HHsearch alignment for GI: 254780595 and conserved domain: PRK10217

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional.
Probab=100.00  E-value=0  Score=288.49  Aligned_cols=279  Identities=15%  Similarity=0.164  Sum_probs=192.4

Q ss_pred             CE-EEEECC-CHHHHHHHHHHHHCCCEEEEEECCH------HHHHHH-HHCCCEEEECCCCCCCHHHHHHHCC--CCEEE
Q ss_conf             93-999888-8889999999998898899996794------463455-6449828980678640234654115--63278
Q gi|254780595|r    1 MH-LMIFGA-GYTGKFIADAALKVGVYTCGTTRSV------SNLLTL-KHKGISPFLFADQKINNLLREKLYF--TTHIV   69 (289)
Q Consensus         1 Mk-IlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~   69 (289)
T Consensus         1 MKkILVTGg~GFIGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~~l~~~~~~~~pD~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDIC-DRAELARVFTEYQPDCVM   79 (355)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCC-CHHHHHHHHHHCCCCEEE
T ss_conf             9969993787579999999999769988999828987652544445412787169980058-899999999861998899


Q ss_pred             EEECCCCCC----CE-----EECCCCCHHHHH-----------HHCCCCCCCCCCEEECCCC--CCCCCCCCCCCCCCCH
Q ss_conf             761244433----10-----001221013443-----------2012334333320102576--2123453211234311
Q gi|254780595|r   70 QCIKPSSEG----DP-----CIISMSKDFYKF-----------MPHVKWIGYLSSTSIYGNR--EGQWVDEHSFVHPISC  127 (289)
Q Consensus        70 ~~~~~~~~~----~~-----~~~~~~~~~~~~-----------~~~~~~~i~~SS~~VYg~~--~g~~i~E~~~~~P~~~  127 (289)
T Consensus        80 HlAa~~~~~~s~~~p~~~~~~N~~gt~~lleaar~~~~~l~~~~~~~~~~~~~SS~~vYG~~~~~~~~~~E~~~~~P~s~  159 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP  159 (355)
T ss_pred             EECCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             94242211012119677543030757899999999775443303661488865542003677788887677888899988


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-------HHHHHHCCCCCCC-CCCCCEECCHHHHHHHHHHHHH
Q ss_conf             3455445555432001234567642034777789850-------3444311345432-2211000102477779999999
Q gi|254780595|r  128 VATQRFNAEKEWLAITKKLNIKLAVLRLSGIYGPKRN-------PFIKIRQKNSLRL-VKKNQVFNRIRVEDVARCVIFL  199 (289)
Q Consensus       128 y~~~k~~~E~~~~~~~~~~~~~~~ilR~~~iyGp~r~-------~~~~~~~g~~~~~-~~~~~~~~~ihv~Dva~~i~~l  199 (289)
T Consensus       160 Yg~sK~~~E~l~~~~~~~~gl~~~i~R~~nvYGP~~~~~~~i~~~i~~~~~g~~i~i~G~G~q~Rdf~yV~D~v~a~~~~  239 (355)
T PRK10217        160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV  239 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
T ss_conf             89998766554355554158876972357557919998404999999997499886279998289758589999999999


Q ss_pred             HCC-CCCCCEECCCCCHHHHHHHHHHHHHHHCCCC---CCC-------CCCCCCCCCHHHHHHHCCCCEECHHHHH-HCC
Q ss_conf             513-5578616268433338999999999955799---863-------4310125682446553069451689999-739
Q gi|254780595|r  200 MTH-HLGGIFNLSDDEPAPPQNVIMEAASLMKITP---PLE-------QCFDTANISPFTRFFYADNKRISNAKIK-SLG  267 (289)
Q Consensus       200 ~~~-~~~~iyni~~~~~~s~~e~~~~i~~~~g~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~is~~kl~-~lG  267 (289)
T Consensus       240 ~~~~~~ge~yNiG~g~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~i~~~~~--rp~----~~~~~~~D~ska~~~LG  313 (355)
T PRK10217        240 ATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVAD--RPG----HDLRYAIDASKIARELG  313 (355)
T ss_pred             HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC--CCC----CCCEEEECHHHHHHHHC
T ss_conf             966999997997999962079999999999997623566554443455156799--999----98563228899999849


Q ss_pred             CCCCCCCHHHHHHHHHHHHH
Q ss_conf             84489999999999999751
Q gi|254780595|r  268 FQLLYPNYRISLKQLWKEIE  287 (289)
Q Consensus       268 ~~p~~p~~~~gl~~~~~~~~  287 (289)
T Consensus       314 w~P~~-sleeGl~~ti~Wy~  332 (355)
T PRK10217        314 WLPQE-TFESGMRKTVQWYL  332 (355)
T ss_pred             CCCCC-CHHHHHHHHHHHHH
T ss_conf             98899-99999999999999