BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780590|ref|YP_003065003.1| hypothetical protein
CLIBASIA_02385 [Candidatus Liberibacter asiaticus str. psy62]
         (91 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|316932614|ref|YP_004107596.1| hypothetical protein Rpdx1_1238 [Rhodopseudomonas palustris DX-1]
 gi|315600328|gb|ADU42863.1| hypothetical protein Rpdx1_1238 [Rhodopseudomonas palustris DX-1]
          Length = 87

 Score =  112 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          S+     + D     ++ Q A+ Y +EAWAE + +G++ + +A A++  A  E V  +GE
Sbjct: 2  SLTTFPIDCDVPSDRDQKQTALSYLSEAWAEALHDGVDGDCLAQASLFTAFAELVATYGE 61

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
          + +   ++ L  R+L GEFS     Q
Sbjct: 62 DAVAKFVEGLPGRVLNGEFSIGLAKQ 87


>gi|39934146|ref|NP_946422.1| hypothetical protein RPA1071 [Rhodopseudomonas palustris CGA009]
 gi|192289669|ref|YP_001990274.1| hypothetical protein Rpal_1259 [Rhodopseudomonas palustris TIE-1]
 gi|39647994|emb|CAE26514.1| conserved hypothetical protein [Rhodopseudomonas palustris
          CGA009]
 gi|192283418|gb|ACE99798.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 87

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          S+     + +     E+ Q A+ Y +EAWAE + +G++ + +A A++  A  E V  +GE
Sbjct: 2  SLTTFPIDREVQSDREQKQTALTYLSEAWAEALHDGVDGDCLAQASLFTAFAELVATYGE 61

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
          + +   ++ L  R+L GEFS     Q
Sbjct: 62 DAVAKFVEGLPGRVLNGEFSVGLAKQ 87


>gi|91975721|ref|YP_568380.1| hypothetical protein RPD_1241 [Rhodopseudomonas palustris BisB5]
 gi|91682177|gb|ABE38479.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 87

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 45/86 (52%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          S+     + D     E+ Q A+ Y +EAWAE + +G++ + +A A++  A  E V  +GE
Sbjct: 2  SLTTYPTDRDMQADREQKQTALSYLSEAWAEALHDGVDGDCLAQASLFTAFAELVGTYGE 61

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
          + +   ++ L  R+  GEFS     Q
Sbjct: 62 DAVAKFVEGLPGRVRNGEFSVAMAKQ 87


>gi|86748251|ref|YP_484747.1| hypothetical protein RPB_1126 [Rhodopseudomonas palustris HaA2]
 gi|86571279|gb|ABD05836.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 87

 Score =  107 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 44/86 (51%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          S      + D     ++ Q A+ Y +EAWAE + +G++ + +A A++  A  E V  +GE
Sbjct: 2  SATTYPTDSDMQADRDQKQTALSYLSEAWAEALHDGVDGDCLAQASLFTAFAELVGTYGE 61

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
          + +   ++ L  R+  GEFS     Q
Sbjct: 62 DAVAKFVEGLPGRVRNGEFSIALAKQ 87


>gi|148253869|ref|YP_001238454.1| hypothetical protein BBta_2379 [Bradyrhizobium sp. BTAi1]
 gi|146406042|gb|ABQ34548.1| hypothetical protein BBta_2379 [Bradyrhizobium sp. BTAi1]
          Length = 88

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query: 16 ALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSL 75
          AL  HE+ Q A+ Y NEAWAE   +G++ + +A A++  A+ E V  +GE+ + + ++ +
Sbjct: 13 ALPDHEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAALAELVSTYGEDAVATFVEGM 72

Query: 76 MSRMLAGEFSPERVIQ 91
            R+  GEFS  R  Q
Sbjct: 73 PERVRNGEFSLSRATQ 88


>gi|27377671|ref|NP_769200.1| hypothetical protein bsl2560 [Bradyrhizobium japonicum USDA 110]
 gi|27350816|dbj|BAC47825.1| bsl2560 [Bradyrhizobium japonicum USDA 110]
          Length = 88

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 42/76 (55%)

Query: 16 ALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSL 75
           L  HE+ Q A+ Y NEAWAE   +G++ + +A A++  A  E V  +GE+ +   ++  
Sbjct: 13 PLPDHEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAAFAELVGTYGEDAVAKFVEGF 72

Query: 76 MSRMLAGEFSPERVIQ 91
            R+  GEFS +   Q
Sbjct: 73 PGRIRNGEFSVDISRQ 88


>gi|90425801|ref|YP_534171.1| hypothetical protein RPC_4329 [Rhodopseudomonas palustris BisB18]
 gi|90107815|gb|ABD89852.1| hypothetical protein RPC_4329 [Rhodopseudomonas palustris BisB18]
          Length = 88

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 15 DALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKS 74
          D L   E+ Q A+ Y NEAWAE   +G++ + +A A++  A  E V  +GE+ +   ++ 
Sbjct: 12 DPLPDQEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAAFAELVGTYGEDAVAKFVEG 71

Query: 75 LMSRMLAGEFSPERVIQ 91
          L  R+  GEFS     Q
Sbjct: 72 LPGRVRNGEFSLALARQ 88


>gi|299134705|ref|ZP_07027897.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gi|298590515|gb|EFI50718.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 87

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 44/76 (57%)

Query: 16 ALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSL 75
           L   E+ Q A+ Y NEAWAE + +GI+ + +A A++  A  E V  +GE+ +   ++ L
Sbjct: 12 PLPDQEQKQAALTYLNEAWAEALHDGIDGDCLAQASLFAAFAELVNTYGEDAVAKFVEGL 71

Query: 76 MSRMLAGEFSPERVIQ 91
           +R+ +GEFS     Q
Sbjct: 72 PARIRSGEFSVVMFKQ 87


>gi|239831507|ref|ZP_04679836.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239823774|gb|EEQ95342.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 107

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 61/88 (69%)

Query: 4   IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
           ++S+E    + D ++  EK  VAIEY NEAWA+G++EGIEPEI+A AA T A+ E +R  
Sbjct: 20  MKSMEHAPADLDEMIAREKKLVAIEYHNEAWADGISEGIEPEILAEAAFTTALTELIREA 79

Query: 64  GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
           G++    L++ +  +++AG F P+RV+Q
Sbjct: 80  GDDCALELIEKMREQIVAGTFLPQRVLQ 107


>gi|92119417|ref|YP_579146.1| hypothetical protein Nham_4017 [Nitrobacter hamburgensis X14]
 gi|91802311|gb|ABE64686.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 88

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 46/88 (52%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          +R     +   D+L   E+ Q A+ Y NEAWAE   +G++ + +A A++  A  E V  +
Sbjct: 1  MRQPFAFSPARDSLPDQEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAAFAELVSTY 60

Query: 64 GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
          GE+ +   ++ L  R+  GEFS     Q
Sbjct: 61 GEDAVAKFVEGLAGRVRNGEFSIALARQ 88


>gi|115526380|ref|YP_783291.1| hypothetical protein RPE_4387 [Rhodopseudomonas palustris BisA53]
 gi|115520327|gb|ABJ08311.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 87

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 15 DALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKS 74
          D    HE+ Q A+ Y NEAWAE   +G++ + +A A++  A  E V  +GE+ +   ++ 
Sbjct: 11 DPRPDHEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAAFAELVGTYGEDAVAKFVEG 70

Query: 75 LMSRMLAGEFSPERVIQ 91
          L +R+  GEFS     Q
Sbjct: 71 LANRVRNGEFSLTLARQ 87


>gi|209886046|ref|YP_002289903.1| hypothetical protein OCAR_6930 [Oligotropha carboxidovorans OM5]
 gi|209874242|gb|ACI94038.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 87

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 45/76 (59%)

Query: 16 ALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSL 75
          AL   E+ Q A+ Y NEAWAE + +GI+ + +A A++  A  E V  +GE+ +   ++ L
Sbjct: 12 ALPDQEQKQAALTYLNEAWAEALHDGIDGDCLAQASLFAAFAELVNTYGEDAVAKFVEGL 71

Query: 76 MSRMLAGEFSPERVIQ 91
           +R+ +GEFS     Q
Sbjct: 72 PARVRSGEFSLVTFKQ 87


>gi|254780590|ref|YP_003065003.1| hypothetical protein CLIBASIA_02385 [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040267|gb|ACT57063.1| hypothetical protein CLIBASIA_02385 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 91

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV 60
          MESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV
Sbjct: 1  MESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV 60

Query: 61 RIHGEEKMESLLKSLMSRMLAGEFSPERVIQ 91
          RIHGEEKMESLLKSLMSRMLAGEFSPERVIQ
Sbjct: 61 RIHGEEKMESLLKSLMSRMLAGEFSPERVIQ 91


>gi|225627168|ref|ZP_03785206.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237815124|ref|ZP_04594122.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|225618003|gb|EEH15047.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237789961|gb|EEP64171.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 101

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 60/88 (68%)

Query: 4   IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
           ++S+E    + D ++  EK  VAIEYQNEAWA+GM+EGIEPEI+A AA T A+ E +R  
Sbjct: 14  MKSMEYAPADLDEMIAREKKLVAIEYQNEAWADGMSEGIEPEILAEAAFTTALTELIREV 73

Query: 64  GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
           G++    L++ +  +++AG F   R++Q
Sbjct: 74  GDDCALDLIEKMREQVIAGTFLSRRILQ 101


>gi|85714361|ref|ZP_01045349.1| hypothetical protein NB311A_15457 [Nitrobacter sp. Nb-311A]
 gi|85698808|gb|EAQ36677.1| hypothetical protein NB311A_15457 [Nitrobacter sp. Nb-311A]
          Length = 88

 Score =  100 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 45/88 (51%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          +R     +    +    E+ Q A+ Y NEAWA+   +G++ + +A A++  A  E V  +
Sbjct: 1  MRPPFAFSPARHSFADQEQKQAALSYLNEAWADARHDGVDGDCLAQASLFAAFAELVGTY 60

Query: 64 GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
          GE+ + + ++ L  R+  GEFS     Q
Sbjct: 61 GEDAVATFVEGLAGRIRNGEFSITLAKQ 88


>gi|75676886|ref|YP_319307.1| hypothetical protein Nwi_2702 [Nitrobacter winogradskyi Nb-255]
 gi|74421756|gb|ABA05955.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 88

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 43/77 (55%)

Query: 15 DALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKS 74
          D+    E+ Q A+ Y NEAWA+   +G++ + +A A++  A  E V  +GE+ + + ++ 
Sbjct: 12 DSFADQEQKQAALSYLNEAWADARHDGVDGDCLAQASLFAAFAELVSTYGEDAVATFVEG 71

Query: 75 LMSRMLAGEFSPERVIQ 91
          L  R+  GEFS     Q
Sbjct: 72 LAGRVRNGEFSIALAKQ 88


>gi|306842065|ref|ZP_07474737.1| cytoplasmic protein [Brucella sp. BO2]
 gi|306287815|gb|EFM59238.1| cytoplasmic protein [Brucella sp. BO2]
          Length = 88

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 59/88 (67%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          ++S+E    + D ++  EK  VAIEYQNEAWA+GM+EGIEPEI+A AA T A+ E +R  
Sbjct: 1  MKSMEYAPADLDEMIAREKKLVAIEYQNEAWADGMSEGIEPEILAEAAFTTALTELIREV 60

Query: 64 GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
          G++    L+  +  +++AG F   R++Q
Sbjct: 61 GDDCALDLIDKMREQVIAGTFLSRRILQ 88


>gi|315121783|ref|YP_004062272.1| hypothetical protein CKC_00165 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495185|gb|ADR51784.1| hypothetical protein CKC_00165 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 85

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 71/85 (83%), Positives = 78/85 (91%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E KTQ+ D LLLHEKMQ AIEYQNEAWA GMA+GIEPEIIANAAITQAIRETVR+HGEE
Sbjct: 1  MENKTQDLDTLLLHEKMQAAIEYQNEAWAGGMADGIEPEIIANAAITQAIRETVRLHGEE 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
          K+E L+ SL+SRMLAGEFSPERVIQ
Sbjct: 61 KVELLINSLISRMLAGEFSPERVIQ 85


>gi|23501557|ref|NP_697684.1| hypothetical protein BR0670 [Brucella suis 1330]
 gi|62289630|ref|YP_221423.1| hypothetical protein BruAb1_0687 [Brucella abortus bv. 1 str.
          9-941]
 gi|82699558|ref|YP_414132.1| hypothetical protein BAB1_0690 [Brucella melitensis biovar
          Abortus 2308]
 gi|148558890|ref|YP_001258655.1| hypothetical protein BOV_0663 [Brucella ovis ATCC 25840]
 gi|161618640|ref|YP_001592527.1| hypothetical protein BCAN_A0683 [Brucella canis ATCC 23365]
 gi|163842941|ref|YP_001627345.1| hypothetical protein BSUIS_A0698 [Brucella suis ATCC 23445]
 gi|189023883|ref|YP_001934651.1| hypothetical protein BAbS19_I06460 [Brucella abortus S19]
 gi|225852191|ref|YP_002732424.1| hypothetical protein BMEA_A0707 [Brucella melitensis ATCC 23457]
 gi|254688944|ref|ZP_05152198.1| hypothetical protein Babob68_01911 [Brucella abortus bv. 6 str.
          870]
 gi|254693426|ref|ZP_05155254.1| hypothetical protein Babob3T_01929 [Brucella abortus bv. 3 str.
          Tulya]
 gi|254697079|ref|ZP_05158907.1| hypothetical protein Babob28_05015 [Brucella abortus bv. 2 str.
          86/8/59]
 gi|254701456|ref|ZP_05163284.1| hypothetical protein Bsuib55_11439 [Brucella suis bv. 5 str. 513]
 gi|254704002|ref|ZP_05165830.1| hypothetical protein Bsuib36_08754 [Brucella suis bv. 3 str. 686]
 gi|254707622|ref|ZP_05169450.1| hypothetical protein BpinM_11791 [Brucella pinnipedialis
          M163/99/10]
 gi|254709794|ref|ZP_05171605.1| hypothetical protein BpinB_05891 [Brucella pinnipedialis B2/94]
 gi|254713796|ref|ZP_05175607.1| hypothetical protein BcetM6_10665 [Brucella ceti M644/93/1]
 gi|254717146|ref|ZP_05178957.1| hypothetical protein BcetM_12134 [Brucella ceti M13/05/1]
 gi|254718809|ref|ZP_05180620.1| hypothetical protein Bru83_04593 [Brucella sp. 83/13]
 gi|254729975|ref|ZP_05188553.1| hypothetical protein Babob42_01929 [Brucella abortus bv. 4 str.
          292]
 gi|256031284|ref|ZP_05444898.1| hypothetical protein BpinM2_11643 [Brucella pinnipedialis
          M292/94/1]
 gi|256044365|ref|ZP_05447269.1| hypothetical protein Bmelb1R_07693 [Brucella melitensis bv. 1
          str. Rev.1]
 gi|256060796|ref|ZP_05450958.1| hypothetical protein Bneo5_10595 [Brucella neotomae 5K33]
 gi|256113208|ref|ZP_05454076.1| hypothetical protein Bmelb3E_10867 [Brucella melitensis bv. 3
          str. Ether]
 gi|256159394|ref|ZP_05457176.1| hypothetical protein BcetM4_10618 [Brucella ceti M490/95/1]
 gi|256254692|ref|ZP_05460228.1| hypothetical protein BcetB_10435 [Brucella ceti B1/94]
 gi|256257192|ref|ZP_05462728.1| hypothetical protein Babob9C_07498 [Brucella abortus bv. 9 str.
          C68]
 gi|256264299|ref|ZP_05466831.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
          63/9]
 gi|256369107|ref|YP_003106615.1| hypothetical protein BMI_I668 [Brucella microti CCM 4915]
 gi|260168422|ref|ZP_05755233.1| hypothetical protein BruF5_08648 [Brucella sp. F5/99]
 gi|260545615|ref|ZP_05821356.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260563718|ref|ZP_05834204.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
          16M]
 gi|260566750|ref|ZP_05837220.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261757884|ref|ZP_06001593.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|297248041|ref|ZP_06931759.1| hypothetical protein BAYG_00975 [Brucella abortus bv. 5 str.
          B3196]
 gi|23347468|gb|AAN29599.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62195762|gb|AAX74062.1| conserved hypothetical protein [Brucella abortus bv. 1 str.
          9-941]
 gi|82615659|emb|CAJ10646.1| conserved hypothetical protein [Brucella melitensis biovar
          Abortus 2308]
 gi|148370147|gb|ABQ60126.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|161335451|gb|ABX61756.1| Hypothetical protein BCAN_A0683 [Brucella canis ATCC 23365]
 gi|163673664|gb|ABY37775.1| Hypothetical protein BSUIS_A0698 [Brucella suis ATCC 23445]
 gi|189019455|gb|ACD72177.1| hypothetical protein BAbS19_I06460 [Brucella abortus S19]
 gi|225640556|gb|ACO00470.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255999267|gb|ACU47666.1| hypothetical protein BMI_I668 [Brucella microti CCM 4915]
 gi|260097022|gb|EEW80897.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260153734|gb|EEW88826.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
          16M]
 gi|260156268|gb|EEW91348.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261737868|gb|EEY25864.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|263094572|gb|EEZ18370.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
          63/9]
 gi|297175210|gb|EFH34557.1| hypothetical protein BAYG_00975 [Brucella abortus bv. 5 str.
          B3196]
 gi|326408691|gb|ADZ65756.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326538416|gb|ADZ86631.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 88

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 60/88 (68%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          ++S+E    + D ++  EK  VAIEYQNEAWA+GM+EGIEPEI+A AA T A+ E +R  
Sbjct: 1  MKSMEYAPADLDEMIAREKKLVAIEYQNEAWADGMSEGIEPEILAEAAFTTALTELIREV 60

Query: 64 GEEKMESLLKSLMSRMLAGEFSPERVIQ 91
          G++    L++ +  +++AG F   R++Q
Sbjct: 61 GDDCALDLIEKMREQVIAGTFLSRRILQ 88


>gi|146339096|ref|YP_001204144.1| hypothetical protein BRADO2050 [Bradyrhizobium sp. ORS278]
 gi|146191902|emb|CAL75907.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 75

 Score = 97.0 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 46/75 (61%)

Query: 17 LLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLM 76
          +  HE+ Q A+ Y NEAWAE   +G++ + +A A++  A+ E V  +GE+ + S ++++ 
Sbjct: 1  MPDHEQKQAALSYLNEAWAEARHDGVDGDCLAQASLFAALAELVTTYGEDAVASFVEAMP 60

Query: 77 SRMLAGEFSPERVIQ 91
           R+  GEFS  R  Q
Sbjct: 61 ERVRNGEFSLARATQ 75


>gi|153009943|ref|YP_001371158.1| hypothetical protein Oant_2616 [Ochrobactrum anthropi ATCC 49188]
 gi|151561831|gb|ABS15329.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 85

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 58/85 (68%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + D ++  EK  VAIEY NEAWA+G++EGIEPEI+A AA T A+ E +R  G++
Sbjct: 1  MEHAPADLDEMIAREKKLVAIEYHNEAWADGISEGIEPEILAEAAFTTALTELIREAGDD 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
              L++ +  +++AG F P+R++Q
Sbjct: 61 CALELIEKMREQIVAGTFLPQRILQ 85


>gi|307941567|ref|ZP_07656922.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307775175|gb|EFO34381.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 90

 Score = 94.3 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 48/82 (58%)

Query: 10 KTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME 69
             E +     +  + A+ + ++AWAE +A G++P+ +A+AA+  A+ + V  +GE+ + 
Sbjct: 9  FVTEVEYAEDEDIRRAALGFISDAWAEAVANGVDPDAVAHAAMFTALADLVSTYGEDAVA 68

Query: 70 SLLKSLMSRMLAGEFSPERVIQ 91
           L + L  R+  G+++  RV+Q
Sbjct: 69 KLAEGLPERIARGDYTVNRVLQ 90


>gi|17987562|ref|NP_540196.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
 gi|260754432|ref|ZP_05866780.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260757651|ref|ZP_05869999.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761478|ref|ZP_05873821.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
          86/8/59]
 gi|260883460|ref|ZP_05895074.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261213678|ref|ZP_05927959.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
          Tulya]
 gi|261218961|ref|ZP_05933242.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221871|ref|ZP_05936152.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261315114|ref|ZP_05954311.1| conserved hypothetical protein [Brucella pinnipedialis
          M163/99/10]
 gi|261317330|ref|ZP_05956527.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321540|ref|ZP_05960737.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261324788|ref|ZP_05963985.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261751997|ref|ZP_05995706.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261754656|ref|ZP_05998365.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265983792|ref|ZP_06096527.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|265988368|ref|ZP_06100925.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265990781|ref|ZP_06103338.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
          Rev.1]
 gi|265994617|ref|ZP_06107174.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
          Ether]
 gi|265997835|ref|ZP_06110392.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294852033|ref|ZP_06792706.1| hypothetical protein BAZG_00949 [Brucella sp. NVSL 07-0026]
 gi|306837530|ref|ZP_07470405.1| cytoplasmic protein [Brucella sp. NF 2653]
 gi|306845271|ref|ZP_07477847.1| cytoplasmic protein [Brucella sp. BO1]
 gi|17983266|gb|AAL52460.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str.
          16M]
 gi|260667969|gb|EEX54909.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671910|gb|EEX58731.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
          86/8/59]
 gi|260674540|gb|EEX61361.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872988|gb|EEX80057.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915285|gb|EEX82146.1| conserved hypothetical protein [Brucella abortus bv. 3 str.
          Tulya]
 gi|260920455|gb|EEX87108.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260924050|gb|EEX90618.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294230|gb|EEX97726.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261296553|gb|EEY00050.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261300768|gb|EEY04265.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261304140|gb|EEY07637.1| conserved hypothetical protein [Brucella pinnipedialis
          M163/99/10]
 gi|261741750|gb|EEY29676.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261744409|gb|EEY32335.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262552303|gb|EEZ08293.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|262765730|gb|EEZ11519.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
          Ether]
 gi|263001565|gb|EEZ14140.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
          Rev.1]
 gi|264660565|gb|EEZ30826.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|264662384|gb|EEZ32645.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|294820622|gb|EFG37621.1| hypothetical protein BAZG_00949 [Brucella sp. NVSL 07-0026]
 gi|306274430|gb|EFM56237.1| cytoplasmic protein [Brucella sp. BO1]
 gi|306407422|gb|EFM63626.1| cytoplasmic protein [Brucella sp. NF 2653]
          Length = 85

 Score = 93.6 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 57/85 (67%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + D ++  EK  VAIEYQNEAWA+GM+EGIEPEI+A AA T A+ E +R  G++
Sbjct: 1  MEYAPADLDEMIAREKKLVAIEYQNEAWADGMSEGIEPEILAEAAFTTALTELIREVGDD 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
              L++ +  +++AG F   R++Q
Sbjct: 61 CALDLIEKMREQVIAGTFLSRRILQ 85


>gi|163760576|ref|ZP_02167657.1| hypothetical protein HPDFL43_11796 [Hoeflea phototrophica DFL-43]
 gi|162282191|gb|EDQ32481.1| hypothetical protein HPDFL43_11796 [Hoeflea phototrophica DFL-43]
          Length = 89

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 67/86 (77%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          +     +E D L++ EK+QVA+E Q++AWAE  A+GIEPEIIA+AA+  AIRETVR  GE
Sbjct: 4  TTHHTPEELDELIIQEKLQVALELQHDAWAESTADGIEPEIIADAAMITAIRETVRAMGE 63

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
          ++ E+L+ SL  R+LAGEFSPERV+Q
Sbjct: 64 DQAEALIDSLRERILAGEFSPERVLQ 89


>gi|154251212|ref|YP_001412036.1| hypothetical protein Plav_0756 [Parvibaculum lavamentivorans
          DS-1]
 gi|154155162|gb|ABS62379.1| hypothetical protein Plav_0756 [Parvibaculum lavamentivorans
          DS-1]
          Length = 98

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 13 EFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLL 72
          +   L   E+ +VA++   +AW E + EG+E +++A  AI  A+ + V  +GE+ +  + 
Sbjct: 20 DVSPLTESEQRRVALQNILDAWDEALGEGVEADVLATTAIFAALSDMVEAYGEDAVAEMA 79

Query: 73 KSLMSRMLAGEFSPERVI 90
            L  R+  GEFS  RV+
Sbjct: 80 NGLADRVRQGEFSLNRVL 97


>gi|114704773|ref|ZP_01437681.1| hypothetical protein FP2506_07551 [Fulvimarina pelagi HTCC2506]
 gi|114539558|gb|EAU42678.1| hypothetical protein FP2506_07551 [Fulvimarina pelagi HTCC2506]
          Length = 86

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/86 (44%), Positives = 53/86 (61%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
           +E    E D ++  EK QVA+EY NEAWA+G++EGIE EI+A  A++ A+ E VR+HGE
Sbjct: 1  MLELPKSELDEIIQAEKKQVALEYHNEAWADGISEGIESEILAETALSTAMIELVRLHGE 60

Query: 66 EKMESLLKSLMSRMLAGEFSPERVIQ 91
               +L  L  R+  GEF     +Q
Sbjct: 61 AHAMEMLDDLRRRVEFGEFRANPTLQ 86


>gi|328544941|ref|YP_004305050.1| hypothetical protein SL003B_3324 [polymorphum gilvum SL003B-26A1]
 gi|326414683|gb|ADZ71746.1| hypothetical protein SL003B_3324 [Polymorphum gilvum SL003B-26A1]
          Length = 90

 Score = 89.3 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 45/73 (61%)

Query: 19 LHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSR 78
            +  + A+ + ++AWAE +A G++ + +A+AA+  A+ + V  +GE+ +  L + L  R
Sbjct: 18 DEDIRRAALGFIHDAWAEAIACGVDTDAVAHAAMFTALADLVSTYGEDAVAKLAEGLPER 77

Query: 79 MLAGEFSPERVIQ 91
          +  G++S  RV+Q
Sbjct: 78 IQRGDYSVNRVLQ 90


>gi|222148093|ref|YP_002549050.1| hypothetical protein Avi_1464 [Agrobacterium vitis S4]
 gi|221735081|gb|ACM36044.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 85

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/85 (64%), Positives = 73/85 (85%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E +  E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+RIHGE+
Sbjct: 1  MEPRRNEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIALAMRETIRIHGED 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E++L+SL +RMLAGEFSP+R +Q
Sbjct: 61 GAEAMLESLRARMLAGEFSPKRSVQ 85


>gi|15888397|ref|NP_354078.1| hypothetical protein Atu1055 [Agrobacterium tumefaciens str. C58]
 gi|15156079|gb|AAK86863.1| conserved hypothetical protein [Agrobacterium tumefaciens str.
          C58]
          Length = 85

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 71/85 (83%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          ++    E D +++HEKMQVA+E+QNEAWA+GMA+GIEPEIIA+AAI  A+RET+RIHGE 
Sbjct: 1  MQTSRNEIDDMIVHEKMQVALEHQNEAWADGMADGIEPEIIADAAIALAMRETIRIHGEA 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E++L+SL  RML GEFSP+R+IQ
Sbjct: 61 GAEAMLESLRQRMLQGEFSPQRIIQ 85


>gi|13476465|ref|NP_108035.1| hypothetical protein mll7792 [Mesorhizobium loti MAFF303099]
 gi|14027226|dbj|BAB54180.1| mll7792 [Mesorhizobium loti MAFF303099]
          Length = 96

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 53/85 (62%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + DAL+  EK   A+E  +EAWAEG++ GIEPEIIA AA+  A  E +R +GE 
Sbjct: 12 MEHGVNDIDALVREEKRLTAVESHSEAWAEGLSAGIEPEIIAEAALETAFGEMLRANGET 71

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
             +LL  +  +++AG F PER+  
Sbjct: 72 SALALLDRMREKVIAGAFEPERLRH 96


>gi|227821432|ref|YP_002825402.1| hypothetical protein NGR_c08580 [Sinorhizobium fredii NGR234]
 gi|227340431|gb|ACP24649.1| hypothetical protein NGR_c08580 [Sinorhizobium fredii NGR234]
          Length = 89

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/87 (63%), Positives = 71/87 (81%)

Query: 5  RSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHG 64
          R +E    + D +++HEKMQ A+E+QNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HG
Sbjct: 3  RMMEPSLTDIDDMIVHEKMQAALEHQNEAWADGMADGIEPEIIADAAIALAMRETIRLHG 62

Query: 65 EEKMESLLKSLMSRMLAGEFSPERVIQ 91
          EE  E++L SL  RMLAGEFSP+R IQ
Sbjct: 63 EEGAEAMLNSLRERMLAGEFSPQRSIQ 89


>gi|241203905|ref|YP_002975001.1| hypothetical protein Rleg_1167 [Rhizobium leguminosarum bv.
          trifolii WSM1325]
 gi|240857795|gb|ACS55462.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          trifolii WSM1325]
          Length = 85

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 68/85 (80%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HGE+
Sbjct: 1  MEASLNDIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHALRETIRLHGEK 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E+LL SL  RMLAG+FS  R +Q
Sbjct: 61 SAEALLDSLRERMLAGDFSANRTLQ 85


>gi|163796085|ref|ZP_02190047.1| hypothetical protein BAL199_29942 [alpha proteobacterium BAL199]
 gi|159178544|gb|EDP63084.1| hypothetical protein BAL199_29942 [alpha proteobacterium BAL199]
          Length = 83

 Score = 86.6 bits (213), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 44/71 (61%)

Query: 17 LLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLM 76
          L   E+ ++A++   EAW E +A+G  PEI+A++AI  A+ + + I+GE  +  +++   
Sbjct: 10 LPEDEQKRLALKVVLEAWDEAIAQGASPEIVASSAIFAALTDMIDIYGESTVADMVQDWP 69

Query: 77 SRMLAGEFSPE 87
           R+  GEF+ +
Sbjct: 70 DRIRDGEFTLK 80


>gi|116251293|ref|YP_767131.1| hypothetical protein RL1527 [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115255941|emb|CAK07022.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 85

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/85 (62%), Positives = 68/85 (80%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HGE+
Sbjct: 1  MEASLNDIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHALRETIRLHGEK 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E+LL SL  RMLAGEFS  R +Q
Sbjct: 61 SAEALLDSLRERMLAGEFSANRTLQ 85


>gi|15964859|ref|NP_385212.1| hypothetical protein SMc02556 [Sinorhizobium meliloti 1021]
 gi|150395932|ref|YP_001326399.1| hypothetical protein Smed_0708 [Sinorhizobium medicae WSM419]
 gi|307300930|ref|ZP_07580699.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|307321833|ref|ZP_07601219.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|15074038|emb|CAC45685.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|150027447|gb|ABR59564.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
 gi|306892502|gb|EFN23302.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306903885|gb|EFN34471.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 89

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/87 (65%), Positives = 71/87 (81%)

Query: 5  RSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHG 64
          R +E    + D +++HEKMQ A+E+QNEAWA+GMA+GIEPEIIA+AAI  A+RETVR+HG
Sbjct: 3  RMMEPSLTDIDDMIVHEKMQAALEHQNEAWADGMADGIEPEIIADAAIALAMRETVRLHG 62

Query: 65 EEKMESLLKSLMSRMLAGEFSPERVIQ 91
          EE  E++L SL  RMLAGEFSPER IQ
Sbjct: 63 EEGAEAMLNSLRERMLAGEFSPERTIQ 89


>gi|158422024|ref|YP_001523316.1| hypothetical protein AZC_0400 [Azorhizobium caulinodans ORS 571]
 gi|158328913|dbj|BAF86398.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 104

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 39/69 (56%)

Query: 18 LLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
             ++  VA+ Y  +AW E + +G++ + +  AA+  A+R  V I+GEE     ++SL  
Sbjct: 31 PASDERHVALSYLEDAWTEALRDGLDEDCLVQAALFSALRTLVAIYGEEPTADYVESLAQ 90

Query: 78 RMLAGEFSP 86
          R+  GE++ 
Sbjct: 91 RVRGGEYTL 99


>gi|190891089|ref|YP_001977631.1| hypothetical protein RHECIAT_CH0001474 [Rhizobium etli CIAT 652]
 gi|218459270|ref|ZP_03499361.1| hypothetical protein RetlK5_07210 [Rhizobium etli Kim 5]
 gi|218660455|ref|ZP_03516385.1| hypothetical protein RetlI_12939 [Rhizobium etli IE4771]
 gi|190696368|gb|ACE90453.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
 gi|327191297|gb|EGE58337.1| hypothetical protein RHECNPAF_330021 [Rhizobium etli CNPAF512]
          Length = 85

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 67/85 (78%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HGE 
Sbjct: 1  MEASLNEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHALRETIRLHGES 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E+LL SL  RMLAGEFS  R +Q
Sbjct: 61 SAEALLDSLRDRMLAGEFSANRTLQ 85


>gi|325292434|ref|YP_004278298.1| hypothetical protein AGROH133_05102 [Agrobacterium sp. H13-3]
 gi|325060287|gb|ADY63978.1| hypothetical protein AGROH133_05102 [Agrobacterium sp. H13-3]
          Length = 85

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 71/85 (83%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          ++    E D +++HEKMQVA+E+QNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HGE 
Sbjct: 1  MQTSRNEIDDMIVHEKMQVALEHQNEAWADGMADGIEPEIIADAAIALAMRETIRMHGEA 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E++L+SL  RML GEFSP+RVIQ
Sbjct: 61 GAEAMLESLRQRMLEGEFSPQRVIQ 85


>gi|222085404|ref|YP_002543934.1| hypothetical protein Arad_1611 [Agrobacterium radiobacter K84]
 gi|221722852|gb|ACM26008.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 81

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/80 (70%), Positives = 68/80 (85%)

Query: 12 QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  AIRET+RIHGE+  E+L
Sbjct: 2  NEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHAIRETIRIHGEQGAEAL 61

Query: 72 LKSLMSRMLAGEFSPERVIQ 91
          L+SL  RMLAGEFSP R +Q
Sbjct: 62 LESLRERMLAGEFSPNRTLQ 81


>gi|304392055|ref|ZP_07373997.1| putative cytoplasmic protein [Ahrensia sp. R2A130]
 gi|303296284|gb|EFL90642.1| putative cytoplasmic protein [Ahrensia sp. R2A130]
          Length = 86

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query: 12 QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
          +  DAL+  EK +VA  + +EAW   + EGIEP I+A++AI  A+       GE+ +  L
Sbjct: 7  ENLDALIREEKQRVASHFLHEAWDSALEEGIEPTILADSAIDVALTRLFTEAGEDNVRGL 66

Query: 72 LKSLMSRMLAGEFSPERVIQ 91
          ++SL  R+ +G F   RV+Q
Sbjct: 67 IESLSDRLASGHFDASRVLQ 86


>gi|209548618|ref|YP_002280535.1| hypothetical protein Rleg2_1015 [Rhizobium leguminosarum bv.
          trifolii WSM2304]
 gi|209534374|gb|ACI54309.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 85

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 67/85 (78%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+R+HGE 
Sbjct: 1  MEASLNEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHALRETIRLHGES 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
            E+LL SL  RMLAGEFS  R +Q
Sbjct: 61 SAEALLDSLRERMLAGEFSANRTLQ 85


>gi|220920719|ref|YP_002496020.1| hypothetical protein Mnod_0685 [Methylobacterium nodulans ORS
          2060]
 gi|219945325|gb|ACL55717.1| conserved hypothetical protein [Methylobacterium nodulans ORS
          2060]
          Length = 87

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%)

Query: 16 ALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSL 75
           L   E  + A+ Y +EA+AEG  +GI+ + +A AA+  A +E V+ +GEE      +  
Sbjct: 11 DLSDQEAKRAALTYVSEAFAEGCLDGIDGDCMAQAALFAAFQELVQTYGEEATARYAEGF 70

Query: 76 MSRMLAGEFSPERV 89
            R+ +G ++   V
Sbjct: 71 PDRIRSGAYTVNPV 84


>gi|218680112|ref|ZP_03528009.1| hypothetical protein RetlC8_14950 [Rhizobium etli CIAT 894]
          Length = 95

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/81 (64%), Positives = 64/81 (79%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    E D +++HEKMQ A+EYQNEAWA+GMA+GIE EIIA+AAI  A+RET+R+HGE 
Sbjct: 1  MEASLNEIDDMIVHEKMQAALEYQNEAWADGMADGIETEIIADAAIAHALRETIRLHGES 60

Query: 67 KMESLLKSLMSRMLAGEFSPE 87
            E+LL SL  RMLAGEFSP 
Sbjct: 61 SAEALLDSLRERMLAGEFSPT 81


>gi|260462301|ref|ZP_05810509.1| conserved hypothetical protein [Mesorhizobium opportunistum
          WSM2075]
 gi|319784485|ref|YP_004143961.1| hypothetical protein Mesci_4802 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|259031795|gb|EEW33063.1| conserved hypothetical protein [Mesorhizobium opportunistum
          WSM2075]
 gi|317170373|gb|ADV13911.1| hypothetical protein Mesci_4802 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 85

 Score = 83.9 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 53/85 (62%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +E    + DAL+  EK   A+E  +EAWAEG++ GIEPEIIA AA+  A  E +R +GE 
Sbjct: 1  MEHGVNDIDALVREEKRLTAVESHSEAWAEGLSAGIEPEIIAEAALETAFGEMLRANGET 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
             +LL  +  +++AG F PER+  
Sbjct: 61 SALALLDRMREKVIAGAFEPERLRH 85


>gi|298293970|ref|YP_003695909.1| hypothetical protein Snov_4020 [Starkeya novella DSM 506]
 gi|296930481|gb|ADH91290.1| hypothetical protein Snov_4020 [Starkeya novella DSM 506]
          Length = 90

 Score = 83.9 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 1  MESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV 60
          M  +        + D+ L  E    A+ Y +EAW E + +G++ + +A AA+  AIR  V
Sbjct: 1  MSQLPETHDIDGKTDSALEDE-RHAALAYLDEAWNEAVYDGLDEDCLAQAALFTAIRSMV 59

Query: 61 RIHGEEKMESLLKSLMSRMLAGEFSPERVIQ 91
            +GEE      + L  R+ AGE++     Q
Sbjct: 60 ATYGEEAAAGFAERLAGRIRAGEYTVPFNRQ 90


>gi|154245425|ref|YP_001416383.1| hypothetical protein Xaut_1478 [Xanthobacter autotrophicus Py2]
 gi|154159510|gb|ABS66726.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
          Length = 90

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 1  MESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV 60
          M ++ +      E   +   +    A+ Y N+AW E + EG+E + +  AA+  A+R  V
Sbjct: 1  MSTLPTPAIALPEIADMAADD-RHAALTYLNDAWVEAVREGLEEDCLVQAALFTALRSLV 59

Query: 61 RIHGEEKMESLLKSLMSRMLAGEFSPE 87
            +GE      +  +  R+ AGE++  
Sbjct: 60 ATYGETASAEYMARVAERVAAGEYTVA 86


>gi|170740025|ref|YP_001768680.1| hypothetical protein M446_1756 [Methylobacterium sp. 4-46]
 gi|168194299|gb|ACA16246.1| hypothetical protein M446_1756 [Methylobacterium sp. 4-46]
          Length = 87

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          + + E            E  + A+ Y ++A+AEG  +GI+ + +A AA+  A +E V+ +
Sbjct: 1  MPNFETFLPP--EPSDQEDKRTALTYVSQAFAEGCLDGIDGDCMAQAALFAAFQELVQTY 58

Query: 64 GEEKMESLLKSLMSRMLAGEFSPER 88
          GEE      +    R+  G ++   
Sbjct: 59 GEEATARFAEGFPERIRNGAYTVNP 83


>gi|297181058|gb|ADI17258.1| hypothetical protein [uncultured alpha proteobacterium
          HF0070_14E07]
          Length = 85

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 44/80 (55%)

Query: 12 QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
          +E   L   E+ Q+A+    EAW + +++G+  E++A++AI  A+ + +  +GEE +  +
Sbjct: 3  EEDTPLPEDEQKQLALRIILEAWEDALSQGVSAEMVASSAIFAALTDMIEHYGEEPVAEM 62

Query: 72 LKSLMSRMLAGEFSPERVIQ 91
          +     R+   EF+  +  Q
Sbjct: 63 VAEWPDRIRNSEFTLSQDEQ 82


>gi|300023500|ref|YP_003756111.1| hypothetical protein Hden_1989 [Hyphomicrobium denitrificans ATCC
          51888]
 gi|299525321|gb|ADJ23790.1| hypothetical protein Hden_1989 [Hyphomicrobium denitrificans ATCC
          51888]
          Length = 81

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query: 26 AIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRMLAGEFS 85
          A++    AW EG+  G+EP+ +A AA+  A+ + V I+GE+ +  L + L  R++ GEF+
Sbjct: 16 ALDLILAAWDEGVDTGVEPQQMAYAALFTALTDLVAIYGEDAVIHLTRGLEKRVVEGEFT 75

Query: 86 PERVIQ 91
            R  Q
Sbjct: 76 LTRRDQ 81


>gi|254471795|ref|ZP_05085196.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211958997|gb|EEA94196.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 95

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 10 KTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME 69
           T+E DA    +  ++A+ +  EAW +G++ GI+   +A+AA+  A+ + V ++GEE + 
Sbjct: 15 FTEEIDA-SDADIRRLALSFIQEAWEDGLSHGIDSTALAHAALFSAMMDLVSLYGEEAVS 73

Query: 70 SLLKSLMSRMLAGEFSPERVIQ 91
             + L  R+  G++S ER + 
Sbjct: 74 KFAQELPQRVERGDYSLERRLH 95


>gi|170750383|ref|YP_001756643.1| hypothetical protein Mrad2831_3986 [Methylobacterium
          radiotolerans JCM 2831]
 gi|170656905|gb|ACB25960.1| conserved hypothetical protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 84

 Score = 78.9 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 6  SVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGE 65
          S      E D     E+ +VA+ Y +EA+AEG  +G++ + +A AA+  A +E V  +GE
Sbjct: 4  SSHTAPIEVDV----EEKRVALSYVSEAFAEGCLDGLDGDCMAQAALFAAFQELVTTYGE 59

Query: 66 EKMESLLKSLMSRMLAGEFS 85
          E      +    R+  G F+
Sbjct: 60 EATARYAEGFPERIRGGAFT 79


>gi|254502550|ref|ZP_05114701.1| hypothetical protein SADFL11_2589 [Labrenzia alexandrii DFL-11]
 gi|222438621|gb|EEE45300.1| hypothetical protein SADFL11_2589 [Labrenzia alexandrii DFL-11]
          Length = 90

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 45/71 (63%)

Query: 21 EKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRML 80
          +  + A+ + +EAW+E +A G++ + +A+AA+  A+ + V  +GE+ +  L + L  R+ 
Sbjct: 20 DIRRAALGFISEAWSEAIANGVDADAVAHAAMFTALADLVAAYGEDAVAKLAEGLPDRIQ 79

Query: 81 AGEFSPERVIQ 91
           G+++  RV+Q
Sbjct: 80 RGDYTVNRVLQ 90


>gi|110633315|ref|YP_673523.1| hypothetical protein Meso_0961 [Mesorhizobium sp. BNC1]
 gi|110284299|gb|ABG62358.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 85

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEE 66
          +     + +AL+  EK     E  + AWAEG+  GIEPEIIA AA+  A+ E  +   EE
Sbjct: 1  MHMTVADIEALIEEEKRTTCAECHSAAWAEGLLAGIEPEIIAEAALATALGELGKSGEEE 60

Query: 67 KMESLLKSLMSRMLAGEFSPERVIQ 91
          K+  LL ++  R+L G+F P++   
Sbjct: 61 KLLELLDTMRRRVLLGDFLPQQSRH 85


>gi|188584005|ref|YP_001927450.1| hypothetical protein Mpop_4819 [Methylobacterium populi BJ001]
 gi|179347503|gb|ACB82915.1| conserved hypothetical protein [Methylobacterium populi BJ001]
          Length = 84

 Score = 73.5 bits (179), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 4  IRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIH 63
          I   +    + DA    E  ++A+    EA+AEG  +GI+ + +A AA+  A +E V  +
Sbjct: 2  IHDSDTAPFDVDA----ESKRLALGLVTEAFAEGCLDGIDGDCMAQAALFAAFQELVATY 57

Query: 64 GEEKMESLLKSLMSRMLAGEFS 85
          GE+      +SL  R+  G F+
Sbjct: 58 GEDATARYAESLPERIRGGGFT 79


>gi|118589246|ref|ZP_01546652.1| hypothetical protein SIAM614_06873 [Stappia aggregata IAM 12614]
 gi|118437946|gb|EAV44581.1| hypothetical protein SIAM614_06873 [Stappia aggregata IAM 12614]
          Length = 90

 Score = 73.5 bits (179), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 46/73 (63%)

Query: 19 LHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSR 78
            +  + A+ + ++AWAE +A G++ + +A+AA+  A+ + V  +GE+ +  L + L  R
Sbjct: 18 DEDIRRAALGFISDAWAEAIANGVDADAVAHAAMFTALADLVAAYGEDAVAKLAEGLPDR 77

Query: 79 MLAGEFSPERVIQ 91
          +L G+++  RV+Q
Sbjct: 78 ILQGDYTVNRVLQ 90


>gi|163853698|ref|YP_001641741.1| hypothetical protein Mext_4301 [Methylobacterium extorquens PA1]
 gi|163665303|gb|ABY32670.1| hypothetical protein Mext_4301 [Methylobacterium extorquens PA1]
          Length = 99

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 18 LLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
             E  ++A+    EA+AEG  +GI+ + +A AA+  A +E V  +GE+      ++L  
Sbjct: 27 ADAESKRLALGLVTEAFAEGCLDGIDGDCMAQAALFAAFQELVATYGEDATARYAETLPE 86

Query: 78 RMLAGEFS 85
          R+  G F+
Sbjct: 87 RIRGGGFT 94


>gi|46202743|ref|ZP_00052677.2| hypothetical protein Magn03007144 [Magnetospirillum
          magnetotacticum MS-1]
          Length = 84

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 18 LLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
             E  ++A+    EA+AEG  +GI+ + +A AA+  A +E V  +GE+      ++L  
Sbjct: 12 SDAESKRLALGLVTEAFAEGCLDGIDGDCMAQAALFAAFQELVATYGEDATARYAETLPE 71

Query: 78 RMLAGEFS 85
          R+  G F+
Sbjct: 72 RIRGGGFT 79


>gi|218532556|ref|YP_002423372.1| hypothetical protein Mchl_4670 [Methylobacterium chloromethanicum
          CM4]
 gi|240141123|ref|YP_002965603.1| hypothetical protein MexAM1_META1p4698 [Methylobacterium
          extorquens AM1]
 gi|254563634|ref|YP_003070729.1| hypothetical protein METDI5304 [Methylobacterium extorquens DM4]
 gi|218524859|gb|ACK85444.1| conserved hypothetical protein [Methylobacterium chloromethanicum
          CM4]
 gi|240011100|gb|ACS42326.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
 gi|254270912|emb|CAX26917.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 84

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 18 LLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
             E  ++A+    EA+AEG  +GI+ + +A AA+  A +E V  +GE+      ++L  
Sbjct: 12 ADAESKRLALGLVTEAFAEGCLDGIDGDCMAQAALFAAFQELVATYGEDATARYAETLPE 71

Query: 78 RMLAGEFS 85
          R+  G F+
Sbjct: 72 RIRGGGFT 79


>gi|323135742|ref|ZP_08070825.1| hypothetical protein Met49242DRAFT_0212 [Methylocystis sp. ATCC
          49242]
 gi|322398833|gb|EFY01352.1| hypothetical protein Met49242DRAFT_0212 [Methylocystis sp. ATCC
          49242]
          Length = 84

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 21 EKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRML 80
          E+ + A+ Y  EA+AE +  GIE +  A AA++ A+RE V  +GEE + +  ++L  R+ 
Sbjct: 15 EQHRAALAYVTEAFAEAILAGIESDSFAQAALSAALRELVATYGEEAVATFAEALPGRLR 74

Query: 81 AGEFSPE 87
          AGEF+  
Sbjct: 75 AGEFTLT 81


>gi|296444969|ref|ZP_06886931.1| hypothetical protein MettrDRAFT_0647 [Methylosinus trichosporium
          OB3b]
 gi|296257637|gb|EFH04702.1| hypothetical protein MettrDRAFT_0647 [Methylosinus trichosporium
          OB3b]
          Length = 85

 Score = 68.1 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 14 FDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLK 73
           D    +++ Q A+ Y  EA+AE M  GIE +  A+AA++ A+ E V   GEE++   ++
Sbjct: 9  VDDAGGYDQRQAALSYVAEAFAEAMLAGIESDSFAHAALSAALHELVSTFGEEEVALFVE 68

Query: 74 SLMSRMLAGEFS 85
           L  R+  GEFS
Sbjct: 69 RLPKRLRNGEFS 80


>gi|218515949|ref|ZP_03512789.1| hypothetical protein Retl8_20843 [Rhizobium etli 8C-3]
          Length = 44

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 37/44 (84%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANA 50
          +E    E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+A
Sbjct: 1  MEASLNEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADA 44


>gi|218672350|ref|ZP_03522019.1| hypothetical protein RetlG_12282 [Rhizobium etli GR56]
          Length = 54

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/54 (64%), Positives = 45/54 (83%)

Query: 7  VEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETV 60
          +E    E D +++HEKMQ A+EYQNEAWA+GMA+GIEPEIIA+AAI  A+RET+
Sbjct: 1  MEASLNEIDDMIVHEKMQAALEYQNEAWADGMADGIEPEIIADAAIAHALRETI 54


>gi|260598097|ref|YP_003210668.1| hypothetical protein CTU_23050 [Cronobacter turicensis z3032]
 gi|260217274|emb|CBA31216.1| Uncharacterized protein ycjX [Cronobacter turicensis z3032]
          Length = 479

 Score = 40.8 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 19/52 (36%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRM 79
           +   EAW     EGIE + +  A+I       V  HGE         L   +
Sbjct: 370 QLVQEAWQNAAFEGIEMDCMGIASIQATESGMVESHGESVPALRGNRLSDGV 421


>gi|156933826|ref|YP_001437742.1| hypothetical protein ESA_01652 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532080|gb|ABU76906.1| hypothetical protein ESA_01652 [Cronobacter sakazakii ATCC BAA-894]
          Length = 466

 Score = 40.4 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 18/50 (36%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
           +   EAW     EGIE + +  A+I       V  HGE         L  
Sbjct: 357 QLVQEAWQNAAFEGIEMDCMGIASIQATESGMVESHGESVPALRGNRLSD 406


>gi|262274447|ref|ZP_06052258.1| putative ATPase [Grimontia hollisae CIP 101886]
 gi|262221010|gb|EEY72324.1| putative ATPase [Grimontia hollisae CIP 101886]
          Length = 464

 Score = 38.9 bits (89), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRMLAGE 83
           +  +EAW     EGI+ E I+ A+I       V   GE         L   + +G+
Sbjct: 356 QLIHEAWQTAAFEGIDMECISLASIQATEPGLVNHQGESMAA-----LRGTLESGD 406


>gi|157145644|ref|YP_001452963.1| hypothetical protein CKO_01391 [Citrobacter koseri ATCC BAA-895]
 gi|157082849|gb|ABV12527.1| hypothetical protein CKO_01391 [Citrobacter koseri ATCC BAA-895]
          Length = 467

 Score = 37.7 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME----SLLKSLMSRMLAGE 83
           +   +AW     EGI  + +  A++       + ++GE+        L       +  GE
Sbjct: 358 QLIQDAWQNAAFEGISMDCLGLASVQATTSGLIDVNGEKIPALRGNRLSDGTPLTVYPGE 417


>gi|206581133|ref|YP_002238937.1| hypothetical protein KPK_3111 [Klebsiella pneumoniae 342]
 gi|288935866|ref|YP_003439925.1| hypothetical protein Kvar_3007 [Klebsiella variicola At-22]
 gi|290509900|ref|ZP_06549271.1| hypothetical protein HMPREF0485_01671 [Klebsiella sp. 1_1_55]
 gi|206570191|gb|ACI11967.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
 gi|288890575|gb|ADC58893.1| protein of unknown function DUF463 YcjX family protein [Klebsiella
           variicola At-22]
 gi|289779294|gb|EFD87291.1| hypothetical protein HMPREF0485_01671 [Klebsiella sp. 1_1_55]
          Length = 465

 Score = 36.9 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMS 77
           +   +AW     EGI  + +  A+I       + ++GE+        L  
Sbjct: 356 QLIQDAWQNAAFEGISMDCLGLASIQATQSGLIEVNGEKIPALRGDRLSD 405


>gi|331646650|ref|ZP_08347753.1| hypothetical protein ECIG_01035 [Escherichia coli M605]
 gi|331045402|gb|EGI17529.1| hypothetical protein ECIG_01035 [Escherichia coli M605]
          Length = 489

 Score = 36.6 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME----SLLKSLMSRMLAGE 83
           +   +AW     EGI  + +  A++       + ++GE+        L       +  GE
Sbjct: 380 QLIQDAWQNAAFEGISMDCLGLASVQATTSGMIDVNGEKIPALRGNRLSDGAPLTVYPGE 439


>gi|330911187|gb|EGH39697.1| conserved protein YcjX with nucleoside triphosphate hydrolase
           domain [Escherichia coli AA86]
          Length = 465

 Score = 36.6 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME----SLLKSLMSRMLAGE 83
           +   +AW     EGI  + +  A++       + ++GE+        L       +  GE
Sbjct: 356 QLIQDAWQNAAFEGISMDCLGLASVQATTSGMIDVNGEKIPALRGNRLSDGAPLTVYPGE 415


>gi|281178512|dbj|BAI54842.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 465

 Score = 36.6 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 28  EYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKME----SLLKSLMSRMLAGE 83
           +   +AW     EGI  + +  A++       + ++GE+        L       +  GE
Sbjct: 356 QLIQDAWQNAAFEGISMDCLGLASVQATTSGMIDVNGEKIPALRGNRLSDGAPLTVYPGE 415


>gi|260945417|ref|XP_002617006.1| hypothetical protein CLUG_02450 [Clavispora lusitaniae ATCC 42720]
 gi|238848860|gb|EEQ38324.1| hypothetical protein CLUG_02450 [Clavispora lusitaniae ATCC 42720]
          Length = 285

 Score = 36.2 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 4/71 (5%)

Query: 9   KKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAIT----QAIRETVRIHG 64
                 + L   E  Q AI    E W EG      P+      +      A+R  V   G
Sbjct: 168 TSVSGVNDLEEDENRQEAIRQLEERWLEGTFNDAHPQAGGETGVALPPNAALRAAVESEG 227

Query: 65  EEKMESLLKSL 75
               E LL  L
Sbjct: 228 AHHTEDLLIGL 238


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score = 35.8 bits (81), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 26  AIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRMLAGEFS 85
           A+ Y N+    G A G+EP+++ +  +   IR+       E   +    L   +    F+
Sbjct: 200 ALVYLNQMVENGCARGVEPDVVIHNLV---IRQLCASGNLEDALAYFDELDDSLDLTHFT 256

Query: 86  PERVI 90
              ++
Sbjct: 257 FNPLV 261


>gi|123446839|ref|XP_001312166.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121894004|gb|EAX99236.1| hypothetical protein TVAG_296200 [Trichomonas vaginalis G3]
          Length = 387

 Score = 35.0 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 17 LLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQ---------AIRETVRIHGEEK 67
          LL   +  +  ++      E + +GI+P+I+AN  +            +   V I GE++
Sbjct: 3  LLEAHEKDLLKKWIIAKAKEIITDGIDPQILANYLMNLINRGVQYPEMVSTLVDIIGEDE 62

Query: 68 MESLLKSLMSRMLAGEF 84
             L   L   + +G +
Sbjct: 63 ATLLTDKLRECIESGSY 79


>gi|242050302|ref|XP_002462895.1| hypothetical protein SORBIDRAFT_02g033980 [Sorghum bicolor]
 gi|241926272|gb|EER99416.1| hypothetical protein SORBIDRAFT_02g033980 [Sorghum bicolor]
          Length = 463

 Score = 34.6 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 34  WAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESLLKSLMSRMLAGEFSPE 87
           W E + EGI+P++        A    +  +       + + +   ML GE  P 
Sbjct: 279 WDEMIQEGIQPDV-------TAYNTMIGGYCHSGEVGMAEEMFKNMLMGEIDPS 325


>gi|15826936|ref|NP_301199.1| polyketide synthase [Mycobacterium leprae TN]
 gi|221229414|ref|YP_002502830.1| polyketide synthase [Mycobacterium leprae Br4923]
 gi|13092483|emb|CAC29609.1| polyketide synthase [Mycobacterium leprae]
 gi|219932521|emb|CAR70194.1| polyketide synthase [Mycobacterium leprae Br4923]
          Length = 1784

 Score = 34.6 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E+    +E       +    GIE   +   AI  A+ E ++ HG +    +
Sbjct: 774 EKVDALVQDERGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLKHHGAKPAAVV 830

Query: 72  LKSLMS 77
            +SL  
Sbjct: 831 GQSLGE 836


>gi|298527275|ref|ZP_07014684.1| polyketide synthase pks13 [Mycobacterium tuberculosis 94_M4241A]
 gi|298497069|gb|EFI32363.1| polyketide synthase pks13 [Mycobacterium tuberculosis 94_M4241A]
          Length = 1447

 Score = 34.2 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 456 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 512

Query: 72  LKSLMS 77
            +SL  
Sbjct: 513 GQSLGE 518


>gi|308232575|ref|ZP_07416500.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu001]
 gi|308371460|ref|ZP_07425039.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu003]
 gi|308371507|ref|ZP_07425172.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu004]
 gi|308374991|ref|ZP_07442318.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu007]
 gi|308376239|ref|ZP_07438111.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu008]
 gi|308379625|ref|ZP_07486940.2| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu010]
 gi|308213498|gb|EFO72897.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu001]
 gi|308328654|gb|EFP17505.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu003]
 gi|308336401|gb|EFP25252.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu004]
 gi|308347778|gb|EFP36629.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu007]
 gi|308351714|gb|EFP40565.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu008]
 gi|308356353|gb|EFP45204.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu010]
          Length = 1673

 Score = 34.2 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 682 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 738

Query: 72  LKSLMS 77
            +SL  
Sbjct: 739 GQSLGE 744


>gi|308380818|ref|ZP_07669295.1| putative beta-ketoacyl synthase, N- domain protein [Mycobacterium
           tuberculosis SUMu011]
 gi|308360309|gb|EFP49160.1| putative beta-ketoacyl synthase, N- domain protein [Mycobacterium
           tuberculosis SUMu011]
          Length = 993

 Score = 34.2 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|254233292|ref|ZP_04926618.1| polyketide synthase pks13 [Mycobacterium tuberculosis C]
 gi|124603085|gb|EAY61360.1| polyketide synthase pks13 [Mycobacterium tuberculosis C]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|215448147|ref|ZP_03434899.1| polyketide synthase pks13 [Mycobacterium tuberculosis T85]
 gi|289759967|ref|ZP_06519345.1| polyketide synthase pks13 [Mycobacterium tuberculosis T85]
 gi|294995285|ref|ZP_06800976.1| polyketide synthase pks13 [Mycobacterium tuberculosis 210]
 gi|289715531|gb|EFD79543.1| polyketide synthase pks13 [Mycobacterium tuberculosis T85]
 gi|326905638|gb|EGE52571.1| polyketide synthase pks13 [Mycobacterium tuberculosis W-148]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|15610936|ref|NP_218317.1| polyketide synthase PKS13 [Mycobacterium tuberculosis H37Rv]
 gi|15843422|ref|NP_338459.1| polyketide synthase [Mycobacterium tuberculosis CDC1551]
 gi|148663668|ref|YP_001285191.1| polyketide synthase Pks13 [Mycobacterium tuberculosis H37Ra]
 gi|148825007|ref|YP_001289761.1| polyketide synthase pks13 [Mycobacterium tuberculosis F11]
 gi|215405854|ref|ZP_03418035.1| polyketide synthase pks13 [Mycobacterium tuberculosis 02_1987]
 gi|215432780|ref|ZP_03430699.1| polyketide synthase pks13 [Mycobacterium tuberculosis EAS054]
 gi|218755588|ref|ZP_03534384.1| polyketide synthase pks13 [Mycobacterium tuberculosis GM 1503]
 gi|253800848|ref|YP_003033850.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 1435]
 gi|260198849|ref|ZP_05766340.1| polyketide synthase pks13 [Mycobacterium tuberculosis T46]
 gi|289441237|ref|ZP_06430981.1| polyketide synthase pks13 [Mycobacterium tuberculosis T46]
 gi|289556067|ref|ZP_06445277.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 605]
 gi|289747642|ref|ZP_06507020.1| polyketide synthase pks13 [Mycobacterium tuberculosis 02_1987]
 gi|289755933|ref|ZP_06515311.1| polyketide synthase pks13 [Mycobacterium tuberculosis EAS054]
 gi|289763985|ref|ZP_06523363.1| polyketide synthase pks13 [Mycobacterium tuberculosis GM 1503]
 gi|297636482|ref|ZP_06954262.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 4207]
 gi|297733476|ref|ZP_06962594.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN R506]
 gi|306791402|ref|ZP_07429704.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu005]
 gi|306795468|ref|ZP_07433770.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu006]
 gi|307086600|ref|ZP_07495713.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu012]
 gi|313660807|ref|ZP_07817687.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN V2475]
 gi|2950419|emb|CAA17864.1| POLYKETIDE SYNTHASE PKS13 [Mycobacterium tuberculosis H37Rv]
 gi|13883790|gb|AAK48273.1| polyketide synthase [Mycobacterium tuberculosis CDC1551]
 gi|148507820|gb|ABQ75629.1| polyketide synthase Pks13 [Mycobacterium tuberculosis H37Ra]
 gi|148723534|gb|ABR08159.1| polyketide synthase pks13 [Mycobacterium tuberculosis F11]
 gi|253322352|gb|ACT26955.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 1435]
 gi|289414156|gb|EFD11396.1| polyketide synthase pks13 [Mycobacterium tuberculosis T46]
 gi|289440699|gb|EFD23192.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 605]
 gi|289688170|gb|EFD55658.1| polyketide synthase pks13 [Mycobacterium tuberculosis 02_1987]
 gi|289696520|gb|EFD63949.1| polyketide synthase pks13 [Mycobacterium tuberculosis EAS054]
 gi|289711491|gb|EFD75507.1| polyketide synthase pks13 [Mycobacterium tuberculosis GM 1503]
 gi|308339994|gb|EFP28845.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu005]
 gi|308343993|gb|EFP32844.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu006]
 gi|308363945|gb|EFP52796.1| polyketide synthase pks13 [Mycobacterium tuberculosis SUMu012]
 gi|323717466|gb|EGB26669.1| polyketide synthase pks13 [Mycobacterium tuberculosis CDC1551A]
 gi|328460576|gb|AEB05999.1| polyketide synthase pks13 [Mycobacterium tuberculosis KZN 4207]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|260203005|ref|ZP_05770496.1| polyketide synthase pks13 [Mycobacterium tuberculosis K85]
 gi|289572452|ref|ZP_06452679.1| polyketide synthase pks13 [Mycobacterium tuberculosis K85]
 gi|289536883|gb|EFD41461.1| polyketide synthase pks13 [Mycobacterium tuberculosis K85]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|219559891|ref|ZP_03538967.1| polyketide synthase pks13 [Mycobacterium tuberculosis T17]
          Length = 985

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|121639717|ref|YP_979941.1| polyketide synthase pks13 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224992212|ref|YP_002646902.1| polyketide synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|121495365|emb|CAL73852.1| Polyketide synthase pks13 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224775328|dbj|BAH28134.1| polyketide synthase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|31794974|ref|NP_857467.1| polyketide synthase PKS13 [Mycobacterium bovis AF2122/97]
 gi|260184726|ref|ZP_05762200.1| polyketide synthase pks13 [Mycobacterium tuberculosis CPHL_A]
 gi|289445401|ref|ZP_06435145.1| polyketide synthase pks13 [Mycobacterium tuberculosis CPHL_A]
 gi|31620572|emb|CAD96016.1| POLYKETIDE SYNTHASE PKS13 [Mycobacterium bovis AF2122/97]
 gi|289418359|gb|EFD15560.1| polyketide synthase pks13 [Mycobacterium tuberculosis CPHL_A]
          Length = 1733

 Score = 34.2 bits (77), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 742 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 798

Query: 72  LKSLMS 77
            +SL  
Sbjct: 799 GQSLGE 804


>gi|215425053|ref|ZP_03422972.1| polyketide synthase pks13 [Mycobacterium tuberculosis T92]
 gi|289748326|ref|ZP_06507704.1| polyketide synthase pks13 [Mycobacterium tuberculosis T92]
 gi|289688913|gb|EFD56342.1| polyketide synthase pks13 [Mycobacterium tuberculosis T92]
          Length = 1010

 Score = 34.2 bits (77), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E     +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 240 EKVDALVQDELGYSVLELIL---DDAQDYGIETTQVTIFAIQIALGELLRHHGAKPAAVI 296

Query: 72  LKSLMS 77
            +SL  
Sbjct: 297 GQSLGE 302


>gi|41406318|ref|NP_959154.1| Pks13 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394666|gb|AAS02537.1| Pks13 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 1774

 Score = 33.9 bits (76), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E+    +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 744 EKVDALIQDERGYSVLELIL---DDSHEYGIETSNVVIFAIQIALGELLRHHGAKPAAVV 800

Query: 72  LKSLMS 77
            +SL  
Sbjct: 801 GQSLGE 806


>gi|254773276|ref|ZP_05214792.1| Pks13 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 1774

 Score = 33.9 bits (76), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E+    +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 744 EKVDALIQDERGYSVLELIL---DDSHEYGIETSNVVIFAIQIALGELLRHHGAKPAAVV 800

Query: 72  LKSLMS 77
            +SL  
Sbjct: 801 GQSLGE 806


>gi|118464899|ref|YP_879512.1| polyketide synthase [Mycobacterium avium 104]
 gi|118166186|gb|ABK67083.1| polyketide synthase [Mycobacterium avium 104]
          Length = 1791

 Score = 33.5 bits (75), Expect = 9.7,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 12  QEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQAIRETVRIHGEEKMESL 71
           ++ DAL+  E+    +E       +    GIE   +   AI  A+ E +R HG +    +
Sbjct: 761 EKVDALIQDERGYSVLELIL---DDSHEYGIETSNVVIFAIQIALGELLRHHGAKPAAVV 817

Query: 72  LKSLMS 77
            +SL  
Sbjct: 818 GQSLGE 823


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.303    0.136    0.346 

Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 652,034,125
Number of Sequences: 14124377
Number of extensions: 20664273
Number of successful extensions: 64582
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 64508
Number of HSP's gapped (non-prelim): 100
length of query: 91
length of database: 4,842,793,630
effective HSP length: 61
effective length of query: 30
effective length of database: 3,981,206,633
effective search space: 119436198990
effective search space used: 119436198990
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.2 bits)
S2: 76 (33.8 bits)