HHsearch results for GI: 254780598 and protein with PDBid: 1p4t_A
>1p4t_A Outer membrane protein NSPA; beta barrel; HET: CXE; 2.55A {Neisseria meningitidis} SCOP: f.4.1.1
Probab=99.91 E-value=1.3e-23 Score=137.92 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=112.2
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCC
Q ss_conf 421000122333344667-7777602689985464048379984510132155566662122321489998975431276
Q gi|254780598|r 53 FNGPYAGLSALYNGSFGE-EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 (205)
Q Consensus 53 w~G~y~g~~~g~~~~~~~-~~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~~~~~~~~~~~~~~~~~r~Gy~~~~~ 131 (205)
-+|||++.++++.....+ .+.+++.+++.+||+++ +| .+|+++.+...........+ .+...+.++..++..++
T Consensus 3 ~~Gfyv~~~~g~~~~~~~~~~~~g~~~~~~~GY~f~--~~--~~e~~y~~~~~~~~~~~~~~-~~~~~l~~~y~~~~~~~ 77 (155)
T 1p4t_A 3 ASGFYVQADAAHAKASSSLGSAKGFSPRISAGYRIN--DL--RFAVDYTRYKNYKAPSTDFK-LYSIGASAIYDFDTQSP 77 (155)
T ss_dssp CEEEEEEEEEEEEEEECSSCEEEEECCEEEEEEEET--TE--EEEEEEEEEEESSCCSSCCE-EEEEEEEEEEECCCSSS
T ss_pred CCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECC--CE--EEEEEEEEECCCCCCCCCEE-EEEEEEEEEEEECCCCC
T ss_conf 743389687547024467787885768999999827--99--99999998245567886357-89999999998436775
Q ss_pred EEEEEEEEEEEEEEEECCC-CCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC----CCCEEEEEEEEEEC
Q ss_conf 7789885447764443134-55567752047997346610048867999999997505655----66226999998539
Q gi|254780598|r 132 LLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF 205 (205)
Q Consensus 132 ~l~Y~~~G~a~~~~~~~~~-~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~----~~~~~~~~G~~ykF 205 (205)
+.||+++|+++++.+.... ....+++..+|.+|+|++| .|+|+|++++||||+++++++ .+.|++++|+.|||
T Consensus 78 ~~py~~~G~g~~~~~~~~~~~~~~~~~~~~~~~g~G~~y-~~~~~~~~~~ey~y~~~~~~~~~~~~~~~~~~~Gl~Y~F 155 (155)
T 1p4t_A 78 VKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSY-AVTPNVDLDAGYRYNYIGKVNTVKNVRSGELSAGVRVKF 155 (155)
T ss_dssp EEEEEEEEEEEEEEEEEETTEEEECCCEEEEEEEEEEEE-EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEE-EECCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEC
T ss_conf 779999657899987143330014785060475114999-717899999999998767876674300369999999999