K + + PEG + I
Sbjct: 20 FIVIDKSTNKLTYYEKG-----KVIKTFPVATGKKPS---------YTPEGLFKIHEKVK 65
Query: 113 NPNSKYFL-SINIGFP-NEF-DK-------AHNRTGADLMIHGECAS--------AGCYA 154
N Y+ I G P N D+ + R IHG S AGC
Sbjct: 66 NR--PYYKEGIKGGDPRNPLGDRWLGINVKVNGRISYAYAIHGNNNSNSIGKYVSAGCIR 123
Query: 155 MNNKQMQEIYAIVR 168
M+NK ++ +Y V+
Sbjct: 124 MHNKDVRWLYDKVK 137
>gi|82702355|ref|YP_411921.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
gi|82410420|gb|ABB74529.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
Length = 159
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 36/136 (26%), Gaps = 43/136 (31%)
Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN-------------NLNPNSKYFLS 121
+++ Y+I + G E G P G + I Y
Sbjct: 19 AVVRRYRISSAKNGVG--QENGSFCTPLGRHIIRAKIGTDQPVNTVFVKRRPTGEIYTPE 76
Query: 122 INIGFPNEFDKAHNR--------TG-----------ADLMIHGECAS--------AGCYA 154
FP D R G + IHG S GC
Sbjct: 77 FAANFP-RRDWILTRILWLSGCEPGFNRLGKVDTMRRYIYIHGTPDSVEMGKPGSIGCIR 135
Query: 155 MNNKQMQEIYAIVRDS 170
M N+ + E++ +V
Sbjct: 136 MRNQDLLELFDLVEAG 151
>gi|138896847|ref|YP_001127300.1| hypothetical protein GTNG_3210 [Geobacillus thermodenitrificans
NG80-2]
gi|196250423|ref|ZP_03149115.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
gi|134268360|gb|ABO68555.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210082|gb|EDY04849.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
Length = 165
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 44/151 (29%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + R ++ Y +
Sbjct: 40 PGQEIIIPHLPAKGSIPYT-IHISI--SRRQLILKDRGRT-----IRTYPVGVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC 147
K+ T P G + I NP + +LS+ I + G IHG
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAMWLSLSKIHY-----------G----IHGTN 127
Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M+NK + E+ +IV +
Sbjct: 128 DPSSIGKYVSRGCIRMHNKDVLELASIVPNG 158
>gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426]
gi|56381657|dbj|BAD77565.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 165
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 44/151 (29%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + R ++ Y I
Sbjct: 40 PGQEIVIPHLPPKGSIPYT-IHISI--SRRQLTLKHRGRT-----IRTYPIGVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC 147
K+ T P G + I NP + +LS+ + + G IHG
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAMWLSLSKVHY-----------G----IHGTN 127
Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M+NK + E+ +IV +
Sbjct: 128 DPSSIGKYVSKGCIRMHNKDVLELASIVPNG 158
>gi|18309608|ref|NP_561542.1| hypothetical protein CPE0626 [Clostridium perfringens str. 13]
gi|18144285|dbj|BAB80332.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 454
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 354 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 413
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 414 ATGGCVSMPREKMIEI 429
>gi|110801280|ref|YP_695060.1| cell wall binding repeat-containing protein [Clostridium
perfringens ATCC 13124]
gi|110675927|gb|ABG84914.1| cell wall binding repeat protein [Clostridium perfringens ATCC
13124]
Length = 454
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 354 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 413
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 414 ATGGCVSMPREKMIEI 429
>gi|329929360|ref|ZP_08283108.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
gi|328936447|gb|EGG32892.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
Length = 468
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 27/136 (19%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109
P + I + + L + + +LL+ Y++ + P G ++I
Sbjct: 323 QPLQVIIDRKRHRLAV-----VSGGILLRNYEVGLGGA-----------KTPLGDFHIND 366
Query: 110 NNLNPN----SKY-FLSINIGFPNEFDKAHNRTGA-DLMIHGECASAGCYAMNNKQMQEI 163
+NPN Y + + D + G D+ G S GC M + ++E+
Sbjct: 367 KVVNPNGTTKGPYGTRGMQLS-----DTLYAIHGTLDMDSIGANESEGCIRMLTEDVEEL 421
Query: 164 YAIVRDSLRGNMQSHI 179
+ +V ++ +
Sbjct: 422 FDLVPMGTAVKIREGV 437
>gi|229190228|ref|ZP_04317230.1| hypothetical protein bcere0002_18970 [Bacillus cereus ATCC 10876]
gi|228593212|gb|EEK51029.1| hypothetical protein bcere0002_18970 [Bacillus cereus ATCC 10876]
Length = 266
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 57/186 (30%), Gaps = 33/186 (17%)
Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61
R I+L + L+GC + ID P + L KK S + K
Sbjct: 6 KARMMIVLLIVSSLLSGCSFGETKIDY--KPFVKALDEGDMKKVMSASDDGYAYV-KQRG 62
Query: 62 ILEIWKRNVDAEYVLLKE-YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120
I +++ D E+ K Y+ K G E + N Y
Sbjct: 63 IYSTYEQKEDGEHS--KTIYQTSKGIYNTKDKSLYG-NTTQEITSEVDNKNYKEEVNY-- 117
Query: 121 SINIGFPNEF-----------------DKAHN------RTGADLMIHGECASAGCYAMNN 157
S NI + N D+ + G D+ G+ ++ G Y +
Sbjct: 118 STNISYENGQVQSTDSSLDVSYVNLIVDRLKGIGKLKMKPGGDIKKFGQPSTVG-YTLTE 176
Query: 158 KQMQEI 163
+ Q I
Sbjct: 177 SEFQNI 182
>gi|329928325|ref|ZP_08282196.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
gi|328937882|gb|EGG34287.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
Length = 223
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 40/143 (27%)
Query: 46 TSPFHPTV-------IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98
T+P P + I I+ + L + ++K Y + P
Sbjct: 22 TTPVLPIIHDQSNLEIAIYPERHKLLV-----REHGQIIKTYSVAVG-NPSTP------- 68
Query: 99 QAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------S 149
P G + + + N + I + P G IHG S
Sbjct: 69 -TPVGDFRVKYKGTNWGPSFGPRWIGLNVP------WGNFG----IHGTNKPYSIGQHLS 117
Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172
GC M+NK + E+Y ++ +
Sbjct: 118 HGCIRMHNKDVIELYELIPIGTK 140
>gi|224541355|ref|ZP_03681894.1| hypothetical protein CATMIT_00515 [Catenibacterium mitsuokai DSM
15897]
gi|224525689|gb|EEF94794.1| hypothetical protein CATMIT_00515 [Catenibacterium mitsuokai DSM
15897]
Length = 94
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 15/76 (19%)
Query: 115 NSKYFLSINIGFPNEFDKAHN---------RTGADLMIHGEC--ASAGCYAMNNKQMQEI 163
+S L I +P + A G+ + +H A+AGC ++++ M I
Sbjct: 18 SSAEHL---ISYPTAYRYAIALNYNTACTPGAGSAIFLHCSTGGATAGCISVSSSDMIRI 74
Query: 164 YAIVR-DSLRGNMQSH 178
+++ D+L G Q+
Sbjct: 75 LKMIQGDTLIGIYQNK 90
>gi|169825867|ref|YP_001696025.1| spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41]
gi|168990355|gb|ACA37895.1| Spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41]
Length = 164
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 39/131 (29%)
Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110
P I I L +++ ++ L K+Y I G + P G + I
Sbjct: 55 PYRIEISTENRWLRLYRNSI-----LQKQYPIA-----VGRMLHE----TPVGSFIIINK 100
Query: 111 NLNPN----------SKYFLSIN-IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ 159
+ NP SK I+ P + + G S GC M N
Sbjct: 101 DPNPGGPFGTMWMSLSKEHYGIHGTNDP-----------SSI---GHAVSHGCIRMQNPD 146
Query: 160 MQEIYAIVRDS 170
++E+ +IV
Sbjct: 147 VEELASIVPIG 157
>gi|302523338|ref|ZP_07275680.1| lipoprotein [Streptomyces sp. SPB78]
gi|302432233|gb|EFL04049.1| lipoprotein [Streptomyces sp. SPB78]
Length = 244
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 58/173 (33%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P + ++++ K TV+ K WK++ +W G G
Sbjct: 67 PAASRQVVAVYGKGIDSADSTVVLYTKTGKT---WKKS-------------ASWQGHNGK 110
Query: 92 K-----IETGDEQAPEGFYYI--------GWNNLNP--------------NSKYF---LS 121
K D+++P G Y + P S +
Sbjct: 111 KGWTTAHHENDKRSPVGVYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYV 170
Query: 122 INIGF-------PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163
I I + PN+ + +T G + + HG SA C +++ M+ +
Sbjct: 171 IAIDYNRVKGTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 222
>gi|226314511|ref|YP_002774407.1| hypothetical protein BBR47_49260 [Brevibacillus brevis NBRC 100599]
gi|226097461|dbj|BAH45903.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 237
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 32/124 (25%)
Query: 62 ILEIWKRN----VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117
+E++ R V +K Y + P P G Y + + +
Sbjct: 50 TIEVYPRKHKLIVKKHGKTIKTYPVAVG-NPSTP--------TPVGEYKVIYKGKDWGPS 100
Query: 118 Y-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168
+ + + P G IHG S GC M N + E++ ++
Sbjct: 101 FGPRWLGLNVP------WGIYG----IHGTNKPYSIGQHLSHGCIRMRNNDVIELFKMIP 150
Query: 169 DSLR 172
+
Sbjct: 151 LGTK 154
>gi|241205592|ref|YP_002976688.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859482|gb|ACS57149.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 466
Score = 39.8 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 40/193 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHP---TVIRIFKNENI 62
++ + L H K +P ++ + K +P P V RI ++
Sbjct: 281 SLAYTSTTEMLAERFHMDEAFLKEMNPGADFTVAGTVIKVVNPGEPKSGAVARIIADKGR 340
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+++ D LL Y S D +P G + LNP Y +
Sbjct: 341 KQVFA--YDGAGNLLAAYPASIGST---------DTPSPSGTVTVERVALNPG--YTYNP 387
Query: 123 NIGFPN-EFDK-AHNRTG-----ADLM---------IHGEC--------ASAGCYAMNNK 158
I F DK + G + IHG S GC + N
Sbjct: 388 KINFQQGANDKILNIPPGPNGPVGTVWMALSKPTYGIHGTPEPSKIGRTQSHGCIRLTNW 447
Query: 159 QMQEIYAIVRDSL 171
E+ +V+ +
Sbjct: 448 DATELAKMVKPGV 460
>gi|154483441|ref|ZP_02025889.1| hypothetical protein EUBVEN_01144 [Eubacterium ventriosum ATCC
27560]
gi|149735693|gb|EDM51579.1| hypothetical protein EUBVEN_01144 [Eubacterium ventriosum ATCC
27560]
Length = 370
Score = 39.8 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 49/191 (25%)
Query: 5 YNILLFALFIFLNGCHH---------SRSLIDKAEHPLSENLIIS-MQKKRTSPFHPTVI 54
ILL + IF GC + S A+ + E I++ + HP I
Sbjct: 14 AGILLLNIAIFTVGCSSKSVDSKETTTNSETTVAQTTVPETTIVNYKKLINFKAEHPFYI 73
Query: 55 RIFKNENILEIWKRNVDAEYVL-LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
++ K EN ++ + +Y + K + D P G + +
Sbjct: 74 KVNKKENFAIVYGIDKKGKYSVPYKAFVCSTG--------REDDF-TPNGTFTVSE---- 120
Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIH--------------------GECASAGCY 153
KY + + N + + R +M+H G AS GC
Sbjct: 121 ---KYRWRLMVD--NTYAQYAVRIQGQIMLHSVPYTSPESDALEYWEYNKLGNVASLGCV 175
Query: 154 AMNNKQMQEIY 164
++ IY
Sbjct: 176 RFQVADIKWIY 186
>gi|262371780|ref|ZP_06065059.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
gi|262311805|gb|EEY92890.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
Length = 167
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 140 DLMIHGECASA--------GCYAMNNKQMQEIYAIVRD 169
+ IHG S GC M N ++ E++ +V +
Sbjct: 117 YIYIHGTPESQPMGIPMSHGCIRMQNDEILELFELVPE 154
>gi|333022840|ref|ZP_08450904.1| putative lipoprotein [Streptomyces sp. Tu6071]
gi|332742692|gb|EGJ73133.1| putative lipoprotein [Streptomyces sp. Tu6071]
Length = 237
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 58/173 (33%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P + ++++ K TV+ K WK++ +W G G
Sbjct: 60 PAASRQVVAVYGKGVDSADSTVVLYTKTGKT---WKKS-------------ASWQGHNGK 103
Query: 92 K-----IETGDEQAPEGFYYI--------GWNNLNP--------------NSKYF---LS 121
K D+++P G Y + P S +
Sbjct: 104 KGWTTAHHENDKRSPVGVYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYV 163
Query: 122 INIGF-------PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163
I I + PN+ + +T G + + HG SA C +++ M+ +
Sbjct: 164 IAIDYNRVKGTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 215
>gi|169342359|ref|ZP_02863426.1| cell wall binding repeat protein [Clostridium perfringens C str.
JGS1495]
gi|169299584|gb|EDS81647.1| cell wall binding repeat protein [Clostridium perfringens C str.
JGS1495]
Length = 454
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 354 WDLNSDNSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 413
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 414 ATGGCVSMPREKMIEI 429
>gi|325269986|ref|ZP_08136595.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
[Prevotella multiformis DSM 16608]
gi|324987709|gb|EGC19683.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
[Prevotella multiformis DSM 16608]
Length = 403
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 50 HPTVIRIFKNENIL---EIWKRNVDAEYVLLK---EYKICAWSGTFGPKIETGDEQAPEG 103
P IR FK +L ++ NV +K +Y I W G FGPK D +
Sbjct: 89 KPVKIRSFKGMRVLAGSKVIVNNVKNPLPFIKKKGQYYIQTWHGPFGPKYAENDAKEHLS 148
Query: 104 FYYIGWNN 111
YYI +
Sbjct: 149 AYYIKHSQ 156
>gi|312876406|ref|ZP_07736390.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796764|gb|EFR13109.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 190
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 48/192 (25%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92
+ I+ + +P+ +I + +++ L ++K E +L K Y I P
Sbjct: 18 IPLKAILGISNYNKNPY---LIYVSIDDSRLYVFK-----EGILYKSYPISPGK-PSTP- 67
Query: 93 IETGDEQAPEGFYYI---GWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-------ADLM 142
P G + I + ++ + + + + G + +
Sbjct: 68 -------TPVGTFKIISKDYWGEGFGGRW---MGLN------VRYGKYGIHGTIYESYIG 111
Query: 143 IHGECASAGCYAMNNKQMQEIYAI--------VRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194
H S GC M NK ++E+++ V + L G ++ + +P M
Sbjct: 112 AH---VSKGCVRMLNKDVKELFSYIPIGTTVIVSEGLYGEFRNGFR-TIYPGDTGEDVMA 167
Query: 195 LYQNNPNYSFWN 206
+ + F++
Sbjct: 168 VQRRLQELGFYS 179
>gi|239828519|ref|YP_002951143.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
gi|239808812|gb|ACS25877.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
Length = 165
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 44/151 (29%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P E +I + K + P+ I I + L + R ++ Y I
Sbjct: 40 PGQEIVIPHLPPKGSIPYT-IHISI--SRRQLTLKHRGRT-----IRTYPIGVG------ 85
Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC 147
K+ T P G + I NP + +LS+ + + G IHG
Sbjct: 86 KMVTA---TPVGDFVIVNRQPNPGGPFGAMWLSLSKVHY-----------G----IHGTN 127
Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M+NK + E +IV +
Sbjct: 128 DPSSIGKYVSKGCIRMHNKDVLEFASIVPNG 158
>gi|113952862|ref|YP_731601.1| tonB-dependent receptor protein [Synechococcus sp. CC9311]
gi|113880213|gb|ABI45171.1| tonB-dependent receptor protein [Synechococcus sp. CC9311]
Length = 162
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 42/143 (29%), Gaps = 45/143 (31%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE-----GFYYIG 108
I I + +W ++ ++K Y I APE G Y I
Sbjct: 33 IEIEVSLKERYLWLKDAG---TVVKRYPIAIG--------------APESPTIPGVYSIL 75
Query: 109 WNNLNP---NSKYFLSINIGFPN--------EFDKAHNRTGADLMIHGECA--------- 148
+P + + G PN + K+ G +HG
Sbjct: 76 KKVKDPTYYSKSHHKVFPAG-PNDPVGVRFMPYLKSAAD-GKVYAVHGTAWPRWVHLRAA 133
Query: 149 -SAGCYAMNNKQMQEIYAIVRDS 170
S GC M N + E++ V
Sbjct: 134 ASLGCIRMLNSDVIEVFNQVEVG 156
>gi|169831666|ref|YP_001717648.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638510|gb|ACA60016.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 307
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 59/181 (32%)
Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83
S K PL P I I + L + + K++
Sbjct: 107 STPVKTSEPLPP------------PTGEVEIIIDVQKRTLTVMENGYP-----YKQFPCA 149
Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTGAD 140
P P G + I N + + +L +NI +
Sbjct: 150 VGKNET-P--------TPVGNWSIRRKARNWGTGFGTRWLGLNIDW-------------G 187
Query: 141 LM-IHGECA--------SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191
+ IHG S GC M N+ ++E++ V + M +
Sbjct: 188 IYGIHGTNKPYSIGTRASHGCIRMFNRHVEELFPWVEAGT--------PVHIVGNIMGPE 239
Query: 192 N 192
+
Sbjct: 240 H 240
>gi|295399077|ref|ZP_06809059.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110319|ref|YP_003988635.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
gi|294978543|gb|EFG54139.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215420|gb|ADP74024.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
Length = 167
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 34/110 (30%), Gaps = 29/110 (26%)
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NEFDK---- 132
Y + T PEG + + NP Y+ NI G P N
Sbjct: 50 YPVATGVNTL---------LTPEGMFTVTVKAKNP---YYRKKNIPGGAPDNPLGTRWIG 97
Query: 133 --AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
A G IHG S GC M N ++++Y V +
Sbjct: 98 FNAKGTDGRVYGIHGTNNPPSIGKYVSQGCVRMYNHDVEQLYEKVPIGTK 147
>gi|283850406|ref|ZP_06367695.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
gi|283574432|gb|EFC22403.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
Length = 273
Score = 39.4 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 61/234 (26%), Gaps = 77/234 (32%)
Query: 1 MTNRYNIL-LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK- 58
M R +L L AL +F+ C + S S + + V F
Sbjct: 1 MRFRSPVLVLLALTLFVPACQTASSRPRTEPVAASGPATPASPLAGSRQLVLVVAESFND 60
Query: 59 NENILEIWKRNVDAEYVLL-KEYKICAWSGTF-------------GPKIETGDEQAPEGF 104
N+ L ++R D + + + + GP GD ++P G
Sbjct: 61 NQARLRRFERGGDGAWRPVGDDVAVTIGKNGMAWGRGLQGPPPAEGPVKIEGDGRSPAGV 120
Query: 105 Y--------------------------------YIGWNNLN------------------- 113
+ I + N
Sbjct: 121 FAFGTAFAYQPQDLWTTPKMPVHRVTDQTVCVETINSASYNRILDENTAATKDWTSPDRM 180
Query: 114 --PNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQM 160
P+ Y + + + N D G+ + H G + GC AMN +
Sbjct: 181 LRPDGLYRFGLMVDY-NAPDTVPG-AGSCIFFHLWRRPGAP-TVGCTAMNEPAI 231
>gi|118595120|ref|ZP_01552467.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
gi|118440898|gb|EAV47525.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
Length = 160
Score = 39.4 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 14/51 (27%)
Query: 131 DKAHNRTGA------DLMIHGE--------CASAGCYAMNNKQMQEIYAIV 167
D NR G + IHG +S GC M+N+ + E++ +V
Sbjct: 100 DLGRNRLGNVDTMQRYIYIHGTNEEHLLGTPSSHGCIRMSNEDVIELFDLV 150
>gi|325123319|gb|ADY82842.1| hypothetical protein BDGL_002256 [Acinetobacter calcoaceticus
PHEA-2]
Length = 167
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVAEDAL 158
>gi|293611001|ref|ZP_06693300.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826653|gb|EFF85019.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 167
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVAEDAL 158
>gi|260548891|ref|ZP_05823113.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
gi|260408059|gb|EEX01530.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
Length = 167
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDAL 158
>gi|182625740|ref|ZP_02953508.1| cell wall binding repeat protein [Clostridium perfringens D str.
JGS1721]
gi|177909002|gb|EDT71484.1| cell wall binding repeat protein [Clostridium perfringens D str.
JGS1721]
Length = 898
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 798 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 857
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 858 ATGGCVSMPREKMIEI 873
>gi|169632527|ref|YP_001706263.1| hypothetical protein ABSDF0653 [Acinetobacter baumannii SDF]
gi|184159373|ref|YP_001847712.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU]
gi|239501781|ref|ZP_04661091.1| hypothetical protein AbauAB_05656 [Acinetobacter baumannii AB900]
gi|260557219|ref|ZP_05829435.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC
19606]
gi|332876213|ref|ZP_08443988.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
gi|169151319|emb|CAP00030.1| conserved hypothetical protein [Acinetobacter baumannii]
gi|183210967|gb|ACC58365.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU]
gi|193078252|gb|ABO13212.2| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978]
gi|260409325|gb|EEX02627.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC
19606]
gi|322509285|gb|ADX04739.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|323519313|gb|ADX93694.1| hypothetical protein ABTW07_3274 [Acinetobacter baumannii
TCDC-AB0715]
gi|332735485|gb|EGJ66537.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
Length = 167
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDAL 158
>gi|169794854|ref|YP_001712647.1| hypothetical protein ABAYE0680 [Acinetobacter baumannii AYE]
gi|213157819|ref|YP_002320617.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057]
gi|215482401|ref|YP_002324583.1| hypothetical protein ABBFA_000659 [Acinetobacter baumannii
AB307-0294]
gi|301348125|ref|ZP_07228866.1| hypothetical protein AbauAB0_17806 [Acinetobacter baumannii AB056]
gi|301513350|ref|ZP_07238587.1| hypothetical protein AbauAB05_17256 [Acinetobacter baumannii AB058]
gi|301596943|ref|ZP_07241951.1| hypothetical protein AbauAB059_14032 [Acinetobacter baumannii
AB059]
gi|332852308|ref|ZP_08434113.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
gi|332870531|ref|ZP_08439295.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
gi|169147781|emb|CAM85644.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213056979|gb|ACJ41881.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057]
gi|213986475|gb|ACJ56774.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332729438|gb|EGJ60778.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
gi|332732268|gb|EGJ63536.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
Length = 167
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDAL 158
>gi|168218140|ref|ZP_02643765.1| cell wall binding repeat protein [Clostridium perfringens NCTC
8239]
gi|182379843|gb|EDT77322.1| cell wall binding repeat protein [Clostridium perfringens NCTC
8239]
Length = 898
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 798 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 857
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 858 ATGGCVSMPREKMIEI 873
>gi|168214858|ref|ZP_02640483.1| cell wall binding repeat protein [Clostridium perfringens CPE str.
F4969]
gi|170713693|gb|EDT25875.1| cell wall binding repeat protein [Clostridium perfringens CPE str.
F4969]
Length = 898
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 109 WNNLNPNSKYFLSIN----------IGFPNEF------DKAHNR---TGADLMIH--GEC 147
W+ + NS Y IN I +P ++ D HN+ G + +H G
Sbjct: 798 WDLNSENSTYNRLINYNPGGDYEHLISYPRQYEYSLITDYNHNQVPNKGGAIFVHCLGRG 857
Query: 148 ASAGCYAMNNKQMQEI 163
A+ GC +M ++M EI
Sbjct: 858 ATGGCVSMPREKMIEI 873
>gi|126642830|ref|YP_001085814.1| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978]
Length = 138
Score = 39.4 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSL 171
+ IHG S GC M N+++ E++ +V D+L
Sbjct: 89 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDAL 129
>gi|222055460|ref|YP_002537822.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221564749|gb|ACM20721.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 286
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 30/144 (20%)
Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90
P+ L K P I I E L ++ + L+ I +
Sbjct: 104 APVPAELAYEASDK-----DPKFILIDLTEQFLGVYDKG-----RLVFSSPIASGKS--- 150
Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI---NIGFPNEFDKAH--NRTGADLMIHG 145
D P G + I + S + +I +I +P + N G + IHG
Sbjct: 151 ------DFITPPGEFRIDAYSGRHESSLY-TIEDKDIPYPMHYGLRFLVNEEGVEYWIHG 203
Query: 146 E-----CASAGCYAMNNKQMQEIY 164
AS GC + ++ MQ+ Y
Sbjct: 204 RDMPGYPASHGCVGLYDEDMQKEY 227
>gi|254442802|ref|ZP_05056278.1| ErfK/YbiS/YcfS/YnhG superfamily [Verrucomicrobiae bacterium DG1235]
gi|198257110|gb|EDY81418.1| ErfK/YbiS/YcfS/YnhG superfamily [Verrucomicrobiae bacterium DG1235]
Length = 178
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 12/48 (25%)
Query: 140 DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
+ IHG ASAGC + N +M E++ D+++ Q +I
Sbjct: 134 YIYIHGTNHEEKIGSPASAGCVQLRNAEMIELF----DAVQTGDQVYI 177
>gi|260881076|ref|ZP_05403544.2| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
20544]
gi|260849442|gb|EEX69449.1| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
20544]
Length = 412
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 18/86 (20%)
Query: 100 APEGFYYIGWNNLNP-------NSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC----- 147
P G+Y + +NP S SI G N G + IHG
Sbjct: 108 TPTGYYKVIDKEVNPTWTDPGDASA---SIPSGPSNPLGYRWIGIGGNYGIHGTNRPESI 164
Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M+ + +++IY +V
Sbjct: 165 GHYVSNGCIRMHEEDVEKIYDMVEVG 190
>gi|261405715|ref|YP_003241956.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
gi|261282178|gb|ACX64149.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
Length = 112
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 30/102 (29%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAH 134
+++ + + K+ T Q+P G Y I NP + + + P +
Sbjct: 23 VVRTFPVAIG------KMAT---QSPPGNYTIVNKQPNPGGPFGAYWLGLSKP-----HY 68
Query: 135 NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168
IHG S GC M N+ + E+ ++V
Sbjct: 69 G-------IHGTNDPSSIGRSVSHGCIRMYNEDVVELASLVP 103
>gi|319781350|ref|YP_004140826.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167238|gb|ADV10776.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 501
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 46/165 (27%)
Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94
II + P RI +++ E++ + L+ Y S
Sbjct: 339 PGTIIKVANFGRLVSTPVA-RIVADKDKKEVFAYDAGG--KLVAAYPATIGSS------- 388
Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TG-----ADLMI 143
D +P G + + L+PN Y SIN F + N G + I
Sbjct: 389 --DTPSPSGIHTVSRVALDPNYTYNPSIN------FKQGQNDKVLTIPPGPNGPVGSVWI 440
Query: 144 ---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
HG S GC + N +E+ +V +
Sbjct: 441 ALDKPTYGIHGTPDPSKIGKTESHGCVRLTNWDARELAKLVSPGV 485
>gi|326780422|ref|ZP_08239687.1| putative secreted protein [Streptomyces cf. griseus XylebKG-1]
gi|326660755|gb|EGE45601.1| putative secreted protein [Streptomyces cf. griseus XylebKG-1]
Length = 235
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 117 KYFLSINIGFPNEFDK-AHNRTGADLMIH--GECASAGCYAMNNKQMQEIYA 165
+Y ++ IGF +D+ R GA + +H G A+AGC ++ M EI A
Sbjct: 163 QYARALVIGF--NYDRPVRGR-GAGIFLHVNGRGATAGCVSVPADAMAEILA 211
>gi|169632913|ref|YP_001706649.1| hypothetical protein ABSDF1149 [Acinetobacter baumannii SDF]
gi|169151705|emb|CAP00498.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
Length = 418
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 56/187 (29%)
Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73
FL + + + E + N+ + P +I K L ++ ++
Sbjct: 253 AFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 302
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121
++ + S P +P G Y + NP Y LS
Sbjct: 303 NQMIASFPATIGSTET-P--------SPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 353
Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164
+ G PN ++ I HG S GC + N ++
Sbjct: 354 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTTSHGCIRLTNWDANDLG 405
Query: 165 AIVRDSL 171
VR +
Sbjct: 406 NKVRSGV 412
>gi|114797650|ref|YP_762222.1| hypothetical protein HNE_3551 [Hyphomonas neptunium ATCC 15444]
gi|114737824|gb|ABI75949.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 168
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQEI 163
+ Y L + +G+ N+ D G+ + +H G + GC A+ + ++E+
Sbjct: 104 DDLYNLVVELGY-ND-DPPLAGCGSAIFMHLARPGYLPTEGCIALTDGDLREV 154
>gi|52841812|ref|YP_095611.1| hypothetical protein lpg1582 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628923|gb|AAU27664.1| hypothetical protein lpg1582 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 146
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 43/133 (32%), Gaps = 43/133 (32%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEG---FYYIGWNNLNPNS----------KYF 119
+ L+ Y I + G KI +G P G Y I +L NS Y
Sbjct: 6 KDHLIANYAISSGKNGVGEKINSG--CTPRGWHKIYSILGIDLPINSVMVAREWTGEIYS 63
Query: 120 LSINIGFPNEFDKAHNR------------TGAD-------LMIHGECASA--------GC 152
S+ FP E D R G D + IHG + GC
Sbjct: 64 ESLATQFP-ERDWILTRVLQLDGLEPGRNKGGDVDTLHRYIYIHGTPDTTQLGIPGSHGC 122
Query: 153 YAMNNKQMQEIYA 165
+NN + E+ A
Sbjct: 123 IRLNNDAIIELAA 135
>gi|318056857|ref|ZP_07975580.1| lipoprotein [Streptomyces sp. SA3_actG]
Length = 244
Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 65/224 (29%), Gaps = 70/224 (31%)
Query: 2 TNRYNILLFALFIFLNGCHH-----------SRSLIDKAEHPLSENLIISMQKKRTSPFH 50
T + I A+ L C + S P ++ + R
Sbjct: 7 TVKVLIGTAAVLALLTSCSGQDGGDGVKKDAAASSPAAHRAPEADPTRVPGVGDRLQGQI 66
Query: 51 PTVIR---------IFKNENILEIWKRNVDAEYVLLKEYKICA-WSGTFGPK-----IET 95
P R I ++ + ++ + K +K A W G G K
Sbjct: 67 PAASRQVVAVYGKGIDSADSTVVLYTKTG-------KTWKASASWQGHNGKKGWTTAHHE 119
Query: 96 GDEQAPEGFYYI--------GWNNLNP--------------NSKYF---LSINIGF---- 126
D+++P G Y + P S + I I +
Sbjct: 120 NDKRSPVGVYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYVIAIDYNRVK 179
Query: 127 ---PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163
PN+ + +T G + + HG SA C +++ M+ +
Sbjct: 180 GTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 222
>gi|329922685|ref|ZP_08278237.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
gi|328942027|gb|EGG38310.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
Length = 114
Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 30/102 (29%)
Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAH 134
+++ + + K+ T Q+P G Y I NP + + + P +
Sbjct: 25 VVRTFPVAIG------KMAT---QSPPGNYTIVNKQPNPGGPFGAYWLGLSKP-----HY 70
Query: 135 NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168
IHG S GC M N+ + E+ ++V
Sbjct: 71 G-------IHGTNDPSSIGRSVSHGCIRMYNEDVVELASLVP 105
>gi|262369492|ref|ZP_06062820.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315560|gb|EEY96599.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 416
Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 50/178 (28%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
+ L KA + II + P +I K L ++ ++ ++ +
Sbjct: 254 QKLNPKAIFKKAGEKIIVANIRNEVPEDIHLIVAHKGAKQLYLF----NSRNQMIGSFPA 309
Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPNEF 130
S D +P G Y + NP Y LS+ G PN
Sbjct: 310 TIGSS---------DTPSPTGTYKVTGVAPNPWYSYSPSNFVQGKNLKPLSLPPG-PN-- 357
Query: 131 DKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
++ I HG S GC + N ++ V+ +
Sbjct: 358 -----GPVGNIWIGLSKKSFGIHGTPNPSAISKTASHGCIRLTNWDANDLGKKVKSGV 410
>gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Aromatoleum aromaticum EbN1]
gi|56314551|emb|CAI09196.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 162
Score = 39.0 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 8/39 (20%)
Query: 140 DLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170
+ IHG S GC M N+ + E++ +V
Sbjct: 117 YIYIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVPVG 155
>gi|218673617|ref|ZP_03523286.1| hypothetical protein RetlG_19593 [Rhizobium etli GR56]
Length = 466
Score = 39.0 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 58/193 (30%), Gaps = 40/193 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT---VIRIFKNENI 62
++ + L H K +P ++ + K +P P V RI ++
Sbjct: 281 SLAFTSTTEMLAERFHMDEAFLKEMNPGADFSVPGTVIKVVNPGEPKSGEVARIIADKGR 340
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+++ D L+ Y S D +P G + NP Y +
Sbjct: 341 KQVFA--YDGAGNLIAAYPASIGST---------DTPSPSGTVTVERVAFNPG--YTYNP 387
Query: 123 NIGFPN-EFDK-AHNRTG-----ADLM---------IHGEC--------ASAGCYAMNNK 158
I F DK + G + IHG S GC + N
Sbjct: 388 KINFQQGANDKILNIPPGPNGPVGTVWMALSKPTYGIHGTPEPSKIGRTQSHGCIRLTNW 447
Query: 159 QMQEIYAIVRDSL 171
E+ +V+ +
Sbjct: 448 DATELAKMVKPGV 460
>gi|317132365|ref|YP_004091679.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
YUAN-3]
gi|315470344|gb|ADU26948.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
YUAN-3]
Length = 235
Score = 39.0 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 37/138 (26%)
Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100
M+ TSP +P +I I EN L ++K L + Y D +
Sbjct: 35 MRASATSP-NPYMILIQVQENRLSLFKNG-----KLYRSYSCATGKE---------DTPS 79
Query: 101 PEGFYYIGWNNL--NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG--------ECASA 150
P G + I YFL +N + IHG + +S
Sbjct: 80 PCGTFQINRKARWGEGFGGYFLGLNC------------PWGNYGIHGTTRPDSVGQPSSH 127
Query: 151 GCYAMNNKQMQEIYAIVR 168
GC+ M K ++ +Y++V
Sbjct: 128 GCFRMYGKDIRALYSLVP 145
>gi|163852067|ref|YP_001640110.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
PA1]
gi|163663672|gb|ABY31039.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
PA1]
Length = 248
Score = 39.0 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 128 NEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
N G + IHG S+GC M N+ + ++Y+ V+ R +Q
Sbjct: 190 NPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVTDLYSRVKVGARVVVQR 248
>gi|255320554|ref|ZP_05361734.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
gi|255302404|gb|EET81641.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
Length = 169
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 43/136 (31%)
Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN--NLNPNSKYFLS---------- 121
L K Y I + G + Q P G++ I +P + F++
Sbjct: 23 PKLKKCYAISSGKNGVG--EQENTGQTPRGWHRIEKKIGAEHPKNSVFIARQFTDEIYSP 80
Query: 122 -INIGFPNEFDKAHNR--------TG-----------ADLMIHGECASA--------GCY 153
+ FP + D R G + IHG + GC
Sbjct: 81 ELAAQFP-QRDWILTRILWLHGLEPGFNQGEGRDTFQRYIYIHGTPDTEPMGIPMSHGCI 139
Query: 154 AMNNKQMQEIYAIVRD 169
M N+++ E++ ++ +
Sbjct: 140 RMRNEEIIELFDLIPE 155
>gi|188582015|ref|YP_001925460.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
gi|179345513|gb|ACB80925.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
Length = 224
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 19/142 (13%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDA-EYVLLKEYKICAWSG--TFGPKIETGDEQAPEGF 104
P+ P I + E L + + N +A Y + W G T K E D + P
Sbjct: 90 PYAPGTIVVSTAERRLYLIQPNGEALRYGVGVGRPGFTWGGMQTVTMKREWPDWRPP--- 146
Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAM 155
P+ ++ I N G + IHG S+GC M
Sbjct: 147 --AEMLRRRPDLPRYMKGGIE--NPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRM 202
Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177
N+ + ++Y+ V+ R +Q
Sbjct: 203 TNEDVTDLYSRVKVGARVVVQR 224
>gi|239827637|ref|YP_002950261.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
gi|239807930|gb|ACS24995.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
Length = 167
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 29/110 (26%)
Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI--GFPN-----EFDK 132
Y + PEG + + NP Y+ NI G PN +
Sbjct: 50 YPVATGFNES---------LTPEGLFMVTVKAENP---YYRKQNIPGGAPNNPLGTRWVG 97
Query: 133 AHNR-TGADLM-IHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172
+ R T + IHG S GC M N+ ++++Y + +
Sbjct: 98 FNARGTDGRIYGIHGTNNPSSIGKYVSKGCVRMYNRDVEQLYEKIPIGTK 147
>gi|218530824|ref|YP_002421640.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
gi|254561810|ref|YP_003068905.1| hypothetical protein METDI3404 [Methylobacterium extorquens DM4]
gi|218523127|gb|ACK83712.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
chloromethanicum CM4]
gi|254269088|emb|CAX25051.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
[Methylobacterium extorquens DM4]
Length = 222
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 128 NEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
N G + IHG S+GC M N+ + ++Y+ V+ R +Q
Sbjct: 164 NPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVTDLYSRVKVGARVVVQR 222
>gi|189220475|ref|YP_001941115.1| erfK/srfK family protein [Methylacidiphilum infernorum V4]
gi|189187333|gb|ACD84518.1| Uncharacterized erfK/srfK family protein [Methylacidiphilum
infernorum V4]
Length = 303
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Query: 141 LMIHG--------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178
+ IHG + S GC M N+ + E+Y +V + +Q
Sbjct: 105 IFIHGTNQEGLVGQPVSYGCIRMKNRDVLELYDLVSEYTPVYIQKE 150
>gi|170750298|ref|YP_001756558.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656820|gb|ACB25875.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
JCM 2831]
Length = 221
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 9/59 (15%)
Query: 128 NEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
N G + IHG S+GC M N + ++Y + + +Q
Sbjct: 163 NPLGARAMYLGGSIYRIHGSNEPETIGTAVSSGCIRMTNDDVTDLYTRAKVGTKVIVQR 221
>gi|240139393|ref|YP_002963868.1| hypothetical protein MexAM1_META1p2838 [Methylobacterium extorquens
AM1]
gi|240009365|gb|ACS40591.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
[Methylobacterium extorquens AM1]
Length = 222
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 128 NEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
N G + IHG S+GC M N+ + ++Y+ V+ R +Q
Sbjct: 164 NPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVTDLYSRVKVGARVVVQR 222
>gi|150017149|ref|YP_001309403.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB
8052]
gi|149903614|gb|ABR34447.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB
8052]
Length = 230
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSL 171
G AS GC M NK ++E+Y V+ +
Sbjct: 118 GSEASHGCIRMRNKDIEELYEYVKRGM 144
>gi|223940400|ref|ZP_03632254.1| conserved hypothetical membrane protein [bacterium Ellin514]
gi|223890949|gb|EEF57456.1| conserved hypothetical membrane protein [bacterium Ellin514]
Length = 259
Score = 38.6 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 22/140 (15%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSE----NLIISMQKKRTSPFHPTVIRI 56
M + LF++ G S + E ++ + K V R
Sbjct: 1 MRKTALVALFSILFTATGAWAGESTSAFPSPEIPEFTSCKQLVLVITKNWQAVPGAVWRF 60
Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSG---TF---GPKIETGDEQAPEGFYYIGWN 110
+ + WK+ V++ + G GP + GD ++P G + +
Sbjct: 61 ERAD-EHSPWKKVGGKIPVVVGRNGLAWGKGLNPPVDLPGPHKKEGDGKSPAGMFRLSS- 118
Query: 111 NLNPNSKYFLSINIGFPNEF 130
+ + PNE
Sbjct: 119 ----------AFGLAEPNEA 128
>gi|291532676|emb|CBL05789.1| Uncharacterized protein conserved in bacteria [Megamonas
hypermegale ART12/1]
Length = 395
Score = 38.6 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 30/181 (16%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
M LL + N ++++ E + +Q I I
Sbjct: 1 MKKFIVFLLLGVMFVFNTVAYAQAENTAQEKIGGADKATDIQVNNNVNTVKRWILINIPA 60
Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKY 118
L ++ + ++ Y + KIET + P GFY + +NP
Sbjct: 61 RSLRLYDND-----KCIEMYPVGVG------KIET---KTPVGFYKVVEKIVNPTWTDPA 106
Query: 119 FLSINIGFPNEFDKAHNRT----GADLMIHGEC--------ASAGCYAMNNKQMQEIYAI 166
+S+ I P+ D G + IHG S GC M +++++
Sbjct: 107 DVSVVI--PSGEDNPLGYRWIGIGGNYGIHGTNRPDSVGHYVSNGCVRMVEADVEKVFDK 164
Query: 167 V 167
V
Sbjct: 165 V 165
>gi|318075894|ref|ZP_07983226.1| lipoprotein [Streptomyces sp. SA3_actF]
Length = 237
Score = 38.6 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 58/173 (33%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P + ++++ K TV+ K WK + +W G G
Sbjct: 60 PAASRQVVAVYGKGIDSADSTVVLYTKTGKT---WKAS-------------ASWQGHNGK 103
Query: 92 K-----IETGDEQAPEGFYYI--------GWNNLNP--------------NSKYF---LS 121
K D+++P G Y + P S +
Sbjct: 104 KGWTTAHHENDKRSPVGVYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYV 163
Query: 122 INIGF-------PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163
I I + PN+ + +T G + + HG SA C +++ M+ +
Sbjct: 164 IAIDYNRVKGTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 215
>gi|89099286|ref|ZP_01172164.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911]
gi|89086132|gb|EAR65255.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911]
Length = 180
Score = 38.3 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 24/92 (26%)
Query: 100 APEGFYYIGWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLM-IHGEC- 147
PEG + + P Y+ NI G P N FD T + IHG
Sbjct: 63 TPEGLFTVTVKAKEP---YYRRKNIPGGSPENPLGTRWIGFDAE--ETDGRIYGIHGTNE 117
Query: 148 -------ASAGCYAMNNKQMQEIYAIVRDSLR 172
S+GC M N+ ++ ++ ++ +
Sbjct: 118 PGSIGKYVSSGCVRMQNEAIESLFELIPIGTK 149
>gi|262281175|ref|ZP_06058957.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257406|gb|EEY76142.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 167
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 46/136 (33%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK--------------YFLSIN 123
K Y I G + + P G++ + + S Y +
Sbjct: 27 KFYVISTGKNGIG--EQENTGRTPRGWHRV-AKKIGAESPQNAVFIARKPTGEVYSTELA 83
Query: 124 IGFPNEFDKAHNR--------TG-----------ADLMIHGECASA--------GCYAMN 156
+P E D +R TG + IHG + GC M
Sbjct: 84 AQYP-ERDWILSRILWLDGLETGFNKGEGHDTMQRYIYIHGTPDTQPMGVPMSHGCVRMR 142
Query: 157 NKQMQEIYAIV-RDSL 171
N+++ E++ +V D+L
Sbjct: 143 NEEIIELFDLVAEDAL 158
>gi|91788993|ref|YP_549945.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666]
gi|91698218|gb|ABE45047.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666]
Length = 176
Score = 38.3 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Query: 140 DLMIHG--------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176
+ IHG E S GC M N + E++ +V +Q
Sbjct: 116 YIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQ 160
>gi|114567178|ref|YP_754332.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338113|gb|ABI68961.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 283
Score = 38.3 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 38/140 (27%), Gaps = 34/140 (24%)
Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93
+ I K+ + I I + L + K Y + P
Sbjct: 74 PSSSIRLQNKREGQAWEQPRISIDVVKRRL----TYTSGSFK--KTYPVAVGK-PQTP-- 124
Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC----- 147
P G + I +NP + + + P G IHG
Sbjct: 125 ------TPLGNWTIVQKTVNPGGPFGARWMRLSVP---------WGGY-GIHGTNRPSSI 168
Query: 148 ---ASAGCYAMNNKQMQEIY 164
S GC M N + E+Y
Sbjct: 169 GKAVSHGCVRMYNADVIELY 188
>gi|312792945|ref|YP_004025868.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180085|gb|ADQ40255.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 223
Score = 38.3 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 45/175 (25%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-- 107
+P +I + +++ L ++K E +L K Y I P P G + I
Sbjct: 32 NPYLIYVSIDDSRLYVFK-----EGILYKSYPISPGK-PSTP--------TPVGTFKIIS 77
Query: 108 -GWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-------ADLMIHGECASAGCYAMNNKQ 159
+ ++ + + + + G + + H S GC M NK
Sbjct: 78 KDYWGEGFGGRW---MGLN------VRYGKYGIHGTIYESYIGAH---VSKGCVRMLNKD 125
Query: 160 MQEIYAI--------VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
++E+++ V + + G ++ + +P M + + F++
Sbjct: 126 VKELFSYIPIGTTVIVSEGIYGEFRNGFRT-IYPGDTGEDVMAVQRRLKELGFYS 179
>gi|153874337|ref|ZP_02002595.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
gi|152069197|gb|EDN67403.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
Length = 110
Score = 38.3 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 140 DLMIHG--------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
+ IHG + AS GC M N+ + E++ +V + + +++ +
Sbjct: 63 YIYIHGTAEENKIGQPASHGCIRMYNRDVIELFDLVMEGTKVDIRDEV 110
>gi|299768887|ref|YP_003730913.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1]
gi|298698975|gb|ADI89540.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1]
Length = 167
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 46/136 (33%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK--------------YFLSIN 123
K Y I G + + P G++ + + S Y +
Sbjct: 27 KFYVISTGKNGIG--EQENTGRTPRGWHRV-AKKIGAESPQNAVFIARKPTGEVYSTELA 83
Query: 124 IGFPNEFDKAHNR--------------TGAD-----LMIHGECASA--------GCYAMN 156
+P E D +R G D + IHG + GC M
Sbjct: 84 TQYP-ERDWILSRILWLDGLEEGFNKGEGHDTMQRYIYIHGTPDTQPMGVPMSHGCVRMR 142
Query: 157 NKQMQEIYAIV-RDSL 171
N+++ E++ +V D+L
Sbjct: 143 NEEIIELFDLVAEDAL 158
>gi|255526573|ref|ZP_05393481.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
gi|296187551|ref|ZP_06855946.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
gi|255509758|gb|EET86090.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
gi|296048073|gb|EFG87512.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
Length = 125
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 37/129 (28%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112
I+I + L +++ N + K Y++ P P+G + I +
Sbjct: 17 YIKINTQSHTLTLFRNNS-----IYKTYRVAVGK-PSTP--------TPKGTFKIINRAI 62
Query: 113 NPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQ 161
NP + +L +N + D IHG S GC M N Q+
Sbjct: 63 NPGGPFGSRWLGLNAPY------------GDYGIHGTNTPSSIGKSISNGCIRMFNNQVI 110
Query: 162 EIYAIVRDS 170
E+ +V
Sbjct: 111 ELSNLVPIG 119
>gi|255576877|ref|XP_002529324.1| conserved hypothetical protein [Ricinus communis]
gi|223531195|gb|EEF33041.1| conserved hypothetical protein [Ricinus communis]
Length = 576
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR-MTSKNMQLYQNNPNYSF-- 204
+ GC + + E + + + +IQ++A PFR ++++M +N+ F
Sbjct: 22 SDDGCSPLTYYSLVETSKFAQLWVPFCKKYNIQVRA-PFRYFSNESMISARNS--LEFQQ 78
Query: 205 -WNMLKLGHDYFEKN 218
W MLK G++ F N
Sbjct: 79 EWKMLKDGYEEFSHN 93
>gi|125972839|ref|YP_001036749.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
gi|256005881|ref|ZP_05430828.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
2360]
gi|125713064|gb|ABN51556.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
gi|255990150|gb|EEU00285.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
2360]
gi|316940925|gb|ADU74959.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
1313]
Length = 230
Score = 38.3 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 41/129 (31%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI----G 108
I I +E L ++K + VLLK Y + P +PEG + I
Sbjct: 35 YIYINLDELKLYLYK-----DGVLLKTYPVSGGK-PETP--------SPEGTWKIISKSD 80
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG---------ECASAGCYAMNNKQ 159
W S + + P + G IHG + AS GC M NK
Sbjct: 81 WGGNFGGSW----MGLNVP------WGQYG----IHGTKYPWYIGRQNASHGCIRMYNKN 126
Query: 160 MQEIYAIVR 168
+E+Y IV
Sbjct: 127 AKELYDIVP 135
>gi|281417038|ref|ZP_06248058.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
gi|281408440|gb|EFB38698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
Length = 230
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 41/129 (31%)
Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI----G 108
I I +E L ++K + VLLK Y + P +PEG + I
Sbjct: 35 YIYINLDELKLYLYK-----DGVLLKTYPVSGGK-PETP--------SPEGTWKIISKSD 80
Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG---------ECASAGCYAMNNKQ 159
W S + + P + G IHG + AS GC M NK
Sbjct: 81 WGGNFGGSW----MGLNVP------WGQYG----IHGTKYPWYIGRQNASHGCIRMYNKN 126
Query: 160 MQEIYAIVR 168
+E+Y IV
Sbjct: 127 AKELYDIVP 135
>gi|226952587|ref|ZP_03823051.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
gi|294649883|ref|ZP_06727283.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836667|gb|EEH69050.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
gi|292824257|gb|EFF83060.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 412
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 51/180 (28%), Gaps = 54/180 (30%)
Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK- 81
R L +A I+ + P +I K L ++ ++ ++ +
Sbjct: 250 RQLNPRANFNKVGEKIVVANVRNDLPEDIHLIVAHKGAKQLYLF----NSRNQMIASFPA 305
Query: 82 -ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPN 128
I + S +P G Y + NP Y LS+ G PN
Sbjct: 306 TIGSTSTP-----------SPTGTYKVTGVAKNPWYSYSPSNFVQGKNLKPLSLPPG-PN 353
Query: 129 EFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171
++ I HG S GC + N ++ VR +
Sbjct: 354 -------GPVGNIWIGLSKKSFGIHGTPNPSMISKNASHGCIRLTNWDANDLGNKVRAGV 406
>gi|116253083|ref|YP_768921.1| ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115257731|emb|CAK08829.1| putative ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 462
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 40/193 (20%)
Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHP---TVIRIFKNENI 62
++ + L H K +P ++ + K +P P V RI ++
Sbjct: 277 SLAYTSTTEMLAERFHMDEAFLKEMNPGADFTVPGTVIKVVNPGEPKSGAVARIIADKGR 336
Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122
+++ D LL Y S D +P G + LNP Y +
Sbjct: 337 KQVFA--YDGAGNLLAAYPASIGST---------DTPSPSGTVNVERVALNPG--YTYNP 383
Query: 123 NIGFPN-EFDK-AHNRTG-----ADLM---------IHGEC--------ASAGCYAMNNK 158
I F DK + G + IHG S GC + N
Sbjct: 384 KINFQQGANDKILNIPPGPNGPVGTVWMALSKPTYGIHGTPEPSKIGRTQSHGCIRLTNW 443
Query: 159 QMQEIYAIVRDSL 171
E+ +V+ +
Sbjct: 444 DATELAKMVKPGV 456
>gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1]
gi|49529986|emb|CAG67698.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 167
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 43/132 (32%)
Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN------------NLNPNSKYFLS-INI 124
K Y I + G + + P G++ I P + + S +
Sbjct: 25 KCYSISSGKNGIG--EQENTGKTPRGWHQIAEKIGATALENTVFIGRKPTGELYNSVLAE 82
Query: 125 GFPNEFDKAHNR------------TGA-------DLMIHGECASA--------GCYAMNN 157
FP E D +R G + IHG + GC M N
Sbjct: 83 QFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYIYIHGTPDTEPMGIAMSHGCIRMRN 141
Query: 158 KQMQEIYAIVRD 169
+ + E++ +V +
Sbjct: 142 RDVIELFDLVPE 153
>gi|296502714|ref|YP_003664414.1| hypothetical protein BMB171_C1880 [Bacillus thuringiensis BMB171]
gi|296323766|gb|ADH06694.1| hypothetical protein BMB171_C1880 [Bacillus thuringiensis BMB171]
Length = 266
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 37/183 (20%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
I+L + L+GC + I+ P + L KK S + K I +
Sbjct: 11 IVLSIVSSLLSGCGFGETKIEY--EPFVKALDEGDMKKVMSASDDGYAYV-KQRGIYSTY 67
Query: 67 KRNVDAEYVLLKE-YKICAWSGTFGPKIETG-------------DEQAPEGFYYIGWNNL 112
++ D E+ K Y+ K G D + EG Y
Sbjct: 68 EQKEDGEHS--KTIYQTSKGIYNTKDKSLYGSTTQAVTSAVDSKDNKK-EGVYRTNIMYK 124
Query: 113 N-----PNSKYFLSINIGFPNE-FDKAHN------RTGADLMIHGECASAGCYAMNNKQM 160
N P+S +++ + N D+ + G D+ + ++ G Y +
Sbjct: 125 NGQVKSPDSN----LDVSYVNLIVDRLKGIGKLKMKPGGDIKKFDQPSTVG-YKLTESDF 179
Query: 161 QEI 163
Q I
Sbjct: 180 QSI 182
>gi|307826414|ref|ZP_07656614.1| hypothetical protein MettuDRAFT_4461 [Methylobacter tundripaludum
SV96]
gi|307732532|gb|EFO03409.1| hypothetical protein MettuDRAFT_4461 [Methylobacter tundripaludum
SV96]
Length = 74
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82
L ++S + SP I + K E LE+W R+ E+ +++Y I
Sbjct: 27 LGTTRLLSRSEGVLSPREVIFIAL-KQEKKLELWARD-SGEFRFIRDYYI 74
>gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 199
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 128 NEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
N G + IHG S+GC M N+ + ++Y V+ R +Q
Sbjct: 141 NPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVADLYGRVKVGARVIVQR 199
>gi|229144723|ref|ZP_04273122.1| hypothetical protein bcere0012_18830 [Bacillus cereus BDRD-ST24]
gi|228638684|gb|EEK95115.1| hypothetical protein bcere0012_18830 [Bacillus cereus BDRD-ST24]
Length = 258
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 37/183 (20%)
Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66
I+L + L+GC + I+ P + L KK S + K I +
Sbjct: 3 IVLSIVSSLLSGCGFGETKIEY--EPFVKALDEGDMKKVMSASDDGYAYV-KQRGIYSTY 59
Query: 67 KRNVDAEYVLLKE-YKICAWSGTFGPKIETG-------------DEQAPEGFYYIGWNNL 112
++ D E+ K Y+ K G D + EG Y
Sbjct: 60 EQKEDGEHS--KTIYQTSKGIYNTKDKSLYGSTTQAVTSAVDSKDNKK-EGVYRTNIMYK 116
Query: 113 N-----PNSKYFLSINIGFPNE-FDKAHN------RTGADLMIHGECASAGCYAMNNKQM 160
N P+S +++ + N D+ + G D+ + ++ G Y +
Sbjct: 117 NGQVKSPDSN----LDVSYVNLIVDRLKGIGKLKMKPGGDIKKFDQPSTVG-YKLTESDF 171
Query: 161 QEI 163
Q I
Sbjct: 172 QSI 174
>gi|182678754|ref|YP_001832900.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634637|gb|ACB95411.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 199
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177
G+ S+GC M N+ + ++Y+ V+ R +Q
Sbjct: 167 GQAVSSGCIRMTNEDVTDLYSRVKVGTRVIVQR 199
>gi|222056221|ref|YP_002538583.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
gi|221565510|gb|ACM21482.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
Length = 277
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 30/92 (32%)
Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL---- 141
SGT G + P G + + + N S + E D A +
Sbjct: 146 SGTKGH-------ETPTGLFRVDARHRNHTSSLYK-------TEDDTAQYPMDNAIRFHI 191
Query: 142 -------MIH-----GECASAGCYAMNNKQMQ 161
IH G+ AS GC + ++ MQ
Sbjct: 192 GPDNVSYWIHARDLPGKPASHGCVGLADEGMQ 223
>gi|91776201|ref|YP_545957.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
gi|91710188|gb|ABE50116.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
Length = 160
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 8/37 (21%)
Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168
+ IHG S GC M N ++E++ +V
Sbjct: 114 YIYIHGTPECEPMGEAHSHGCIRMRNADVRELFDLVP 150
>gi|257454013|ref|ZP_05619287.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
gi|257448491|gb|EEV23460.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
Length = 165
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 50/164 (30%), Gaps = 56/164 (34%)
Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108
+ +I I K + L + + Y I G +TG P G + I
Sbjct: 3 YPKIIISIKKQQLTLCLSSNQS-------QTYPISTAKNGIGQLQDTG--CTPLGAHVIS 53
Query: 109 W---NNLNPNSKY------------FLSINIGFPNE----------------FDKAHNRT 137
+NL NS + +L+ FPN F+K N
Sbjct: 54 EKFGDNLPINSVFVARKFTGEIYDDYLA--TTFPNRDWILTRILWLEGCEEGFNKGANEQ 111
Query: 138 G------ADLMIHGECASA--------GCYAMNNKQMQEIYAIV 167
G + IHG + GC M N+ + +Y V
Sbjct: 112 GVCDTKARYIYIHGTPNTEPMGIPLSHGCIRMRNQDIITLYDQV 155
>gi|303239802|ref|ZP_07326326.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
gi|302592739|gb|EFL62463.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
Length = 123
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 19/77 (24%)
Query: 100 APEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASA 150
P+G Y I +NP + + + P +G IHG S
Sbjct: 48 TPKGTYRIINKAVNPGGPFGARWLGLSIP---------SGGY-GIHGTNDPSSIGKAVSH 97
Query: 151 GCYAMNNKQMQEIYAIV 167
GC M+N + +Y IV
Sbjct: 98 GCVRMHNNDVITLYNIV 114
>gi|197303997|ref|ZP_03169029.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC
29176]
gi|197296965|gb|EDY31533.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC
29176]
Length = 495
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 19/90 (21%)
Query: 98 EQAPEGFYYIGWNNLN--------PNSKYFLSINIGF--------PNEFDKAHNRT-GAD 140
Q PEG Y I N P+ Y + + D RT G D
Sbjct: 401 RQTPEGVYTILERMRNKTLRGALKPDGTYEYETPVDYWMRVTYSGVGFHDATWQRTFGGD 460
Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDS 170
+ + S GC M+ ++Y +++
Sbjct: 461 VYTYRG--SHGCINMSYSDAGQLYDLIQVG 488
>gi|196248476|ref|ZP_03147177.1| conserved hypothetical protein [Geobacillus sp. G11MC16]
gi|196212201|gb|EDY06959.1| conserved hypothetical protein [Geobacillus sp. G11MC16]
Length = 158
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 54/132 (40%)
Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYI-----------------------GWNNLNPNSK 117
++ G K + GD + P G Y + + +P SK
Sbjct: 6 RVVVGKNGIG-KQKEGDGKTPAGVYPLGTAFGTAKKPAGLKIPYRQTTAYDYWVDDPTSK 64
Query: 118 ------YFL--------SI-NIGFP----------NEFDKAHNRTGADLMIHGECA---- 148
Y+ S + P N+ + G+ + +H
Sbjct: 65 DYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRYNDSPIVKGK-GSAIFLHIWPRPSSY 123
Query: 149 SAGCYAMNNKQM 160
+ GC AM K +
Sbjct: 124 TLGCIAMAEKDL 135
>gi|118578915|ref|YP_900165.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
gi|118501625|gb|ABK98107.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
2379]
Length = 292
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 100 APEGFYYIGWNNLNPNSKYFLSIN--IGFP--NEFDKAHNRTGADLMIH-----GECASA 150
P G + I +L S + + N +P N G +H G AS
Sbjct: 162 TPTGLFRITARHLTHTSSLYKTANDEEQYPMDNAMRFHVGPDGVSYWLHARDLPGRPASH 221
Query: 151 GCYAMNNKQMQ 161
GC + +++MQ
Sbjct: 222 GCIGLYDEEMQ 232
>gi|312114874|ref|YP_004012470.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311220003|gb|ADP71371.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 139
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 41/133 (30%)
Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW-- 109
+RI K+ ++ ++ + + + G P G Y
Sbjct: 25 VEVRISKSRQMMYVYL-----DGEHYYSWPVSTARGG---------YNTPNGVYRPQRLA 70
Query: 110 ---------NNLNPNSKYF---LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNN 157
N+ P S +F +I+ + D+ G S GC ++
Sbjct: 71 VFHRSSKYNNSPMPYSIFFHGGYAIHGSY-------------DIGNLGRPVSHGCIRLHP 117
Query: 158 KQMQEIYAIVRDS 170
+ +E+Y +V DS
Sbjct: 118 EDARELYGLVSDS 130
>gi|254473519|ref|ZP_05086915.1| protein ybis [Pseudovibrio sp. JE062]
gi|211957231|gb|EEA92435.1| protein ybis [Pseudovibrio sp. JE062]
Length = 235
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLR 172
G+ S+GC M N+ + E+Y +V +
Sbjct: 204 GQAVSSGCIRMRNEDVAELYNMVPVGAK 231
>gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
gi|71847444|gb|AAZ46940.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
Length = 160
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Query: 140 DLMIHG--------ECASAGCYAMNNKQMQEIYAIVR 168
+ IHG S GC M N + E++ +V
Sbjct: 114 YIYIHGCPDSSEIGSPGSHGCIRMRNADIVELFDLVP 150
>gi|189423804|ref|YP_001950981.1| hypothetical protein Glov_0735 [Geobacter lovleyi SZ]
gi|189420063|gb|ACD94461.1| conserved hypothetical protein [Geobacter lovleyi SZ]
Length = 358
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 19/113 (16%)
Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60
+ + ++ + G L++++ + R S +++I+ E
Sbjct: 42 IITHFFLIGLLMISGCAGQPSDSQSSLNGTVITGNQLLVALAESRDSS----MVKIYAFE 97
Query: 61 NILEIWKRNVDAEYVLLKEYKIC-----AWSGTFGPKIETGDEQAPEGFYYIG 108
+ W+ L+ + G K GD +AP G + +
Sbjct: 98 RTVLGWE---------LRTGPLAGVTGRNGFAPAGDK-REGDGRAPTGLFALE 140
>gi|170742571|ref|YP_001771226.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
gi|168196845|gb|ACA18792.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
Length = 214
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQE 162
P+ +++ I N G L IHG S+GC M N + +
Sbjct: 142 RRPDLPRYMAGGID--NPLGARAMYIGGTLYRIHGSNEPDTIGQAVSSGCIRMTNDDVTD 199
Query: 163 IYAIVRDSLR 172
+Y V+ R
Sbjct: 200 LYERVKVGSR 209
>gi|182439758|ref|YP_001827477.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|62896365|emb|CAH94386.1| putative thiamine biosynthesis lipoprotein precursor ApbE
[Streptomyces griseus subsp. griseus]
gi|178468274|dbj|BAG22794.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 235
Score = 37.5 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 117 KYFLSINIGFPNEFDK-AHNRTGADLMIH--GECASAGCYAMNNKQMQEIYA 165
+Y ++ +GF +D+ R GA + +H G A+AGC ++ M EI A
Sbjct: 163 QYARALVVGF--NYDRPVRGR-GAGIFLHVNGRGATAGCVSVPADAMAEILA 211
>gi|116626900|ref|YP_829056.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116230062|gb|ABJ88771.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 182
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 145 GECASAGCYAMNNKQMQEIYAIVR--DSLRGNMQSHIQI-QAF 184
G AS GC M N+ ++E++ +V D + + ++ F
Sbjct: 125 GRNASHGCIRMRNRDVEELFKMVAVGDQVELRGERDAEVAHIF 167
>gi|328952431|ref|YP_004369765.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
gi|328452755|gb|AEB08584.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
11109]
Length = 314
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 39/144 (27%)
Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107
P HP ++ N + ++ + + + Y I D + P G + +
Sbjct: 103 PEHPIIV----NTGEMRLYFFTDN--FTKVITYPIGMGVL---------DFKTPTGVFKV 147
Query: 108 GWNNLNP--------NSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------- 147
NP +KY +S+ P D + + D IHG
Sbjct: 148 TEKKTNPPWFVPKTLQAKYGMSVMESGP---DNPLGKYKLTLSWGDYGIHGTSQPFGVGR 204
Query: 148 -ASAGCYAMNNKQMQEIYAIVRDS 170
S GC M + +++++ +V+
Sbjct: 205 LVSHGCTRMYPEHIEKLFPLVKVG 228
>gi|253577644|ref|ZP_04854953.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251842971|gb|EES71010.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 112
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 27/122 (22%)
Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113
I + ++ +L + N +++ + + + Q P G Y I N
Sbjct: 6 IIVDISDRMLYLLDNNN-----VVRGFPVGIGTMLT---------QTPVGSYTIVNKAPN 51
Query: 114 PNSKY-FLSINIGFPNEFDKAHNRTGAD----LMIHGECASAGCYAMNNKQMQEIYAIVR 168
P + + + P + G D + G+ S GC M N + E+ IV
Sbjct: 52 PGGPFGAYWMGLSKP-----HYGIHGTDDPSSI---GKEVSHGCIRMYNPDVIELARIVP 103
Query: 169 DS 170
Sbjct: 104 IG 105
>gi|262376717|ref|ZP_06069945.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145]
gi|262308427|gb|EEY89562.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145]
Length = 177
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 9/41 (21%)
Query: 140 DLMIHGECASA--------GCYAMNNKQMQEIYAIV-RDSL 171
+ IHG + GC M N ++ E++ ++ D+L
Sbjct: 118 YIYIHGTPETEKMGEPLSHGCIRMRNPEVAELFDLISEDAL 158
>gi|83950058|ref|ZP_00958791.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
gi|83837957|gb|EAP77253.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
Length = 176
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179
G +S GC + N++++E+YA+V Q I
Sbjct: 145 GRRSSDGCIGLYNEKIEELYALVP----IGTQVRI 175
>gi|220925047|ref|YP_002500349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
2060]
gi|219949654|gb|ACL60046.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
2060]
Length = 215
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 11/70 (15%)
Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQE 162
P+ +++ I N G L IHG S+GC M N+ + +
Sbjct: 143 RRPDLPRYMAGGID--NPLGARAMYIGGTLYRIHGSNEPDTIGQAVSSGCIRMTNEDVTD 200
Query: 163 IYAIVRDSLR 172
+Y V+ +
Sbjct: 201 LYDRVKVGTK 210
>gi|225181547|ref|ZP_03734989.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT
1]
gi|225167795|gb|EEG76604.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT
1]
Length = 172
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 21/118 (17%)
Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFD 131
+ K Y I D P G + + N P+ + +
Sbjct: 18 QGQYYKTYPIAIGKP---------DTPTPLGEFSVYEKNPRPHQMLGTRWMAFTY----- 63
Query: 132 KAHNRTGA-DLMIHGECASAGCYAMNNKQMQEIYAIVRDS-----LRGNMQSHIQIQA 183
+ H G + G A+AGC M N+ ++E++ + + I
Sbjct: 64 QRHGIHGTFNPWTIGTAATAGCVRMYNEDVEELFPLTPIGTPVIIFEKEEKVKIPEHI 121
>gi|312127038|ref|YP_003991912.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777057|gb|ADQ06543.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 223
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 58/179 (32%), Gaps = 53/179 (29%)
Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-- 107
+P +I + +++ L ++K E +L K Y I P P G + I
Sbjct: 32 NPYLIYVSIDDSRLYVFK-----EGILYKSYPISPGK-PSTP--------TPVGTFKIIS 77
Query: 108 -GWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-------ADLMIHGECASAGCYAMNNKQ 159
+ ++ + + + + G + + H S GC M NK
Sbjct: 78 KDYWGEGFGGRW---MGLN------VRYGKYGIHGTIYESYIGAH---VSKGCVRMLNKD 125
Query: 160 MQEIYAIVRDS------------LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206
++E+++ + R ++ +P M + + F++
Sbjct: 126 VKELFSYIPIGTTVIISQGEYGEFRNGFRT-----IYPGDTGEDVMAVQRRLKELGFYS 179
>gi|300702670|ref|YP_003744270.1| hypothetical protein RCFBP_10313 [Ralstonia solanacearum CFBP2957]
gi|299070331|emb|CBJ41623.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 164
Score = 36.7 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 23/102 (22%)
Query: 101 PEGFYYIGWNNLNPNS--------------KYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
PEG Y+I + L N+ Y L+I+ +P + + R G +HG
Sbjct: 67 PEGDYWIQPSQLWENNWFKSLVRTPRASWGNYRLTIH-PYPGT--QTYGRGG--FFLHGG 121
Query: 147 --CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA-FP 185
SAGC + QM + ++ +L G + ++Q+ +P
Sbjct: 122 TVPGSAGCIDLV-GQMDRFVSRLKQALGGLPECYVQLYVRYP 162
>gi|89892890|ref|YP_516377.1| hypothetical protein DSY0144 [Desulfitobacterium hafniense Y51]
gi|219666153|ref|YP_002456588.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense
DCB-2]
gi|89332338|dbj|BAE81933.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536413|gb|ACL18152.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense
DCB-2]
Length = 115
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 21/80 (26%)
Query: 100 APEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SA 150
P G Y + +NP + + + P D IHG S
Sbjct: 41 TPLGNYAVATKVMNPGGAFGTRWLGLSLP------------DYGIHGTNKPASIGTQASL 88
Query: 151 GCYAMNNKQMQEIYAIVRDS 170
GC M+N ++ +Y V
Sbjct: 89 GCIRMHNHHVEALYDQVGAG 108
>gi|261378319|ref|ZP_05982892.1| protein C- splicing region domain protein [Neisseria cinerea ATCC
14685]
gi|269145420|gb|EEZ71838.1| protein C- splicing region domain protein [Neisseria cinerea ATCC
14685]
Length = 579
Score = 36.3 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 20/96 (20%)
Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188
D+A +TG + +A N + +Y V D + GN Q+ I + PF
Sbjct: 376 AKDEASGKTGY------KPVTA---QYGNPYRETVYIEVSDGI-GNSQTLISNRIHPF-- 423
Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFI 224
Y + LK G F +N EP +
Sbjct: 424 -------YSDGKWIKA-EDLKAGSRLFAENGAEPTV 451
>gi|90425734|ref|YP_534104.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
gi|90107748|gb|ABD89785.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
Length = 191
Score = 36.3 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 44/155 (28%), Gaps = 44/155 (28%)
Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91
P+ + + P I I E L + + L+ Y I
Sbjct: 46 PIPRTTVNFASN-----YAPGTIYIDTAERRLYLILQG----GQALR-YGIGVGRDG--- 92
Query: 92 KIETGDEQAPEGFYYIGWN-------------NLNPNSKYFLSINIGFPNEFDKAHNRTG 138
G G + I P+ ++ I N G
Sbjct: 93 -FRWG------GVHRITAKKEWPSWTPPSQMLRRRPDLPRHMAGGID--NPLGARAMYLG 143
Query: 139 ADLM-IHGEC--------ASAGCYAMNNKQMQEIY 164
+ L IHG S+GC+ M N+ +Q++Y
Sbjct: 144 STLYRIHGSNEPETIGQAVSSGCFRMTNEDVQDLY 178
>gi|207721999|ref|YP_002252437.1| hypothetical protein RSMK02318 [Ralstonia solanacearum MolK2]
gi|206587172|emb|CAQ17756.1| hypothetical protein RSMK02318 [Ralstonia solanacearum MolK2]
Length = 129
Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 23/102 (22%)
Query: 101 PEGFYYIGWNNLNPNS--------------KYFLSINIGFPNEFDKAHNRTGADLMIHGE 146
PEG Y+I + L N+ Y L+I+ +P + + R G +HG
Sbjct: 32 PEGDYWIQPSQLWENNWFKSLVRTPRASWGNYRLTIH-PYPGT--QTYGRGG--FFLHGG 86
Query: 147 --CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA-FP 185
SAGC + QM + ++ +L G + ++Q+ +P
Sbjct: 87 TVPGSAGCIDLV-GQMDRFVSRLKQALGGLPECYVQLYVRYP 127
>gi|332305840|ref|YP_004433691.1| hypothetical protein Glaag_1464 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173169|gb|AEE22423.1| hypothetical protein Glaag_1464 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 71
Score = 35.6 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 4 RYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQK--KRTSPFHPTVIRIFKNE 60
RY+++L +LF+ L+GC S+ D A+ P S+ + Q+ +R+ K +
Sbjct: 2 RYSVMLSSLFMLGLSGCAASKDDQDVAKQPFSQRCEDAKQELDNAVEEGQLADLRVLKQD 61
Query: 61 NILE-IWKRN 69
L +W+RN
Sbjct: 62 IELYCVWRRN 71
>gi|297155098|gb|ADI04810.1| putative lipoprotein [Streptomyces bingchenggensis BCW-1]
Length = 236
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 62/206 (30%), Gaps = 61/206 (29%)
Query: 13 FIFLNGCHHSRSLID----------KAEHPLSENLIISMQKKRTSPFHP----TVIRIFK 58
I L C + D ++ P+S+ I P V+ ++
Sbjct: 11 LILLTACGGAGGDGDKSGGQGKQALRSSAPVSDPTRIPKVGDALQAKIPADSRQVVAVYG 70
Query: 59 N-----ENILEIWKRNVDAEYVLLKEYKICAWSGT--FGPKIETGDEQAPEGFYYI---- 107
N ++ + ++ + ++ + + G GD+++P G Y +
Sbjct: 71 NGVNSADSTVVLYTK-QGKKWERTRSWAAHNGKRGWTTGH--REGDKRSPVGVYSLSDAG 127
Query: 108 ----GWNNLNPNSK-----------------YFLSINIGF-------PNEFDKAHNRT-G 138
P ++ + I I + P + + ++ G
Sbjct: 128 GVLPDPGARLPYNQAAAFAAPHYWPKTHWHDFDYVIAIDYNRVKGTSPLDPTRPQGQSKG 187
Query: 139 ADLMI---HGECASAGCYAMNNKQMQ 161
+ + HG SA C ++ M+
Sbjct: 188 GSIWLHMDHGSGTSA-CVSVPKSGME 212
>gi|307323269|ref|ZP_07602479.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
4113]
gi|306890758|gb|EFN21734.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
4113]
Length = 246
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 63/218 (28%), Gaps = 59/218 (27%)
Query: 1 MTNRYNILLFALFIFLNGCHHS--------------RSLIDKAEHPLSENL--IISMQKK 44
M+ R A + L C ++L A P + + +
Sbjct: 7 MSMRAAAAAAAALVLLTACGDGGGDSGGDKGGSSGKQALRSGAPAPDPTRIPDVGDTLQS 66
Query: 45 RTSPFHPTVIRIFKN-----ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99
R V+ ++ + + ++ + + + G + GD++
Sbjct: 67 RIPDQSRQVVAVYGKGVNSADATVVLYTK-QGKAWERTHSWTAHNGKGGWTTSHHEGDKR 125
Query: 100 APEGFYYIG----------------------WNNLNPNSK---YFLSINIGF-------P 127
+P G Y + + P S + I I + P
Sbjct: 126 SPVGVYTLSDAGGVLPDPGARLPYTASGSFAAPHYWPKSHWTDFNYVIAIDYNRVKGASP 185
Query: 128 NEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQ 161
+ + ++ G + + HG SA C +++ M+
Sbjct: 186 LDQTRPEGQSKGGSIWLHMDHGSGTSA-CVSLSKSGME 222
>gi|37520480|ref|NP_923857.1| hypothetical protein gll0911 [Gloeobacter violaceus PCC 7421]
gi|35211474|dbj|BAC88852.1| gll0911 [Gloeobacter violaceus PCC 7421]
Length = 243
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 90 GPKIETGDEQAPEGFYYIG 108
GP GD ++P G Y +
Sbjct: 86 GPTKREGDGRSPAGVYRLN 104
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.309 0.158 0.536
Lambda K H
0.267 0.0490 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,356,740,456
Number of Sequences: 14124377
Number of extensions: 273641899
Number of successful extensions: 502226
Number of sequences better than 10.0: 1020
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 652
Number of HSP's that attempted gapping in prelim test: 498583
Number of HSP's gapped (non-prelim): 1730
length of query: 239
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 104
effective length of database: 2,936,002,735
effective search space: 305344284440
effective search space used: 305344284440
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 80 (35.2 bits)