HHsearch results for GI: 254780591 and protein with PDBid: 1pj5_A

>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00  E-value=7.1e-41  Score=256.40  Aligned_cols=265  Identities=13%  Similarity=0.093  Sum_probs=190.3

Q ss_pred             EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf             76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r    4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF   83 (273)
Q Consensus         4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~   83 (273)
                      +=+|+++.|+|+|+||.+|||+++|||++. .+|+++|++|||++|++++|++|+|++++.|+++.++........+...
T Consensus       503 ~D~S~~~~~~v~G~da~~~L~~~~~~~~~~-~~g~~~y~~~l~~~Ggi~~D~~v~~~~~~~~~l~~~~~~~~~~~~~~~~  581 (830)
T 1pj5_A          503 YDMTPLKRLEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSDITVARLSEDTFQLGANGNIDTAYFERAAR  581 (830)
T ss_dssp             EECTTSCEEEEESTTHHHHHHHHBSSCCCS-CTTBEEEEEEECTTSCEEEEEEEEEEETTEEEEECSSHHHHHHHHHHHH
T ss_pred             EECCCCEEEEEECCCHHHHHHHHHHHCCCC-CCCCEEECCEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHH
T ss_conf             846674348997476899865565303446-7785001110025786524624664023137998332105888887766


Q ss_pred             HHHC-----CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC--------------------------CCHHHHHH-
Q ss_conf             2100-----012235688436999971854322211123456644--------------------------41012221-
Q gi|254780591|r   84 YKLR-----SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--------------------------DVLLHRTW-  131 (273)
Q Consensus        84 ~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~-  131 (273)
                      ....     ..+.+.+.++++..+++|||+|+..+..+...+...                          +++.+.++ 
T Consensus       582 ~~~~~~~~~~~v~i~~~t~~~~~lalqGP~s~~~l~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~g~tGE~G~Ei~~  661 (830)
T 1pj5_A          582 HQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGLKYFRAKNVVIGGIPVTAMRLSYVGELGWELYT  661 (830)
T ss_dssp             HHHHHSCTTCCCEEEECGGGEEEEEEESTTHHHHHTTTCCSCCSTTTSCTTBEEEEEETTEEEEEECCCTTSSSEEEEEE
T ss_pred             HHHHHCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEC
T ss_conf             55541565433113304510557776483799999973023333201554302589999978655216535788537725


Q ss_pred             ----------------CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             ----------------0135555796788888875201334565432212331001112201331475213310132100
Q gi|254780591|r  132 ----------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ  195 (273)
Q Consensus       132 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~  195 (273)
                                      ........+..+.+..+.+.+...+..   +......+....+.+.++++|+||+||+++.+++
T Consensus       662 ~~~~~~~l~~~l~~aG~~~gi~p~G~~a~~~lRlE~G~~~~g~---d~~~~~~P~eagl~~~v~~~k~~FiGk~al~~~~  738 (830)
T 1pj5_A          662 SADNGQRLWDALWQAGQPFGVIAAGRAAFSSLRLEKGYRSWGT---DMTTEHDPFEAGLGFAVKMAKESFIGKGALEGRT  738 (830)
T ss_dssp             EHHHHHHHHHHHHHHHGGGTCEEECHHHHHHHHHHTTCCCBTT---TBCTTSCTTTTTCGGGCCTTSSCCTTHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCC---CCCCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHH
T ss_conf             8899999999999768230998647567667999748875576---6899989789696022279999957899999998


Q ss_pred             CCCCCCEEEEEEECC-CCCCCCCCEEEECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEEC
Q ss_conf             124443478874013-45667898872467796799983478------33689981310366567864886888999974
Q gi|254780591|r  196 HRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF  268 (273)
Q Consensus       196 ~~~~~~~~~~~~~~~-~~~~~~g~~i~~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~  268 (273)
                      ..+..++++++.... +..+..+++|+.+|+.||+|||+++|      +||||++.++. .+....+++..+..+++|++
T Consensus       739 ~~g~~~~lv~l~~~~~~~~~~~~~~i~~~~~~vG~vTS~~~sp~l~~~iala~v~~~~~-~g~~~~v~~~g~~~~a~v~~  817 (830)
T 1pj5_A          739 EEASARRLRCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVAKPIAYSYLPGTVS-VGDSVDIEYFGRRITATVTE  817 (830)
T ss_dssp             STTCSEEEEEEEETTSCCCCCSCCEEEETTEEEEECCSEEEETTTTEEEEEEEEETTCC-TTCEEEEEETTEEEEEEEEC
T ss_pred             HCCCCEEEEEEEECCCCCCCCCCCEEEECCCEEEECCEEEECHHCCCEEEEEEECCCCC-CCCEEEEEECCEEEEEEEEC
T ss_conf             65997399999985898578999848539942899233423241390799999677758-99989999999799999966


Q ss_pred             CCCCC
Q ss_conf             88769
Q gi|254780591|r  269 PHWYK  273 (273)
Q Consensus       269 P~w~~  273 (273)
                      +|||.
T Consensus       818 ~pf~d  822 (830)
T 1pj5_A          818 DPLYD  822 (830)
T ss_dssp             SCSSC
T ss_pred             CCCCC
T ss_conf             79888