RPSBLAST alignment for GI: 254780596 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 187 bits (477), Expect = 5e-48
Identities = 90/208 (43%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 22 SLKKISGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKI 81
+ K +G + ++ V+ +V GEI ++G SGSGKSTLLR I L+ P+SG+VL G+ I
Sbjct: 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDI 88
Query: 82 KDPP---------KDISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRKRALSAIDLI 132
K IS+VFQ+FAL P TVLENV GL+ +G+ + ER +RA A++L+
Sbjct: 89 AAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELV 148
Query: 133 GLDGFESAHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWI 192
GL+G+E + E+SGGM QRVG ARA V P +LLMDE FSALD L ++ +L+ L
Sbjct: 149 GLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQA 208
Query: 193 EGRLPIESMLMVTHNIEEAVLMCDRVLV 220
E + ++++ +TH+++EA+ + DR+ +
Sbjct: 209 ELQ---KTIVFITHDLDEALRLGDRIAI 233