HHsearch results for GI: 254780591 and protein with PDBid: 1pj5_A
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=7.1e-41 Score=256.40 Aligned_cols=265 Identities=13% Similarity=0.093 Sum_probs=190.3
Q ss_pred EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF 83 (273)
Q Consensus 4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (273)
+=+|+++.|+|+|+||.+|||+++|||++. .+|+++|++|||++|++++|++|+|++++.|+++.++........+...
T Consensus 503 ~D~S~~~~~~v~G~da~~~L~~~~~~~~~~-~~g~~~y~~~l~~~Ggi~~D~~v~~~~~~~~~l~~~~~~~~~~~~~~~~ 581 (830)
T 1pj5_A 503 YDMTPLKRLEVSGPGALKLLQELTTADLAK-KPGAVTYTLLLDHAGGVRSDITVARLSEDTFQLGANGNIDTAYFERAAR 581 (830)
T ss_dssp EECTTSCEEEEESTTHHHHHHHHBSSCCCS-CTTBEEEEEEECTTSCEEEEEEEEEEETTEEEEECSSHHHHHHHHHHHH
T ss_pred EECCCCEEEEEECCCHHHHHHHHHHHCCCC-CCCCEEECCEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHH
T ss_conf 846674348997476899865565303446-7785001110025786524624664023137998332105888887766
Q ss_pred HHHC-----CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC--------------------------CCHHHHHH-
Q ss_conf 2100-----012235688436999971854322211123456644--------------------------41012221-
Q gi|254780591|r 84 YKLR-----SNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIA--------------------------DVLLHRTW- 131 (273)
Q Consensus 84 ~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~- 131 (273)
.... ..+.+.+.++++..+++|||+|+..+..+...+... +++.+.++
T Consensus 582 ~~~~~~~~~~~v~i~~~t~~~~~lalqGP~s~~~l~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~g~tGE~G~Ei~~ 661 (830)
T 1pj5_A 582 HQTQSGSATDWVQVRDTTGGTCCIGLWGPLARDLVSKVSDDDFTNDGLKYFRAKNVVIGGIPVTAMRLSYVGELGWELYT 661 (830)
T ss_dssp HHHHHSCTTCCCEEEECGGGEEEEEEESTTHHHHHTTTCCSCCSTTTSCTTBEEEEEETTEEEEEECCCTTSSSEEEEEE
T ss_pred HHHHHCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEC
T ss_conf 55541565433113304510557776483799999973023333201554302589999978655216535788537725
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf ----------------0135555796788888875201334565432212331001112201331475213310132100
Q gi|254780591|r 132 ----------------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQ 195 (273)
Q Consensus 132 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~ 195 (273)
........+..+.+..+.+.+...+.. +......+....+.+.++++|+||+||+++.+++
T Consensus 662 ~~~~~~~l~~~l~~aG~~~gi~p~G~~a~~~lRlE~G~~~~g~---d~~~~~~P~eagl~~~v~~~k~~FiGk~al~~~~ 738 (830)
T 1pj5_A 662 SADNGQRLWDALWQAGQPFGVIAAGRAAFSSLRLEKGYRSWGT---DMTTEHDPFEAGLGFAVKMAKESFIGKGALEGRT 738 (830)
T ss_dssp EHHHHHHHHHHHHHHHGGGTCEEECHHHHHHHHHHTTCCCBTT---TBCTTSCTTTTTCGGGCCTTSSCCTTHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCC---CCCCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHH
T ss_conf 8899999999999768230998647567667999748875576---6899989789696022279999957899999998
Q ss_pred CCCCCCEEEEEEECC-CCCCCCCCEEEECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEEC
Q ss_conf 124443478874013-45667898872467796799983478------33689981310366567864886888999974
Q gi|254780591|r 196 HRNIIRKRPMIITGT-DDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASF 268 (273)
Q Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~g~~i~~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~ 268 (273)
..+..++++++.... +..+..+++|+.+|+.||+|||+++| +||||++.++. .+....+++..+..+++|++
T Consensus 739 ~~g~~~~lv~l~~~~~~~~~~~~~~i~~~~~~vG~vTS~~~sp~l~~~iala~v~~~~~-~g~~~~v~~~g~~~~a~v~~ 817 (830)
T 1pj5_A 739 EEASARRLRCLTIDDGRSIVLGKEPVFYKEQAVGYVTSAAYGYTVAKPIAYSYLPGTVS-VGDSVDIEYFGRRITATVTE 817 (830)
T ss_dssp STTCSEEEEEEEETTSCCCCCSCCEEEETTEEEEECCSEEEETTTTEEEEEEEEETTCC-TTCEEEEEETTEEEEEEEEC
T ss_pred HCCCCEEEEEEEECCCCCCCCCCCEEEECCCEEEECCEEEECHHCCCEEEEEEECCCCC-CCCEEEEEECCEEEEEEEEC
T ss_conf 65997399999985898578999848539942899233423241390799999677758-99989999999799999966
Q ss_pred CCCCC
Q ss_conf 88769
Q gi|254780591|r 269 PHWYK 273 (273)
Q Consensus 269 P~w~~ 273 (273)
+|||.
T Consensus 818 ~pf~d 822 (830)
T 1pj5_A 818 DPLYD 822 (830)
T ss_dssp SCSSC
T ss_pred CCCCC
T ss_conf 79888