HHsearch alignment for GI: 254780592 and conserved domain: TIGR02917

>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein; InterPro: IPR014266 This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system , analogous to the LPXTG/sortase system common in Gram-positive bacteria. The proteins in this entry occur in a species if, and only if, a transmembrane histidine kinase (IPR014265 from INTERPRO) and a DNA-binding response regulator (IPR014264 from INTERPRO) also occur. The present of tetratricopeptide repeats (TPR) suggests they may be involved in protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator..
Probab=99.93  E-value=4.9e-24  Score=164.98  Aligned_cols=222  Identities=16%  Similarity=0.123  Sum_probs=140.0

Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH
Q ss_conf             99999842019999999999999575787999999999987410012446665566327521001355553210000011
Q gi|254780592|r   42 ESLENMNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLD  121 (271)
Q Consensus        42 ~~~~~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~  121 (271)
T Consensus       389 lG~~~L~~g~~~~A~~yl~ka~~~~P~~a~~~t~lG~~~L~~Gd~~~Ai~dL~~A~~l~~~~~~a~~~L~~~yL~~~~~d  468 (924)
T TIGR02917       389 LGEAYLAKGDFEKAAEYLAKASELDPENAAARTKLGISKLSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGEFD  468 (924)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999863896789999987610589808899999988620688347899999999727775347899999887420489


Q ss_pred             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             25887642211000023356699999997421111100000000000000012457776543322355435999999953
Q gi|254780592|r  122 EGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQM  201 (271)
Q Consensus       122 ~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~  201 (271)
T Consensus       469 KAla~~~~l~~~~pd~p~~~nl~G~i~l~~~~~~kA~~~f~~AL~i~p~~~~A~~nLA~~d~~~~~~~~A~~r~~~~l~~  548 (924)
T TIGR02917       469 KALAAAKKLEKKQPDNPSLHNLLGAIYLGKKDLAKAREAFEKALKIEPDFFPAAANLARIDLQEGNPDDAKQRFEKVLTI  548 (924)
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             99999999975288982689999999985178789999999875318778478999999887428968999999999875


Q ss_pred             CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8985478889999999869989999999986291728665--9999999983212999999997
Q gi|254780592|r  202 IGADSRIRQNLALVVGLQGRMKEAYSIASQELSPEEATRN--IKYIKSILSQRDPWKKIAKARS  263 (271)
Q Consensus       202 ~p~~~~~~~~La~~~~~~g~~~eA~~~~~~~L~~~~~~~~--~~~l~~~l~~~~~~~~~a~a~~  263 (271)
T Consensus       549 ~P~~~~a~~~La~L~~~~g~~~~~~~~l~~A~~~~~~~~~p~l~L~~~yl~~~~l~kAl~~l~~  612 (924)
T TIGR02917       549 DPKNLRALLALAELAARTGNEEEAVAWLEKAAEKNPKEIEPALALAQYYLSKGELKKALAILNE  612 (924)
T ss_pred             CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             7433799999999998518968999999999862817777899999999865898789999999