HHsearch alignment for GI: 254780598 and conserved domain: COG5338
>COG5338 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=94.69 E-value=0.019 Score=30.29 Aligned_cols=62 Identities=27% Similarity=0.189 Sum_probs=37.8
Q ss_pred CEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE
Q ss_conf 214899989754312767789885447764443134555677520479973466100488679
Q gi|254780598|r 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 (205)
Q Consensus 115 ~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~~~~~~~~~~g~~~G~Gvey~~it~~~~ 177 (205)
T Consensus 262 ~n~~s~~~R~gYelSPal~pf~e~~vgk~~YD~ridt~G~eRSs~~Y~~r~G~~~-D~gEk~~ 323 (468)
T COG5338 262 RNLASLTGRIGYELSPALIPFAEAEVGKRDYDTRIDTQGYERSSDGYGARVGAEF-DLGEKLR 323 (468)
T ss_pred CCCCEEEEECCEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCEEE-CHHHHHC
T ss_conf 4400023211123365422026762373102110244342234442000132466-0004216