HHsearch alignment for GI: 254780592 and conserved domain: PRK04841

Probab=97.63  E-value=0.004  Score=36.78  Aligned_cols=84  Identities=20%  Similarity=0.201  Sum_probs=37.0

Q ss_pred             HHHCCHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC------HHHHHHHHHHH
Q ss_conf             8420199999999999995757879-----999999999874100124466655663275210------01355553210
Q gi|254780592|r   47 MNHEQLLEVTSTIGLQYQSHTKNKM-----IGIVYADVLRRVGRTAQALAVMRQVAILYPEDQ------EVLAAYGKSLA  115 (271)
Q Consensus        47 ~~~~~~~~A~~~~~~al~~~P~~~~-----~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~------~~~~~~~~~~~  115 (271)
T Consensus       463 ~~~~~~~~a~~~a~~al~~l~~~~~~~~~~~~~~l~~~~~~~G~l~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~a~i~~  542 (903)
T PRK04841        463 INDGDPEEAERLAKLALAELPLTWYYSRIVATSVLGEVHHCKGELARALAMMQQTEQMARQHDVYHYALWSLLQQSEILF  542 (903)
T ss_pred             HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             85899999999999997536763479899999999999997799999999999999999983853579999999999999


Q ss_pred             HHCCHHHHHHHHHHH
Q ss_conf             000011258876422
Q gi|254780592|r  116 NAGYLDEGLDAINRA  130 (271)
Q Consensus       116 ~~g~~~~A~~~~~~a  130 (271)
T Consensus       543 ~~G~l~~A~~~~~~a  557 (903)
T PRK04841        543 AQGFLQAAYETQEKA  557 (903)
T ss_pred             HCCCHHHHHHHHHHH
T ss_conf             787899999999999