HHsearch results for GI: 254780598 and protein with PDBid: 2f1v_A

>2f1v_A Outer membrane protein W; outer membrane protein beta barrel; 2.70A {Escherichia coli K12} PDB: 2f1t_A
Probab=99.80  E-value=1.3e-18  Score=112.29  Aligned_cols=129  Identities=13%  Similarity=0.033  Sum_probs=83.9

Q ss_pred             CCCCCEEEEEEEEEEECCCEEEEEEEEEEECCC---CCCCCCCCC----CCEEEEEEEEEEEEECCCEEEEEEEEEEEEE
Q ss_conf             777602689985464048379984510132155---566662122----3214899989754312767789885447764
Q gi|254780598|r   72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP---VLADNIHSL----HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ  144 (205)
Q Consensus        72 ~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~---~~~~~~~~~----~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~  144 (205)
                      .+++...|+.+||+++....   +|..+.+...   .........    .......+.+.. ...+++.||+.+|+.+..
T Consensus        33 ~~~~~~~g~~~gY~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pY~g~G~g~~~  108 (197)
T 2f1v_A           33 VTNNTQLGLTFTYMATDNIG---VELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFG-DASSKFRPYVGAGINYTT  108 (197)
T ss_dssp             ECCEEEEEEEEEEESSSSEE---EEEEEESCEEEEEEETTTEEEEEEEEECCEEEEEEECS-CTTCSEEEEEEEEEEEEE
T ss_pred             ECCCEEEEEEEEEEEECCEE---EEEEEEECCCEEECCCCCCCCCEEEECCCEEEEEEEEC-CCCCCEEEEEEECCEEEE
T ss_conf             76870887998999607616---88987754520423445465321775072899998743-678728998972025799


Q ss_pred             EEECCCC---------CCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCC--------------CCCCCEEEEEEE
Q ss_conf             4431345---------55677520479973466100488679999999975056--------------556622699999
Q gi|254780598|r  145 KYETGKA---------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--------------VEGFYNTISLGV  201 (205)
Q Consensus       145 ~~~~~~~---------~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~--------------~~~~~~~~~~G~  201 (205)
                      .+.+...         ....++.++|.+|+|+|| +|+|||++++||||+++++              ++.+.+.+++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~G~~Y-~i~~~~sl~~eyry~~~~~~~~~~~~~~~~~~~~~~d~~~~~~Gv  187 (197)
T 2f1v_A          109 FFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDY-LINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSA  187 (197)
T ss_dssp             EEEEEECHHHHHTTEEEEEECCEEEEEEEEEEEE-ECSSSEEEEEEEEEECCEEEEEEEESSCCCCEEEECCCEEEEEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEE-EECCCEEEEEEEEEEECCCCEEEECCCCCEEEEEEECCEEEEEEE
T ss_conf             9731035676310111245466387899624899-917983999999999755605784288620005863725999989


Q ss_pred             EEEC
Q ss_conf             8539
Q gi|254780598|r  202 GMKF  205 (205)
Q Consensus       202 ~ykF  205 (205)
                      +|||
T Consensus       188 ~YrF  191 (197)
T 2f1v_A          188 GYRF  191 (197)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9996