PSIBLAST alignment of GI: 254780594 and protein with PDB id: 1yy7
gi|61680862|pdb|1YY7|A Chain A, Crystal Structure Of Stringent Starvation Protein A (Sspa), An Rna Polymerase-Associated Transcription Factor Length = 213
>gi|61680863|pdb|1YY7|B Chain B, Crystal Structure Of Stringent Starvation Protein A (Sspa), An Rna Polymerase-Associated Transcription Factor Length = 213
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 23/219 (10%)
Query: 2 SILYHYPLSSSSRFIRLILSEYEFTTDMIEEFPWGKRREFLELNPSGTLPVYIDEHMQAL 61
L+ P S +R++L+E + ++ + ++ ++LNP T+P +D + L
Sbjct: 11 MTLFSGPTDIFSHQVRIVLAEKGVSVEIEQVEADNLPQDLIDLNPYRTVPTLVDRELT-L 69
Query: 62 CGVFVISEYLDETYGAIAQKNRLLSTDPLQRAETRRMIEWFMYQMEQDVTRPLAHERVYK 121
+I EYLDE + P+ R +R M+ R+
Sbjct: 70 YESRIIMEYLDERFPHPPLMPVY----PVARGSSRLMMH-----------------RIEH 108
Query: 122 LHMTTEQGGGSPDSKVLRIARNNMREHIKYITWLIKSRSWIAGHHMSYADFAASATISIL 181
+ +++ AR +RE + I + + S D + + L
Sbjct: 109 DWYSLLYKIEQGNAQEAEAARKQLREELLSIAPVFNETPFFMSEEFSLVDCYLAPLLWRL 168
Query: 182 DYLG-EIDWDTAPIVKEWYQRMKSRPSFRPLLSERIRGL 219
LG E + +K + R+ R +F L+E R +
Sbjct: 169 PVLGIEFTGAGSKELKGYMTRVFERDAFLASLTEAEREM 207