RPSBLAST alignment for GI: 254780596 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 127 bits (322), Expect = 4e-30
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 12 LEIQDICQSFSLKKISGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSS 71
LE++++ + G +L V+ V GEIV LLGR+G+GK+TLL+ I GL+ P S
Sbjct: 1 LEVENLNAGY------GKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRS 54
Query: 72 GQVLFKGKKIKDPPKD------ISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRKRA 125
G + F G+ I P I V + +FP LTV EN+ LG A+ K + R
Sbjct: 55 GSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLER 114
Query: 126 LSAIDLIGLDGFESAHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRT 185
+ + L +SGG Q + ARA + P LLL+DEP L E +
Sbjct: 115 VYELFPR-LKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFE 173
Query: 186 DLIDLWIEGRLPIESMLMVTHNIEEAVLMCDRVLVFSSNPGRIAEE 231
+ +L EG ++L+V N A+ + DR V GR+ E
Sbjct: 174 AIRELRDEGV----TILLVEQNARFALEIADRAYVLER--GRVVLE 213