HHSEARCH alignment of GI: 254780598 and SCOP domain: d1t16a_

Alignment
>d1t16a_ f.4.3.4 (A:) Long-chain fatty acid transport protein FadL {Escherichia coli [TaxId: 562]}
Probab=97.75  E-value=0.00058  Score=35.77  Aligned_cols=49  Identities=10%  Similarity=-0.034  Sum_probs=35.9

Q ss_pred             CCCEEEEEEEEEEEECCCCCEEEEEEEEEEECC---------CCCCCCEEEEEEEEEEC
Q ss_conf             752047997346610048867999999997505---------65566226999998539
Q gi|254780598|r  156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYS---------KVEGFYNTISLGVGMKF  205 (205)
Q Consensus       156 ~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~---------~~~~~~~~~~~G~~ykF  205 (205)
                      ..+..+++.+|+|| .++++|.+|+-|.|..=.         ..+.+.+.+++|++|+|
T Consensus       320 ~~~~~~~~~~G~ey-~~~~~l~lR~Gy~y~~~~~~~~~~~~~~p~~~~~~~s~G~~~~~  377 (427)
T d1t16a_         320 GFKDAYRIALGTTY-YYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAF  377 (427)
T ss_dssp             CCCCEEEEEEEEEE-CCSSSEEEEEEEEEECCSSCTTTCCSSSCCCCEEEEEEEEEEES
T ss_pred             CCCCEEEEEEEEEE-EECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
T ss_conf             53314899987899-83566999999997467777655464346789889998898984


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: Porins
family: Outer membrane protein transport protein
domain: Long-chain fatty acid transport protein FadL
species: Escherichia coli [TaxId: 562]