HHsearch alignment for GI: 254780598 and conserved domain: pfam05736

>pfam05736 OprF OprF membrane domain. This domain represents the presumed membrane spanning region of the OprF proteins. This region is involved in channel formation and is thought to form an 8-stranded beta-barrel.

Probab=96.59  E-value=0.004  Score=33.81  Aligned_cols=86  Identities=13%  Similarity=0.052  Sum_probs=42.6

Q ss_pred             CCCEEEEEEEEEE-ECC----CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEEC
Q ss_conf             7602689985464-048----37998451013215556666212232148999897543127677898854477644431
Q gi|254780598|r   74 HNAGGSIFAGYNV-EDS----CIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET  148 (205)
Q Consensus        74 ~~~~~G~~~GYn~-q~~----~~V~G~e~d~~~~~~~~~~~~~~~~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~  148 (205)
T Consensus        89 ~g~~~rLDalYHF~~pg~~lrPYvs~G~gh~s~~~~~~g-~~Grd~sT~~N~G~G~Ky~itdn--~~aRa~vra~y----  161 (184)
T pfam05736        89 GGDLTSLDAQYHFGTPGDGLRPYVSAGFAHQSITNVADG-SQGRDQSTFANIGAGAKYYFTEN--FYARAGVEAQY----  161 (184)
T ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEECCCCCEEECCCCC-CCCCCCCEEEEECCCEEEEECCC--EEEEECHHHHC----
T ss_conf             563466777997389876633727731465200022568-77656441676345268996054--47761325310----


Q ss_pred             CCCCCCCCCCEEEEEEEEEE
Q ss_conf             34555677520479973466
Q gi|254780598|r  149 GKAGEITPIAIGGTAGVGVE  168 (205)
Q Consensus       149 ~~~~~~~~~~~g~~~G~Gve  168 (205)
T Consensus       162 -~-lD~~~~d~~a~vGl~~~  179 (184)
T pfam05736       162 -G-LDNGDWEWAALVGLGVN  179 (184)
T ss_pred             -C-CCCCCCCEEEEEEEEEE
T ss_conf             -4-77886120045524996