HHsearch results for GI: 254780598 and protein with PDBid: 3dwn_A
>3dwn_A Long-chain fatty acid transport protein; beta barrel, outer membrane protein, lipid transport, membrane, outer membrane, phage recognition; HET: LDA; 2.50A {Escherichia coli} PDB: 1t16_A* 1t1l_A* 2r4p_A* 2r4n_A* 2r4l_A* 2r4o_A* 2r89_A 2r8a_A* 2r88_A
Probab=97.65 E-value=0.0015 Score=34.90 Aligned_cols=85 Identities=9% Similarity=0.003 Sum_probs=46.6
Q ss_pred EEEEEEEEEEECCCEEEEEEEEEEEEEEEECCCCCC-CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC-----
Q ss_conf 899989754312767789885447764443134555-67752047997346610048867999999997505655-----
Q gi|254780598|r 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----- 191 (205)
Q Consensus 118 ~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~~~~-~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~----- 191 (205)
..++.-+.|.+++++- .++|+++.+.-....... .......+.+++|+.| .++++|.+.+.|+|....+++
T Consensus 325 ~~~~~G~ey~~~~~l~--lRaG~~y~~sp~~~~~~~~~~p~~~~~~~s~G~~~-~~~~~~~id~~y~y~~~~~~~~~~~~ 401 (427)
T 3dwn_A 325 YRIALGTTYYYDDNWT--FRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTY-AFNKDASVDVGVSYMHGQSVKINEGP 401 (427)
T ss_dssp EEEEEEEEECCSSSEE--EEEEEEEECCCCCGGGCCTTSCCCCEEEEEEEEEE-ESSSSEEEEEEEEEEEECCEEEEETT
T ss_pred EEEEEEEEEECCCCEE--EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEE-ECCCCEEEEEEEEEEECCCCEECCCC
T ss_conf 8999999999289889--99999976678786652432456798899988989-81898099999999985752050674
Q ss_pred ------CCCEEEEEEEEEEC
Q ss_conf ------66226999998539
Q gi|254780598|r 192 ------GFYNTISLGVGMKF 205 (205)
Q Consensus 192 ------~~~~~~~~G~~ykF 205 (205)
...+.+.++++|||
T Consensus 402 ~~~~~~~~~~~~~~~~~y~F 421 (427)
T 3dwn_A 402 YQFESEGKAWLFGTNFNYAF 421 (427)
T ss_dssp EEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEEEEEEEE
T ss_conf 15788768999999999996