HHsearch alignment for GI: 254780598 and conserved domain: pfam02530
>pfam02530 Porin_2 Porin subfamily. This family consists of porins from the alpha subdivision of Proteobacteria the members of this family are related to pfam00267. The porins form large aqueous channels in the cell membrane allowing the selective entry of hydrophilic compounds this so called 'molecular sieve' is found in the cell walls of gram negative bacteria.
Probab=99.52 E-value=9.9e-13 Score=83.16 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=60.5
Q ss_pred CCEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECC-----------------------------------CCCCCCCCC
Q ss_conf 321489998975431276778988544776444313-----------------------------------455567752
Q gi|254780598|r 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-----------------------------------KAGEITPIA 158 (205)
Q Consensus 114 ~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~-----------------------------------~~~~~~~~~ 158 (205)
T Consensus 245 ~~~~~Av~~~~~~~~g~g~s~~l~g~Y~~ga~~Y~~~~~~~~~~~~Wav~~~~~~~~t~k~~~~~~~~~~~~~~~~~~d~ 324 (378)
T pfam02530 245 DKEEGAVRARLSVKAGDGDTLNIAGGYASGANRYTGDSEYHNWGGNWAVWAGYTYKATDKTAITPGAQWGGAGNVCNPDF 324 (378)
T ss_pred CCCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCCCCCCCCC
T ss_conf 54250448999998679845899999815874223554443467750377656862333089820337502454347775
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCC
Q ss_conf 0479973466100488679999999975056556
Q gi|254780598|r 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 (205)
Q Consensus 159 ~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~~ 192 (205)
T Consensus 325 ~~~~vg~nv~y-tpV~nl~~~~Ev~Yt~~d~k~~ 357 (378)
T pfam02530 325 DGWAVGANVDY-TIVDNLTFTAEVRYTDLGQKYF 357 (378)
T ss_pred CEEEEEEEEEE-EECCCEEEEEEEEEEECCCCCC
T ss_conf 42688887887-8809968978999974687445