HHsearch results for GI: 254780591 and protein with PDBid: 1vly_A
>1vly_A SPOT PR51, unknown protein from 2D-PAGE; 1789265, B2898, unknown protein from 2D-PAGE (SPOT PR51), structural genomics, JCSG; HET: MSE; 1.30A {Escherichia coli} SCOP: b.44.2.1 d.250.1.1 PDB: 1nrk_A
Probab=100.00 E-value=1.1e-40 Score=255.39 Aligned_cols=265 Identities=16% Similarity=0.176 Sum_probs=186.0
Q ss_pred EEECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHH
Q ss_conf 17617940799987587878632132673108998268999997999889989999704555200003333345677764
Q gi|254780591|r 3 SVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLL 82 (273)
Q Consensus 3 ~~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (273)
.+-|++|++|+|+|+||.+|||+|+||||+++++|+++||++||++|+|++|++|+|.+++.++++..+........+.+
T Consensus 33 l~~L~~~~~i~v~G~Da~~fLq~l~T~di~~l~~g~~~yt~~ln~~Grvi~d~~v~~~~d~~~l~~~~~~~~~~~~~l~~ 112 (338)
T 1vly_A 33 LMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKK 112 (338)
T ss_dssp EEECTTEEEEEEESTTHHHHHHTTBSSCGGGCCTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHT
T ss_pred EEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCEEEEECHHHHHHHHHHHHH
T ss_conf 88769836999988999999615554162437999899989988993499999999937965998446777888888877
Q ss_pred HHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH-----------------HHH----------HH--CC
Q ss_conf 32100012235688436999971854322211123456644410-----------------122----------21--01
Q gi|254780591|r 83 FYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVL-----------------LHR----------TW--GH 133 (273)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~----------~~--~~ 133 (273)
+. ...++.+.+. .....+.++||+++................ ... .+ ..
T Consensus 113 ~~-~~~~V~i~~~-~~~~~~~l~Gp~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 190 (338)
T 1vly_A 113 YA-VFSKVTIAPD-DERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLR 190 (338)
T ss_dssp TC-SSSSCEEEEE-CSSEEEEEESTTHHHHHHTTSSCCCBTTBCEEEETTEEEEEECSSSCEEEEEECHHHHHHHHHHHB
T ss_pred HC-CCCEEEEECC-CCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 33-4753676214-435799961731799997614345544542540485489953688875365078899999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE-ECCCC
Q ss_conf 35555796788888875201334565432212331001112201331475213310132100124443478874-01345
Q gi|254780591|r 134 NEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMII-TGTDD 212 (273)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~~~~~~~~~~~~~-~~~~~ 212 (273)
......+...|+..+.+.+.+........ ...+........+.++++||||+|||+++|++++|..+|+++.. ...+.
T Consensus 191 ~~~~~~g~~~~~~~Rie~g~p~~~~d~~~-~~~P~e~~l~~~~~Vs~~KGcYiGQE~vaR~~~~G~~krrl~~l~~~~~~ 269 (338)
T 1vly_A 191 GEAELNNSQQWLALNIEAGFPVIDAANSG-QFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASR 269 (338)
T ss_dssp TTBEEECHHHHHHHHHHHTCCCCCGGGTT-SCCGGGGTGGGTTCCCSSSCCCTTHHHHHHTTSTTSCCEEEEEEEECCSS
T ss_pred HCCCCCHHHHHHHHHHHHCCCCCCCCCCC-CCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC
T ss_conf 21332105678899998363113643466-77840268201027557777604599999999739982699999976887
Q ss_pred CCCCCCEEEE----CCEEEEEEEEEEC----CEEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCC
Q ss_conf 6678988724----6779679998347----8336899813103665678648868889999748876
Q gi|254780591|r 213 LPPSGSPILT----DDIEIGTLGVVVG----KKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 (273)
Q Consensus 213 ~~~~g~~i~~----~g~~VG~vtS~~~----~~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~ 272 (273)
.+..|++++. +|+.||.|||+++ .+++|+++.+....+. .+.+..++.+++|...|++
T Consensus 270 ~~~~G~~l~~~~~~~g~~VG~VtS~~~~~~~~~~la~v~~~~~~~g~--~l~v~~~~~~l~i~~lPy~ 335 (338)
T 1vly_A 270 LPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDS--IFRVRDDANTLHIEPLPYS 335 (338)
T ss_dssp CCCTTCCEEEEETTEEEEECEEEEEEECTTSCEEEEEEEETTCCTTC--CEESTTCSSCEEEECCSSC
T ss_pred CCCCCCEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEHHCCCCCC--EEEECCCCCEEEEECCCCC
T ss_conf 89995988861388992799999976889987999999820179998--8997389968999779988