RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780590|ref|YP_003065003.1| hypothetical protein
CLIBASIA_02385 [Candidatus Liberibacter asiaticus str. psy62]
         (91 letters)



>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC,
           structural genomics, protein structure initiative; HET:
           PLP; 2.00A {Rhodobacter sphaeroides 2} (A:113-319)
          Length = 207

 Score = 25.2 bits (54), Expect = 3.5
 Identities = 9/49 (18%), Positives = 19/49 (38%)

Query: 2   ESIRSVEKKTQEFDALLLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANA 50
                 +   ++ D L + +++        E +A     G+ P+II  A
Sbjct: 130 GYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFA 178


>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1,
          structural genomics, structural genomics consortium,
          SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A* (A:)
          Length = 295

 Score = 24.6 bits (53), Expect = 4.6
 Identities = 7/50 (14%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 6  SVEKKTQEFDAL-LLHEKMQVAIEYQNEAWAEGMAEGIEPEIIANAAITQ 54
             +   + + L  + +    A+ ++N     G A  +  E I +  + +
Sbjct: 18 KKSRNKLDLETLTDILQHQIRAVPFENLNIHCGDAXDLGLEAIFDQVVRR 67


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.313    0.127    0.333 

Gapped
Lambda     K      H
   0.267   0.0480    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 620,263
Number of extensions: 23188
Number of successful extensions: 60
Number of sequences better than 10.0: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 10
Length of query: 91
Length of database: 4,956,049
Length adjustment: 52
Effective length of query: 39
Effective length of database: 3,198,189
Effective search space: 124729371
Effective search space used: 124729371
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.6 bits)