RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR02203

>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
 Score = 90.5 bits (225), Expect = 8e-19
 Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 28/214 (13%)

Query: 32  VLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIKDPPKD---- 87
            LD ++  +  GE V L+GRSGSGKSTL+ +I     P SGQ+L  G  + D        
Sbjct: 347 ALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRR 406

Query: 88  -ISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRK--RALSAIDLI-----GLDGFES 139
            +++V Q   LF   T+  N+  G + +  D+ E  +   A  A D +     GLD    
Sbjct: 407 QVALVSQDVVLFN-DTIANNIAYG-RTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIG 464

Query: 140 AHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIEGRLPIE 199
            +   +SGG  QR+  ARA +    +L++DE  SALD   +E L    ++  ++GR    
Sbjct: 465 ENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDN-ESERLVQAALERLMQGR---- 519

Query: 200 SMLMVTH---NIEEAVLMCDRVLVFSSNPGRIAE 230
           + L++ H    IE+A    DR++V     GRI E
Sbjct: 520 TTLVIAHRLSTIEKA----DRIVVMDD--GRIVE 547