HHsearch alignment for GI: 254780595 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=97.20 E-value=0.00083 Score=41.25 Aligned_cols=73 Identities=21% Similarity=0.108 Sum_probs=42.9
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCC--EEEEEECCHHHHH----HHHHCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEC
Q ss_conf 939998888-889999999998898--8999967944634----556449828980678640234654115632787612
Q gi|254780595|r 1 MHLMIFGAG-YTGKFIADAALKVGV--YTCGTTRSVSNLL----TLKHKGISPFLFADQKINNLLREKLYFTTHIVQCIK 73 (289)
Q Consensus 1 MkIlI~GaG-~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 73 (289)
T Consensus 1 mKV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~--~~~~~~~~~~~~~~~~~~~daDiVVitaG 78 (142)
T pfam00056 1 VKVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHG--STFLSVPGIVGGDDYEALKDADVVVITAG 78 (142)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCC--CCCCCCCEEECCCCHHHHCCCCEEEEECC
T ss_conf 9899989877899999999974796634788505776411799998614--43478876974883888378999998157
Q ss_pred CC
Q ss_conf 44
Q gi|254780595|r 74 PS 75 (289)
Q Consensus 74 ~~ 75 (289)
T Consensus 79 ~~ 80 (142)
T pfam00056 79 VP 80 (142)
T ss_pred CC
T ss_conf 77