HHsearch alignment for GI: 254780592 and conserved domain: COG3107
>COG3107 LppC Putative lipoprotein [General function prediction only].
Probab=97.75 E-value=0.0021 Score=38.57 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHCCHHHHHHHH
Q ss_conf 9999999999985403685433117999999842019999999999999575787999999-999987410012446665
Q gi|254780592|r 16 KCIVFLIPLLLFSSCHLNPRISIPDPESLENMNHEQLLEVTSTIGLQYQSHTKNKMIGIVY-ADVLRRVGRTAQALAVMR 94 (271)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~-a~~l~~~g~~~~A~~~~~ 94 (271)
T Consensus 13 r~l~~illa~vla~C~t~~~~~~~~-----~lq~~a~a~s~~yl~qa~qs~~~~~~~~~llAa~al~~e~k~~qA~~Ll~ 87 (604)
T COG3107 13 RLLTPILLALVLAGCSTFLPSGSVV-----LLQGTANASSQFYLQQAQQSSGEQQNDWLLLAARALVEEGKTAQAQALLN 87 (604)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHH-----HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 0038999999997604678998601-----11678211199999997633701566499999999997478288999998
Q ss_pred HHH-HCCCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-CH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 566-327521-0013555532100000112588764221100-00--233566999999974211111
Q gi|254780592|r 95 QVA-ILYPED-QEVLAAYGKSLANAGYLDEGLDAINRAQRPD-IP--DWQLISAKGSVLAQMGKHSEA 157 (271)
Q Consensus 95 ~al-~~~p~~-~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~-p~--~~~~~~~lg~~~~~~~~~~~A 157 (271)
T Consensus 88 ql~~~Ltd~Q~~~~~LL~ael~la~~q~~~Al~~L~~~~~~~ls~~Qq~Ry~q~~a~a~ea~~~~~~a 155 (604)
T COG3107 88 QLPQELTDAQRAEKSLLAAELALAQKQPAAALQQLAKLLPADLSQNQQARYYQARADALEARGDSIDA 155 (604)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 65623798999999999999998422729999998520321167788999999999998613215899