HHsearch alignment for GI: 254780592 and conserved domain: pfam04733
>pfam04733 Coatomer_E Coatomer epsilon subunit. This family represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex.
Probab=99.33 E-value=8.5e-10 Score=77.68 Aligned_cols=201 Identities=16% Similarity=0.115 Sum_probs=149.7
Q ss_pred CHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 19999999999999--5757879999999999874100124466655663275210013555532100000112588764
Q gi|254780592|r 51 QLLEVTSTIGLQYQ--SHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAIN 128 (271)
Q Consensus 51 ~~~~A~~~~~~al~--~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~ 128 (271)
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~~~~~aati~~~~g~~e~AL~~l~~~-----~~lE~~al~VQi~L~~nR~DLA~ke~~ 155 (290)
T pfam04733 81 RKESILASLKEWVADSHIGSNSTLRLLAAIIFIHEGDFDDALKHLHKG-----ENLEAMALNVQILLKMHRIDLAEQQLK 155 (290)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC-----CCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 145699999999874015667899999999999779999999998558-----966799999999997288367999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 221100002335669999999742--111110000000000000001245777654332235543599999995389854
Q gi|254780592|r 129 RAQRPDIPDWQLISAKGSVLAQMG--KHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADS 206 (271)
Q Consensus 129 ~a~~~~p~~~~~~~~lg~~~~~~~--~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 206 (271)
T Consensus 156 ~~q~~~eDs~l~qLa~awv~l~~Ggek~q~A~yif~EL~~~~~~t~lllng~Av~~m~~~~~~eAe~~L~eAl~~d~~d~ 235 (290)
T pfam04733 156 KMQQIDEDATLTQLANAWVKLAVGGEKIQDAYYIFQEFSEKYDSTPLLLNGQAVCCMCLGRYEEAESLLKEALDKDAKDP 235 (290)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
T ss_conf 98843510599999999999972647789899999999852289789999999999874787999999999987288988
Q ss_pred HHHHHHHHHHHHCCCHHHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888999999986998999-9999986291728665999999998321299999
Q gi|254780592|r 207 RIRQNLALVVGLQGRMKEA-YSIASQELSPEEATRNIKYIKSILSQRDPWKKIA 259 (271)
Q Consensus 207 ~~~~~La~~~~~~g~~~eA-~~~~~~~L~~~~~~~~~~~l~~~l~~~~~~~~~a 259 (271)
T Consensus 236 dtlaNliv~s~~~gK~~e~~~ryl~qL~~~~p~H~~v---~~~~~k~~~FD~~~ 286 (290)
T pfam04733 236 ETLINLVVCALHLGKPAEVSNRNLSQLKLSHPTHPLV---KDLNEKEAEFDRAV 286 (290)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHH
T ss_conf 9999999999980998789999999998629998599---99999999999999