HHsearch alignment for GI: 254780600 and conserved domain: TIGR00560

>TIGR00560 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; InterPro: IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (2.7.8.5 from EC), also known as phosphatidylglycerophosphate synthase, glycerophosphate phosphatidyltransferase and PGP synthase, catalyses the conversion ofCDP-diacylglycerol and glycerol-3-phosphate to CMP and 3-(3-phosphatidyl)-glycerol 1-phosphate in the commited step to the synthesis of acidic phospholipids. It is an integral membrane protein. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharomyces cerevisiae (Baker's yeast) YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.; GO: 0008444 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity, 0008654 phospholipid biosynthetic process, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=310.22  Aligned_cols=188  Identities=37%  Similarity=0.613  Sum_probs=159.0

Q ss_pred             CCHHHHHHHHHH-HHHHHHHHHHHHCCCCCCC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             016479999999-9999999999852445545---------421479999999999999986649999971871256888
Q gi|254780600|r    6 YNIPNMLTYGRI-LVVPLIVLCFFIQEIGSFT---------SPNLMRWIALSLFTIASITDFFDGYLARVWNQTSNIGRM   75 (200)
Q Consensus         6 ~~lpN~lT~~Ri-~l~p~~~~~~~~~~~~~~~---------~~~~~~~~a~~lf~~a~~tD~lDG~iAR~~n~~S~~G~~   75 (200)
T Consensus         1 ~~~Pn~lT~~Ri~~~~p~~~l~~l~~~~~~~~~~~vG~~~~~~~~~~~~~~~lF~~A~~TDwlDGYlARk~~~vs~fGk~   80 (217)
T TIGR00560         1 KNIPNWLTLFRIFILLPLFILIFLENLLGVLAEFGVGAVVLPIQVSLFIGGLLFLIAAVTDWLDGYLARKWNLVSNFGKF   80 (217)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             97607999999999999999996320021100222130002387998999999999979877789999996021212346


Q ss_pred             HHHHHHHHHHHH--HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHH--H
Q ss_conf             998998876554--6789886433104741123454234554334567885206-6663025688999999999999--9
Q gi|254780600|r   76 LDPIADKLLISS--VLLLMTADGTINRYSIWAAITILCREILVSGLREYLAELK-VSVPVTRIARFKTGIQMISIGF--L  150 (200)
Q Consensus        76 lDp~aDki~~~~--~~~~l~~~~~~~~~~~w~~ilii~Rei~i~~lr~~~~~~~-~~i~~~~~GK~kT~~q~~~i~~--~  150 (200)
T Consensus        81 lDPlADK~lv~~a~~Li~l~~~~~~---~~~~~~vii~RE~~i~glR~~~~~~~~~~~~aN~lGK~KT~~Q~vAi~~SlL  157 (217)
T TIGR00560        81 LDPLADKVLVLAALVLIILVYHGYV---PAWFVIVIIARELVISGLRVLAAEKGKEVIAANWLGKWKTVAQMVAIAASLL  157 (217)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             4028769999999999999998799---9999999999999999999999980882010302007999999999999998


Q ss_pred             HHHHHCC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             9642001--------------110389999999999999999999999999999951015
Q gi|254780600|r  151 LAGPACE--------------NQTSYITGTGIILLWISALLTIYSGYDYFRVGIKHIDSE  196 (200)
Q Consensus       151 L~~~~~~--------------~~~~~~~~~~~~~~~ia~~lti~Sg~~Y~~~~~~~~~~~  196 (200)
T Consensus       158 l~~~~~~nftesvqnf~~~~l~~~~~~~~~~~~~~~~A~~ltl~S~~~Y~~~~~~~lk~~  217 (217)
T TIGR00560       158 LWSLNQLNFTESVQNFESYSLNFKLFFELIAQLLYYIAAVLTLVSGIEYLIKIYKSLKDE  217 (217)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             315433567889999999999988999999999999999999999999999999965039