HHSEARCH alignment of GI: 254780598 and SCOP domain: d2pora_

Alignment
>d2pora_ f.4.3.1 (A:) Porin {Rhodobacter capsulatus [TaxId: 1061]}
Probab=97.15  E-value=0.0038  Score=31.58  Aligned_cols=40  Identities=20%  Similarity=0.182  Sum_probs=34.0

Q ss_pred             EEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEC
Q ss_conf             99734661004886799999999750565566226999998539
Q gi|254780598|r  162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF  205 (205)
Q Consensus       162 ~~G~Gvey~~it~~~~~r~EY~y~df~~~~~~~~~~~~G~~ykF  205 (205)
                      .+++|++| .|++++.+.++|.+.+..+   +.+.+.+||.|+|
T Consensus       262 ~~~lG~~Y-~Lsk~t~ly~~y~~~~~d~---~~~~~~~G~~~~F  301 (301)
T d2pora_         262 YYGLGASY-DLGGGASIVGGIADNDLPN---SDMVADLGVKFKF  301 (301)
T ss_dssp             EEEEEEEE-EEETTEEEEEEEEEECSSS---CCCEEEEEEEEEC
T ss_pred             EEEEEEEE-ECCCCEEEEEEEEEEECCC---CCEEEEEEEEEEC
T ss_conf             99999999-7899979999999983589---8737999649989


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: Porins
family: Porin
domain: Porin
species: Rhodobacter capsulatus [TaxId: 1061]