HHsearch alignment for GI: 254780594 and conserved domain: KOG3027

Probab=98.98  E-value=1.1e-07  Score=63.47  Aligned_cols=184  Identities=13%  Similarity=0.169  Sum_probs=118.9

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             98689999999998699829998886777889998556877520111000111012103567775288723343356799
Q gi|254780594|r    9 LSSSSRFIRLILSEYEFTTDMIEEFPWGKRREFLELNPSGTLPVYIDEHMQALCGVFVISEYLDETYGAIAQKNRLLSTD   88 (230)
Q Consensus         9 ~sp~~~kvr~~L~e~gi~y~~~~~~~~~~~~~~~~lnP~g~vP~L~~~dg~~l~eS~aI~~yL~~~~~~~~~~~~L~p~~   88 (230)
T Consensus        33 d~ascLAVqtfLrMcnLPf~v~~~----~Naef--mSP~G~vPllr~-g~~~~aef~pIV~fVeak~~~l--~-s--~ls  100 (257)
T KOG3027          33 DNASCLAVQTFLRMCNLPFNVRQR----ANAEF--MSPGGKVPLLRI-GKTLFAEFEPIVDFVEAKGVTL--T-S--WLS  100 (257)
T ss_pred             CCHHHHHHHHHHHHCCCCCEEEEC----CCCCC--CCCCCCCCEEEE-CCHHHHHHHHHHHHHHHHCCCH--H-H--HHH
T ss_conf             622579999999973897425655----87441--189987744665-6216540247999999853420--0-0--013


Q ss_pred             HHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHCCCCC------------------------HHHHHHHHHH
Q ss_conf             999999999999986123425-778999988776642122102334------------------------3999999999
Q gi|254780594|r   89 PLQRAETRRMIEWFMYQMEQD-VTRPLAHERVYKLHMTTEQGGGSP------------------------DSKVLRIARN  143 (230)
Q Consensus        89 ~~~ra~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~  143 (230)
T Consensus       101 E~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie  180 (257)
T KOG3027         101 EDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIE  180 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             67898899999999999999999998420777878755404887777289899888899999997653746353889999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCC----CHHHCHHHHHHHHHHHC
Q ss_conf             9999985565453479842667502899999999999996--1899----94567688999999970
Q gi|254780594|r  144 NMREHIKYITWLIKSRSWIAGHHMSYADFAASATISILDY--LGEI----DWDTAPIVKEWYQRMKS  204 (230)
Q Consensus       144 ~l~~~l~~le~~l~~~~fl~Gd~~s~ADi~~~~~l~~~~~--~~~~----~~~~~p~l~~w~~r~~~  204 (230)
T Consensus       181 ~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq  247 (257)
T KOG3027         181 QVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ  247 (257)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999986678765789961788899866688653037728999999986899999999999