RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 68.4 bits (168), Expect = 4e-12
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 12 LEIQDICQSFSLKKISGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAG--LVSP 69
L+I+D+ S K+I L VN V GEI ++G +GSGKSTL + IAG
Sbjct: 1 LKIKDLHVSVEDKEI------LKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEV 54
Query: 70 SSGQVLFKGKKIKDPPKD------ISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRK 123
+SG +LFKG+ + + D + + FQ P ++ LE + L A+ + R +
Sbjct: 55 TSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNAR---RSARGE 111
Query: 124 RALSAIDLIGLDGFESAHTTEISGGMLQR---VGFA----------RAFVVFPSLLLMDE 170
L +D + L + L R GF+ + ++ P L ++DE
Sbjct: 112 EPLDLLDFLKLLK-AKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDE 170
Query: 171 PFSALDVLTAENLRTDLIDLWIEGRLPIESMLMVTHN--IEEAVLMCDRVLVFSSNPGRI 228
S LD+ A + + I+ R P S L++TH + + D V V GRI
Sbjct: 171 IDSGLDI-DALKIVAEGINRL---REPDRSFLIITHYQRLLNY-IKPDYVHVLLD--GRI 223
Query: 229 AEE 231
+
Sbjct: 224 VKS 226