HHsearch alignment for GI: 254780592 and conserved domain: PRK11906
>PRK11906 transcriptional regulator; Provisional.
Probab=97.60 E-value=0.00052 Score=42.22 Aligned_cols=128 Identities=15% Similarity=0.082 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 11258876422110---000233566999999974---------211111000000000000000124577765433223
Q gi|254780592|r 120 LDEGLDAINRAQRP---DIPDWQLISAKGSVLAQM---------GKHSEALIEYERALELSPNESSIVSNIAMSYLLMGD 187 (271)
Q Consensus 120 ~~~A~~~~~~a~~~---~p~~~~~~~~lg~~~~~~---------~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~ 187 (271)
T Consensus 274 l~rAl~if~~~~n~s~~q~~~t~~Yc~LAEChlSlAl~G~se~e~A~~kA~e~~d~a~~i~~~n~qaLgllgLIsgL~~q 353 (458)
T PRK11906 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 (458)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
T ss_conf 99999999987416788756666501199999999984622788999999999999883677776788999998613423
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 554359999999538985478889999999869989999999986291728665999999
Q gi|254780592|r 188 LKTAEEKLRFASQMIGADSRIRQNLALVVGLQGRMKEAYSIASQELSPEEATRNIKYIKS 247 (271)
Q Consensus 188 ~~~A~~~~~~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~~~L~~~~~~~~~~~l~~ 247 (271)
T Consensus 354 ~~Vs~~LFeQA~ll~p~s~di~yy~~~~~F~~g~leea~~~I~ksL~leP~r~~a~i~k~ 413 (458)
T PRK11906 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 (458)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf 669899998741469986331213335356337408899999998614940100245677