HHsearch alignment for GI: 254780592 and conserved domain: pfam04053

>pfam04053 Coatomer_WDAD Coatomer WD associated region. This region is composed of WD40 repeats.
Probab=96.10  E-value=0.084  Score=28.70  Aligned_cols=158  Identities=17%  Similarity=0.157  Sum_probs=101.0

Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHH
Q ss_conf             99984201999999999999957578799999999998741001244666556632752100135555321000001125
Q gi|254780592|r   44 LENMNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEG  123 (271)
Q Consensus        44 ~~~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A  123 (271)
T Consensus       263 k~av~r~d~~~~~~~~~~~~l~~p~--~~~~~i~~fLe~~G~~e~AL~~~~-----D~---~~rFe---LAl~lG~L~~A  329 (435)
T pfam04053       263 KTALLRKDYEEVLRIIANSNLLPPK--DQGQKIIRFLEKKGYPELALQFVT-----DP---DTRFD---LALELGNLDVA  329 (435)
T ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHCCCHHHHHHHCC-----CH---HHHHH---HHHHCCCHHHH
T ss_conf             9999757788999876421336873--466799999997797888876608-----90---47616---76861999999


Q ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             88764221100002335669999999742111110000000000000001245777654332235543599999995389
Q gi|254780592|r  124 LDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIG  203 (271)
Q Consensus       124 ~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p  203 (271)
T Consensus       330 ~~~A~~~-----~~~~~Wk~Lg~~AL~~g~~~lAe~~~~k~~d~--------~~LllLy~~tG~~~~L~kl~~~a~~~g~  396 (435)
T pfam04053       330 LEIAKEL-----DDEHKWKRLGDAALSQGNIKLAEEAYQKAKDF--------DKLLLLYLSTGNKEKLKKLAKIAEERGD  396 (435)
T ss_pred             HHHHHHH-----CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCH--------HHHHHHHHHCCCHHHHHHHHHHHHHCCC
T ss_conf             9999873-----67999999999999749958999999974253--------4559999984999999999999998476


Q ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             85478889999999869989999999986
Q gi|254780592|r  204 ADSRIRQNLALVVGLQGRMKEAYSIASQE  232 (271)
Q Consensus       204 ~~~~~~~~La~~~~~~g~~~eA~~~~~~~  232 (271)
T Consensus       397 ~n~aF~-----~~~~lgd~~~cv~lL~~t  420 (435)
T pfam04053       397 YNSAFQ-----NALYLGDVEKCVDILIKT  420 (435)
T ss_pred             CCHHHH-----HHHHHCCHHHHHHHHHHC
T ss_conf             229999-----998808999999999985