HHsearch alignment of GI: 254780591 and MMDB domain: 2gag_A_559-631_725-846
>2gag_A (A:559-631,A:725-846) Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A*
Probab=90.68 E-value=0.95 Score=23.04 Aligned_cols=71 Identities=11% Similarity=0.131 Sum_probs=40.5
Q ss_pred EECC-CCEEEEEECCCHHHHHHCCCCC---CHHHCCCCCEEEEEEECCCCCEEEEEEEEEE---CCCCCCEEHHHHHHHH
Q ss_conf 7617-9407999875878786321326---7310899826899999799988998999970---4555200003333345
Q gi|254780591|r 4 VYLS-NQSFIKVCGKSAIPFLQAIITA---DVLTLPYKIARGSAILTPQGKILLYFLISKI---EEDTFILEIDRSKRDS 76 (273)
Q Consensus 4 ~~L~-~~~~i~i~G~DA~~fL~~l~t~---di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~---~~~~~~~~~~~~~~~~ 76 (273)
+=+| ++++|.|.||.|.+.|+.++.. ++..++..++....+ ..|. +++|.|. ++.-|-+..+......
T Consensus 69 ~D~S~~~~~l~i~GP~A~~iL~~l~~~~~~~~~~l~~~~~~~~~i--~~g~---~v~i~R~~~tGE~G~Ei~~p~~~~~~ 143 (195)
T 2gag_A 69 LDATTQLATVAVVGPRSRDVIAKLASTVDVSNEGFKFMAFKDVVL--DSGI---EARISRISFSGELAFEIAVPAWHGLR 143 (195)
T ss_dssp EECTTTEEEEEEESTTHHHHHHHHCTTSCCSTTTSCTTBEEEEEC--TTSC---EEEEECCCSSSSCEEEEEEEGGGHHH
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEE--CCCC---EEEEEEECCCCCCEEEEEECHHHHHH
T ss_conf 853642232025567799999974045666500032011158997--4872---26898604579976999976999999
Q ss_pred HHH
Q ss_conf 677
Q gi|254780591|r 77 LID 79 (273)
Q Consensus 77 ~~~ 79 (273)
...
T Consensus 144 l~~ 146 (195)
T 2gag_A 144 VWE 146 (195)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999