HHsearch alignment for GI: 254780593 and conserved domain: COG1968
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism].
Probab=100.00 E-value=0 Score=539.81 Aligned_cols=264 Identities=39% Similarity=0.740 Sum_probs=246.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCH
Q ss_conf 9531389999999987565310207426899999982868-1028999999848878999999988999861--346800
Q gi|254780593|r 1 MLRYSIIIALILGVVEGVTEFIPVSSTAHLLLVSRLLGAD-LGSSFIVLVQLGAVSALLYVYFGRILSIFVS--FPFSAA 77 (266)
Q Consensus 1 m~~m~~~~aiilgiiQGiTEfLPISSsgHl~l~~~ll~~~-~~~~f~v~lhlGtl~Avl~~f~~~i~~~~~~--~~~~~~ 77 (266)
T Consensus 1 m~~~~~~~aiiLGiVqGiTEfLPISSTgHlilv~~~l~~~~~~~~F~iviqlGailAV~~~f~~~i~~~l~~~~l~~~~~ 80 (270)
T COG1968 1 MDMMELLQAIILGIVEGITEFLPISSTGHLILVGHLLGFSDAGKSFEIVIQLGAILAVVVYFWNDLLRLLKGFRLKTDRE 80 (270)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 95589999999999960244344584268999999977697567999999998899999999999999973012466056
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 002--279988987653112554234442014578310024555688999999963200244433320244547788998
Q gi|254780593|r 78 ARH--FTITLFLGFFPTVVCGFFAYNFIKSILFKEMIIIHITLIIGGFILLLVDRLKFESKYFHIENYPIPLAIKIGLFQ 155 (266)
Q Consensus 78 ~~~--~~~~iiiatiP~~iiG~~~~~~i~~~~~~~~~~i~~~lii~gilL~~~d~~~~~~~~~~~~~~~~~~a~~IGl~Q 155 (266)
T Consensus 81 ~~~~~l~l~ilvatiPa~v~Gl~~~d~i~~~l~-~~~~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGlaQ 159 (270)
T COG1968 81 SRRFRLWLKILVATIPAVVLGLLFKDFIKSHLF-NPRVVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLAQ 159 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf 678999999999998188866779988998715-7089999999999999999984435576875328999999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74421035688899999997268889999999999999999999863221111000000499999999999999999999
Q gi|254780593|r 156 CIAMIPGTSRSGATITGALILGADKRSAAEFSFFIAIPTIIGACVLDFYKNYNVIVNNIGKEIIIGFMASFITSLLVIRS 235 (266)
Q Consensus 156 ~lAliPGiSRSG~TI~~~l~lG~~r~~A~~fSFllsiP~i~gA~~l~~~~~~~~~~~~~~~~~~ig~~~sfi~~~~~i~~ 235 (266)
T Consensus 160 ~lAl~PG~SRSGaTI~~~lllG~~r~~AaefSFlLaIP~m~GA~~l~l~k~~~~~~~~~~~~l~vg~i~AFvv~~~~I~~ 239 (270)
T COG1968 160 CLALIPGTSRSGATISGGLLLGLSREAAAEFSFLLAIPAMFGASALDLFKSGDALSAADLPILLVGFIVAFVVSLIAIKF 239 (270)
T ss_pred HHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99875788863899999999188898899997998988999999999986201000210699999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999998188701476689999999999867
Q gi|254780593|r 236 LFQVIAKRGYTPFALWRILIGFVGLFLEIF 265 (266)
Q Consensus 236 ll~~~~~~~l~~F~~Yri~lG~~~l~~~~~ 265 (266)
T Consensus 240 ll~~i~~~~~~~F~~Yrivlgi~~l~~~~~ 269 (270)
T COG1968 240 LLRFIKRHSFIPFAIYRIVLGIVVLVLLFI 269 (270)
T ss_pred HHHHHHHCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 999998689702179999999999999973