HHsearch alignment for GI: 254780592 and conserved domain: KOG1839

Probab=96.44  E-value=0.047  Score=30.22  Aligned_cols=102  Identities=18%  Similarity=0.128  Sum_probs=47.4

Q ss_pred             HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
Q ss_conf             00002335669999999742111110000000000--------0000012457776543322355435999999953---
Q gi|254780592|r  133 PDIPDWQLISAKGSVLAQMGKHSEALIEYERALEL--------SPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQM---  201 (271)
Q Consensus       133 ~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~---  201 (271)
T Consensus       968 ~h~~~~~~~~~La~l~~~~~d~~~Ai~~~~ka~ii~eR~~g~ds~~t~~~y~nlal~~f~~~~~~~al~~~~ra~~l~~L 1047 (1236)
T KOG1839         968 LHPEVASKYRSLAKLSNRLGDNQEAIAQQRKACIISERVLGKDSPNTKLAYGNLALYEFAVKNLSGALKSLNRALKLKLL 1047 (1236)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf             05568899999998876533358899840121554001116798788877667899987415755114668888986303


Q ss_pred             -----CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf             -----898547888999999986998999999998629
Q gi|254780592|r  202 -----IGADSRIRQNLALVVGLQGRMKEAYSIASQELS  234 (271)
Q Consensus       202 -----~p~~~~~~~~La~~~~~~g~~~eA~~~~~~~L~  234 (271)
T Consensus      1048 s~ge~hP~~a~~~~nle~l~~~v~e~d~al~~le~A~a 1085 (1236)
T KOG1839        1048 SSGEDHPPTALSFINLELLLLGVEEADTALRYLESALA 1085 (1236)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             45788996223264799998558888778999999998