HHsearch alignment of GI: 254780598 and MMDB domain: 1qjp_A_
>1qjp_A (A:) Outer membrane protein A; HET: C8E; 1.65A {Escherichia coli}
Probab=99.89 E-value=1.3e-21 Score=128.41 Aligned_cols=151 Identities=21% Similarity=0.277 Sum_probs=119.9
Q ss_pred CCCCCCCCCCCCCCCCCCC--------CCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCC---CCEEEE
Q ss_conf 1542100012233334466--------77777602689985464048379984510132155566662122---321489
Q gi|254780598|r 51 HDFNGPYAGLSALYNGSFG--------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL---HGIGGS 119 (205)
Q Consensus 51 ~~w~G~y~g~~~g~~~~~~--------~~~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~~~~~~~~---~~~~~~ 119 (205)
.+|+++|+|+++|+..... ....+++..++.+||+++.+ +++|+.+.+............ ......
T Consensus 2 ~~~~~~yvg~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (171)
T 1qjp_A 2 PKDNTWYTGAKLGWSQYHDTGLINNNGPTHENKLGAGAFGGYQVNPY---VGFEMGYDWLGRMPYKGSVENGAYKAQGVQ 78 (171)
T ss_dssp CCTTEEEEEEEEEEEC-------------CCCEEEEEEEEEEEEETT---EEEEEEEEEEEECCC-------CEEEEEEE
T ss_pred CCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCC---EEEEEEEEECCCCCCCCCCCCCCEEEEEEE
T ss_conf 86797999998622995165332677631589738999999991587---899999996585320134544404878899
Q ss_pred EEEEEEEEECCCEEEEEEEEEEEEEEEECCC-CCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCC------CCC
Q ss_conf 9989754312767789885447764443134-555677520479973466100488679999999975056------556
Q gi|254780598|r 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------VEG 192 (205)
Q Consensus 120 ~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~-~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~------~~~ 192 (205)
+..+..+++.++++||+++|+++.+.+.+.. ....+++..++.+|+|++| .|+++|++++||||..+.+ .+.
T Consensus 79 ~~~~~~~~~~~~~~~y~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~y-~l~~~~~i~~e~~~~~~~~~~~~~~~~~ 157 (171)
T 1qjp_A 79 LTAKLGYPITDDLDIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDAHTIGTRP 157 (171)
T ss_dssp EEEEEEEESSSSEEEEEEEEEEEEEEEEECSSSCEEEEEEEEEEEEEEEEE-EEETTEEEEEEEEEEC------------
T ss_pred EEEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEE-EECCCEEEEEEEEEEECCCCCCCCCCCC
T ss_conf 999999814776147678636899621100246514467432588827999-9359979999999997258765544111
Q ss_pred CCEEEEEEEEEEC
Q ss_conf 6226999998539
Q gi|254780598|r 193 FYNTISLGVGMKF 205 (205)
Q Consensus 193 ~~~~~~~G~~ykF 205 (205)
+.+.+.+|++|||
T Consensus 158 ~~~~~~~G~~y~F 170 (171)
T 1qjp_A 158 DNGMLSLGVSYRF 170 (171)
T ss_dssp --CEEEEEEEEEC
T ss_pred CCCEEEEEEEEEC
T ss_conf 2458999999988