RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01846
>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
Score = 91.3 bits (227), Expect = 5e-19
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 32 VLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKK--IKDPP---K 86
VL +N ++ GE +G++G SGSGKSTL +++ L +P GQVL G I DP +
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRR 531
Query: 87 DISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRKRA--LSAIDLI-----GLDGFES 139
+ VV Q LF ++ +N+ L G E A A D I G +
Sbjct: 532 QMGVVLQENVLFSR-SIRDNIALC--NPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVG 588
Query: 140 AHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIEGRLPIE 199
+SGG QR+ ARA V P +L+ DE SALD + + ++ ++ GR
Sbjct: 589 EKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREI-CRGR---- 643
Query: 200 SMLMVTHNIEEAVLMCDRVLVFSSNPGRIAEE 231
+++++ H + V CDR++V G+IAE
Sbjct: 644 TVIIIAHRL-STVRACDRIIVLEK--GQIAES 672