HHSEARCH alignment of GI: 254780598 and SCOP domain: d1i78a_

Alignment
>d1i78a_ f.4.4.1 (A:) Outer membrane protease OMPT {Escherichia coli [TaxId: 562]}
Probab=97.48  E-value=0.0015  Score=33.62  Aligned_cols=129  Identities=12%  Similarity=0.024  Sum_probs=65.7

Q ss_pred             CCEEEEEEEEEEECCCEE-EEEEEEEEECCCCCCC---------CCCCCCCEEE-EEEEEEEEEECCCEEEEEEEEEE-E
Q ss_conf             602689985464048379-9845101321555666---------6212232148-99989754312767789885447-7
Q gi|254780598|r   75 NAGGSIFAGYNVEDSCIM-YGVEGDVRYTVPVLAD---------NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPD-V  142 (205)
Q Consensus        75 ~~~~G~~~GYn~q~~~~V-~G~e~d~~~~~~~~~~---------~~~~~~~~~~-~~~~r~Gy~~~~~~l~Y~~~G~a-~  142 (205)
                      +...++++||+++.-.|- .|.-.-+........+         ...-++.|.+ -+.....|.+ +++.+-+...+. +
T Consensus       125 ~y~lg~~~Gyqy~~~~wtAyGGsy~y~~~~~~r~~~g~~p~~~~~ItY~q~~~~~yiGL~g~y~~-~~~~f~~~l~ys~w  203 (297)
T d1i78a_         125 NYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRY-EDFELGGTFKYSGW  203 (297)
T ss_dssp             SEEEEEEEEEEEEEEEEEEECCEEEBCCTTCSSCBCCBCCTTCSEEEEEEEEEEEEEEEEEEEEE-TTEEEEEEEEEEEE
T ss_pred             CEEEEEEEEEEEEECCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEE-CCEEEEEEEEECEE
T ss_conf             75897773148752436734754783798876543465678862677776876778867789980-66599888850314


Q ss_pred             EEEEEC---------CCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC----------------------
Q ss_conf             644431---------3455567752047997346610048867999999997505655----------------------
Q gi|254780598|r  143 AQKYET---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------------------  191 (205)
Q Consensus       143 ~~~~~~---------~~~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~----------------------  191 (205)
                      .+.+..         .......+...+|.+.+.++| .|||++++-+|++|..+...+                      
T Consensus       204 v~a~d~D~H~lR~~~~~f~~~~~~~~~~~v~~~a~Y-~vt~~~s~~ve~~y~~~~~~~G~t~~~~~~tg~ss~~~d~ag~  282 (297)
T d1i78a_         204 VESSDNDEHYDPKGRITYRSKVKDQNYYSVAVNAGY-YVTPNAKVYVEGAWNRVTNKKGNTSLYDHNNNTSDYSKNGAGI  282 (297)
T ss_dssp             EEEEEEEEEECSSSCEEEEEEEEEEEEEEEEEEEEE-EEETTEEEEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred             EECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEE-EECCCEEEEEEEEEEEEEEECCCCEEEECCCCEEEECCCCCCC
T ss_conf             303788422003577544303688657999998879-9789879999999999980148638996588726731575571


Q ss_pred             -CCCEEEEEEEEEEC
Q ss_conf             -66226999998539
Q gi|254780598|r  192 -GFYNTISLGVGMKF  205 (205)
Q Consensus       192 -~~~~~~~~G~~ykF  205 (205)
                       ...-++++|+-|||
T Consensus       283 ~~~~~tis~Gl~y~F  297 (297)
T d1i78a_         283 ENYNFITTAGLKYTF  297 (297)
T ss_dssp             EEEEEEEEEEEEEEC
T ss_pred             EECCEEEEEEEEEEC
T ss_conf             201429998445659


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: OMPT-like
family: Outer membrane protease OMPT
domain: Outer membrane protease OMPT
species: Escherichia coli [TaxId: 562]