HHSEARCH alignment of GI: 254780591 and SCOP domain: d1wosa2

Alignment
>d1wosa2 d.250.1.1 (A:1-278) Glycine cleavage system T protein, GcvT {Thermotoga maritima [TaxId: 2336]}
Probab=99.94  E-value=3.9e-27  Score=174.82  Aligned_cols=190  Identities=13%  Similarity=0.113  Sum_probs=140.5

Q ss_pred             EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf             76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r    4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF   83 (273)
Q Consensus         4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~   83 (273)
                      +=+|++++|+|+||||.+|||+++|||++++++|++.||++||++|+|++|++|+|.+++.|+++.++........+++.
T Consensus        46 ~D~S~~~~i~v~G~Da~~~L~~~~t~di~~l~~g~~~~t~~l~~~G~i~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (278)
T d1wosa2          46 FDVSHMGEFLVKGPEAVSFIDFLITNDFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKS  125 (278)
T ss_dssp             EECTTSEEEEEESTTHHHHHHHHBSSCCTTCCTTEEEEEEEECTTSCEEEEEEEEEEETTEEEEEECGGGHHHHHHHHHT
T ss_pred             EECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCCHHHHHHHHHC
T ss_conf             96787689999757067654210232224567642134430376763377410232220000013553205554443210


Q ss_pred             HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC------------------------CCCCCHHHHHH--------
Q ss_conf             2100012235688436999971854322211123456------------------------64441012221--------
Q gi|254780591|r   84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF------------------------SIADVLLHRTW--------  131 (273)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------------------~~~~~~~~~~~--------  131 (273)
                      ......+.+.+.+.+++.++++||+|+..........                        ...++..+.++        
T Consensus       126 ~~~~~~v~i~d~t~~~~~l~vqGP~S~~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~tGe~G~ei~~~~~~~~~  205 (278)
T d1wosa2         126 HSKNFDVEVSNISDTTALIAFQGPKAQETLQELVEDGLEEIAYYSFRKSIVAGVETLVSRTGYTGEDGFELMLEAKNAPK  205 (278)
T ss_dssp             TCTTSSCEEEECGGGEEEEEEESTTHHHHHGGGBSSCSTTSCTTBEEEEEETTEEEEEESCCSSSSSEEEEEEEGGGHHH
T ss_pred             CCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEECCHHHHHH
T ss_conf             33334664134034312357324478888775266411111112100013068630475047778886134010456799


Q ss_pred             ---------CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             ---------013555579678888887520133456543221233100111220133147521331013210012
Q gi|254780591|r  132 ---------GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHR  197 (273)
Q Consensus       132 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~~~  197 (273)
                               ......+.+..+++..+.+.+.+.+..+...   ...+......+.++++|+ |+|||++++++.+
T Consensus       206 l~~~l~~~g~~~g~~~~G~~a~~~lRiE~g~~~~g~d~~~---~~~P~E~gl~~~v~~~k~-FiGkeal~~~k~~  276 (278)
T d1wosa2         206 VWDALMNLLRKIDGRPAGLGARDVCRLEATYLLYGQDMDE---NTNPFEVGLSWVVKLNKD-FVGKEALLKAKEK  276 (278)
T ss_dssp             HHHHHHHHHHHHTCEECCHHHHHHHHHHTTCCCBTTTBCT---TSCGGGGTCGGGCCTTSC-CTTHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC---CCCHHHCCCCCCCCCCCC-CCHHHHHHHHHHH
T ss_conf             9999873153112566763167899997266657775899---989888897200189988-1719999998742


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Folate-binding domain
superfamily: Folate-binding domain
family: Aminomethyltransferase folate-binding domain
domain: Glycine cleavage system T protein, GcvT
species: Thermotoga maritima [TaxId: 2336]