HHsearch alignment for GI: 254780595 and conserved domain: PRK07680
>PRK07680 late competence protein ComER; Validated.
Probab=97.31 E-value=0.0018 Score=39.26 Aligned_cols=67 Identities=24% Similarity=0.355 Sum_probs=50.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHC--CCEEEECCCCCCCHHHHHHHCCCCEEEEEECC
Q ss_conf 93999888888999999999889----8899996794463455644--98289806786402346541156327876124
Q gi|254780595|r 1 MHLMIFGAGYTGKFIADAALKVG----VYTCGTTRSVSNLLTLKHK--GISPFLFADQKINNLLREKLYFTTHIVQCIKP 74 (289)
Q Consensus 1 MkIlI~GaG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 74 (289)
T Consensus 1 MkI~fIG~GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~~~l~~~~~~i~~~--------~~~~~~~~~~dvIiLaVKP 72 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLESRAVKPSCLTITNRTPAKAYHIKEKYPSIHVA--------KTIEEVIEQSELIFICVKP 72 (273)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEE--------CCHHHHHHCCCEEEEECCH
T ss_conf 98999876999999999999779989456999889989999999876990886--------8889998409989996488
Q ss_pred C
Q ss_conf 4
Q gi|254780595|r 75 S 75 (289)
Q Consensus 75 ~ 75 (289)
T Consensus 73 q 73 (273)
T PRK07680 73 L 73 (273)
T ss_pred H
T ss_conf 8