HHsearch alignment for GI: 254780592 and conserved domain: PRK11189
>PRK11189 lipoprotein NlpI; Provisional.
Probab=99.61 E-value=2.2e-14 Score=105.87 Aligned_cols=177 Identities=15% Similarity=0.007 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999995757879999999999874100124466655663275210013555532100000112588764221100
Q gi|254780592|r 55 VTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAINRAQRPD 134 (271)
Q Consensus 55 A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~ 134 (271)
T Consensus 84 AR~DF~qAL~l~P~~adayN~LGiy~tq~~~fD~AyEAFDs~LEL~P~y~YA~lNRGIAlYYg~R~~LA~~D~~~fy~~d 163 (297)
T PRK11189 84 ARNDFSQALALRPDMADAYNYLGIYLTQEGEFDAAYEAFDSVLELDPTYDYAYLNRGIALYYGGRYDLAQDDLLAFYQDD 163 (297)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf 98649989753998589999999999997119999999877772698734899830278874463788999999999609
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------H
Q ss_conf 002335669999999742111110000000000-00000124577765433223554359999999538985-------4
Q gi|254780592|r 135 IPDWQLISAKGSVLAQMGKHSEALIEYERALEL-SPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGAD-------S 206 (271)
Q Consensus 135 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-------~ 206 (271)
T Consensus 164 p~DpYR~LWLYl~e~-~~d~~~A~~~L~~r~~~~~~~~W--~~~iV~~y--lg~ise-~~~~~~~~~~~~~n~~lAErLc 237 (297)
T PRK11189 164 PNDPYRALWLYLIEQ-KLDPKQAKENLKQRYEKLDKEQW--GWNIVDFY--LGKISE-EQLFERLKAGATDNTELAERLC 237 (297)
T ss_pred CCCCHHHHHHHHHHC-CCCHHHHHHHHHHHHHHCCCHHH--HHHHHHHH--HCCCCH-HHHHHHHHHHCCCCHHHHHHHH
T ss_conf 998279999999981-16999999999999983571226--89999999--458999-9999999872737099999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 7888999999986998999999998629172
Q gi|254780592|r 207 RIRQNLALVVGLQGRMKEAYSIASQELSPEE 237 (271)
Q Consensus 207 ~~~~~La~~~~~~g~~~eA~~~~~~~L~~~~ 237 (271)
T Consensus 238 EaYFYLaK~~~~~G~~~~A~~~fKLAla~NV 268 (297)
T PRK11189 238 ETYFYLAKYYLSLGDLDEAANLFKLALANNV 268 (297)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
T ss_conf 9999999999987998999999999870482