HHsearch alignment for GI: 254780592 and conserved domain: cd05804
>cd05804 StaR_like StaR_like; a well-conserved protein found in bacteria, plants, and animals. A family member from Streptomyces toyocaensis, StaR is part of a gene cluster involved in the biosynthesis of glycopeptide antibiotics (GPAs), specifically A47934. It has been speculated that StaR could be a flavoprotein hydroxylating a tyrosine sidechain. Some family members have been annotated as proteins containing tetratricopeptide (TPR) repeats, which may at least indicate mostly alpha-helical secondary structure.
Probab=98.90 E-value=2e-07 Score=63.19 Aligned_cols=168 Identities=21% Similarity=0.188 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 879999999999874100124466655663275210013555532100----0001125887642211000023356699
Q gi|254780592|r 69 NKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLAN----AGYLDEGLDAINRAQRPDIPDWQLISAK 144 (271)
Q Consensus 69 ~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~----~g~~~~A~~~~~~a~~~~p~~~~~~~~l 144 (271)
T Consensus 42 ~RE~~hv~a~~~~~~g~~~~A~~~~~~~l~~~P~D~lalk~-~~~~f~lg~~~g~~~~~~~~l~~~~p~~~~~~~~~gm~ 120 (355)
T cd05804 42 ERERAHVEALSAWIAGDLPKALALLEQLLDDYPRDLLALKL-HLGAFGLGDFSGMRDHVARVLPLWAPENPDYWYLLGML 120 (355)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH-HHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 89999999999998799789999999999869835999998-76741025413240569999872573489836999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHCC
Q ss_conf 9999974211111000000000000000124577765433223554359999999538985----478889999999869
Q gi|254780592|r 145 GSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGAD----SRIRQNLALVVGLQG 220 (271)
Q Consensus 145 g~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~La~~~~~~g 220 (271)
T Consensus 121 AF~leE~g~~~~Ae~~a~~al~~np~d~wa~HAvAHv~~~~g~~~eG~~~l~~~~~~w~~~~~l~~H~wWH~AL~~Le~g 200 (355)
T cd05804 121 AFGLEEAGQYDRAEEAARRALELNPDDAWAVHAVAHVLEMQGRFKEGIAFMESWRDTWDCSSMLRGHNWWHLALFYLERG 200 (355)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999858899999999999963999937999999999983887889999985175257788589899999999988778
Q ss_pred CHHHHHHHHHHHCCCCC
Q ss_conf 98999999998629172
Q gi|254780592|r 221 RMKEAYSIASQELSPEE 237 (271)
Q Consensus 221 ~~~eA~~~~~~~L~~~~ 237 (271)
T Consensus 201 ~~~~~l~iyD~~i~~~~ 217 (355)
T cd05804 201 DYEAALAIYDTHIAPSA 217 (355)
T ss_pred CHHHHHHHHHHHHCCCC
T ss_conf 98899999888744566