HHsearch alignment of GI: 254780591 and MMDB domain: 2gag_A_847-965
>2gag_A (A:847-965) Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A*
Probab=99.40 E-value=4.7e-13 Score=94.87 Aligned_cols=94 Identities=15% Similarity=0.004 Sum_probs=73.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCE-EEEEEECCCCCC---------CCCCEEEECCEEEEEEEEEECC------EEEEEEE
Q ss_conf 14752133101321001244434-788740134566---------7898872467796799983478------3368998
Q gi|254780591|r 180 LTKGCYIGQEVVSRIQHRNIIRK-RPMIITGTDDLP---------PSGSPILTDDIEIGTLGVVVGK------KALAIAR 243 (273)
Q Consensus 180 ~~k~~f~G~e~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~g~~i~~~g~~VG~vtS~~~~------~gla~i~ 243 (273)
..|+||+|||++.+++..+..++ ++++....+..+ ..+++|+.+++.||+|||+++| +||||++
T Consensus 2 ~kk~dFiGkeal~~~~~~g~~r~~Lvgl~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~vTS~~~Sp~l~~~Iala~i~ 81 (119)
T 2gag_A 2 SKLKDFIGNRSYSRADNAREDRKQLVSVLPVDKSLRLPEGAALVASDALASEGITPMEGWVTSSYDSPNLGRTFGLALIK 81 (119)
T ss_dssp CSSSCCTTGGGGGSHHHHCSSCEEEEEEEESSTTCCCCTTCEEEETTCCCBTTBCCCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECHHCCEEEEEEEEC
T ss_conf 89999677999999986499863999999947876788997467589610378867279995775764339079999999
Q ss_pred HHHCCCCCCCCCEEEECCEEEEEECCCCCC
Q ss_conf 131036656786488688899997488769
Q gi|254780591|r 244 IDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 (273)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~i~~P~w~~ 273 (273)
.++...+....+++..+..+++++.+|||.
T Consensus 82 ~~~~~~G~~v~v~~~g~~~~a~v~~~Pf~d 111 (119)
T 2gag_A 82 NGRNRIGEVLKTPVGDQLVDVVVSETVLYD 111 (119)
T ss_dssp TGGGCTTCEEEEEETTEEEEEEEECSCCSS
T ss_pred CCCCCCCCEEEEEECCEEEEEEEECCCCCC
T ss_conf 433689988999989999999995889998