HHsearch alignment for GI: 254780592 and conserved domain: COG4235
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.25 E-value=1.6e-10 Score=82.13 Aligned_cols=129 Identities=21% Similarity=0.183 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Q ss_conf 11258876422110000233566999999974211111000000000000000124577765433223---554359999
Q gi|254780592|r 120 LDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGD---LKTAEEKLR 196 (271)
Q Consensus 120 ~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~A~~~~~ 196 (271)
T Consensus 138 ~~~l~a~Le~~L~~nP~d~egW~~Lg~~ym~~~~~~~A~~AY~~A~rL~g~n~~~~~g~aeaL~~~a~~~~ta~a~~ll~ 217 (287)
T COG4235 138 MEALIARLETHLQQNPGDAEGWDLLGRAYMALGRASDALLAYRNALRLAGDNPEILLGLAEALYYQAGQQMTAKARALLR 217 (287)
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 99999999999984988724499999999984443479999999987379988999999999999538844499999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHH
Q ss_conf 999538985478889999999869989999999986291728665-9999999
Q gi|254780592|r 197 FASQMIGADSRIRQNLALVVGLQGRMKEAYSIASQELSPEEATRN-IKYIKSI 248 (271)
Q Consensus 197 ~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~~~L~~~~~~~~-~~~l~~~ 248 (271)
T Consensus 218 ~al~~D~~~iral~lLA~~afe~g~~~~A~~~Wq~lL~~lp~~~~rr~~ie~~ 270 (287)
T COG4235 218 QALALDPANIRALSLLAFAAFEQGDYAEAAAAWQMLLDLLPADDPRRSLIERS 270 (287)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99843973288999999999981459999999999985189998237899999