HHSEARCH alignment of GI: 254780591 and SCOP domain: d1vlya2

Alignment
>d1vlya2 d.250.1.1 (A:3-243) Hypothetical protein YgfZ, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.97  E-value=2.8e-31  Score=199.01  Aligned_cols=195  Identities=19%  Similarity=0.229  Sum_probs=133.4

Q ss_pred             CEEECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHH
Q ss_conf             41761794079998758787863213267310899826899999799988998999970455520000333334567776
Q gi|254780591|r    2 SSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKL   81 (273)
Q Consensus         2 ~~~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~   81 (273)
                      ..+-|++|++|+|+|+||.+|||+|+||||++|++|+++||+|||++|||++|++|+|.+++.++++..+... ....++
T Consensus        18 ~l~~L~~~~~i~v~G~Da~~fLq~l~T~di~~l~~g~~~~t~~ln~kGri~~d~~i~~~~~~~~l~~~~~~~~-~~~~~l   96 (241)
T d1vlya2          18 TLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVRE-PQLTEL   96 (241)
T ss_dssp             EEEECTTEEEEEEESTTHHHHHHTTBSSCGGGCCTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEHHHHH-HHHHHH
T ss_pred             EEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEHHHHHHH-HHHHHH
T ss_conf             6997798569999888999997377642610169997873310156675999877752233202111134568-888877


Q ss_pred             HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH-----------------HH------------HHC
Q ss_conf             4321000122356884369999718543222111234566444101-----------------22------------210
Q gi|254780591|r   82 LFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERFSIADVLL-----------------HR------------TWG  132 (273)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----------------~~------------~~~  132 (273)
                      .......++.+.+ ++.+..+.++||.++.................                 ..            ...
T Consensus        97 ~~~~~~~~v~i~~-~~~~~~~~l~gp~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (241)
T d1vlya2          97 KKYAVFSKVTIAP-DDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKL  175 (241)
T ss_dssp             HTTCSSSSCEEEE-ECSSEEEEEESTTHHHHHHTTSSCCCBTTBCEEEETTEEEEEECSSSCEEEEEECHHHHHHHHHHH
T ss_pred             HHHCCCCEEEEEC-CHHHEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCHHHHHHHHHHH
T ss_conf             6530252146511-300103431273079999861544344344212110146530367876345307788999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             1355557967888888752013345654322123310011122013314752133101321001244
Q gi|254780591|r  133 HNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNI  199 (273)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~~~~~  199 (273)
                      .......+...|+..+.+.+.+....... ....+.........+++++||||+|||.++|++++|.
T Consensus       176 ~~~~~~~~~~~~~~lRie~g~p~~~~e~~-~~~~P~E~gLd~~~~Vsf~KGCY~GQE~vAR~~~rG~  241 (241)
T d1vlya2         176 RGEAELNNSQQWLALNIEAGFPVIDAANS-GQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGA  241 (241)
T ss_dssp             BTTBEEECHHHHHHHHHHHTCCCCCGGGT-TSCCGGGGTGGGTTCCCSSSCCCTTHHHHHHTTSTTS
T ss_pred             HHHCCCCCHHHHHHHHHHCCCCCCCCCCC-CCCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf             42112466668999999809862385577-8774888296002699989999675999999985299


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Folate-binding domain
superfamily: Folate-binding domain
family: Aminomethyltransferase folate-binding domain
domain: Hypothetical protein YgfZ, N-terminal domain
species: Escherichia coli [TaxId: 562]