HHsearch alignment of GI: 254780591 and MMDB domain: 2gag_A_559-631_725-846

>2gag_A (A:559-631,A:725-846) Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A*
Probab=90.68  E-value=0.95  Score=23.04  Aligned_cols=71  Identities=11%  Similarity=0.131  Sum_probs=40.5

Q ss_pred             EECC-CCEEEEEECCCHHHHHHCCCCC---CHHHCCCCCEEEEEEECCCCCEEEEEEEEEE---CCCCCCEEHHHHHHHH
Q ss_conf             7617-9407999875878786321326---7310899826899999799988998999970---4555200003333345
Q gi|254780591|r    4 VYLS-NQSFIKVCGKSAIPFLQAIITA---DVLTLPYKIARGSAILTPQGKILLYFLISKI---EEDTFILEIDRSKRDS   76 (273)
Q Consensus         4 ~~L~-~~~~i~i~G~DA~~fL~~l~t~---di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~---~~~~~~~~~~~~~~~~   76 (273)
                      +=+| ++++|.|.||.|.+.|+.++..   ++..++..++....+  ..|.   +++|.|.   ++.-|-+..+......
T Consensus        69 ~D~S~~~~~l~i~GP~A~~iL~~l~~~~~~~~~~l~~~~~~~~~i--~~g~---~v~i~R~~~tGE~G~Ei~~p~~~~~~  143 (195)
T 2gag_A           69 LDATTQLATVAVVGPRSRDVIAKLASTVDVSNEGFKFMAFKDVVL--DSGI---EARISRISFSGELAFEIAVPAWHGLR  143 (195)
T ss_dssp             EECTTTEEEEEEESTTHHHHHHHHCTTSCCSTTTSCTTBEEEEEC--TTSC---EEEEECCCSSSSCEEEEEEEGGGHHH
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEE--CCCC---EEEEEEECCCCCCEEEEEECHHHHHH
T ss_conf             853642232025567799999974045666500032011158997--4872---26898604579976999976999999


Q ss_pred             HHH
Q ss_conf             677
Q gi|254780591|r   77 LID   79 (273)
Q Consensus        77 ~~~   79 (273)
                      ...
T Consensus       144 l~~  146 (195)
T 2gag_A          144 VWE  146 (195)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999