RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 90.5 bits (225), Expect = 8e-19
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 28/214 (13%)
Query: 32 VLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIKDPPKD---- 87
LD ++ + GE V L+GRSGSGKSTL+ +I P SGQ+L G + D
Sbjct: 347 ALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRR 406
Query: 88 -ISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRK--RALSAIDLI-----GLDGFES 139
+++V Q LF T+ N+ G + + D+ E + A A D + GLD
Sbjct: 407 QVALVSQDVVLFN-DTIANNIAYG-RTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIG 464
Query: 140 AHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIEGRLPIE 199
+ +SGG QR+ ARA + +L++DE SALD +E L ++ ++GR
Sbjct: 465 ENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDN-ESERLVQAALERLMQGR---- 519
Query: 200 SMLMVTH---NIEEAVLMCDRVLVFSSNPGRIAE 230
+ L++ H IE+A DR++V GRI E
Sbjct: 520 TTLVIAHRLSTIEKA----DRIVVMDD--GRIVE 547