HHsearch alignment for GI: 254780592 and conserved domain: pfam09613
>pfam09613 HrpB1_HrpK Bacterial type III secretion protein (HrpB1_HrpK). This family of proteins is encoded by genes found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia.
Probab=94.88 E-value=0.23 Score=26.03 Aligned_cols=72 Identities=7% Similarity=-0.058 Sum_probs=55.0
Q ss_pred HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH
Q ss_conf 201999999999999957578799999999998741001244666556632752100135555321000001
Q gi|254780592|r 49 HEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYL 120 (271)
Q Consensus 49 ~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~ 120 (271)
T Consensus 23 ~~~~~D~e~lL~AlRvLRP~~~e~d~~dg~l~i~rg~w~dA~r~lr~v~~~~~~~~~~kAL~A~CL~a~~D~ 94 (156)
T pfam09613 23 LADIADAEELLEALRILRPRLAELDLFDGWLYIGRGQWDDAARLLRELEGRASHLPLCKALMAQCLFALQDP 94 (156)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH
T ss_conf 488778999999999858983266587877877606589999999998626778489999999999874796