HHsearch alignment for GI: 254780592 and conserved domain: pfam04733

>pfam04733 Coatomer_E Coatomer epsilon subunit. This family represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex.
Probab=99.33  E-value=8.5e-10  Score=77.68  Aligned_cols=201  Identities=16%  Similarity=0.115  Sum_probs=149.7

Q ss_pred             CHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             19999999999999--5757879999999999874100124466655663275210013555532100000112588764
Q gi|254780592|r   51 QLLEVTSTIGLQYQ--SHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAIN  128 (271)
Q Consensus        51 ~~~~A~~~~~~al~--~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~  128 (271)
T Consensus        81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~aati~~~~g~~e~AL~~l~~~-----~~lE~~al~VQi~L~~nR~DLA~ke~~  155 (290)
T pfam04733        81 RKESILASLKEWVADSHIGSNSTLRLLAAIIFIHEGDFDDALKHLHKG-----ENLEAMALNVQILLKMHRIDLAEQQLK  155 (290)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC-----CCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             145699999999874015667899999999999779999999998558-----966799999999997288367999999


Q ss_pred             HHHHHHCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf             221100002335669999999742--111110000000000000001245777654332235543599999995389854
Q gi|254780592|r  129 RAQRPDIPDWQLISAKGSVLAQMG--KHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADS  206 (271)
Q Consensus       129 ~a~~~~p~~~~~~~~lg~~~~~~~--~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~  206 (271)
T Consensus       156 ~~q~~~eDs~l~qLa~awv~l~~Ggek~q~A~yif~EL~~~~~~t~lllng~Av~~m~~~~~~eAe~~L~eAl~~d~~d~  235 (290)
T pfam04733       156 KMQQIDEDATLTQLANAWVKLAVGGEKIQDAYYIFQEFSEKYDSTPLLLNGQAVCCMCLGRYEEAESLLKEALDKDAKDP  235 (290)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
T ss_conf             98843510599999999999972647789899999999852289789999999999874787999999999987288988


Q ss_pred             HHHHHHHHHHHHCCCHHHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7888999999986998999-9999986291728665999999998321299999
Q gi|254780592|r  207 RIRQNLALVVGLQGRMKEA-YSIASQELSPEEATRNIKYIKSILSQRDPWKKIA  259 (271)
Q Consensus       207 ~~~~~La~~~~~~g~~~eA-~~~~~~~L~~~~~~~~~~~l~~~l~~~~~~~~~a  259 (271)
T Consensus       236 dtlaNliv~s~~~gK~~e~~~ryl~qL~~~~p~H~~v---~~~~~k~~~FD~~~  286 (290)
T pfam04733       236 ETLINLVVCALHLGKPAEVSNRNLSQLKLSHPTHPLV---KDLNEKEAEFDRAV  286 (290)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHH
T ss_conf             9999999999980998789999999998629998599---99999999999999