HHsearch results for GI: 254780598 and protein with PDBid: 2f1v_A
>2f1v_A Outer membrane protein W; outer membrane protein beta barrel; 2.70A {Escherichia coli K12} PDB: 2f1t_A
Probab=99.80 E-value=1.3e-18 Score=112.29 Aligned_cols=129 Identities=13% Similarity=0.033 Sum_probs=83.9
Q ss_pred CCCCCEEEEEEEEEEECCCEEEEEEEEEEECCC---CCCCCCCCC----CCEEEEEEEEEEEEECCCEEEEEEEEEEEEE
Q ss_conf 777602689985464048379984510132155---566662122----3214899989754312767789885447764
Q gi|254780598|r 72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP---VLADNIHSL----HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 (205)
Q Consensus 72 ~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~---~~~~~~~~~----~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~ 144 (205)
.+++...|+.+||+++.... +|..+.+... ......... .......+.+.. ...+++.||+.+|+.+..
T Consensus 33 ~~~~~~~g~~~gY~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pY~g~G~g~~~ 108 (197)
T 2f1v_A 33 VTNNTQLGLTFTYMATDNIG---VELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFG-DASSKFRPYVGAGINYTT 108 (197)
T ss_dssp ECCEEEEEEEEEEESSSSEE---EEEEEESCEEEEEEETTTEEEEEEEEECCEEEEEEECS-CTTCSEEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEEECCEE---EEEEEEECCCEEECCCCCCCCCEEEECCCEEEEEEEEC-CCCCCEEEEEEECCEEEE
T ss_conf 76870887998999607616---88987754520423445465321775072899998743-678728998972025799
Q ss_pred EEECCCC---------CCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCC--------------CCCCCEEEEEEE
Q ss_conf 4431345---------55677520479973466100488679999999975056--------------556622699999
Q gi|254780598|r 145 KYETGKA---------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--------------VEGFYNTISLGV 201 (205)
Q Consensus 145 ~~~~~~~---------~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~--------------~~~~~~~~~~G~ 201 (205)
.+.+... ....++.++|.+|+|+|| +|+|||++++||||+++++ ++.+.+.+++||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~G~~Y-~i~~~~sl~~eyry~~~~~~~~~~~~~~~~~~~~~~d~~~~~~Gv 187 (197)
T 2f1v_A 109 FFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDY-LINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSA 187 (197)
T ss_dssp EEEEEECHHHHHTTEEEEEECCEEEEEEEEEEEE-ECSSSEEEEEEEEEECCEEEEEEEESSCCCCEEEECCCEEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEE-EECCCEEEEEEEEEEECCCCEEEECCCCCEEEEEEECCEEEEEEE
T ss_conf 9731035676310111245466387899624899-917983999999999755605784288620005863725999989
Q ss_pred EEEC
Q ss_conf 8539
Q gi|254780598|r 202 GMKF 205 (205)
Q Consensus 202 ~ykF 205 (205)
+|||
T Consensus 188 ~YrF 191 (197)
T 2f1v_A 188 GYRF 191 (197)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9996