HHsearch alignment for GI: 254780592 and conserved domain: COG3898
>COG3898 Uncharacterized membrane-bound protein [Function unknown].
Probab=98.23 E-value=0.00034 Score=43.33 Aligned_cols=157 Identities=13% Similarity=0.067 Sum_probs=91.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHH
Q ss_conf 98420199999999999995757879999-99999987410012446665566327521001355553210000011258
Q gi|254780592|r 46 NMNHEQLLEVTSTIGLQYQSHTKNKMIGI-VYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGL 124 (271)
Q Consensus 46 ~~~~~~~~~A~~~~~~al~~~P~~~~~~~-~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~ 124 (271)
T Consensus 130 al~eG~~~~Ar~kfeAMl-~dPEtRllGLRgLyleAqr~GareaAr~yAe~Aa~~Ap~l~WA~~AtLe~r~~~gdWd~Al 208 (531)
T COG3898 130 ALLEGDYEDARKKFEAML-DDPETRLLGLRGLYLEAQRLGAREAARHYAERAAEKAPQLPWAARATLEARCAAGDWDGAL 208 (531)
T ss_pred HHHCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
T ss_conf 886476187999999873-6838877767889999986021899999999987636677167999999998667868899
Q ss_pred HHHHHHHHH---HCHHHH---HHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 876422110---000233---56699999-99742111110000000000000001245777654332235543599999
Q gi|254780592|r 125 DAINRAQRP---DIPDWQ---LISAKGSV-LAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRF 197 (271)
Q Consensus 125 ~~~~~a~~~---~p~~~~---~~~~lg~~-~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 197 (271)
T Consensus 209 kLvd~~~~~~vie~~~aeR~rAvLLtAkA~s~ldadp~~Ar~~A~~a~KL~pdlvPaav~AAralf~d~~~rKg~~ilE~ 288 (531)
T COG3898 209 KLVDAQRAAKVIEKDVAERSRAVLLTAKAMSLLDADPASARDDALEANKLAPDLVPAAVVAARALFRDGNLRKGSKILET 288 (531)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99998888775261167789899998888877248867788999987503876336999999998742462433248899
Q ss_pred HHHCCC
Q ss_conf 995389
Q gi|254780592|r 198 ASQMIG 203 (271)
Q Consensus 198 al~~~p 203 (271)
T Consensus 289 aWK~eP 294 (531)
T COG3898 289 AWKAEP 294 (531)
T ss_pred HHHCCC
T ss_conf 873499