HHsearch alignment for GI: 254780598 and conserved domain: pfam02264
>pfam02264 LamB LamB porin. Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.
Probab=90.24 E-value=0.97 Score=21.56 Aligned_cols=110 Identities=11% Similarity=-0.032 Sum_probs=62.4
Q ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCC----CCCEEEEEEE
Q ss_conf 379984510132155566662122321489998975431276778988544776444313455567----7520479973
Q gi|254780598|r 90 CIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT----PIAIGGTAGV 165 (205)
Q Consensus 90 ~~V~G~e~d~~~~~~~~~~~~~~~~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~~~~~~----~~~~g~~~G~ 165 (205)
T Consensus 273 ~~~~~~~~~yq~~~d~~~~~~~~~~~~-~s~~vRP~y~~~~~~~~~~E~Gy~~~~~~~~~~~~~~~~~~~K~TlApt~s~ 351 (399)
T pfam02264 273 NWEVAHALVYQRGNDIYSTADKGSYEW-YTVVVRPMYKWNQIMSTAFEGGYFNVKNKSTGGNDREDNGQYKLTLAQTWKV 351 (399)
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCEEE-EEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 753605355674234367778887479-9998677379657258999988988723667886435478368999640312
Q ss_pred EEEEECCCCCEEEEEEEEEEECCC---------CCCCCEEEEEEEEE
Q ss_conf 466100488679999999975056---------55662269999985
Q gi|254780598|r 166 GVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGM 203 (205)
Q Consensus 166 Gvey~~it~~~~~r~EY~y~df~~---------~~~~~~~~~~G~~y 203 (205)
T Consensus 352 g~~f-~--sRPelR~yaTy~~w~~~~~~~~~~~~~~~~~~~~fGvQ~ 395 (399)
T pfam02264 352 GSSF-W--ARPEIRFYATYLKWDEKEGKGNTFDSGNDDDEWTFGAQM 395 (399)
T ss_pred CCCC-C--CCCEEEEEEEEEECCCHHHCCCCCCCCCCCCCEEEEEEE
T ss_conf 7987-7--895799999997135012033665778877878999999