HHsearch alignment for GI: 254780592 and conserved domain: pfam09295
>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.
Probab=98.64 E-value=3e-07 Score=62.13 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=91.7
Q ss_pred HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 20199999999999995757879999999999874100124466655663275210013555532100000112588764
Q gi|254780592|r 49 HEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAIN 128 (271)
Q Consensus 49 ~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~ 128 (271)
T Consensus 182 t~~~~~~~~~le~L~~~~p---~v~~llakv~~~~~~E~~av~~i~~~L~~~p~d~~LL~~Qa~FLl~K~~yelAL~~A~ 258 (395)
T pfam09295 182 TKRYDRALNLLEKLREEEP---EVVSLLARVLLLMDEEIDAVKLMHDALQENPMDYELLCLQAEFLLSKKKDELALECAK 258 (395)
T ss_pred CCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 4438989999999875184---4999999999965608999999999986188767899999999981798899999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 221100002335669999999742111110000000
Q gi|254780592|r 129 RAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERA 164 (271)
Q Consensus 129 ~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~ 164 (271)
T Consensus 259 ~av~~~P~~F~~W~~La~~Yi~l~d~e~ALl~LNS~ 294 (395)
T pfam09295 259 RAVNSAPSEFKTWALLVKVYIKLEDWENALLTLNSC 294 (395)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 987317866188999999999863299999999568