HHsearch alignment for GI: 254780601 and conserved domain: COG1205
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].
Probab=100.00 E-value=3.2e-38 Score=276.24 Aligned_cols=350 Identities=21% Similarity=0.237 Sum_probs=249.7
Q ss_pred CCCCC-CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
Q ss_conf 77799-88999999978798789899999999975996999928987468999999999861042122556882799984
Q gi|254780601|r 3 IFENI-PQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIA 81 (573)
Q Consensus 3 ~f~~l-~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~ 81 (573)
T Consensus 50 ~~~~~~~~~l~~~l~~~g~~~lY~HQ~~A~~~~~~G~~vvVtTgTgSGKTe~FllPIld~~l~~~~a-------~AL~lY 122 (851)
T COG1205 50 EFPELRDESLKSALVKAGIERLYSHQVDALRLIREGRNVVVTTGTGSGKTESFLLPILDHLLRDPSA-------RALLLY 122 (851)
T ss_pred CCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC-------EEEEEE
T ss_conf 6522200378899997434420077999999997799889978998854589899999998308665-------089980
Q ss_pred CCHHHHHHHHHHHHHHHHHCC--CEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCC----CCCCCCEEEEEE
Q ss_conf 998999999999999854469--87999988998799999612897599822310133210001----224643189996
Q gi|254780601|r 82 PTRELAVQVGRELEWLYAKTG--VVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKG----LNISHLKAVVLD 155 (573)
Q Consensus 82 PTrELa~Qv~~~~~~l~~~~~--~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~----l~l~~v~~lVlD 155 (573)
T Consensus 123 PtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~~~~Lk~lVvD 202 (851)
T COG1205 123 PTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWLLRNLKYLVVD 202 (851)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCHHHHHHCCCEEEEE
T ss_conf 43776766999999999847875135443488967888998738997898388999898636882278887327589984
Q ss_pred CCCCCCCCHHHHHHHH-------HHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCC-
Q ss_conf 1311001001235788-------87521433422563111122200111121012333323332325665200000000-
Q gi|254780601|r 156 EADEMLDLGFRDDIEF-------ILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVA- 227 (573)
Q Consensus 156 EaD~ml~~gf~~~i~~-------i~~~~p~~~q~~l~SAT~~~~i~~l~~~~~~~p~~i~~~~~~~~~~~i~~~~~~v~- 227 (573)
T Consensus 203 ElHt-YrGv~GS~vA~llRRL~~~~~~~~~~~q~i~~SAT~~np-~e~~~~l~~~~f~~~v~~~g~-~~~~~~~~~~~p~ 279 (851)
T COG1205 203 ELHT-YRGVQGSEVALLLRRLLRRLRRYGSPLQIICTSATLANP-GEFAEELFGRDFEVPVDEDGS-PRGLRYFVRREPP 279 (851)
T ss_pred CCEE-CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH-HHHHHHHCCCCCEEECCCCCC-CCCCEEEEEECCC
T ss_conf 4412-156037889999999999972458996289983124682-889998628721463147888-8787489985685
Q ss_pred -----C---CHHHHHHHHCCC--CCCCCEEEEECCCHHHHHHHH----HHHHHCC----CCCCCCCCCCCHHHHHHHHHH
Q ss_conf -----0---002455420010--235641677513023345655----5554226----663010489999999999866
Q gi|254780601|r 228 -----L---SDRDNAIVNILR--YHGAKNAIVFCSTRASVSRFT----KVLAEHL----FQVVALSGELSQQERSNALQM 289 (573)
Q Consensus 228 -----~---~~k~~~l~~ll~--~~~~~~~ivF~~t~~~~~~l~----~~L~~~g----~~~~~lhg~~~q~~R~~~~~~ 289 (573)
T Consensus 280 ~~~~~~~~r~s~~~~~~~~~~~~~~~~~~tL~F~~sr~~~e~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~er~~ie~~ 359 (851)
T COG1205 280 IRELAESIRRSALAELATLAALLVRNGIQTLVFFRSRKQVELLYLSPRRRLVREGGKLLDAVSTYRAGLHREERRRIEAE 359 (851)
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHHHH
T ss_conf 11332211234577999999999876965999983575678875415788754060103313423366999999999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCC-CHHHHHHHHCCCCCCCCCCEEEEEEC--HHHHHHHHHHHHH
Q ss_conf 5448814998538650014578873389705887-47899986030103788860256405--9999999999998
Q gi|254780601|r 290 MRDGRARVCIATDVAARGIDLPDLELVIHAELSS-NPENLLHRSGRTGRAGRKGMSVFVIP--QNMQRRAERLFRE 362 (573)
Q Consensus 290 fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~-~~~~yvHR~GRtgRag~~G~ai~l~~--~~e~~~~~~i~~~ 362 (573)
T Consensus 360 ~~~g~~~~~~st~AlelgidiG~ldavi~~g~P~~s~~~~~Q~~GRaGR~~~~~l~~~v~~~~~~d~yy~~~p~~~ 435 (851)
T COG1205 360 FKEGELLGVIATNALELGIDIGSLDAVIAYGYPGVSVLSFRQRAGRAGRRGQESLVLVVLRSDPLDSYYLRHPEEL 435 (851)
T ss_pred HHCCCCCEEEECHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHCCHHH
T ss_conf 7468841786121012265670211453048897028889886110358878753799837884004455083756