RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR02211
>gnl|CDD|131266 TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina. Length = 221
Score = 123 bits (311), Expect = 8e-29
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 15/219 (6%)
Query: 11 LLEIQDICQSFSLKKISGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPS 70
LL+ +++ + + K+ VL V+ ++ GEIV ++G SGSGKSTLL ++ GL +P+
Sbjct: 1 LLKCENLGKRYQEGKLD--TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT 58
Query: 71 SGQVLFKGKKI---------KDPPKDISVVFQTFALFPWLTVLENVELGLKAKGIDKEER 121
SG+VLF G+ + K K + ++Q L P T LENV + L +E
Sbjct: 59 SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEA 118
Query: 122 RKRALSAIDLIGLDGFESAHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAE 181
++RA ++ +GL+ + +E+SGG QRV ARA V PSL+L DEP LD A+
Sbjct: 119 KERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAK 178
Query: 182 NLRTDLIDLWIEGRLPIESMLMVTHNIEEAVLMCDRVLV 220
+ +++L E S L+VTH++E A + DRVL
Sbjct: 179 IIFDLMLELNRELNT---SFLVVTHDLELAKKL-DRVLE 213