HHsearch alignment for GI: 254780595 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=97.43 E-value=0.00093 Score=40.96 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=49.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCC----CEEEECCCCCCCHHHHHHHCCCCEEEEEEC
Q ss_conf 939998888889999999998898-8999967944634556449----828980678640234654115632787612
Q gi|254780595|r 1 MHLMIFGAGYTGKFIADAALKVGV-YTCGTTRSVSNLLTLKHKG----ISPFLFADQKINNLLREKLYFTTHIVQCIK 73 (289)
Q Consensus 1 MkIlI~GaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 73 (289)
T Consensus 13 ~~vlVIGaG~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~------~~l~~~l~~~DivI~aT~ 84 (134)
T pfam01488 13 KKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALPL------DELEELLAEADIVISATS 84 (134)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEC------HHHHHHHHHCCEEEEECC
T ss_conf 989999960999999999997599889995475789999999849972589851------354413631999999259