HHsearch alignment for GI: 254780595 and conserved domain: PRK10217
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional.
Probab=100.00 E-value=0 Score=288.49 Aligned_cols=279 Identities=15% Similarity=0.164 Sum_probs=192.4
Q ss_pred CE-EEEECC-CHHHHHHHHHHHHCCCEEEEEECCH------HHHHHH-HHCCCEEEECCCCCCCHHHHHHHCC--CCEEE
Q ss_conf 93-999888-8889999999998898899996794------463455-6449828980678640234654115--63278
Q gi|254780595|r 1 MH-LMIFGA-GYTGKFIADAALKVGVYTCGTTRSV------SNLLTL-KHKGISPFLFADQKINNLLREKLYF--TTHIV 69 (289)
Q Consensus 1 Mk-IlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~ 69 (289)
T Consensus 1 MKkILVTGg~GFIGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~l~~~~~~~~pD~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDIC-DRAELARVFTEYQPDCVM 79 (355)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCC-CHHHHHHHHHHCCCCEEE
T ss_conf 9969993787579999999999769988999828987652544445412787169980058-899999999861998899
Q ss_pred EEECCCCCC----CE-----EECCCCCHHHHH-----------HHCCCCCCCCCCEEECCCC--CCCCCCCCCCCCCCCH
Q ss_conf 761244433----10-----001221013443-----------2012334333320102576--2123453211234311
Q gi|254780595|r 70 QCIKPSSEG----DP-----CIISMSKDFYKF-----------MPHVKWIGYLSSTSIYGNR--EGQWVDEHSFVHPISC 127 (289)
Q Consensus 70 ~~~~~~~~~----~~-----~~~~~~~~~~~~-----------~~~~~~~i~~SS~~VYg~~--~g~~i~E~~~~~P~~~ 127 (289)
T Consensus 80 HlAa~~~~~~s~~~p~~~~~~N~~gt~~lleaar~~~~~l~~~~~~~~~~~~~SS~~vYG~~~~~~~~~~E~~~~~P~s~ 159 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP 159 (355)
T ss_pred EECCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 94242211012119677543030757899999999775443303661488865542003677788887677888899988
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-------HHHHHHCCCCCCC-CCCCCEECCHHHHHHHHHHHHH
Q ss_conf 3455445555432001234567642034777789850-------3444311345432-2211000102477779999999
Q gi|254780595|r 128 VATQRFNAEKEWLAITKKLNIKLAVLRLSGIYGPKRN-------PFIKIRQKNSLRL-VKKNQVFNRIRVEDVARCVIFL 199 (289)
Q Consensus 128 y~~~k~~~E~~~~~~~~~~~~~~~ilR~~~iyGp~r~-------~~~~~~~g~~~~~-~~~~~~~~~ihv~Dva~~i~~l 199 (289)
T Consensus 160 Yg~sK~~~E~l~~~~~~~~gl~~~i~R~~nvYGP~~~~~~~i~~~i~~~~~g~~i~i~G~G~q~Rdf~yV~D~v~a~~~~ 239 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239 (355)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
T ss_conf 89998766554355554158876972357557919998404999999997499886279998289758589999999999
Q ss_pred HCC-CCCCCEECCCCCHHHHHHHHHHHHHHHCCCC---CCC-------CCCCCCCCCHHHHHHHCCCCEECHHHHH-HCC
Q ss_conf 513-5578616268433338999999999955799---863-------4310125682446553069451689999-739
Q gi|254780595|r 200 MTH-HLGGIFNLSDDEPAPPQNVIMEAASLMKITP---PLE-------QCFDTANISPFTRFFYADNKRISNAKIK-SLG 267 (289)
Q Consensus 200 ~~~-~~~~iyni~~~~~~s~~e~~~~i~~~~g~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~is~~kl~-~lG 267 (289)
T Consensus 240 ~~~~~~ge~yNiG~g~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~i~~~~~--rp~----~~~~~~~D~ska~~~LG 313 (355)
T PRK10217 240 ATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVAD--RPG----HDLRYAIDASKIARELG 313 (355)
T ss_pred HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC--CCC----CCCEEEECHHHHHHHHC
T ss_conf 966999997997999962079999999999997623566554443455156799--999----98563228899999849
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q ss_conf 84489999999999999751
Q gi|254780595|r 268 FQLLYPNYRISLKQLWKEIE 287 (289)
Q Consensus 268 ~~p~~p~~~~gl~~~~~~~~ 287 (289)
T Consensus 314 w~P~~-sleeGl~~ti~Wy~ 332 (355)
T PRK10217 314 WLPQE-TFESGMRKTVQWYL 332 (355)
T ss_pred CCCCC-CHHHHHHHHHHHHH
T ss_conf 98899-99999999999999