HHsearch alignment for GI: 254780595 and conserved domain: PRK05599
>PRK05599 hypothetical protein; Provisional.
Probab=98.94 E-value=2.9e-08 Score=66.66 Aligned_cols=183 Identities=14% Similarity=0.088 Sum_probs=104.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHCC---CEEEECCCCCCCH---H---HHHHHCCCC
Q ss_conf 93999888-8889999999998898899996794463455----6449---8289806786402---3---465411563
Q gi|254780595|r 1 MHLMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNLLTL----KHKG---ISPFLFADQKINN---L---LREKLYFTT 66 (289)
Q Consensus 1 MkIlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~~~---~~~~~~~~~~~~~---~---~~~~~~~~~ 66 (289)
T Consensus 1 MtvlITGASsGIG~a~A~~lA-~G~~vvl~~R~~e~l~~l~~~l~~~g~~~v~~~~~Dvtd~~~~~~~v~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLA-HGEDVVLAARRPEAAGGLAEDLRQLGATSVHVLSFDATDLDSHRELVKQTQELAGEIS 79 (246)
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 989998886899999999998-5994999999999999999999862597189972899999999999999998619843
Q ss_pred EEEEEECCCCCCC-----EE-ECC-CCCHH----------HHHH--H-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 2787612444331-----00-012-21013----------4432--0-12334333320102576212345321123431
Q gi|254780595|r 67 HIVQCIKPSSEGD-----PC-IIS-MSKDF----------YKFM--P-HVKWIGYLSSTSIYGNREGQWVDEHSFVHPIS 126 (289)
Q Consensus 67 ~v~~~~~~~~~~~-----~~-~~~-~~~~~----------~~~~--~-~~~~~i~~SS~~VYg~~~g~~i~E~~~~~P~~ 126 (289)
T Consensus 80 ~lv~naGi~~~~~~~~~d~~~~~~~~~vN~~~~~~~~~~~~~~~~~~~~~G~Iv~iSSvag~~-----------~~~~~~ 148 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTTPSTIVAFSSIAGWR-----------ARRANY 148 (246)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCC-----------CCCCCC
T ss_conf 999877667873201189999999999886999999999999998546994799996767578-----------788885
Q ss_pred HHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCC
Q ss_conf 134554455554320---01234567642034777789850344431134543222110001024777799999995135
Q gi|254780595|r 127 CVATQRFNAEKEWLA---ITKKLNIKLAVLRLSGIYGPKRNPFIKIRQKNSLRLVKKNQVFNRIRVEDVARCVIFLMTHH 203 (289)
Q Consensus 127 ~y~~~k~~~E~~~~~---~~~~~~~~~~ilR~~~iyGp~r~~~~~~~~g~~~~~~~~~~~~~~ihv~Dva~~i~~l~~~~ 203 (289)
T Consensus 149 ~Y~ASKaal~~~~~~L~~el~~~gI~V~~v~PG~V~T~----mt---~~~~-----~~p--~~~spe~~A~~i~~~i~~~ 214 (246)
T PRK05599 149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS----MT---TGMK-----PAP--MSVYPRDVAAAVVSAITSK 214 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----CC---CCCC-----CCC--CCCCHHHHHHHHHHHHHHC
T ss_conf 08699999999999999995377968999844988362----00---7999-----898--7589999999999999818
Q ss_pred CCCCEE
Q ss_conf 578616
Q gi|254780595|r 204 LGGIFN 209 (289)
Q Consensus 204 ~~~iyn 209 (289)
T Consensus 215 k~~~~i 220 (246)
T PRK05599 215 KRSTTL 220 (246)
T ss_pred CCCEEE
T ss_conf 986699